From f233be27a63583e52656effd570f09de3880b657 Mon Sep 17 00:00:00 2001 From: tfenne Date: Fri, 8 Dec 2023 09:51:02 -0700 Subject: [PATCH] Fixing some whitespace --- src/main/scala/com/fulcrumgenomics/umi/GroupReadsByUmi.scala | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/src/main/scala/com/fulcrumgenomics/umi/GroupReadsByUmi.scala b/src/main/scala/com/fulcrumgenomics/umi/GroupReadsByUmi.scala index 5b0ee69cd..2a0520ef1 100644 --- a/src/main/scala/com/fulcrumgenomics/umi/GroupReadsByUmi.scala +++ b/src/main/scala/com/fulcrumgenomics/umi/GroupReadsByUmi.scala @@ -584,8 +584,8 @@ class GroupReadsByUmi @arg(flag='x', doc= """ |DEPRECATED: this option will be removed in future versions and inter-contig reads will be |automatically processed.""") - @deprecated val allowInterContig: Boolean = true, -@arg(flag='@', doc="Number of threads to use when comparing UMIs. Only recommended for amplicon or similar data.") val threads: Int = 1, + @deprecated val allowInterContig: Boolean = true, + @arg(flag='@', doc="Number of threads to use when comparing UMIs. Only recommended for amplicon or similar data.") val threads: Int = 1, )extends FgBioTool with LazyLogging { import GroupReadsByUmi._