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@fraser-lab

Fraser Lab

The Fraser Lab at UCSF

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  1. EMRinger EMRinger Public

    Scripts to run EMRinger, as well as the scripts to generate the EMRinger manuscript figures.

    Python 6 1

  2. solution_scattering solution_scattering Public

    Data analysis for solution scattering experiments.

    Python 1 5

  3. ROSETTA_EM_REFINEMENT ROSETTA_EM_REFINEMENT Public

    Scripts for EM Refinement in Rosetta

    Python 4

  4. plumed_em_md plumed_em_md Public

    C 4 2

  5. qptm qptm Public

    quantification of posttranscriptional modifications

    Python 4

  6. fraser-lab.github.io fraser-lab.github.io Public

    Fraser Lab website

    HTML 36 135

Repositories

Showing 10 of 28 repositories
  • fraser-lab.github.io Public

    Fraser Lab website

    fraser-lab/fraser-lab.github.io’s past year of commit activity
    HTML 36 MIT 135 15 (2 issues need help) 0 Updated Dec 8, 2024
  • ADP3D-ensemble Public

    Extending the results of Levy et al. 2024 to sample protein conformational ensembles.

    fraser-lab/ADP3D-ensemble’s past year of commit activity
    Jupyter Notebook 0 MIT 0 0 0 Updated Nov 9, 2024
  • MET_kinase_Inhibitor_DMS Public

    Source code for the MET kinase domain inhibitor DMS

    fraser-lab/MET_kinase_Inhibitor_DMS’s past year of commit activity
    R 1 MIT 0 0 0 Updated Jul 19, 2024
  • qFit_biological_testset Public
    fraser-lab/qFit_biological_testset’s past year of commit activity
    Python 0 MIT 0 0 0 Updated Jul 15, 2024
  • MET_KinaseDomain_DMS Public

    DMS fitness scores and analysis for the MET kinase domain

    fraser-lab/MET_KinaseDomain_DMS’s past year of commit activity
    R 2 MIT 0 0 0 Updated Sep 16, 2023
  • EMRingerWeb Public

    Web server for EMRinger

    fraser-lab/EMRingerWeb’s past year of commit activity
    JavaScript 0 0 1 2 Updated May 1, 2023
  • Apo_Holo_Analysis Public

    Scripts for paper on Apo/Holo Pairs

    fraser-lab/Apo_Holo_Analysis’s past year of commit activity
    Shell 8 0 0 0 Updated Sep 15, 2022
  • VatA_enrich2 Public
    fraser-lab/VatA_enrich2’s past year of commit activity
    Python 0 0 0 0 Updated Aug 20, 2022
  • curiosity Public

    cctbx-based tool for discovery of interesting features in electron density or electrostatic potential maps

    fraser-lab/curiosity’s past year of commit activity
    Python 0 BSD-3-Clause 1 0 0 Updated Mar 31, 2022
  • holton_scripts Public
    fraser-lab/holton_scripts’s past year of commit activity
    Shell 0 BSD-3-Clause 1 1 0 Updated Aug 9, 2021
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