From a05c315f4120438ff9c3b5cd5203e4b3b91d560c Mon Sep 17 00:00:00 2001 From: Kevin Rue-Albrecht Date: Tue, 1 Oct 2024 13:40:34 +0100 Subject: [PATCH] update github action --- .github/workflows/check-bioc.yml | 8 ++++---- 1 file changed, 4 insertions(+), 4 deletions(-) diff --git a/.github/workflows/check-bioc.yml b/.github/workflows/check-bioc.yml index 8d26afb..f303027 100644 --- a/.github/workflows/check-bioc.yml +++ b/.github/workflows/check-bioc.yml @@ -52,9 +52,9 @@ jobs: fail-fast: false matrix: config: - - { os: ubuntu-latest, r: 'devel', bioc: '3.17', cont: "bioconductor/bioconductor_docker:devel", rspm: "https://packagemanager.rstudio.com/cran/__linux__/focal/latest" } - - { os: macOS-latest, r: 'devel', bioc: '3.17'} - - { os: windows-latest, r: 'devel', bioc: '3.17'} + - { os: ubuntu-latest, r: 'devel', bioc: '3.20', cont: "bioconductor/bioconductor_docker:devel", rspm: "https://packagemanager.rstudio.com/cran/__linux__/focal/latest" } + - { os: macOS-latest, r: 'devel', bioc: '3.20'} + - { os: windows-latest, r: 'devel', bioc: '3.20'} ## Check https://github.com/r-lib/actions/tree/master/examples ## for examples using the http-user-agent env: @@ -176,7 +176,7 @@ jobs: gha_repos <- if( .Platform$OS.type == "unix" && Sys.info()["sysname"] != "Darwin" ) c( - "AnVIL" = "https://bioconductordocker.blob.core.windows.net/packages/3.17/bioc", + "AnVIL" = "https://bioconductordocker.blob.core.windows.net/packages/3.20/bioc", BiocManager::repositories() ) else BiocManager::repositories()