Auto-include does not ignore #example# or example~ files

[peterjc]

e.g. Tar-ball contains temp files from common Unix editors:

$ planemo shed_upload --tar_only  ~/repositories/pico_galaxy/tools/nlstradamus/ && tar -xvf shed_upload.tar.gz
cp '/tmp/tmpDhxzFT' 'shed_upload.tar.gz'
#README.rst#
README.rst~
README.rst
nlstradamus.xml
tool_dependencies.xml

Either planemo needs some additional default excludes, or perhaps it could read the local .gitignore to expand the exclude list? (I would have said that was too magic, but planemo seems to do a lot of clever stuff like this already)

[jmchilton]

Indeed - seems like a good idea.

[hexylena]

+1 to gitignore, though that will definitely look like magic.

[jmchilton]

I would rather explicitly exclude *~ and #*# patterns (in an eventually overriddable way) than worry about .gitignore (I'll try to do this soon). There may in fact be derived artifacts that should be tarred up but should not be in the git repository - so I think it would be best to ignore .gitignore.