list of high profile tools to move to IUC

[martenson]

IUC (I talked to @bgruening) wants to adopt important tools from devteam repo in order to give them better treatment and maintenance. The MTS namespace is not a problem since we can upload/operate under any username we want. Let's make a list of the tools to move - this should probably include tools that we deem important and want to maintain consistently.

ping @nekrut @blankenberg @galaxyproject/iuc

first selection per @bgruening :

• freebayes
• emboss

and mapping tools comes to my mind.

[mvdbeek]

I think merging all the tools into iuc, and then moving tools that have undoubtedly better alternatives into a/the legacy folder would be a good idea.

[martenson]

per @nsoranzo

• Kraken
• Samtools
• Picard
• VCFlib
• FastQC
• Data Managers

[martenson]

what tools does 'mapping' mentioned above consist of? @bgruening

[nsoranzo]

• bwa
• bowtie2
• bowtie_wrappers (bowtie_color_wrappers may be moved to legacy IMO)

[bgruening]

👍 to @nsoranzo