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Merge pull request #263 from galaxyproject/code_health
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Bump galaxy-tool-util dependency and check imports with Ruff
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davelopez authored Sep 28, 2024
2 parents 3b690a0 + 7dbb6ae commit 4d3b747
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Showing 2 changed files with 5 additions and 6 deletions.
9 changes: 4 additions & 5 deletions server/pyproject.toml
Original file line number Diff line number Diff line change
Expand Up @@ -7,10 +7,7 @@ warn_return_any = false
warn_unused_configs = true

[[tool.mypy.overrides]]
module = [
"galaxy.*",
"anytree.*",
]
module = ["galaxy.*", "anytree.*"]
ignore_missing_imports = true


Expand Down Expand Up @@ -38,6 +35,9 @@ unfixable = []
# Allow unused variables when underscore-prefixed.
dummy-variable-rgx = "^(_+|(_+[a-zA-Z0-9_]*[a-zA-Z0-9]+?))$"

# Enable the isort rules.
extend-select = ["I"]

[tool.ruff.format]
# Like Black, use double quotes for strings.
quote-style = "double"
Expand All @@ -64,4 +64,3 @@ docstring-code-format = true
# This only has an effect when the `docstring-code-format` setting is
# enabled.
docstring-code-line-length = "dynamic"

2 changes: 1 addition & 1 deletion server/requirements.txt
Original file line number Diff line number Diff line change
@@ -1,5 +1,5 @@
pygls==1.3.1
lxml==5.3.0
anytree==2.12.1
galaxy-tool-util==24.1.1
galaxy-tool-util==24.1.2
edam-ontology==1.25.2

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