soothsayer_utils

Utility functions for Soothsayer

Dependencies:

Compatible for Python 2 and 3.

# Required:
pandas
numpy
tqdm
tzlocal
requests # Python 2/3 compatibility
pathlib2 # Python 2/3 compatibility	
bz2file # Python 2/3 compatibility

# Optional:
biopython
mmh3
matplotlib

Install

# "Stable" release (still developmental)
pip install soothsayer-utils

# Current release
pip install git+https://github.com/jolespin/soothsayer_utils

# Conda: 
conda install -c jolespin soothsayer_utils

Note: conda installation may not be as up-to-date as PyPI or GitHub release