Mock Version: 2.1 Mock Version: 2.1 Mock Version: 2.1 ENTER ['do_with_status'](['bash', '--login', '-c', '/usr/bin/rpmbuild -bs --target x86_64 --nodeps /builddir/build/SPECS/espresso.spec'], chrootPath='/var/lib/mock/f33-build-21042873-1585543/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8'}shell=Falselogger=timeout=201600uid=1000gid=425user='mockbuild'nspawn_args=[]unshare_net=TrueprintOutput=False) Executing command: ['bash', '--login', '-c', '/usr/bin/rpmbuild -bs --target x86_64 --nodeps /builddir/build/SPECS/espresso.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8'} and shell False Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1591315200 Wrote: /builddir/build/SRPMS/espresso-4.1.2-4.fc33.src.rpm Child return code was: 0 ENTER ['do_with_status'](['bash', '--login', '-c', '/usr/bin/rpmbuild -bb --target x86_64 --nodeps /builddir/build/SPECS/espresso.spec'], chrootPath='/var/lib/mock/f33-build-21042873-1585543/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8'}shell=Falselogger=timeout=201600uid=1000gid=425user='mockbuild'nspawn_args=[]unshare_net=TrueprintOutput=False) Executing command: ['bash', '--login', '-c', '/usr/bin/rpmbuild -bb --target x86_64 --nodeps /builddir/build/SPECS/espresso.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8'} and shell False Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1591315200 Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.HhzLJM + umask 022 + cd /builddir/build/BUILD + cd /builddir/build/BUILD + rm -rf espresso + /usr/bin/gzip -dc /builddir/build/SOURCES/espresso-4.1.2.tar.gz + /usr/bin/tar -xof - + STATUS=0 + '[' 0 -ne 0 ']' + cd espresso + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . Patch #0 (3725.patch): + echo 'Patch #0 (3725.patch):' + /usr/bin/patch --no-backup-if-mismatch -p1 --fuzz=0 patching file src/script_interface/Variant.hpp + RPM_EC=0 ++ jobs -p + exit 0 Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.5uCTOO + umask 022 + cd /builddir/build/BUILD + cd espresso + for mpi in mpich openmpi + module load mpi/mpich-x86_64 ++ /usr/share/lmod/lmod/libexec/lmod bash load mpi/mpich-x86_64 + eval '__LMOD_REF_COUNT_LD_LIBRARY_PATH=/usr/lib64/mpich/lib:1;' export '__LMOD_REF_COUNT_LD_LIBRARY_PATH;' 'LD_LIBRARY_PATH=/usr/lib64/mpich/lib;' export 'LD_LIBRARY_PATH;' '__LMOD_REF_COUNT_LOADEDMODULES=mpi/mpich-x86_64:1;' export '__LMOD_REF_COUNT_LOADEDMODULES;' 'LOADEDMODULES=mpi/mpich-x86_64;' export 'LOADEDMODULES;' '__LMOD_REF_COUNT_MANPATH=/usr/share/man/mpich-x86_64:1\;/usr/share/lmod/lmod/share/man:1;' export '__LMOD_REF_COUNT_MANPATH;' 'MANPATH=:/usr/share/man/mpich-x86_64:/usr/share/lmod/lmod/share/man;' export 'MANPATH;' '__LMOD_REF_COUNT_MODULEPATH=/etc/modulefiles:1\;/usr/share/modulefiles:1\;/usr/share/modulefiles/Linux:1\;/usr/share/modulefiles/Core:1\;/usr/share/lmod/lmod/modulefiles/Core:1;' export '__LMOD_REF_COUNT_MODULEPATH;' 'MODULEPATH=/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core;' export 'MODULEPATH;' 'MPI_BIN=/usr/lib64/mpich/bin;' export 'MPI_BIN;' 'MPI_COMPILER=mpich-x86_64;' export 'MPI_COMPILER;' 'MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/mpich;' export 'MPI_FORTRAN_MOD_DIR;' 'MPI_HOME=/usr/lib64/mpich;' export 'MPI_HOME;' 'MPI_INCLUDE=/usr/include/mpich-x86_64;' export 'MPI_INCLUDE;' 'MPI_LIB=/usr/lib64/mpich/lib;' export 'MPI_LIB;' 'MPI_MAN=/usr/share/man/mpich-x86_64;' export 'MPI_MAN;' 'MPI_PYTHON2_SITEARCH=%\{python2_sitearch\}/mpich;' export 'MPI_PYTHON2_SITEARCH;' 'MPI_PYTHON3_SITEARCH=/usr/lib64/python3.9/site-packages/mpich;' export 'MPI_PYTHON3_SITEARCH;' 'MPI_PYTHON_SITEARCH=%\{python2_sitearch\}/mpich;' export 'MPI_PYTHON_SITEARCH;' 'MPI_SUFFIX=_mpich;' export 'MPI_SUFFIX;' 'MPI_SYSCONFIG=/etc/mpich-x86_64;' export 'MPI_SYSCONFIG;' '__LMOD_REF_COUNT_PATH=/usr/lib64/mpich/bin:1\;/usr/bin:1\;/bin:1\;/usr/sbin:1\;/sbin:1\;/usr/local/sbin:1;' export '__LMOD_REF_COUNT_PATH;' 'PATH=/usr/lib64/mpich/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin;' export 