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model.classes does not retrieve the full list of annotated classes in the redf file. #36

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corinabioinformatic opened this issue Nov 6, 2017 · 1 comment
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model.classes does not retrieve the full list of annotated classes in the redf file. #36

corinabioinformatic opened this issue Nov 6, 2017 · 1 comment
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@corinabioinformatic
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corinabioinformatic commented Nov 6, 2017 •
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Once I download the model in Ontospy:
url = "http://purl.obolibrary.org/obo/go.owl"
model = ontospy.Ontospy(url)
I extract only the GO_xxxxxxx anotated numbers from the classes, and write them down in a file. But it does not retrieve all the classes. I found this issue comparing the query with ontospy with another one using regular expressions.
I cannot figure out what's the problem.
Many thanks,

Corina
@lambdamusic
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What classes are missing?

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@lambdamusic @corinabioinformatic