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Does not start on Darwin/macOS 10.13 #68

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zoenglinghou opened this issue Nov 25, 2017 · 5 comments
Open

Does not start on Darwin/macOS 10.13 #68

zoenglinghou opened this issue Nov 25, 2017 · 5 comments

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@zoenglinghou
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Hi, thanks for making this app.

I tried to open the app, but only got the following errors.

I am not sure what happened, but I did installed all the run time dependencies.

Thanks you!

Process:               nip2-bin [35558]
Path:                  /Applications/nip2-8.5.1.app/Contents/MacOS/nip2
Identifier:            uk.ac.soton.ecs.vips
Version:               ???
Code Type:             X86-64 (Native)
Parent Process:        ??? [1]
Responsible:           nip2-bin [35558]
User ID:               502

Date/Time:             2017-11-25 12:03:06.489 -0800
OS Version:            Mac OS X 10.13.1 (17B48)
Report Version:        12
Anonymous UUID:        BBBFD8A8-7049-8CB6-6DC8-42C874290DE8

Sleep/Wake UUID:       3665F56E-BE60-4BA2-A89D-007693E35BF1

Time Awake Since Boot: 430000 seconds
Time Since Wake:       4200 seconds

Crashed Thread:        0

Exception Type:        EXC_CRASH (SIGABRT)
Exception Codes:       0x0000000000000000, 0x0000000000000000
Exception Note:        EXC_CORPSE_NOTIFY

Termination Reason:    DYLD, [0x4] Symbol missing

Application Specific Information:
dyld: launch, loading dependent libraries
DYLD_LIBRARY_PATH=/Applications/nip2-8.5.1.app/Contents/Resources/lib

Dyld Error Message:
  Symbol not found: _inflateValidate
  Referenced from: /System/Library/Frameworks/ImageIO.framework/Versions/A/Resources/libPng.dylib
  Expected in: /Applications/nip2-8.5.1.app/Contents/Resources/lib/libz.1.dylib
 in /System/Library/Frameworks/ImageIO.framework/Versions/A/Resources/libPng.dylib