'PATH;' '__LMOD_REF_COUNT_PKG_CONFIG_PATH=/usr/lib64/mpich/lib/pkgconfig:1\;/usr/lib64/pkgconfig:1\;/usr/share/pkgconfig:1;' export '__LMOD_REF_COUNT_PKG_CONFIG_PATH;' 'PKG_CONFIG_PATH=/usr/lib64/mpich/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig;' export 'PKG_CONFIG_PATH;' '__LMOD_REF_COUNT__LMFILES_=/usr/share/modulefiles/mpi/mpich-x86_64:1;' export '__LMOD_REF_COUNT__LMFILES_;' '_LMFILES_=/usr/share/modulefiles/mpi/mpich-x86_64;' export '_LMFILES_;' '_ModuleTable001_=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;' export '_ModuleTable001_;' '_ModuleTable002_=bGVmaWxlcy9Db3JlIiwiL3Vzci9zaGFyZS9sbW9kL2xtb2QvbW9kdWxlZmlsZXMvQ29yZSIsfSxbInN5c3RlbUJhc2VNUEFUSCJdPSIvZXRjL21vZHVsZWZpbGVzOi91c3Ivc2hhcmUvbW9kdWxlZmlsZXM6L3Vzci9zaGFyZS9tb2R1bGVmaWxlcy9MaW51eDovdXNyL3NoYXJlL21vZHVsZWZpbGVzL0NvcmU6L3Vzci9zaGFyZS9sbW9kL2xtb2QvbW9kdWxlZmlsZXMvQ29yZSIsfQ==;' export '_ModuleTable002_;' '_ModuleTable_Sz_=2;' export '_ModuleTable_Sz_;' ++ __LMOD_REF_COUNT_LD_LIBRARY_PATH=/usr/lib64/mpich/lib:1 ++ export __LMOD_REF_COUNT_LD_LIBRARY_PATH ++ LD_LIBRARY_PATH=/usr/lib64/mpich/lib ++ export LD_LIBRARY_PATH ++ __LMOD_REF_COUNT_LOADEDMODULES=mpi/mpich-x86_64:1 ++ export __LMOD_REF_COUNT_LOADEDMODULES ++ LOADEDMODULES=mpi/mpich-x86_64 ++ export LOADEDMODULES ++ __LMOD_REF_COUNT_MANPATH='/usr/share/man/mpich-x86_64:1;/usr/share/lmod/lmod/share/man:1' ++ export __LMOD_REF_COUNT_MANPATH ++ MANPATH=:/usr/share/man/mpich-x86_64:/usr/share/lmod/lmod/share/man ++ export MANPATH ++ __LMOD_REF_COUNT_MODULEPATH='/etc/modulefiles:1;/usr/share/modulefiles:1;/usr/share/modulefiles/Linux:1;/usr/share/modulefiles/Core:1;/usr/share/lmod/lmod/modulefiles/Core:1' ++ export __LMOD_REF_COUNT_MODULEPATH ++ MODULEPATH=/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core ++ export MODULEPATH ++ MPI_BIN=/usr/lib64/mpich/bin ++ export MPI_BIN ++ MPI_COMPILER=mpich-x86_64 ++ export MPI_COMPILER ++ MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/mpich ++ export MPI_FORTRAN_MOD_DIR ++ MPI_HOME=/usr/lib64/mpich ++ export MPI_HOME ++ MPI_INCLUDE=/usr/include/mpich-x86_64 ++ export MPI_INCLUDE ++ MPI_LIB=/usr/lib64/mpich/lib ++ export MPI_LIB ++ MPI_MAN=/usr/share/man/mpich-x86_64 ++ export MPI_MAN ++ MPI_PYTHON2_SITEARCH='%{python2_sitearch}/mpich' ++ export MPI_PYTHON2_SITEARCH ++ MPI_PYTHON3_SITEARCH=/usr/lib64/python3.9/site-packages/mpich ++ export MPI_PYTHON3_SITEARCH ++ MPI_PYTHON_SITEARCH='%{python2_sitearch}/mpich' ++ export MPI_PYTHON_SITEARCH ++ MPI_SUFFIX=_mpich ++ export MPI_SUFFIX ++ MPI_SYSCONFIG=/etc/mpich-x86_64 ++ export MPI_SYSCONFIG ++ __LMOD_REF_COUNT_PATH='/usr/lib64/mpich/bin:1;/usr/bin:1;/bin:1;/usr/sbin:1;/sbin:1;/usr/local/sbin:1' ++ export __LMOD_REF_COUNT_PATH ++ PATH=/usr/lib64/mpich/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin ++ export PATH ++ __LMOD_REF_COUNT_PKG_CONFIG_PATH='/usr/lib64/mpich/lib/pkgconfig:1;/usr/lib64/pkgconfig:1;/usr/share/pkgconfig:1' ++ export __LMOD_REF_COUNT_PKG_CONFIG_PATH ++ PKG_CONFIG_PATH=/usr/lib64/mpich/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig ++ export PKG_CONFIG_PATH ++ __LMOD_REF_COUNT__LMFILES_=/usr/share/modulefiles/mpi/mpich-x86_64:1 ++ export __LMOD_REF_COUNT__LMFILES_ ++ _LMFILES_=/usr/share/modulefiles/mpi/mpich-x86_64 ++ export _LMFILES_ ++ _ModuleTable001_=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 ++ export _ModuleTable001_ ++ _ModuleTable002_=bGVmaWxlcy9Db3JlIiwiL3Vzci9zaGFyZS9sbW9kL2xtb2QvbW9kdWxlZmlsZXMvQ29yZSIsfSxbInN5c3RlbUJhc2VNUEFUSCJdPSIvZXRjL21vZHVsZWZpbGVzOi91c3Ivc2hhcmUvbW9kdWxlZmlsZXM6L3Vzci9zaGFyZS9tb2R1bGVmaWxlcy9MaW51eDovdXNyL3NoYXJlL21vZHVsZWZpbGVzL0NvcmU6L3Vzci9zaGFyZS9sbW9kL2xtb2QvbW9kdWxlZmlsZXMvQ29yZSIsfQ== ++ export _ModuleTable002_ ++ _ModuleTable_Sz_=2 ++ export _ModuleTable_Sz_ ~/build/BUILD/espresso/mpich ~/build/BUILD/espresso ++ : -s sh + eval + mkdir mpich + pushd mpich + old_LDFLAGS= + export 