From a68c0b5448bd55735fd38485caa8673e8ba027b5 Mon Sep 17 00:00:00 2001 From: Greg Lin Date: Sun, 30 Apr 2023 22:51:39 -0500 Subject: [PATCH] Fix failed vignette build with R 4.3; convert CSV to UTF-8 --- vignettes/cran-packages/cran_pkgs.csv | 68 +++++++++++++-------------- 1 file changed, 34 insertions(+), 34 deletions(-) diff --git a/vignettes/cran-packages/cran_pkgs.csv b/vignettes/cran-packages/cran_pkgs.csv index d1df6a1a..18d842c1 100644 --- a/vignettes/cran-packages/cran_pkgs.csv +++ b/vignettes/cran-packages/cran_pkgs.csv @@ -17,16 +17,16 @@ Francois (2011, ), the book by Eddelbuettel (2013, ); see 'citation(""Rcpp"")' for details.","2019-03-17","GPL (>= 2)","http://www.rcpp.org, http://dirk.eddelbuettel.com/code/rcpp.html, https://github.com/RcppCore/Rcpp","yes",NA,6003023,"R (>= 3.0.0)","methods, utils",NA,"RUnit, inline, rbenchmark, knitr, rmarkdown, pinp, pkgKitten (>= 0.1.2)" "dplyr","A Grammar of Data Manipulation","0.8.3","Hadley Wickham [aut, cre] (), -Romain Fran�ois [aut] (), +Romain François [aut] (), Lionel Henry [aut], -Kirill M�ller [aut] (), +Kirill Müller [aut] (), RStudio [cph, fnd]","Hadley Wickham ","A fast, consistent tool for working with data frame like objects, both in memory and out of memory.","2019-07-04","MIT + file LICENSE","http://dplyr.tidyverse.org, https://github.com/tidyverse/dplyr","yes",NA,5497363,"R (>= 3.2.0)","assertthat (>= 0.2.0), glue (>= 1.3.0), magrittr (>= 1.5), methods, pkgconfig, R6, Rcpp (>= 1.0.1), rlang (>= 0.4.0), tibble (>= 2.0.0), tidyselect (>= 0.2.5), utils","BH, plogr (>= 0.2.0), Rcpp (>= 1.0.1)","bit64, callr, covr, crayon (>= 1.3.4), DBI, dbplyr, dtplyr, ggplot2, hms, knitr, Lahman, lubridate, MASS, mgcv, microbenchmark, nycflights13, rmarkdown, RMySQL, RPostgreSQL, RSQLite, testthat, withr, broom, purrr, readr" -"tibble","Simple Data Frames","2.1.3","Kirill M�ller [aut, cre], +"tibble","Simple Data Frames","2.1.3","Kirill Müller [aut, cre], Hadley Wickham [aut], Romain Francois [ctb], Jennifer Bryan [ctb], -RStudio [cph]","Kirill M�ller ","Provides a 'tbl_df' class (the 'tibble') that provides +RStudio [cph]","Kirill Müller ","Provides a 'tbl_df' class (the 'tibble') that provides stricter checking and better formatting than the traditional data frame.","2019-06-06","MIT + file LICENSE","http://tibble.tidyverse.org/, https://github.com/tidyverse/tibble","yes",NA,5233800,"R (>= 3.1.0)","cli, crayon (>= 1.3.4), fansi (>= 0.4.0), methods, pillar (>= 1.3.1), pkgconfig, rlang (>= 0.3.0), utils",NA,"bench, covr, dplyr, htmltools, import, knitr, mockr, nycflights13, rmarkdown, testthat, withr" "ggplot2","Create Elegant Data Visualisations Using the Grammar of Graphics","3.2.0","Hadley Wickham [aut, cre], Winston Chang [aut], @@ -44,9 +44,9 @@ and it takes care of the details.","2019-06-16","GPL-2 | file LICENSE","http://g Python's Literal String Interpolation and Docstrings and Julia's Triple-Quoted String Literals .","2019-03-12","MIT + file LICENSE","https://github.com/tidyverse/glue","yes",NA,4487818,"R (>= 3.1)","methods",NA,"testthat, covr, magrittr, crayon, knitr, rmarkdown, DBI, RSQLite, R.utils, forcats, microbenchmark, rprintf, stringr, ggplot2, dplyr, withr" -"pillar","Coloured Formatting for Columns","1.4.2","Kirill M�ller [aut, cre], +"pillar","Coloured Formatting for Columns","1.4.2","Kirill Müller [aut, cre], Hadley Wickham [aut], -RStudio [cph]","Kirill M�ller ","Provides 'pillar' and 'colonnade' generics designed for formatting columns +RStudio [cph]","Kirill Müller ","Provides 'pillar' and 'colonnade' generics designed for formatting columns of data using the full range of colours provided by modern terminals.","2019-06-29","GPL-3","https://github.com/r-lib/pillar","no",NA,4481377,NA,"cli, crayon (>= 1.3.4), fansi, rlang (>= 0.3.0), utf8 (>= 1.1.0), vctrs",NA,"knitr, lubridate, testthat, withr" "data.table","Extension of `data.frame`","1.12.2","Matt Dowle [aut, cre], Arun Srinivasan [aut], @@ -91,9 +91,9 @@ and lighter-weight, and they are not built on S4 classes so they do not require the methods package. These classes allow public and private members, and they support inheritance, even when the classes are defined in different packages.","2019-02-14","MIT + file LICENSE","https://r6.r-lib.org, https://github.com/r-lib/R6/","no",NA,4116156,"R (>= 3.0)",NA,NA,"knitr, microbenchmark, pryr, testthat, ggplot2, scales" -"cli","Helpers for Developing Command Line Interfaces","1.1.0","G�bor Cs�rdi [aut, cre], +"cli","Helpers for Developing Command Line Interfaces","1.1.0","Gábor Csárdi [aut, cre], Hadley Wickham [ctb], -Kirill M�ller [ctb]","G�bor Cs�rdi ","A suite of tools designed to build attractive command line +Kirill Müller [ctb]","Gábor Csárdi ","A suite of tools designed to build attractive command line interfaces ('CLIs'). Includes tools for drawing rules, boxes, trees, and 'Unicode' symbols with 'ASCII' alternatives.","2019-03-19","MIT + file LICENSE","https://github.com/r-lib/cli#readme","no",NA,4050925,"R (>= 2.10)","assertthat, crayon (>= 1.3.4), methods, utils",NA,"covr, fansi, mockery, testthat, webshot, withr" "stringr","Simple, Consistent Wrappers for Common String Operations","1.4.0","Hadley Wickham [aut, cre, cph], @@ -150,7 +150,7 @@ Steven Akins [ctb], Bao Nguyen [ctb], Thierry Onkelinx [ctb]","Thomas J. Leeper ","A simple client package for the Amazon Web Services ('AWS') Simple Storage Service ('S3') 'REST' 'API' .","2018-05-25","GPL (>= 2)","https://github.com/cloudyr/aws.s3","no",NA,3640248,NA,"utils, tools, httr, xml2 (> 1.0.0), base64enc, digest, aws.signature (>= 0.3.7)",NA,"testthat, datasets" -"pkgconfig","Private Configuration for 'R' Packages","2.0.2","G�bor Cs�rdi","G�bor Cs�rdi ","Set configuration options on a per-package basis. +"pkgconfig","Private Configuration for 'R' Packages","2.0.2","Gábor Csárdi","Gábor Csárdi ","Set configuration options on a per-package basis. Options set by a given package only apply to that package, other packages are unaffected.","2018-08-16","MIT + file LICENSE","https://github.com/r-lib/pkgconfig#readme","no",NA,3634207,NA,"utils",NA,"covr, testthat, disposables (>= 1.0.3)" "curl","A Modern and Flexible Web Client for R","4.0","Jeroen Ooms [aut, cre] (), @@ -182,8 +182,8 @@ included: 'algorithm' 'align' 'any' 'atomic' 'bimap' 'bind' 'multiprcecision' 'numeric' 'pending' 'phoenix' 'preprocessor' 'propery_tree' 'random' 'range' 'scope_exit' 'smart_ptr' 'sort' 'spirit' 'tuple' 'type_traits' 'typeof' 'unordered' 'utility' 'uuid'.","2019-01-07","BSL-1.0",NA,"no",NA,3568714,NA,NA,NA,NA -"crayon","Colored Terminal Output","1.3.4","G�bor Cs�rdi [aut, cre], -Brodie Gaslam [ctb]","G�bor Cs�rdi ","Colored terminal output on terminals that support 'ANSI' +"crayon","Colored Terminal Output","1.3.4","Gábor Csárdi [aut, cre], +Brodie Gaslam [ctb]","Gábor Csárdi ","Colored terminal output on terminals that support 'ANSI' color and highlight codes. It also works in 'Emacs' 'ESS'. 'ANSI' color support is automatically detected. Colors and highlighting can be combined and nested. New styles can also be created easily. @@ -255,7 +255,7 @@ Kohske Takahashi [ctb], Lorenz Walthert [ctb], Lucas Gallindo [ctb], Marius Hofert [ctb], -Martin Modr�k [ctb], +Martin Modrák [ctb], Michael Chirico [ctb], Michael Friendly [ctb], Michal Bojanowski [ctb], @@ -416,7 +416,7 @@ It makes it easy to implement select-like functions in your own packages in a way that is consistent with other 'tidyverse' interfaces for selection.","2018-10-11","GPL-3",NA,"yes",NA,2918933,"R (>= 3.1)","glue (>= 1.3.0), purrr, rlang (>= 0.2.2), Rcpp (>= 0.12.0)","Rcpp (>= 0.12.0),","covr, dplyr, testthat" "withr","Run Code 'With' Temporarily Modified Global State","2.1.2","Jim Hester [aut, cre], -Kirill M�ller [aut], +Kirill Müller [aut], Kevin Ushey [aut], Hadley Wickham [aut], Winston Chang [aut], @@ -521,8 +521,8 @@ Jim Hester [aut, cre], Romain Francois [aut], R Core Team [ctb] (Date time code adapted from R), RStudio [cph, fnd], -Jukka Jyl�nki [ctb, cph] (grisu3 implementation), -Mikkel J�rgensen [ctb, cph] (grisu3 implementation)","Jim Hester ","The goal of 'readr' is to provide a fast and friendly way to read +Jukka Jylänki [ctb, cph] (grisu3 implementation), +Mikkel Jørgensen [ctb, cph] (grisu3 implementation)","Jim Hester ","The goal of 'readr' is to provide a fast and friendly way to read rectangular data (like 'csv', 'tsv', and 'fwf'). It is designed to flexibly parse many types of data found in the wild, while still cleanly failing when data unexpectedly changes.","2018-12-21","GPL (>= 2) | file LICENSE","http://readr.tidyverse.org, https://github.com/tidyverse/readr","yes","GNU make",2637284,"R (>= 3.1)","Rcpp (>= 0.12.0.5), tibble, hms (>= 0.4.1), R6, clipr, crayon, methods","Rcpp, BH","curl, testthat, knitr, rmarkdown, stringi, covr, spelling" @@ -553,11 +553,11 @@ contains helper functions to compile 'LaTeX' documents, and install missing Noam Ross [ctb, cph], Bob Rudis [ctb, cph], Marco Sciaini [ctb, cph], -C�dric Scherer [ctb, cph]","Simon Garnier ","Implementation of the 'viridis' - the default -, 'magma', 'plasma', +Cédric Scherer [ctb, cph]","Simon Garnier ","Implementation of the 'viridis' - the default -, 'magma', 'plasma', 'inferno', and 'cividis' color maps for 'R'. 'viridis', 'magma', 'plasma', and 'inferno' are ported from 'matplotlib' , a popular plotting library for 'python'. 'cividis', was developed by Jamie R. -Nu�ez and Sean M. Colby. These color maps are designed in such a way that +Nuñez and Sean M. Colby. These color maps are designed in such a way that they will analytically be perfectly perceptually-uniform, both in regular form and also when converted to black-and-white. They are also designed to be perceived by readers with the most common form of color blindness (all @@ -568,9 +568,9 @@ be found at .","2018-02-01","MIT + f Time intervals: 1337000 -> 15d 11h 23m 20s. Vague time intervals: 2674000 -> about a month ago. Bytes: 1337 -> 1.34 kB.","2015-07-13","MIT + file