Binary Images:
       0x105ed3000 -        0x105fabfff +nip2-bin (???) <0A593822-F7D6-3236-9D11-2160738368CA> /Applications/nip2-8.5.1.app/Contents/MacOS/nip2-bin
       0x1062dd000 -        0x1064d6ff7 +libgsl.0.dylib (18) <9CCAE6A8-51CD-3217-BB00-397116CC9924> /Applications/nip2-8.5.1.app/Contents/Resources/lib/libgsl.0.dylib
       0x106534000 -        0x10657aff7 +libgslcblas.0.dylib (1) <5853B711-E41B-3B35-B710-7AC812D3953B> /Applications/nip2-8.5.1.app/Contents/Resources/lib/libgslcblas.0.dylib
       0x10657e000 -        0x106678fff +libgoffice-0.8.8.dylib (9.17) <1E3A22E9-1D88-381E-A412-6CD0878072EB> /Applications/nip2-8.5.1.app/Contents/Resources/lib/libgoffice-0.8.8.dylib
       0x1066cf000 -        0x106704ff7 +libgsf-1.114.dylib (115.41) <E3E3B76A-714B-3C8C-BFA8-8436F034FF1E> /Applications/nip2-8.5.1.app/Contents/Resources/lib/libgsf-1.114.dylib
       0x10671e000 -        0x106807fff +libfftw3.3.dylib (8.4) <845FD96D-E1EE-331E-8A44-648748EF8206> /Applications/nip2-8.5.1.app/Contents/Resources/lib/libfftw3.3.dylib
       0x106824000 -        0x106827fff +libgmodule-2.0.0.dylib (4801) <8F999F90-34D1-3EBD-81A8-3A8F33675F98> /Applications/nip2-8.5.1.app/Contents/Resources/lib/libgmodule-2.0.0.dylib
       0x10682a000 -        0x10682cfff +libgthread-2.0.0.dylib (4801) <5D3BF187-3FE2-3E98-B21C-BA40F9F701CA> /Applications/nip2-8.5.1.app/Contents/Resources/lib/libgthread-2.0.0.dylib
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       0x106c9b000 -        0x106d22fff +libgdk-quartz-2.0.0.dylib (2401.30) <02377521-FB47-31F4-B681-620F82BD4963> /Applications/nip2-8.5.1.app/Contents/Resources/lib/libgdk-quartz-2.0.0.dylib
       0x106d4d000 -        0x106d5cff7 +libpangocairo-1.0.0.dylib (3801.1) <8C12CAEE-6410-38F1-8201-6BCBE59F045C> /Applications/nip2-8.5.1.app/Contents/Resources/lib/libpangocairo-1.0.0.dylib
       0x106d6e000 -        0x106daefff +libpango-1.0.0.dylib (3801.1) <EDA17E4C-CC24-3CF2-804A-B5767743530F> /Applications/nip2-8.5.1.app/Contents/Resources/lib/libpango-1.0.0.dylib
       0x106dc7000 -        0x106de3ff7 +libatk-1.0.0.dylib (22010.1) <24CA4C2B-A874-383D-9233-46A535554012> /Applications/nip2-8.5.1.app/Contents/Resources/lib/libatk-1.0.0.dylib
       0x106df7000 -        0x106ec9fff +libcairo.2.dylib (11403.6) <B2D2ED29-0ED4-351F-BF01-29CFAF791DA7> /Applications/nip2-8.5.1.app/Contents/Resources/lib/libcairo.2.dylib
       0x106ef3000 -        0x106f0dfff +libgdk_pixbuf-2.0.0.dylib (3401) <02C9A421-F9DB-3F0C-BDC3-727B77748EDD> /Applications/nip2-8.5.1.app/Contents/Resources/lib/libgdk_pixbuf-2.0.0.dylib
       0x106f17000 -        0x107050fff +libgio-2.0.0.dylib (4801) <1003264A-A028-354B-94EA-E680304883A5> /Applications/nip2-8.5.1.app/Contents/Resources/lib/libgio-2.0.0.dylib
       0x1070b9000 -        0x107208fff +libxml2.2.dylib (12.4) <5A27EDF9-428F-3A8B-A585-012575EDE3A1> /Applications/nip2-8.5.1.app/Contents/Resources/lib/libxml2.2.dylib
       0x10723a000 -        0x107565fff +libvips.42.dylib (50.2) <896F0B5B-AC77-305B-9CB1-2DE10A488E6F> /Applications/nip2-8.5.1.app/Contents/Resources/lib/libvips.42.dylib
