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Releases: gamcil/cblaster

cblaster v1.3.10

30 Sep 04:41
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  • Change default value for --percent argument to 0 from 50 to prevent confusion when no results
  • Fix parsed GFF records not being correctly converted to SQL insertion tuples, should address #63

cblaster v1.3.9

27 Jul 05:26
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  • Adds the ability to load local profile HMM files instead of just Pfam domains
  • Can now look up Pfams by family name, e.g. --query_profiles AMP-binding
  • Add local profile HMM support to GUI
  • Add example search output and small README on how to generate it
  • Change default font family of generated plot

cblaster v1.3.8

30 Jun 06:33
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  • Fix bug in preventing use of config module

cblaster v1.3.7

28 Jun 06:47
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  • Fix manually translated sequences not being cast to str, causing crash when inserting into database
  • Check feature is pseudogene before translation

cblaster v1.3.6

25 Jun 01:37
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  • Fix bug when retrieving protein translations from genomes for makedb

cblaster v1.3.5

24 Jun 09:38
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  • Fix sequences not being saved when searching with query IDs

cblaster v1.3.4

18 Jun 07:18
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  • Update extract module help
  • Use trusted cutoffs for local HMM searches

cblaster v1.3.3

16 Jun 06:34
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  • Fix bug when creating local databases from bad method call
  • Lower default values for remote search API call, E-value 0.1 and hitlist size 500
  • Fix bug when parsing translations from genomes

cblaster v1.3.2

03 Jun 08:33
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  • Fixed issue with gene strandedness when fetching intermediate genes
  • Check for configuration values in extract_clusters module

cblaster v1.3.1.6

03 Jun 08:01
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bump version to 1.3.1.6