Releases: gamcil/cblaster
Releases · gamcil/cblaster
cblaster v1.3.10
- Change default value for
--percent
argument to 0 from 50 to prevent confusion when no results - Fix parsed GFF records not being correctly converted to SQL insertion tuples, should address #63
cblaster v1.3.9
- Adds the ability to load local profile HMM files instead of just Pfam domains
- Can now look up Pfams by family name, e.g. --query_profiles AMP-binding
- Add local profile HMM support to GUI
- Add example search output and small README on how to generate it
- Change default font family of generated plot
cblaster v1.3.8
- Fix bug in preventing use of config module
cblaster v1.3.7
- Fix manually translated sequences not being cast to str, causing crash when inserting into database
- Check feature is pseudogene before translation
cblaster v1.3.6
- Fix bug when retrieving protein translations from genomes for makedb
cblaster v1.3.5
- Fix sequences not being saved when searching with query IDs
cblaster v1.3.4
- Update extract module help
- Use trusted cutoffs for local HMM searches
cblaster v1.3.3
- Fix bug when creating local databases from bad method call
- Lower default values for remote search API call, E-value 0.1 and hitlist size 500
- Fix bug when parsing translations from genomes
cblaster v1.3.2
- Fixed issue with gene strandedness when fetching intermediate genes
- Check for configuration values in
extract_clusters
module
cblaster v1.3.1.6
bump version to 1.3.1.6