       0x107825000 -        0x107862ff7 +libgobject-2.0.0.dylib (4801) <48B961F6-C10B-3E81-9247-AF7106FD9E3E> /Applications/nip2-8.5.1.app/Contents/Resources/lib/libgobject-2.0.0.dylib
       0x10787a000 -        0x107997fff +libglib-2.0.0.dylib (4801) <ECE8D79F-F2AB-34A5-9007-70148BA8FE8E> /Applications/nip2-8.5.1.app/Contents/Resources/lib/libglib-2.0.0.dylib
       0x1079c0000 -        0x1079cafff +libintl.9.dylib (11.4) <47E2AC50-B060-39D3-9C54-F7E10DD3EC32> /Applications/nip2-8.5.1.app/Contents/Resources/lib/libintl.9.dylib
       0x1079d5000 -        0x1079fcff7 +libpcre.1.dylib (4.6) <97F8C5B7-D3E8-355A-8AB3-AAAC2718FEB0> /Applications/nip2-8.5.1.app/Contents/Resources/lib/libpcre.1.dylib
       0x107a07000 -        0x107a1bfff +libz.1.dylib (1.2.8) <806BF3AB-02C9-3B73-98DA-31BA8A910708> /Applications/nip2-8.5.1.app/Contents/Resources/lib/libz.1.dylib
       0x107a26000 -        0x107a47ff7 +liblzma.5.dylib (8.1) <FD162477-105F-3955-B8D3-DA40DD225D08> /Applications/nip2-8.5.1.app/Contents/Resources/lib/liblzma.5.dylib
       0x107a53000 -        0x107a58fff +libffi.6.dylib (7.4) <8DBAC6FA-E8A1-37D7-BD0A-2A527D0BD57F> /Applications/nip2-8.5.1.app/Contents/Resources/lib/libffi.6.dylib
       0x107a5f000 -        0x107a99ff7 +libfontconfig.1.dylib (10) <420DD4EB-6BF2-3FBD-923B-9A5736CEF0CA> /Applications/nip2-8.5.1.app/Contents/Resources/lib/libfontconfig.1.dylib
       0x107aa5000 -        0x107b33fff +libfreetype.6.dylib (18.2) <A9AA4F74-102F-3F91-8EBC-92239A7FE996> /Applications/nip2-8.5.1.app/Contents/Resources/lib/libfreetype.6.dylib
       0x107b48000 -        0x107bcffff +libpixman-1.0.dylib (35) <8F2D4988-883F-3C30-9C61-CF7CA9DA4131> /Applications/nip2-8.5.1.app/Contents/Resources/lib/libpixman-1.0.dylib
       0x107be3000 -        0x107c14ff7 +libpng16.16.dylib (42) <B1B1B87E-CECF-3AED-A177-C66316B5418F> /Applications/nip2-8.5.1.app/Contents/Resources/lib/libpng16.16.dylib
       0x107c1e000 -        0x107c42fff +libexpat.1.dylib (8) <0F2BA5D8-E8B5-38C9-86BF-553B2E5B0FB3> /Applications/nip2-8.5.1.app/Contents/Resources/lib/libexpat.1.dylib
       0x107c49000 -        0x107f10ff7 +libMagickCore-6.Q16.2.dylib (3) <89647D9B-FC7F-3CAA-BB59-9EAD69779C7A> /Applications/nip2-8.5.1.app/Contents/Resources/lib/libMagickCore-6.Q16.2.dylib
       0x107fe4000 -        0x108044fff +libtiff.5.dylib (8.5) <8581E5C0-5958-3AA2-87EA-3A11ACD720A4> /Applications/nip2-8.5.1.app/Contents/Resources/lib/libtiff.5.dylib
       0x108057000 -        0x1080a3fff +libjpeg.62.dylib (65) <9E710C48-80E4-3A7A-97D2-CB577212DD82> /Applications/nip2-8.5.1.app/Contents/Resources/lib/libjpeg.62.dylib
       0x1080ad000 -        0x1080bdff7 +libpangoft2-1.0.0.dylib (3801.1) <78636508-4341-3CB2-B0A2-7A4BCB2B0EBB> /Applications/nip2-8.5.1.app/Contents/Resources/lib/libpangoft2-1.0.0.dylib
       0x1080c8000 -        0x10814bff7 +liborc-0.4.0.dylib (26) <0126E622-512E-3491-A666-C3A0B2FB5AD7> /Applications/nip2-8.5.1.app/Contents/Resources/lib/liborc-0.4.0.dylib
       0x108164000 -        0x1081b1fff +liblcms2.2.dylib (3.8) <0FA59BC0-7CC3-3671-8A2F-E8E1291D0D6E> /Applications/nip2-8.5.1.app/Contents/Resources/lib/liblcms2.2.dylib
       0x1081c8000 -        0x1082b5fff +libIlmImf-Imf_2_1.21.dylib (22) <F3F1D3A7-64CA-3F2D-8224-4B39B8796CD2> /Applications/nip2-8.5.1.app/Contents/Resources/lib/libIlmImf-Imf_2_1.21.dylib
