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analysis: update docs + add validation analysis #11

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@korikuzma korikuzma commented May 21, 2024

close #10

I'm not sure if this will actually become it's own python package or if we'll just leverage ClinVar This for everything, but decided to go ahead and use the python project template

@ahwagner @larrybabb Is there additional documentation you'd like me to add?

@korikuzma korikuzma self-assigned this May 21, 2024
Comment on lines +8 to +19
A submission tool for submitting to the ClinVar Submission API using [GA4GH Genomic
Knowledge Standards](https://www.ga4gh.org/work_stream/genomic-knowledge-standards/)
(GKS) data.

Development of a shared, open-source software package for managing these submissions
that can be easily configured for use by multiple submitters would be highly impactful
as development and adoption of the GKS framework grows.

![image](./misc/images/GKS-ClinVar%20submission%20overview.png)

We plan to contribute to [ClinVar This](https://github.com/varfish-org/clinvar-this) to
support GKS data stored as [JSON Lines](https://jsonlines.org/) files.
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General overview. Should I add anything else?

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I think this looks great.

@korikuzma korikuzma added the priority:medium Medium priority label May 21, 2024
@korikuzma korikuzma linked an issue May 21, 2024 that may be closed by this pull request
@korikuzma korikuzma changed the title feat: incorporate python project template analysis: update docs + add validation analysis May 28, 2024
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Add documentation
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