'LDFLAGS= -Wl,-rpath,/usr/lib64/python3.9/site-packages/mpich/espressomd' + LDFLAGS=' -Wl,-rpath,/usr/lib64/python3.9/site-packages/mpich/espressomd' + CFLAGS='-O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection' + export CFLAGS + CXXFLAGS='-O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection' + export CXXFLAGS + FFLAGS='-O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -I/usr/lib64/gfortran/modules' + export FFLAGS + FCFLAGS='-O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -I/usr/lib64/gfortran/modules' + export FCFLAGS + LDFLAGS=' -Wl,-rpath,/usr/lib64/python3.9/site-packages/mpich/espressomd' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + /usr/bin/cmake -DCMAKE_C_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_CXX_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_Fortran_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_VERBOSE_MAKEFILE:BOOL=ON -DCMAKE_INSTALL_PREFIX:PATH=/usr -DINCLUDE_INSTALL_DIR:PATH=/usr/include -DLIB_INSTALL_DIR:PATH=/usr/lib64 -DSYSCONF_INSTALL_DIR:PATH=/etc -DSHARE_INSTALL_PREFIX:PATH=/usr/share -DLIB_SUFFIX=64 -DBUILD_SHARED_LIBS:BOOL=ON -DWITH_PYTHON=ON -DPYTHON_EXECUTABLE=/usr/bin/python3 -DWITH_TESTS=ON -DCMAKE_SKIP_RPATH=ON -DINSTALL_PYPRESSO=OFF -DCYTHON_EXECUTABLE=/usr/bin/cython -DLIBDIR=/usr/lib64/mpich/lib -DPYTHON_INSTDIR=/usr/lib64/python3.9/site-packages/mpich .. CMake Warning (dev) at /usr/share/cmake/Modules/GNUInstallDirs.cmake:225 (message): Unable to determine default CMAKE_INSTALL_LIBDIR directory because no target architecture is known. Please enable at least one language before including GNUInstallDirs. Call Stack (most recent call first): CMakeLists.txt:23 (include) This warning is for project developers. Use -Wno-dev to suppress it. -- The C compiler identification is GNU 10.1.1 -- The CXX compiler identification is GNU 10.1.1 -- Check for working C compiler: /usr/bin/gcc -- Check for working C compiler: /usr/bin/gcc - works -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Detecting C compile features -- Detecting C compile features - done -- Check for working CXX compiler: /usr/bin/g++ -- Check for working CXX compiler: /usr/bin/g++ - works -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Detecting CXX compile features -- Detecting CXX compile features - done -- Config file: /builddir/build/BUILD/espresso/src/config/myconfig-default.hpp -- Performing Test result__PRETTY_FUNCTION__ -- Performing Test result__PRETTY_FUNCTION__ - Success CUDA_TOOLKIT_ROOT_DIR not found or specified -- Could NOT find CUDA (missing: CUDA_TOOLKIT_ROOT_DIR CUDA_NVCC_EXECUTABLE CUDA_INCLUDE_DIRS CUDA_CUDART_LIBRARY) (Required is at least version "9.0") -- Found PythonInterp: /usr/bin/python3 (found suitable version "3.9", minimum required is "3.3") -- Found PythonInterp: /usr/bin/python3 (found version "3.9") -- Found Cython version 0.29.19 -- Found Cython: /usr/bin/cython (Required is at least version "0.23") -- Found NumPy: /usr/lib64/python3.9/site-packages/numpy/core/include (found version "1.19.0rc2") -- NumPy ver. 1.19.0rc2 found (include: /usr/lib64/python3.9/site-packages/numpy/core/include) -- Found FFTW3: /usr/lib64/libfftw3.so -- HDF5: Using hdf5 compiler wrapper to determine C configuration -- Found HDF5: /usr/lib64/mpich/lib/libhdf5.so (found suitable version "1.10.5", minimum required is "1.8") found components: C -- Found PY_h5py: /usr/lib64/python3.9/site-packages/h5py -- Found PkgConfig: /usr/bin/pkg-config (found version "1.7.0") -- Found GSL: /usr/include (found version "2.6") -- Found MPI_C: /usr/lib64/mpich/lib/libmpi.so (found suitable version "3.1", minimum required is "3.0") -- Found MPI_CXX: /usr/lib64/mpich/lib/libmpicxx.so (found suitable version "3.1", minimum required is "3.0") -- Found MPI: TRUE (found suitable version "3.1", minimum required is "3.0") -- Found Boost: /usr/include (found suitable version "1.73.0", minimum required is "1.55.0") found components: mpi serialization filesystem system unit_test_framework -- Could NOT find Doxygen (missing: DOXYGEN_EXECUTABLE) -- Could NOT find Sphinx (missing: SPHINX_EXECUTABLE SPHINX_API_DOC_EXE) (Required is at least version "1.6.6") -- Could NOT find Git (missing: GIT_EXECUTABLE) -- The following features have been enabled: * HDF5 (required version >= 1.8), parallel -- The following OPTIONAL packages have been found: * FFTW3 * HDF5 (required version >= 1.8), parallel * PkgConfig * GSL -- The following REQUIRED packages have been found: * PythonInterp * Cython (required version >= 0.23) * NumPy * MPI (required version >= 3.0) * Boost (required version >= 1.55.0) -- The following OPTIONAL packages have not been found: * CUDA (required version >= 9.0) * Doxygen * Sphinx (required version >= 1.6.6) * Git -- Configuring done -- Generating done CMake Warning: Manually-specified variables were not used by the project: CMAKE_C_FLAGS_RELEASE CMAKE_Fortran_FLAGS_RELEASE INCLUDE_INSTALL_DIR LIBDIR LIB_INSTALL_DIR LIB_SUFFIX SHARE_INSTALL_PREFIX SYSCONF_INSTALL_DIR -- Build files have been written to: /builddir/build/BUILD/espresso/mpich + LD_LIBRARY_PATH=/builddir/build/BUILD/espresso/mpich/src/config + /usr/bin/make -O -j1 V=1 VERBOSE=1 /usr/bin/cmake -S/builddir/build/BUILD/espresso -B/builddir/build/BUILD/espresso/mpich --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/espresso/mpich/CMakeFiles /builddir/build/BUILD/espresso/mpich/CMakeFiles/progress.marks /usr/bin/make -f CMakeFiles/Makefile2 all make[1]: Entering directory '/builddir/build/BUILD/espresso/mpich' /usr/bin/make -f src/pdbparser/CMakeFiles/pdbparser.dir/build.make src/pdbparser/CMakeFiles/pdbparser.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/pdbparser /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/pdbparser /builddir/build/BUILD/espresso/mpich/src/pdbparser/CMakeFiles/pdbparser.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/espresso/mpich/src/pdbparser/CMakeFiles/pdbparser.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/espresso/mpich/src/pdbparser/CMakeFiles/pdbparser.dir/depend.internal". Dependee "/builddir/build/BUILD/espresso/mpich/src/pdbparser/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/espresso/mpich/src/pdbparser/CMakeFiles/pdbparser.dir/depend.internal". Scanning dependencies of target pdbparser make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' /usr/bin/make -f src/pdbparser/CMakeFiles/pdbparser.dir/build.make src/pdbparser/CMakeFiles/pdbparser.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' [ 0%] Building CXX object src/pdbparser/CMakeFiles/pdbparser.dir/src/PdbParser.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/pdbparser && /usr/bin/g++ -Dpdbparser_EXPORTS -I/builddir/build/BUILD/espresso/src/pdbparser/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -std=c++14 -o CMakeFiles/pdbparser.dir/src/PdbParser.cpp.o -c /builddir/build/BUILD/espresso/src/pdbparser/src/PdbParser.cpp [ 1%] Linking CXX shared library pdbparser.so cd /builddir/build/BUILD/espresso/mpich/src/pdbparser && /usr/bin/cmake -E cmake_link_script CMakeFiles/pdbparser.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -Wl,-rpath,/usr/lib64/python3.9/site-packages/mpich/espressomd -shared -Wl,-soname,pdbparser.so -o pdbparser.so CMakeFiles/pdbparser.dir/src/PdbParser.cpp.o make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 1%] Built target pdbparser /usr/bin/make -f src/config/CMakeFiles/generate_config_features.dir/build.make src/config/CMakeFiles/generate_config_features.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/config /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/config /builddir/build/BUILD/espresso/mpich/src/config/CMakeFiles/generate_config_features.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/espresso/mpich/src/config/CMakeFiles/generate_config_features.