       0x108300000 -        0x10830dff7 +libImath-2_1.11.dylib (12) <B567D4B6-13AE-3321-BCF7-90B58BFB7776> /Applications/nip2-8.5.1.app/Contents/Resources/lib/libImath-2_1.11.dylib
       0x108318000 -        0x108359ff7 +libHalf.11.dylib (12) <6C1AABB2-AF39-33AB-9E49-503B950E75CD> /Applications/nip2-8.5.1.app/Contents/Resources/lib/libHalf.11.dylib
       0x10835c000 -        0x108363fff +libIex-2_1.11.dylib (12) <4B5E8AC6-17BC-312F-AD96-708BDE123D4E> /Applications/nip2-8.5.1.app/Contents/Resources/lib/libIex-2_1.11.dylib
       0x108371000 -        0x108373ff7 +libIexMath-2_1.11.dylib (12) <393A2520-B363-3AAE-9710-073C60B195A7> /Applications/nip2-8.5.1.app/Contents/Resources/lib/libIexMath-2_1.11.dylib
       0x10837d000 -        0x108381fff +libIlmThread-2_1.11.dylib (12) <6F7CBCED-68E4-3282-B566-1AD50824B8AE> /Applications/nip2-8.5.1.app/Contents/Resources/lib/libIlmThread-2_1.11.dylib
       0x108387000 -        0x1083b1fff +libopenslide.0.dylib (5.1) <5F9D0F3B-01A1-3BDC-9803-CB17939F6796> /Applications/nip2-8.5.1.app/Contents/Resources/lib/libopenslide.0.dylib
       0x1083bf000 -        0x1083f0fff +libmatio.4.dylib (5.2) <5A4F79F1-548E-3C4A-95D4-C18725B4A1BE> /Applications/nip2-8.5.1.app/Contents/Resources/lib/libmatio.4.dylib
       0x1083f6000 -        0x108417fff +libexif.12.dylib (16.3) <DA275D0E-F47F-3F69-A6C5-65D0AB0F9025> /Applications/nip2-8.5.1.app/Contents/Resources/lib/libexif.12.dylib
       0x108435000 -        0x10846cfff +libopenjp2.7.dylib (2.1.1) <6383AF83-4F6B-3A92-BE86-EF94499D36FF> /Applications/nip2-8.5.1.app/Contents/Resources/lib/libopenjp2.7.dylib
       0x108474000 -        0x1084e1ff7 +libharfbuzz.0.dylib (941) <072B8083-485B-3F72-A068-049A1FD27229> /Applications/nip2-8.5.1.app/Contents/Resources/lib/libharfbuzz.0.dylib
       0x1084f6000 -        0x1085f5ff7 +libsqlite3.0.dylib (9.6) <E2B69AC1-8188-36DE-B7C1-5539858CAD0C> /Applications/nip2-8.5.1.app/Contents/Resources/lib/libsqlite3.0.dylib
       0x115b64000 -        0x115bae98f  dyld (519.2.1) <CD85EFBA-B9D6-3FD5-B777-A23B2DDEF192> /usr/lib/dyld
    0x7fff4cee5000 -     0x7fff4cee5fff  com.apple.Accelerate (1.11 - Accelerate 1.11) <5AA750F5-D633-32BA-B7F3-4F651FB1761E> /System/Library/Frameworks/Accelerate.framework/Versions/A/Accelerate
    0x7fff4cefd000 -     0x7fff4d3fbfc3  com.apple.vImage (8.1 - ???) <310976EE-E12D-39D7-8F58-6EE924E08576> /System/Library/Frameworks/Accelerate.framework/Versions/A/Frameworks/vImage.framework/Versions/A/vImage
    0x7fff4d3fc000 -     0x7fff4d556fcb  libBLAS.dylib (1211.20.1) <B70FC2EE-0859-39DB-927E-0020AE96907F> /System/Library/Frameworks/Accelerate.framework/Versions/A/Frameworks/vecLib.framework/Versions/A/libBLAS.dylib
    0x7fff4d557000 -     0x7fff4d584fef  libBNNS.dylib (32) <9CA15DC6-004A-32FD-BFCA-F5D488012C43> /System/Library/Frameworks/Accelerate.framework/Versions/A/Frameworks/vecLib.framework/Versions/A/libBNNS.dylib
    0x7fff4d585000 -     0x7fff4d945ff7  libLAPACK.dylib (1211.20.1) <04B937A4-D0E7-33C8-A1C3-2724AD4FAB2F> /System/Library/Frameworks/Accelerate.framework/Versions/A/Frameworks/vecLib.framework/Versions/A/libLAPACK.dylib
