Validations-R.yml

name: Validations (R)

on:
  workflow_dispatch:
  pull_request:
    branches: main
    paths:
      - 'data-processed/**'

jobs:
  validate-submission:
    runs-on: ubuntu-latest
    env:
      GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}

    steps:
      - uses: actions/checkout@v3

      - uses: r-lib/actions/setup-r@v2
        with:
          install-r: false
          use-public-rspm: true

      - name: Install system dependencies
        run: |
          sudo apt-get update
          sudo apt-get install libcurl4-openssl-dev libv8-dev libharfbuzz-dev libfribidi-dev

      - uses: r-lib/actions/setup-renv@v2

      - name: Run validations
        env:
          PR_NUMBER: ${{ github.event.number }}
        run: |
          if (nchar(Sys.getenv("PR_NUMBER")) > 0) {
            v <- HubValidations::validate_pr(
                gh_repo = Sys.getenv("GITHUB_REPOSITORY"),
                pr_number = Sys.getenv("PR_NUMBER"),
                data_folder = "data-processed",
                metadata_folder = "model-metadata",
                abstract_folder = "model-abstracts"
            )
          } else {
            v <- HubValidations::validate_repository()
          }
          HubValidations::check_for_errors(v)
        shell: Rscript {0}