diff --git a/_posts/2021-05-11-tool-updates.md b/_posts/2021-05-11-tool-updates.md new file mode 100644 index 000000000..01b422c1a --- /dev/null +++ b/_posts/2021-05-11-tool-updates.md @@ -0,0 +1,44 @@ +--- +site: freiburg +title: 'Galaxy Australia tool updates 2021-05-11' +tags: [tools] +supporters: + - galaxyaustralia + - melbinfo + - qcif +--- + + + + +### Tools installed + +| Section | Tool | +|---------|-----| +| **Multiple Alignments** | mummer_mummer [48823c9635a4](https://toolshed.g2.bx.psu.edu/view/iuc/mummer_mummer/48823c9635a4)
mummer_mummerplot [ebe3b0f84de9](https://toolshed.g2.bx.psu.edu/view/iuc/mummer_mummerplot/ebe3b0f84de9)
mummer_nucmer [636b049e6141](https://toolshed.g2.bx.psu.edu/view/iuc/mummer_nucmer/636b049e6141) | + +### Tools updated + +| Section | Tool | +|---------|-----| +| **BED** | bedtools [fe5b4cb8356c](https://toolshed.g2.bx.psu.edu/view/iuc/bedtools/fe5b4cb8356c) | +| **DNA Metabarcoding** | obi_annotate [f82cefbbcea5](https://toolshed.g2.bx.psu.edu/view/iuc/obi_annotate/f82cefbbcea5)
obi_clean [12baadec7809](https://toolshed.g2.bx.psu.edu/view/iuc/obi_clean/12baadec7809)
obi_convert [374fd9feb032](https://toolshed.g2.bx.psu.edu/view/iuc/obi_convert/374fd9feb032)
obi_grep [fe7ec8a3d35e](https://toolshed.g2.bx.psu.edu/view/iuc/obi_grep/fe7ec8a3d35e)
obi_illumina_pairend [83fbdf93d51e](https://toolshed.g2.bx.psu.edu/view/iuc/obi_illumina_pairend/83fbdf93d51e)
obi_ngsfilter [3bf57dadf7cd](https://toolshed.g2.bx.psu.edu/view/iuc/obi_ngsfilter/3bf57dadf7cd)
obi_sort [e614dcabd870](https://toolshed.g2.bx.psu.edu/view/iuc/obi_sort/e614dcabd870)
obi_stat [723a93febe89](https://toolshed.g2.bx.psu.edu/view/iuc/obi_stat/723a93febe89)
obi_tab [5f7003111e32](https://toolshed.g2.bx.psu.edu/view/iuc/obi_tab/5f7003111e32)
obi_uniq [ec215ed98831](https://toolshed.g2.bx.psu.edu/view/iuc/obi_uniq/ec215ed98831) | +| **Get Data** | sra_tools [69ebb7f46e45](https://toolshed.g2.bx.psu.edu/view/iuc/sra_tools/69ebb7f46e45) | +| **Mapping** | bwa [64f11cf59c6e](https://toolshed.g2.bx.psu.edu/view/devteam/bwa/64f11cf59c6e) | +| **Proteomics** | cardinal_classification [ece627528a78](https://toolshed.g2.bx.psu.edu/view/galaxyp/cardinal_classification/ece627528a78)
cardinal_combine [a8ecb52264c4](https://toolshed.g2.bx.psu.edu/view/galaxyp/cardinal_combine/a8ecb52264c4) | +| **RAD-seq** | stacks2_sstacks [cd034465d4a4](https://toolshed.g2.bx.psu.edu/view/iuc/stacks2_sstacks/cd034465d4a4) |