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/espresso/mpich/src/config/CMakeFiles/generate_config_features.dir/depend.internal". Dependee "/builddir/build/BUILD/espresso/mpich/src/config/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/espresso/mpich/src/config/CMakeFiles/generate_config_features.dir/depend.internal". Scanning dependencies of target generate_config_features make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' /usr/bin/make -f src/config/CMakeFiles/generate_config_features.dir/build.make src/config/CMakeFiles/generate_config_features.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' [ 1%] Generating config-features.hpp, config-features.cpp cd /builddir/build/BUILD/espresso/mpich/src/config && /usr/bin/python3 /builddir/build/BUILD/espresso/src/config/gen_featureconfig.py /builddir/build/BUILD/espresso/src/config/features.def /builddir/build/BUILD/espresso/mpich/src/config/config-features.hpp /builddir/build/BUILD/espresso/mpich/src/config/config-features.cpp Reading definitions from /builddir/build/BUILD/espresso/src/config/features.def... Done. Writing /builddir/build/BUILD/espresso/mpich/src/config/config-features.hpp... Done. Writing /builddir/build/BUILD/espresso/mpich/src/config/config-features.cpp... Done. make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 1%] Built target generate_config_features /usr/bin/make -f CMakeFiles/myconfig.dir/build.make CMakeFiles/myconfig.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/CMakeFiles/myconfig.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/espresso/mpich/CMakeFiles/myconfig.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/espresso/mpich/CMakeFiles/myconfig.dir/depend.internal". Dependee "/builddir/build/BUILD/espresso/mpich/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/espresso/mpich/CMakeFiles/myconfig.dir/depend.internal". Scanning dependencies of target myconfig make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' /usr/bin/make -f CMakeFiles/myconfig.dir/build.make CMakeFiles/myconfig.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' make[2]: Nothing to be done for 'CMakeFiles/myconfig.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 1%] Built target myconfig /usr/bin/make -f src/config/CMakeFiles/version.dir/build.make src/config/CMakeFiles/version.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/config /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/config /builddir/build/BUILD/espresso/mpich/src/config/CMakeFiles/version.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/espresso/mpich/src/config/CMakeFiles/version.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/espresso/mpich/src/config/CMakeFiles/version.dir/depend.internal". Dependee "/builddir/build/BUILD/espresso/mpich/src/config/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/espresso/mpich/src/config/CMakeFiles/version.dir/depend.internal". Scanning dependencies of target version make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' /usr/bin/make -f src/config/CMakeFiles/version.dir/build.make src/config/CMakeFiles/version.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich/src/config && /usr/bin/cmake -DPROJECT_SOURCE_DIR=/builddir/build/BUILD/espresso -DPROJECT_VERSION=4.1.2 -DGIT_EXECUTABLE=GIT_EXECUTABLE-NOTFOUND -P /builddir/build/BUILD/espresso/cmake/version.cmake make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 1%] Built target version /usr/bin/make -f src/config/CMakeFiles/check_myconfig.dir/build.make src/config/CMakeFiles/check_myconfig.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/config /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/config /builddir/build/BUILD/espresso/mpich/src/config/CMakeFiles/check_myconfig.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/espresso/mpich/src/config/CMakeFiles/check_myconfig.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/espresso/mpich/src/config/CMakeFiles/check_myconfig.dir/depend.internal". Dependee "/builddir/build/BUILD/espresso/mpich/src/config/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/espresso/mpich/src/config/CMakeFiles/check_myconfig.dir/depend.internal". Scanning dependencies of target check_myconfig make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' /usr/bin/make -f src/config/CMakeFiles/check_myconfig.dir/build.make src/config/CMakeFiles/check_myconfig.