    0x7fff4d946000 -     0x7fff4d95bff7  libLinearAlgebra.dylib (1211.20.1) <355307DE-82A5-32A3-8AC6-603D90E99601> /System/Library/Frameworks/Accelerate.framework/Versions/A/Frameworks/vecLib.framework/Versions/A/libLinearAlgebra.dylib
    0x7fff4d95c000 -     0x7fff4d961ff3  libQuadrature.dylib (3) <3D6BF66A-55B2-3692-BAC7-DEB0C676ED29> /System/Library/Frameworks/Accelerate.framework/Versions/A/Frameworks/vecLib.framework/Versions/A/libQuadrature.dylib
    0x7fff4d962000 -     0x7fff4d9c0fff  libSparse.dylib (79.1.1) <7AD0F8A8-FD36-36FE-B83D-58648EBD0027> /System/Library/Frameworks/Accelerate.framework/Versions/A/Frameworks/vecLib.framework/Versions/A/libSparse.dylib
    0x7fff4d9c1000 -     0x7fff4d9d4fff  libSparseBLAS.dylib (1211.20.1) <9C7AB67B-5BFD-3571-8D90-312D1DB10098> /System/Library/Frameworks/Accelerate.framework/Versions/A/Frameworks/vecLib.framework/Versions/A/libSparseBLAS.dylib
    0x7fff4d9d5000 -     0x7fff4db81fc3  libvDSP.dylib (622.20.8) <6FFCA52B-7D60-326A-ADF2-601F39A8685A> /System/Library/Frameworks/Accelerate.framework/Versions/A/Frameworks/vecLib.framework/Versions/A/libvDSP.dylib
    0x7fff4db82000 -     0x7fff4dc32fef  libvMisc.dylib (622.20.8) <54F90047-879F-3260-8604-6E453149B49E> /System/Library/Frameworks/Accelerate.framework/Versions/A/Frameworks/vecLib.framework/Versions/A/libvMisc.dylib
    0x7fff4dc33000 -     0x7fff4dc33fff  com.apple.Accelerate.vecLib (3.11 - vecLib 3.11) <8A96A8ED-7B88-3D17-8D17-41D224E0EC90> /System/Library/Frameworks/Accelerate.framework/Versions/A/Frameworks/vecLib.framework/Versions/A/vecLib
    0x7fff4df1d000 -     0x7fff4ed78ff7  com.apple.AppKit (6.9 - 1561.10.101) <AC5C259A-615C-3929-8586-0BC920696AFA> /System/Library/Frameworks/AppKit.framework/Versions/C/AppKit
    0x7fff4edca000 -     0x7fff4edcafff  com.apple.ApplicationServices (48 - 50) <3EB38526-9975-36C9-BADC-F9019A608267> /System/Library/Frameworks/ApplicationServices.framework/Versions/A/ApplicationServices
    0x7fff4edcb000 -     0x7fff4ee31fff  com.apple.ApplicationServices.ATS (377 - 445) <2303339C-5E2A-37DB-B2B0-E4E5DA9121E5> /System/Library/Frameworks/ApplicationServices.framework/Versions/A/Frameworks/ATS.framework/Versions/A/ATS
    0x7fff4eeca000 -     0x7fff4efecff7  libFontParser.dylib (222.1.1) <56C57A24-6A6A-3F32-8E40-5BFA4DA4B04D> /System/Library/Frameworks/ApplicationServices.framework/Versions/A/Frameworks/ATS.framework/Versions/A/Resources/libFontParser.dylib
    0x7fff4efed000 -     0x7fff4f037ff7  libFontRegistry.dylib (221) <A22F82C0-B4FE-3DB5-B968-79B28257DF2F> /System/Library/Frameworks/ApplicationServices.framework/Versions/A/Frameworks/ATS.framework/Versions/A/Resources/libFontRegistry.dylib
    0x7fff4f179000 -     0x7fff4f17dff3  com.apple.ColorSyncLegacy (4.13.0 - 1) <7C8AD42D-5A89-3BA6-B55D-374D9267E939> /System/Library/Frameworks/ApplicationServices.framework/Versions/A/Frameworks/ColorSyncLegacy.framework/Versions/A/ColorSyncLegacy
    0x7fff4f21d000 -     0x7fff4f26fff7  com.apple.HIServices (1.22 - 622) <2E83CD6F-ED98-3C29-BD0A-8525E38AB5DB> /System/Library/Frameworks/ApplicationServices.framework/Versions/A/Frameworks/HIServices.framework/Versions/A/HIServices
