Program received signal SIGSEGV: Segmentation fault - invalid memory reference

[dyblove]

Your name

Yibo Dou

Your affiliation

PKU

What happened? What did you expect to happen?

Dear experts @yantosca, @ltmurray, I am about to conduct a half-year spin-up for the formal simulation. I have fixed the meteorological data to the values of 2015 and downloaded all the requisite data. Nevertheless, when I input the command ./gcclassic > GC.log 2>&1 to commence the operation, I came across an error message in GC.log, which is presented as follows:

My program was terminated, I was very frustrated, I wanted to know what went wrong, I attached the run log and configuration file below, hoping it would be fixed. Your detailed reply will be very important to me. Thank you very much！
Best wishes！

What are the steps to reproduce the bug?

I am about to conduct a half-year spin-up for the formal simulation. I have fixed the meteorological data to the values of 2015 and downloaded all the requisite data. Nevertheless, when I input the command ./gcclassic > GC.log 2>&1 to commence the operation, I came across an error message and my program was terminated.

Please attach any relevant configuration and log files.

GC.log.txt
HEMCO_Config.rc.txt
geoschem_config.yml.txt
HEMCO_Config.rc.gmao_metfields.txt
HEMCO_Diagn.rc.txt
HISTORY.rc.txt

What GEOS-Chem version were you using?

14.4.3

What environment were you running GEOS-Chem on?

Other (please explain below)

What compiler and version were you using?

GCC 9.4.0

Will you be addressing this bug yourself?

Yes

In what configuration were you running GEOS-Chem?

GCClassic

What simulation were you running?

Full chemistry

As what resolution were you running GEOS-Chem?

2×2.5

What meterology fields did you use?

MERRA-2

Additional information

No response

[yantosca]

Thanks for writing @dyblove. It looks like your system (or queue) does not have sufficient memory to run your job.

Please see the following documentation for some debugging tips:

• Understand what error messages mean
• Debug GEOS-Chem and HEMCO errors