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See https://training.galaxyproject.org +items: +- name: New topic + description: Topic summary + items: + - name: 'From reads to (pseudo) counts : guided step by step exploration' + items: [] diff --git a/topics/transcriptomics/tutorials/RNA_seq_analysis/faqs/index.md b/topics/transcriptomics/tutorials/RNA_seq_analysis/faqs/index.md new file mode 100644 index 00000000000000..2eb1fbfa021f04 --- /dev/null +++ b/topics/transcriptomics/tutorials/RNA_seq_analysis/faqs/index.md @@ -0,0 +1,3 @@ +--- +layout: faq-page +--- diff --git a/topics/transcriptomics/tutorials/RNA_seq_analysis/image/blat1.jpg b/topics/transcriptomics/tutorials/RNA_seq_analysis/image/blat1.jpg new file mode 100644 index 00000000000000..8b5a513e06a8aa Binary files /dev/null and b/topics/transcriptomics/tutorials/RNA_seq_analysis/image/blat1.jpg differ diff --git a/topics/transcriptomics/tutorials/RNA_seq_analysis/image/blat2.png b/topics/transcriptomics/tutorials/RNA_seq_analysis/image/blat2.png new file mode 100644 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b/topics/transcriptomics/tutorials/RNA_seq_analysis/tutorial.bib @@ -0,0 +1,42 @@ + +# This is the bibliography file for your tutorial. +# +# To add bibliography (bibtex) entries here, follow these steps: +# 1) Find the DOI for the article you want to cite +# 2) Go to https://doi2bib.org and fill in the DOI +# 3) Copy the resulting bibtex entry into this file +# +# To cite the example below, in your tutorial.md file +# use {% cite Batut2018 %} +# +# If you want to cite an online resourse (website etc) +# you can use the 'online' format (see below) +# +# You can remove the examples below + +@article{Batut2018, + doi = {10.1016/j.cels.2018.05.012}, + url = {https://doi.org/10.1016/j.cels.2018.05.012}, + year = {2018}, + month = jun, + publisher = {Elsevier {BV}}, + volume = {6}, + number = {6}, + pages = {752--758.e1}, + author = {B{\'{e}}r{\'{e}}nice Batut and Saskia Hiltemann and Andrea Bagnacani and Dannon Baker and Vivek Bhardwaj and + Clemens Blank and Anthony Bretaudeau and Loraine Brillet-Gu{\'{e}}guen and Martin {\v{C}}ech and John Chilton + and Dave Clements and Olivia Doppelt-Azeroual and Anika Erxleben and Mallory Ann Freeberg and Simon Gladman and + Youri Hoogstrate and Hans-Rudolf Hotz and Torsten Houwaart and Pratik Jagtap and Delphine Larivi{\`{e}}re and + Gildas Le Corguill{\'{e}} and Thomas Manke and Fabien Mareuil and Fidel Ram{\'{i}}rez and Devon Ryan and + Florian Christoph Sigloch and Nicola Soranzo and Joachim Wolff and Pavankumar Videm and Markus Wolfien and + Aisanjiang Wubuli and Dilmurat Yusuf and James Taylor and Rolf Backofen and Anton Nekrutenko and Bj\"{o}rn Gr\"{u}ning}, + title = {Community-Driven Data Analysis Training for Biology}, + journal = {Cell Systems} +} + +@online{gtn-website, + author = {GTN community}, + title = {GTN Training Materials: Collection of tutorials developed and maintained by the worldwide Galaxy community}, + url = {https://training.galaxyproject.org}, + urldate = {2021-03-24} +} diff --git 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