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Can't open olson_2001_Drydep_input.nc #2628

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Leonardchenll opened this issue Dec 11, 2024 · 3 comments
Open

Can't open olson_2001_Drydep_input.nc #2628

Leonardchenll opened this issue Dec 11, 2024 · 3 comments
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category: Bug Something isn't working topic: User Environment Relating to libraries, containers, AMIs, etc.

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@Leonardchenll
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Your name

Liliang Chen

Your affiliation

Chinese research academy of Environmental Science

What happened? What did you expect to happen?

6d9691f064a4df280cb7131a5c75fdc Last time Mr.[yantosca](https://github.com/yantosca) told me It could be that the file is incomplete or corrupted.However I download this .nc from [geoschemdata.wustl.edu](http://geoschemdata.wustl.edu/) over and over again,It still didn't work.

But this time I got a clue that I could read the first variable but couldn't read other variables

What are the steps to reproduce the bug?

And I also want to post that I could open and read other ,nc
微信图片编辑_20241211092435
So could it be the reason of my netcdf version? And what's the real reason,How can I solve it.Thanks.

Please attach any relevant configuration and log files.

No response

What GEOS-Chem version were you using?

13.4.0

What environment were you running GEOS-Chem on?

Local cluster, Personal computer

What compiler and version were you using?

gcc 11.2.0,netcdf-c.4.8.0 netcdf-f 4.5.3

Will you be addressing this bug yourself?

Yes

In what configuration were you running GEOS-Chem?

GCClassic

What simulation were you running?

Full chemistry

As what resolution were you running GEOS-Chem?

4x5

What meterology fields did you use?

MERRA-2

Additional information

No response

@Leonardchenll Leonardchenll added the category: Bug Something isn't working label Dec 11, 2024
@Leonardchenll Leonardchenll changed the title Can'te open olson_2001_Drydep_input.nc Can't open olson_2001_Drydep_input.nc Dec 11, 2024
@yantosca
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Thanks for writing @Leonardchenll. I have not seen this error before. It seems like it might be a problem on your system. It could be an issue with your netCDF installation.

Make sure you are compiling GEOS-Chem with the same compiler that the netCDF libraries were built with. Other than that I don't have a lot of other suggestions as this error is new to us.

@yantosca yantosca added the topic: User Environment Relating to libraries, containers, AMIs, etc. label Dec 11, 2024
@Leonardchenll
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@yantosca Thank you very much for your reply.In fact,I do compile GEOS-Chem with the same compiler that the netCDF libraries were built with. I am so upset because I have been stuck for a long time. So could you come up with other possible reasons? You are such a nice guy that I am so grateful.

@yantosca
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Thanks for writing @Leonardchenll. I am not sure what the problem is. It may be something specific to your system which I wouldn't be able to assist with. I would recommend trying to rebuild the netCDF libraries in case the original library installation was corrupted or incorrectly installed. You (or your sysadmin) can do that with Spack as described on ReadTheDocs:

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Labels
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