DESCRIPTION

Package: cellula
Type: Package
Title: Simple scRNAseq pipeline
Version: 1.0.000
Author: Giuseppe D'Agostino
Maintainer: Giuseppe D'Agostino <g.a.dagostino@gmail.com>
Description: Wrapper around a simple integration pipeline for scRNAseq with some
    choices for integration method, clustering and annotation.
License: MIT + file LICENSE
Encoding: UTF-8
LazyData: true
RoxygenNote: 7.3.2
Imports: 
    SingleCellExperiment,
    SummarizedExperiment,
    BiocNeighbors,
    ggplot2,
    grDevices,
    graphics,
    stats,
    utils,
    methods,
    scran,
    scater,
    scuttle,
    bluster,
    batchelor,
    uwot,
    BiocParallel,
    ggbeeswarm,
    igraph,
    gridExtra,
    S4Vectors,
    rlang,
    Matrix,
    matrixStats,
    ggrepel,
    reshape2,
    patchwork
Suggests: 
    AUCell,
    destiny,
    DropletUtils,
    harmony,
    rliger,
    RcppPlanc,
    GSVA,
    monocle3,
    scDblFinder,
    scMerge,
    SeuratObject,
    Seurat,
    slingshot,
    STACAS,
    tricycle,
    TSCAN,
    UCell