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Merge pull request #4736 from galaxyproject/create-pull-request/patch… #2771

Merge pull request #4736 from galaxyproject/create-pull-request/patch…

Merge pull request #4736 from galaxyproject/create-pull-request/patch… #2771

Workflow file for this run

name: Deploy Website
on:
push:
branches:
- main
schedule:
# nightly builds to keep in sync with changes to the video library
- cron: '0 0 * * *'
jobs:
deploy:
runs-on: ubuntu-latest
if: github.repository_owner == 'galaxyproject'
steps:
- uses: actions/checkout@v2
with:
fetch-depth: 0
# BEGIN Dependencies
- uses: actions/setup-python@v2
with:
python-version: '3.7'
architecture: 'x64'
- uses: ruby/setup-ruby@v1
with:
ruby-version: "3.0"
- uses: actions/setup-node@v2
with:
node-version: '19'
- uses: actions/cache@v2
with:
path: |
vendor/bundle
~/.npm
key: ${{ runner.os }}-gems-${{ hashFiles('**/Gemfile.lock') }}-node-${{ hashFiles('**/package-lock.json') }}
restore-keys: |
${{ runner.os }}-gems-${{ hashFiles('**/Gemfile.lock') }}-node-
${{ runner.os }}-gems-
- name: Install dependencies
run: |
sudo apt-get install -y build-essential libxi-dev libglu1-mesa-dev libglew-dev pkg-config # for node
gem install bundler
bundle config path vendor/bundle
bundle install --jobs 4 --retry 3
npm install
bundle pristine ffi
# END Dependencies
- name: Prepare Site Metadata
run: |
gem install bundler
python -m pip install --upgrade pip
pip install requests ephemeris
export PATH=/home/runner/.local/bin:$PATH
make annotate ACTIVATE_ENV=pwd
curl -L https://docs.google.com/spreadsheets/d/1NfZhi5Jav7kl9zFCkeb7rIC2F8xW1isruv1TeO4WpNI/export\?format\=tsv | ruby bin/prepare_feedback.rb
npm install
make rebuild-search-index ACTIVATE_ENV=pwd
cat metadata/swagger.yaml | python bin/yaml2json.py > api/swagger.json
curl --retry 5 https://gallantries.github.io/video-library/api/videos.json > metadata/video-library.json
curl --retry 5 https://gallantries.github.io/video-library/api/sessions.json > metadata/session-library.json
rdoc bin _plugins/ --output gtn_rdoc
- name: Build Site
run: |
JEKYLL_ENV=production bundle exec jekyll build --strict_front_matter -d _site/training-material
cp metadata/feedback.csv _site/training-material/api/feedback.csv
env:
GTN_FORK: ${{ github.repository_owner }}
- name: Add jupyter notebooks
run: |
# Remove our existing directory which was a placeholder
rm -rf _site/training-material/jupyter/
# Collect all notebooks into a tmp dir
mkdir /tmp/notebook/
ruby bin/filter-pyolite-safe | xargs -I{} -n1 cp '{}' /tmp/notebook
# Build the notebook site and add to deployment.
pip install jupyterlab~=3.5.1 jupyterlite==0.1.0b18 jupyterlite-xeus-sqlite==0.2.1
jupyter lite build --contents /tmp/notebook
mv _output _site/training-material/jupyter/
- name: Deploy 🚀
uses: peaceiris/actions-gh-pages@v3
with:
github_token: ${{ secrets.GITHUB_TOKEN }}
publish_dir: ./_site/training-material/
publish_branch: gh-pages