Building wheel for batman-package & starry #99
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darinadaly
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darinadaly
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dfm
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Unfortunately this doesn't seem to be an First, a few comments:
To deal with compilation issues like this, I generally recommend trying to setup a fresh conda environment following the steps given in the docs. If that doesn't work, you should try looking into the errors being produced when compiling |
darinadaly
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Thank you for the suggestion! My apologies for misunderstanding, I am very new to coding. Actually my main issue now seems to be with theano when I run Exception: ('The following error happened while compiling the node', Elemwise{Mul}[(0, 1)](InplaceDimShuffle{x,0}.0, Reshape{2}.0), '\n', "Compilation failed (return status=1): /Users/darinadaly/.theano/compiledir_macOS-10.15.4-x86_64-i386-64bit-i386-3.8.2-64/tmp0hztfhbh/mod.cpp:463:27: error: non-constant-expression cannot be narrowed from type 'npy_intp' (aka 'long') to 'int' in initializer list [-Wc++11-narrowing]. int init_totals[2] = {V5_n0, V3_n1};. ^~~~~. /Users/darinadaly/.theano/compiledir_macOS-10.15.4-x86_64-i386-64bit-i386-3.8.2-64/tmp0hztfhbh/mod.cpp:463:27: note: insert an explicit cast to silence this issue. int init_totals[2] = {V5_n0, V3_n1};. ^~~~~. static_cast( ). /Users/darinadaly/.theano/compiledir_macOS-10.15.4-x86_64-i386-64bit-i386-3.8.2-64/tmp0hztfhbh/mod.cpp:463:34: error: non-constant-expression cannot be narrowed from type 'npy_intp' (aka 'long') to 'int' in initializer list [-Wc++11-narrowing]. int init_totals[2] = {V5_n0, V3_n1};. ^~~~~. /Users/darinadaly/.theano/compiledir_macOS-10.15.4-x86_64-i386-64bit-i386-3.8.2-64/tmp0hztfhbh/mod.cpp:463:34: note: insert an explicit cast to silence this issue. int init_totals[2] = {V5_n0, V3_n1};. ^~~~~. static_cast( ). /Users/darinadaly/.theano/compiledir_macOS-10.15.4-x86_64-i386-64bit-i386-3.8.2-64/tmp0hztfhbh/mod.cpp:475:12: error: non-constant-expression cannot be narrowed from type 'ssize_t' (aka 'long') to 'int' in initializer list [-Wc++11-narrowing]. 0, V3_stride1, . ^~~~~~~~~~. /Users/darinadaly/.theano/compiledir_macOS-10.15.4-x86_64-i386-64bit-i386-3.8.2-64/tmp0hztfhbh/mod.cpp:475:12: note: insert an explicit cast to silence this issue. 0, V3_stride1, . ^~~~~~~~~~. static_cast( ). /Users/darinadaly/.theano/compiledir_macOS-10.15.4-x86_64-i386-64bit-i386-3.8.2-64/tmp0hztfhbh/mod.cpp:476:1: error: non-constant-expression cannot be narrowed from type 'ssize_t' (aka 'long') to 'int' in initializer list [-Wc++11-narrowing]. V5_stride0, V5_stride1. ^~~~~~~~~~. /Users/darinadaly/.theano/compiledir_macOS-10.15.4-x86_64-i386-64bit-i386-3.8.2-64/tmp0hztfhbh/mod.cpp:476:1: note: insert an explicit cast to silence this issue. V5_stride0, V5_stride1. ^~~~~~~~~~. static_cast( ). /Users/darinadaly/.theano/compiledir_macOS-10.15.4-x86_64-i386-64bit-i386-3.8.2-64/tmp0hztfhbh/mod.cpp:476:13: error: non-constant-expression cannot be narrowed from type 'ssize_t' (aka 'long') to 'int' in initializer list [-Wc++11-narrowing]. V5_stride0, V5_stride1. ^~~~~~~~~~. /Users/darinadaly/.theano/compiledir_macOS-10.15.4-x86_64-i386-64bit-i386-3.8.2-64/tmp0hztfhbh/mod.cpp:476:13: note: insert an explicit cast to silence this issue. V5_stride0, V5_stride1. ^~~~~~~~~~. static_cast( ). 5 errors generated.. ", '[Elemwise{Mul}[(0, 1)](<TensorType(float64, row)>, <TensorType(float64, matrix)>)]') |
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No worries! It looks like you need to upgrade PyMC3 or add the following before you import exoplanet: import theano.config
theano.config.gcc.cxxflags = "-Wno-c++11-narrowing"Ref: pymc-devs/pymc#3695 |
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This worked! Thank you so much! |
MacOS Catalina (10.15.4)
Python 3.8.2
pip 20.1.1
(Not sure if this is actually a bug, but I accidentally labeled it and don't know how to remove it now)
I ran (in bash)
and came across the error:
I looked at issue #72 and tried
pip install reboundbut was stopped at
ERROR: Command errored out with exit status 1: /Users/darinadaly/miniconda3/envs/project2/bin/python3.8 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/private/var/folders/k6/2hd432893sd6_hjfyzr6v6440000gn/T/pip-install-nz7vzsez/rebound/setup.py'"'"'; __file__='"'"'/private/var/folders/k6/2hd432893sd6_hjfyzr6v6440000gn/T/pip-install-nz7vzsez/rebound/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' install --record /private/var/folders/k6/2hd432893sd6_hjfyzr6v6440000gn/T/pip-record-94_ct0i2/install-record.txt --single-version-externally-managed --compile --install-headers /Users/darinadaly/miniconda3/envs/project2/include/python3.8/rebound Check the logs for full command output.I also tried running
pip install --no-deps exoplanetbut it didn't fix anything.If I just run
python -m pytest -vx tests, thentests/light_curves_test.py::test_light_curve_grad(and other tests) fails and I get the error:ERROR: Command errored out with exit status 1: /Users/darinadaly/miniconda3/envs/project2/bin/python3.8 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/private/var/folders/k6/2hd432893sd6_hjfyzr6v6440000gn/T/pip-install-nz7vzsez/rebound/setup.py'"'"'; __file__='"'"'/private/var/folders/k6/2hd432893sd6_hjfyzr6v6440000gn/T/pip-install-nz7vzsez/rebound/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' install --record /private/var/folders/k6/2hd432893sd6_hjfyzr6v6440000gn/T/pip-record-94_ct0i2/install-record.txt --single-version-externally-managed --compile --install-headers /Users/darinadaly/miniconda3/envs/project2/include/python3.8/rebound Check the logs for full command output.The text was updated successfully, but these errors were encountered: