Skip to content

K-mer length enhancements
Compare
Choose a tag to compare
@johnlees johnlees released this 20 Apr 16:20
· 741 commits to master since this release
v1.3.0
1db204b

Adds the following features:

  • Extract Jaccard distances
  • Calculate and save genome length using minimum hash
  • Calculate and save base composition
  • Adjust comparisons for base composition, and expected random matches
  • Spaced seeds for short k-mer lengths

Bug fixes:

  • Error when calculating distances on a GPU (#18)
Assets 2
Loading