diff --git a/CHANGELOG.md b/CHANGELOG.md index e5752b6..afaed9a 100644 --- a/CHANGELOG.md +++ b/CHANGELOG.md @@ -1,5 +1,11 @@ # Changelog +## [0.1.4] 2023-11-15 + +### Added + +- more descriptive labels for inputs + ## [0.1.3] 2023-11-09 ### Automatic update - `toolshed.g2.bx.psu.edu/repos/iuc/genomescope/genomescope/2.0+galaxy1` was updated to `toolshed.g2.bx.psu.edu/repos/iuc/genomescope/genomescope/2.0+galaxy2` diff --git a/kmer-profiling-hifi-VGP1.ga b/kmer-profiling-hifi-VGP1.ga index e1585db..1fbeff5 100644 --- a/kmer-profiling-hifi-VGP1.ga +++ b/kmer-profiling-hifi-VGP1.ga @@ -14,18 +14,18 @@ ], "format-version": "0.1", "license": "CC-BY-4.0", - "release": "0.1.3", + "release":"0.1.4", "name": "kmer-profiling-hifi-VGP1", "steps": { "0": { - "annotation": "", + "annotation": "A simple list collection containing PacBio data in either fastq or fasta format", "content_id": null, "errors": null, "id": 0, "input_connections": {}, "inputs": [ { - "description": "", + "description": "A simple list collection containing PacBio data in either fastq or fasta format", "name": "Collection of Pacbio Data" } ], @@ -33,8 +33,8 @@ "name": "Input dataset collection", "outputs": [], "position": { - "left": 0, - "top": 15.427657616021285 + "left": 0.0, + "top": 86.5078125 }, "tool_id": null, "tool_state": "{\"optional\": false, \"tag\": \"\", \"collection_type\": \"list\"}", @@ -60,8 +60,8 @@ "name": "Input parameter", "outputs": [], "position": { - "left": 22.121832152706936, - "top": 151.04017592656817 + "left": 17.57421875, + "top": 226.734375 }, "tool_id": null, "tool_state": "{\"default\": 21, \"parameter_type\": \"integer\", \"optional\": true}", @@ -69,17 +69,23 @@ "type": "parameter_input", "uuid": "946bcadd-8ab0-4595-9985-abb574539844", "when": null, - "workflow_outputs": [] + "workflow_outputs": [ + { + "label": null, + "output_name": "output", + "uuid": "18b69ad3-4c09-46f5-9a4c-bf4097b37fef" + } + ] }, "2": { - "annotation": "", + "annotation": "Ploidy for the organism being assembled", "content_id": null, "errors": null, "id": 2, "input_connections": {}, "inputs": [ { - "description": "", + "description": "Ploidy for the organism being assembled", "name": "Ploidy" } ], @@ -87,8 +93,8 @@ "name": "Input parameter", "outputs": [], "position": { - "left": 65.68433215270693, - "top": 283.0276637195369 + "left": 50.12890625, + "top": 342.609375 }, "tool_id": null, "tool_state": "{\"default\": 2, \"parameter_type\": \"integer\", \"optional\": true}", @@ -96,7 +102,13 @@ "type": "parameter_input", "uuid": "e3848560-55a2-42a5-ac1a-487ccf084d92", "when": null, - "workflow_outputs": [] + "workflow_outputs": [ + { + "label": null, + "output_name": "output", + "uuid": "1fea95fa-67d6-408d-94b6-264107cc19a1" + } + ] }, "3": { "annotation": "", @@ -123,8 +135,8 @@ } ], "position": { - "left": 300.9374263897614, - "top": 16.412041203882488 + "left": 296.8668759977911, + "top": 27 }, "post_job_actions": { "HideDatasetActionread_db": { @@ -168,8 +180,8 @@ } ], "position": { - "left": 569.718710741206, - "top": 143.25579365755715 + "left": 576.8668759977911, + "top": 0 }, "post_job_actions": { "TagDatasetActionread_db": { @@ -221,8 +233,8 @@ } ], "position": { - "left": 859.375, - "top": 92.34016036987308 + "left": 856.8668759977911, + "top": 42 }, "post_job_actions": { "HideDatasetActionread_db_hist": { @@ -298,8 +310,8 @@ } ], "position": { - "left": 1198.9374694824219, - "top": 0.0 + "left": 1136.866875997791, + "top": 15 }, "post_job_actions": { "TagDatasetActionlinear_plot": { @@ -365,6 +377,11 @@ "uuid": "955de351-ef19-42dc-89d7-ca213994515a", "when": null, "workflow_outputs": [ + { + "label": "GenomeScope linear plot", + "output_name": "linear_plot", + "uuid": "57230be4-36d5-4307-b4b0-b8a73f6800ce" + }, { "label": "GenomeScope transformed linear plot", "output_name": "transformed_linear_plot", @@ -389,11 +406,6 @@ "label": "GenomeScope log plot", "output_name": "log_plot", "uuid": "988e2189-d5f2-4e9e-8fc2-4434e68e8501" - }, - { - "label": "GenomeScope linear plot", - "output_name": "linear_plot", - "uuid": "57230be4-36d5-4307-b4b0-b8a73f6800ce" } ] } @@ -402,6 +414,6 @@ "Reviewed", "VGP" ], - "uuid": "a3ef9c73-c661-46af-bfde-3daa97d8b473", - "version": 2 + "uuid": "7542ffba-d083-415e-b745-08d9503debc4", + "version": 4 } \ No newline at end of file diff --git a/ro-crate-metadata.json b/ro-crate-metadata.json index 71f4d18..5ba917f 100644 --- a/ro-crate-metadata.json +++ b/ro-crate-metadata.json @@ -4,7 +4,7 @@ { "@id": "./", "@type": "Dataset", - "datePublished": "2023-11-09T11:09:07.998474", + "datePublished": "2023-11-16T14:32:18.217599", "hasPart": [ { "@id": "kmer-profiling-hifi-VGP1.ga" @@ -42,7 +42,7 @@ "@id": "https://vertebrategenomeproject.org" }, { - "@id": "#72911fc7-3a6d-4e44-becb-7a5a864c18d8" + "@id": "#cbfa54c5-09f3-4dbe-b222-17ac12ff938a" } ], "name": "kmer-profiling-hifi-VGP1/main", @@ -50,7 +50,7 @@ "@id": "#galaxy" }, "url": "https://github.com/iwc-workflows/kmer-profiling-hifi-VGP1", - "version": "0.1.3" + "version": "0.1.4" }, { "@id": "#galaxy", @@ -70,7 +70,7 @@ "name": "VGP" }, { - "@id": "#72911fc7-3a6d-4e44-becb-7a5a864c18d8", + "@id": "#cbfa54c5-09f3-4dbe-b222-17ac12ff938a", "@type": "Organization", "name": "Galaxy" },