Failed to convert

[pvaras8]

Following the tutorial, when I execute this line of code: smiles_list = docking(smiles_folder = results_folder, smiles_file = smiles_file, args_dict = vars) the following error appears:setting PYTHONHOME environment
Failed to convert 0 times: ./results_4r6e_000_PDB/5978009__1.pdb
Failed to convert 0 times: ./results_4r6e_000_PDB/5155218__4.pdb
Failed to convert 0 times: ./results_4r6e_000_PDB/2065594__1.pdb
Failed to convert 0 times: ./results_4r6e_000_PDB/7918451__1.pdb
Failed to convert 0 times: ./results_4r6e_000_PDB/4485828__2.pdb
Failed to convert 0 times: ./results_4r6e_000_PDB/9066744__1.pdb
Failed to convert 0 times: ./results_4r6e_000_PDB/9592795__2.pdb
Failed to convert 0 times: ./results_4r6e_000_PDB/3884053__2.pdb
Failed to convert 0 times: ./results_4r6e_000_PDB/7918451__4.pdb
Failed to convert 0 times: ./results_4r6e_000_PDB/5867488__1.pdb
Failed to convert 0 times: ./results_4r6e_000_PDB/8905482__2.pdb
Failed to convert 0 times: ./results_4r6e_000_PDB/4025756__1.pdb
Failed to convert 0 times: ./results_4r6e_000_PDB/2719455__3.pdb
Failed to convert 0 times: ./results_4r6e_000_PDB/1200527__4.pdb
Failed to convert 0 times: ./results_4r6e_000_PDB/7292583__4.pdb
Failed to convert 0 times: ./results_4r6e_000_PDB/7595926__1.pdb
Failed to convert 0 times: ./results_4r6e_000_PDB/8424926__1.pdb
Failed to convert 0 times: ./results_4r6e_000_PDB/8095622__1.pdb
Failed to convert 0 times: ./results_4r6e_000_PDB/7872732__1.pdb
Failed to convert 0 times: ./results_4r6e_000_PDB/4691782__4.pdb
Failed to convert 0 times: ./results_4r6e_000_PDB/2073335__1.pdb
Failed to convert 0 times: ./results_4r6e_000_PDB/9980521__1.pdb
Failed to convert 0 times: ./results_4r6e_000_PDB/3098257__1.pdb
Failed to convert 0 times: ./results_4r6e_000_PDB/6056760__4.pdb
Failed to convert 0 times: ./results_4r6e_000_PDB/4024833__2.pdb
Failed to convert 0 times: ./results_4r6e_000_PDB/4024833__1.pdb
Failed to convert 0 times: ./results_4r6e_000_PDB/1653654__3.pdb
Failed to convert 0 times: ./results_4r6e_000_PDB/8181518__4.pdb
Failed to convert 0 times: ./results_4r6e_000_PDB/8625472__1.pdb
Failed to convert 0 times: ./results_4r6e_000_PDB/2442229__1.pdb
Failed to convert 0 times: ./results_4r6e_000_PDB/6354861__1.pdb
Failed to convert 0 times: ./results_4r6e_000_PDB/5809515__5.pdb
Failed to convert 0 times: ./results_4r6e_000_PDB/7851679__1.pdb
Failed to convert 0 times: ./results_4r6e_000_PDB/7107562__4.pdb
Failed to convert 0 times: ./results_4r6e_000_PDB/9490483__1.pdb
Failed to convert 0 times: ./results_4r6e_000_PDB/7107562__3.pdb

Can you help me with this?

[MorganCThomas]

I got this error and fixed it by using downloading mgltools 1.5.6 instead of the latest version 1.5.7 which for some reason didn't seem to have the Utilities scripts Autogrow needs.

[pvaras8]

Thank you very much!! I solved the error thanks to your message