    0x7fff4f270000 -     0x7fff4f27efff  com.apple.LangAnalysis (1.7.0 - 1.7.0) <71A9C815-AC55-3E36-A618-F6778F5119AD> /System/Library/Frameworks/ApplicationServices.framework/Versions/A/Frameworks/LangAnalysis.framework/Versions/A/LangAnalysis
    0x7fff4f27f000 -     0x7fff4f2cbfff  com.apple.print.framework.PrintCore (13 - 503) <BC23C22A-7691-3BD4-8013-BAAE3A44763C> /System/Library/Frameworks/ApplicationServices.framework/Versions/A/Frameworks/PrintCore.framework/Versions/A/PrintCore
    0x7fff4f2cc000 -     0x7fff4f306fff  com.apple.QD (3.12 - 403) <38D8106A-4FFA-3FE9-9999-714CADD7EE9C> /System/Library/Frameworks/ApplicationServices.framework/Versions/A/Frameworks/QD.framework/Versions/A/QD
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    0x7fff4f314000 -     0x7fff4f59cff7  com.apple.audio.toolbox.AudioToolbox (1.14 - 1.14) <6894F95E-63B4-3484-A428-2963FB9BFEF9> /System/Library/Frameworks/AudioToolbox.framework/Versions/A/AudioToolbox
    0x7fff4f59e000 -     0x7fff4f59efff  com.apple.audio.units.AudioUnit (1.14 - 1.14) <FE0BC0EC-6353-34B5-8479-B33D6ED7EE5B> /System/Library/Frameworks/AudioUnit.framework/Versions/A/AudioUnit
    0x7fff4f8b4000 -     0x7fff4fc18fff  com.apple.CFNetwork (889.9 - 889.9) <AD7E1066-F856-314B-A0E0-3CDA012F4AFF> /System/Library/Frameworks/CFNetwork.framework/Versions/A/CFNetwork
    0x7fff4fc2d000 -     0x7fff4fc2dfff  com.apple.Carbon (158 - 158) <C34E5FF0-4FDA-35F1-85C2-FDAC4EDE8331> /System/Library/Frameworks/Carbon.framework/Versions/A/Carbon
    0x7fff4fc2e000 -     0x7fff4fc31ffb  com.apple.CommonPanels (1.2.6 - 98) <39C8EBA3-EEB2-335B-8A88-D6C64BAA112F> /System/Library/Frameworks/Carbon.framework/Versions/A/Frameworks/CommonPanels.framework/Versions/A/CommonPanels
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jcupitt commented Nov 26, 2017

Hello, I've not updated to 10.13 yet, I'm still on 10.12 where it seems to work fine. I'll update to 10.13 and try and fix it.

You shouldn't need to download any dependencies: just get the app and click on it.

In the meantime, it's on homebrew, so you can just

brew install nip2

And it should work, though the theme might be ugly.

@zoenglinghou
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zoenglinghou commented Nov 26, 2017 •
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@jcupitt brew/cask cannot find nip2 as a package, should I tap a brew source?

Yet I think the app issue needs to be addressed. I appreciate your effort and time!

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jcupitt commented Nov 26, 2017

Yes, it's part of homebrew-science. I've not tested it for ages, it might not work :(

I've updated my mac to High Sierra now, I'll try to test and maybe rebuild the app.

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jcupitt commented Dec 1, 2017

Hello again, I've built a test version of the new 8.6 release:

https://github.com/jcupitt/nip2/releases/tag/v8.6.0-beta2

It works on High Sierra for me. Any testing would be great!

@zoenglinghou
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@jcupitt It works for me so far!! Thank you!

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