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich/src/config && /usr/bin/python3 /builddir/build/BUILD/espresso/src/config/check_myconfig.py /usr/bin/g++ /builddir/build/BUILD/espresso/src/config/features.def /builddir/build/BUILD/espresso/mpich/src/config/myconfig-final.hpp cmake_config.hpp make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 1%] Built target check_myconfig /usr/bin/make -f src/config/CMakeFiles/EspressoConfig.dir/build.make src/config/CMakeFiles/EspressoConfig.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/config /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/config /builddir/build/BUILD/espresso/mpich/src/config/CMakeFiles/EspressoConfig.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/espresso/mpich/src/config/CMakeFiles/EspressoConfig.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/espresso/mpich/src/config/CMakeFiles/EspressoConfig.dir/depend.internal". Dependee "/builddir/build/BUILD/espresso/mpich/src/config/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/espresso/mpich/src/config/CMakeFiles/EspressoConfig.dir/depend.internal". Scanning dependencies of target EspressoConfig make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' /usr/bin/make -f src/config/CMakeFiles/EspressoConfig.dir/build.make src/config/CMakeFiles/EspressoConfig.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' [ 1%] Building CXX object src/config/CMakeFiles/EspressoConfig.dir/config-features.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/config && /usr/bin/g++ -DEspressoConfig_EXPORTS -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -std=c++14 -o CMakeFiles/EspressoConfig.dir/config-features.cpp.o -c /builddir/build/BUILD/espresso/mpich/src/config/config-features.cpp [ 1%] Linking CXX shared library EspressoConfig.so cd /builddir/build/BUILD/espresso/mpich/src/config && /usr/bin/cmake -E cmake_link_script CMakeFiles/EspressoConfig.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -Wl,-rpath,/usr/lib64/python3.9/site-packages/mpich/espressomd -shared -Wl,-soname,EspressoConfig.so -o EspressoConfig.so CMakeFiles/EspressoConfig.dir/config-features.cpp.o make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 1%] Built target EspressoConfig /usr/bin/make -f src/core/CMakeFiles/EspressoCore.dir/build.make src/core/CMakeFiles/EspressoCore.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/core /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/core /builddir/build/BUILD/espresso/mpich/src/core/CMakeFiles/EspressoCore.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/espresso/mpich/src/core/CMakeFiles/EspressoCore.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/espresso/mpich/src/core/CMakeFiles/EspressoCore.dir/depend.internal". Dependee "/builddir/build/BUILD/espresso/mpich/src/core/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/espresso/mpich/src/core/CMakeFiles/EspressoCore.dir/depend.internal". Scanning dependencies of target EspressoCore make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' /usr/bin/make -f src/core/CMakeFiles/EspressoCore.dir/build.make src/core/CMakeFiles/EspressoCore.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' [ 3%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/accumulators.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/EspressoCore.dir/accumulators.cpp.o -c /builddir/build/BUILD/espresso/src/core/accumulators.cpp [ 3%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/cells.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/EspressoCore.dir/cells.cpp.o -c /builddir/build/BUILD/espresso/src/core/cells.cpp [ 3%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/collision.