environment.yml

name: degenotate
channels:
  - conda-forge
  - bioconda
  - defaults
dependencies:
  - _libgcc_mutex=0.1=conda_forge
  - _openmp_mutex=4.5=2_gnu
  - appdirs=1.4.4=pyh9f0ad1d_0
  - brotlipy=0.7.0=py310h5764c6d_1005
  - bzip2=1.0.8=h7f98852_4
  - c-ares=1.18.1=h7f98852_0
  - ca-certificates=2022.12.7=ha878542_0
  - certifi=2022.12.7=pyhd8ed1ab_0
  - cffi=1.15.1=py310h255011f_3
  - charset-normalizer=2.1.1=pyhd8ed1ab_0
  - cryptography=39.0.0=py310h65dfdc0_0
  - idna=3.4=pyhd8ed1ab_0
  - keyutils=1.6.1=h166bdaf_0
  - krb5=1.19.3=h3790be6_0
  - ld_impl_linux-64=2.36.1=hea4e1c9_2
  - libblas=3.9.0=16_linux64_openblas
  - libcblas=3.9.0=16_linux64_openblas
  - libcurl=7.85.0=h7bff187_0
  - libdeflate=1.13=h166bdaf_0
  - libedit=3.1.20191231=he28a2e2_2
  - libev=4.33=h516909a_1
  - libffi=3.4.2=h7f98852_5
  - libgcc-ng=12.1.0=h8d9b700_16
  - libgfortran-ng=12.2.0=h69a702a_19
  - libgfortran5=12.2.0=h337968e_19
  - libgomp=12.1.0=h8d9b700_16
  - liblapack=3.9.0=16_linux64_openblas
  - libnghttp2=1.47.0=hdcd2b5c_1
  - libnsl=2.0.0=h7f98852_0
  - libopenblas=0.3.21=pthreads_h78a6416_3
  - libsqlite=3.39.4=h753d276_0
  - libssh2=1.10.0=haa6b8db_3
  - libstdcxx-ng=12.1.0=ha89aaad_16
  - libuuid=2.32.1=h7f98852_1000
  - libzlib=1.2.12=h166bdaf_4
  - ncurses=6.3=h27087fc_1
  - networkx=2.8.7=pyhd8ed1ab_0
  - numpy=1.24.1=py310h8deb116_0
  - openssl=1.1.1s=h0b41bf4_1
  - packaging=23.0=pyhd8ed1ab_0
  - pip=22.2.2=pyhd8ed1ab_0
  - pooch=1.6.0=pyhd8ed1ab_0
  - pycparser=2.21=pyhd8ed1ab_0
  - pyopenssl=23.0.0=pyhd8ed1ab_0
  - pysam=0.19.1=py310hff46b53_1
  - pysocks=1.7.1=pyha2e5f31_6
  - python=3.10.6=h582c2e5_0_cpython
  - python_abi=3.10=2_cp310
  - readline=8.1.2=h0f457ee_0
  - requests=2.28.2=pyhd8ed1ab_0
  - scipy=1.10.0=py310h8deb116_0
  - setuptools=65.4.1=pyhd8ed1ab_0
  - tk=8.6.12=h27826a3_0
  - tzdata=2022d=h191b570_0
  - urllib3=1.26.14=pyhd8ed1ab_0
  - wheel=0.37.1=pyhd8ed1ab_0
  - xz=5.2.6=h166bdaf_0
  - zlib=1.2.12=h166bdaf_4