LICENSE","https://github.com/gaborcsardi/prettyunits","no",NA,2566273,NA,"magrittr, assertthat, methods",NA,"testthat" -"hms","Pretty Time of Day","0.5.0","Kirill M�ller [aut, cre], +"hms","Pretty Time of Day","0.5.0","Kirill Müller [aut, cre], The R Consortium [fnd], -RStudio [fnd]","Kirill M�ller ","Implements an S3 class for storing and formatting time-of-day +RStudio [fnd]","Kirill Müller ","Implements an S3 class for storing and formatting time-of-day values, based on the 'difftime' class.","2019-07-09","GPL-3","https://github.com/tidyverse/hms","no",NA,2499887,NA,"methods, pkgconfig, rlang, vctrs (>= 0.2.0)",NA,"crayon, lubridate, pillar (>= 1.1.0), testthat" "xml2","Parse XML","1.2.0","Hadley Wickham [aut], James Hester [aut, cre], @@ -627,14 +627,14 @@ Kenton Russell [aut, cph], RStudio [cph]","Joe Cheng ","A framework for creating HTML widgets that render in various contexts including the R console, 'R Markdown' documents, and 'Shiny' web applications.","2018-09-30","MIT + file LICENSE","https://github.com/ramnathv/htmlwidgets","no",NA,2475617,NA,"grDevices, htmltools (>= 0.3), jsonlite (>= 0.9.16), yaml",NA,"knitr (>= 1.8)" -"plogr","The 'plog' C++ Logging Library","0.2.0","Kirill M�ller [aut, cre], -Sergey Podobry [cph] (Author of the bundled plog library)","Kirill M�ller "," +"plogr","The 'plog' C++ Logging Library","0.2.0","Kirill Müller [aut, cre], +Sergey Podobry [cph] (Author of the bundled plog library)","Kirill Müller "," A simple header-only logging library for C++. Add 'LinkingTo: plogr' to 'DESCRIPTION', and '#include ' in your C++ modules to use it.","2018-03-25","MIT + file LICENSE","https://github.com/krlmlr/plogr#readme","no",NA,2449010,NA,NA,NA,"Rcpp" -"processx","Execute and Control System Processes","3.4.1","G�bor Cs�rdi [aut, cre, cph] (), +"processx","Execute and Control System Processes","3.4.1","Gábor Csárdi [aut, cre, cph] (), Winston Chang [aut], RStudio [cph, fnd], -Mango Solutions [cph, fnd]","G�bor Cs�rdi ","Tools to run system processes in the background. +Mango Solutions [cph, fnd]","Gábor Csárdi ","Tools to run system processes in the background. It can check if a background process is running; wait on a background process to finish; get the exit status of finished processes; kill background processes. It can read the standard output and error of @@ -643,16 +643,16 @@ a process for standard output or error, with a timeout. It can also poll several processes at once.","2019-07-18","MIT + file LICENSE","https://processx.r-lib.org, https://github.com/r-lib/processx#readme","yes",NA,2445900,NA,"ps (>= 1.2.0), R6, utils",NA,"callr (>= 3.2.0), codetools, covr, crayon, curl, debugme, parallel, testthat, withr" "sys","Powerful and Reliable Tools for Running System Commands in R","3.2","Jeroen Ooms [aut, cre] (), -G�bor Cs�rdi [ctb]","Jeroen Ooms ","Drop-in replacements for the base system2() function with fine control +Gábor Csárdi [ctb]","Jeroen Ooms ","Drop-in replacements for the base system2() function with fine control and consistent behavior across platforms. Supports clean interruption, timeout, background tasks, and streaming STDIN / STDOUT / STDERR over binary or text connections. Arguments on Windows automatically get encoded and quoted to work on different locales.","2019-04-23","MIT + file LICENSE","https://github.com/jeroen/sys#readme","yes",NA,2429136,NA,NA,NA,"unix (>= 1.4), spelling, testthat" "labeling","Axis Labeling","0.3","Justin Talbot","Justin Talbot ","Provides a range of axis labeling algorithms","2014-08-23","MIT + file LICENSE | Unlimited",NA,"no",NA,2425915,NA,NA,NA,NA -"callr","Call R from R","3.3.1","G�bor Cs�rdi [aut, cre, cph] (), +"callr","Call R from R","3.3.1","Gábor Csárdi [aut, cre, cph] (), Winston Chang [aut], RStudio [cph, fnd], -Mango Solutions [cph, fnd]","G�bor Cs�rdi ","It is sometimes useful to perform a computation in a +Mango Solutions [cph, fnd]","Gábor Csárdi ","It is sometimes useful to perform a computation in a separate R process, without affecting the current R process at all. This packages does exactly that.","2019-07-18","MIT + file LICENSE","https://github.com/r-lib/callr#readme","no",NA,2380631,NA,"processx (>= 3.4.0), R6, utils",NA,"cliapp, covr, crayon, knitr, pingr, ps, rmarkdown, rprojroot, spelling, testthat, tibble, withr" "rstudioapi","Safely Access the RStudio API","0.10","Kevin Ushey [aut, cre], @@ -669,7 +669,7 @@ https://tinycthread.github.io/), Evan Nemerson [ctb, cph] (TinyCThread library, https://tinycthread.github.io/)","Joe Cheng ","Executes arbitrary R or C functions some time after the current time, after the R execution stack has emptied.","2019-02-11","GPL (>= 2)","https://github.com/r-lib/later","yes",NA,2314492,NA,"Rcpp (>= 0.12.9), rlang","Rcpp, BH","knitr, rmarkdown, testthat" -"progress","Terminal Progress Bars","1.2.2","G�bor Cs�rdi [aut, cre], Rich FitzJohn [aut]","G�bor Cs�rdi ","Configurable Progress bars, they may include percentage, +"progress","Terminal Progress Bars","1.2.2","Gábor Csárdi [aut, cre], Rich FitzJohn [aut]","Gábor Csárdi ","Configurable Progress bars, they may include percentage, elapsed time, and/or the estimated completion time. They work in terminals, in 'Emacs' 'ESS', 'RStudio', 'Windows' 'Rgui' and the 'macOS' 'R.app'. The package also provides a 'C++' 'API', that works @@ -748,8 +748,8 @@ and alert the user.","2019-07-02","GPL-3","https://github.com/r-lib/ellipsis","y "ps","List, Query, Manipulate System Processes","1.3.0","Jay Loden [aut], Dave Daeschler [aut], Giampaolo Rodola' [aut], -G�bor Cs�rdi [aut, cre], -RStudio [cph]","G�bor Cs�rdi ","List, query and manipulate all system processes, on 'Windows', +Gábor Csárdi [aut, cre], +RStudio [cph]","Gábor Csárdi ","List, query and manipulate all system processes, on 'Windows', 'Linux' and 'macOS'.","2018-12-21","BSD_3_clause + file LICENSE","https://github.com/r-lib/ps#readme","yes",NA,2078196,"R (>= 3.1)","utils",NA,"callr, covr, curl, pingr, processx (>= 3.1.0), R6, rlang, testthat, tibble" "fs","Cross-Platform File System Operations Based on 'libuv'","1.3.1","Jim Hester [aut, cre], Hadley Wickham [aut], @@ -759,8 +759,8 @@ RStudio [cph, fnd]","Jim Hester ","A cross-platform in top of the 'libuv' C library.","2019-05-06","GPL-3","http://fs.r-lib.org, https://github.com/r-lib/fs","yes","GNU make",2036878,"R (>= 3.1)","methods, Rcpp","Rcpp","testthat, covr, pillar (>= 1.0.0), crayon, rmarkdown, knitr, withr, spelling" "DBI","R Database Interface","1.0.0","R Special Interest Group on Databases (R-SIG-DB) [aut], Hadley Wickham [aut], -Kirill M�ller [aut, cre] (), -R Consortium [fnd]","Kirill M�ller ","A database interface definition for communication +Kirill Müller [aut, cre] (), +R Consortium [fnd]","Kirill Müller ","A database interface definition for communication between R and relational database management systems. All classes in this package are virtual and need to be extended by the various R/DBMS implementations.","2018-05-02","LGPL (>= 2)","http://r-dbi.github.io/DBI","no",NA,2027103,"R (>= 3.0.0), methods",NA,NA,"blob, covr, hms, knitr, magrittr, rprojroot, rmarkdown, RSQLite (>= 1.1-2), testthat, xml2" @@ -826,7 +826,7 @@ https://github.com/WizardMac/ReadStat","yes","GNU make",1978498,"R (>= 3.2)","fo Anton Antonov [ctb]","Baptiste Auguie ","Provides a number of user-level functions to work with ""grid"" graphics, notably to arrange multiple grid-based plots on a page, and draw tables.","2017-09-09","GPL (>= 2)",NA,"no",NA,1861299,NA,"gtable, grid, grDevices, graphics, utils",NA,"ggplot2, egg, lattice, knitr, testthat" -"igraph","Network Analysis and Visualization","1.2.4.1","See AUTHORS file.","G�bor Cs�rdi ","Routines for simple graphs and network analysis. It can +"igraph","Network Analysis and Visualization","1.2.4.1","See AUTHORS file.","Gábor Csárdi ","Routines for simple graphs and network analysis. It can handle large graphs very well and provides functions for generating random and regular graphs, graph visualization, centrality methods and much more.","2019-04-22","GPL (>= 2)","http://igraph.org","yes","gmp (optional), libxml2 (optional), glpk (optional)",1830935,"methods","graphics, grDevices, magrittr, Matrix, pkgconfig (>= 2.0.0), stats, utils",NA,"ape, digest, graph, igraphdata, rgl, scales, stats4, tcltk, testthat" "generics","Common S3 Generics not Provided by Base R Methods Related to @@ -856,7 +856,7 @@ RStudio [cph]","Hadley Wickham ","Wrappers around the 'xml2' make it easy to download, then manipulate, HTML and XML.","2019-05-15","GPL-3","http://rvest.tidyverse.org/, https://github.com/tidyverse/rvest","no",NA,1749438,"R (>= 3.2), xml2","httr (>= 0.5), magrittr, selectr",NA,"covr, knitr, png, rmarkdown, spelling, stringi (>= 0.3.1), testthat" "remotes","R Package Installation from Remote Repositories, Including 'GitHub'","2.1.0","Jim Hester [aut, cre], -G�bor Cs�rdi [aut], +Gábor Csárdi [aut], Hadley Wickham [aut], Winston Chang [aut], RStudio [cph], @@ -873,7 +873,7 @@ RStudio [cph]","Hadley Wickham ","Defines new notions of pro used to provide tools for consistent and well-founded type-coercion and size-recycling, and are in turn connected to ideas of type- and size-stability useful for analyzing function interfaces.","2019-07-05","GPL-3","https://github.com/r-lib/vctrs","yes",NA,1592780,"R (>= 3.2)","backports, ellipsis (>= 0.2.0), digest, glue, rlang (>= 0.4.0), zeallot",NA,"bit64, covr, crayon, generics, knitr, pillar (>= 1.4.1), pkgdown, rmarkdown, testthat, tibble" -"rprojroot","Finding Files in Project Subdirectories","1.3-2","Kirill M�ller [aut, cre]","Kirill M�ller ","Robust, reliable and flexible paths to files below a +"rprojroot","Finding Files in Project Subdirectories","1.3-2","Kirill Müller [aut, cre]","Kirill Müller ","Robust, reliable and flexible paths to files below a project root. The 'root' of a project is defined as a directory that matches a certain criterion, e.g., it contains a certain regular file.","2018-01-03","GPL-3","https://github.com/krlmlr/rprojroot,