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/EspressoCore.dir/collision.cpp.o -c /builddir/build/BUILD/espresso/src/core/collision.cpp [ 3%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/comfixed_global.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/EspressoCore.dir/comfixed_global.cpp.o -c /builddir/build/BUILD/espresso/src/core/comfixed_global.cpp [ 3%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/communication.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/EspressoCore.dir/communication.cpp.o -c /builddir/build/BUILD/espresso/src/core/communication.cpp [ 4%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/constraints.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/EspressoCore.dir/constraints.cpp.o -c /builddir/build/BUILD/espresso/src/core/constraints.cpp [ 4%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/debug.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/EspressoCore.dir/debug.cpp.o -c /builddir/build/BUILD/espresso/src/core/debug.cpp [ 4%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/diamond.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/EspressoCore.dir/diamond.cpp.o -c /builddir/build/BUILD/espresso/src/core/diamond.cpp [ 4%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/domain_decomposition.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/EspressoCore.dir/domain_decomposition.cpp.o -c /builddir/build/BUILD/espresso/src/core/domain_decomposition.cpp [ 4%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/dpd.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/EspressoCore.dir/dpd.cpp.o -c /builddir/build/BUILD/espresso/src/core/dpd.cpp [ 6%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/energy.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/EspressoCore.dir/energy.cpp.o -c /builddir/build/BUILD/espresso/src/core/energy.cpp [ 6%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/errorhandling.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/EspressoCore.dir/errorhandling.cpp.o -c /builddir/build/BUILD/espresso/src/core/errorhandling.cpp [ 6%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/EspressoSystemInterface.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/EspressoCore.dir/EspressoSystemInterface.cpp.o -c /builddir/build/BUILD/espresso/src/core/EspressoSystemInterface.cpp [ 6%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/forcecap.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/EspressoCore.dir/forcecap.cpp.o -c /builddir/build/BUILD/espresso/src/core/forcecap.cpp [ 6%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/forces.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/EspressoCore.dir/forces.cpp.o -c /builddir/build/BUILD/espresso/src/core/forces.cpp [ 7%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/galilei.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/EspressoCore.dir/galilei.cpp.o -c /builddir/build/BUILD/espresso/src/core/galilei.cpp [ 7%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/ghosts.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/EspressoCore.dir/ghosts.cpp.o -c /builddir/build/BUILD/espresso/src/core/ghosts.cpp [ 7%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/global.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/EspressoCore.dir/global.cpp.o -c /builddir/build/BUILD/espresso/src/core/global.cpp [ 7%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/grid.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/EspressoCore.dir/grid.cpp.o -c /builddir/build/BUILD/espresso/src/core/grid.cpp [ 7%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/immersed_boundaries.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/EspressoCore.dir/immersed_boundaries.cpp.o -c /builddir/build/BUILD/espresso/src/core/immersed_boundaries.cpp [ 9%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/event.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/EspressoCore.dir/event.cpp.o -c /builddir/build/BUILD/espresso/src/core/event.cpp [ 9%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/integrate.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/EspressoCore.dir/integrate.cpp.o -c /builddir/build/BUILD/espresso/src/core/integrate.cpp [ 9%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/integrators/velocity_verlet_npt.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/EspressoCore.dir/integrators/velocity_verlet_npt.cpp.o -c /builddir/build/BUILD/espresso/src/core/integrators/velocity_verlet_npt.cpp [ 9%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/layered.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/EspressoCore.dir/layered.cpp.o -c /builddir/build/BUILD/espresso/src/core/layered.cpp [ 9%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/metadynamics.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/EspressoCore.dir/metadynamics.cpp.o -c /builddir/build/BUILD/espresso/src/core/metadynamics.cpp [ 10%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/integrators/steepest_descent.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/EspressoCore.dir/integrators/steepest_descent.cpp.o -c /builddir/build/BUILD/espresso/src/core/integrators/steepest_descent.cpp [ 10%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/npt.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/EspressoCore.dir/npt.cpp.o -c /builddir/build/BUILD/espresso/src/core/npt.cpp [ 10%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/nsquare.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/EspressoCore.dir/nsquare.cpp.o -c /builddir/build/BUILD/espresso/src/core/nsquare.cpp [ 10%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/partCfg_global.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/EspressoCore.dir/partCfg_global.cpp.o -c /builddir/build/BUILD/espresso/src/core/partCfg_global.cpp [ 12%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/particle_data.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/EspressoCore.dir/particle_data.cpp.o -c /builddir/build/BUILD/espresso/src/core/particle_data.cpp [ 12%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/polymer.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/EspressoCore.dir/polymer.cpp.o -c /builddir/build/BUILD/espresso/src/core/polymer.cpp [ 12%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/polynom.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/EspressoCore.dir/polynom.cpp.o -c /builddir/build/BUILD/espresso/src/core/polynom.cpp [ 12%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/pressure.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/EspressoCore.dir/pressure.cpp.o -c /builddir/build/BUILD/espresso/src/core/pressure.cpp [ 12%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/random.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/EspressoCore.dir/random.cpp.o -c /builddir/build/BUILD/espresso/src/core/random.cpp [ 14%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/rattle.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/EspressoCore.dir/rattle.cpp.o -c /builddir/build/BUILD/espresso/src/core/rattle.cpp [ 14%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/reaction_ensemble.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/EspressoCore.dir/reaction_ensemble.cpp.o -c /builddir/build/BUILD/espresso/src/core/reaction_ensemble.cpp [ 14%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/rotate_system.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/EspressoCore.dir/rotate_system.cpp.o -c /builddir/build/BUILD/espresso/src/core/rotate_system.cpp [ 14%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/rotation.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/EspressoCore.dir/rotation.cpp.o -c /builddir/build/BUILD/espresso/src/core/rotation.cpp [ 14%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/RuntimeErrorCollector.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/EspressoCore.dir/RuntimeErrorCollector.cpp.o -c /builddir/build/BUILD/espresso/src/core/RuntimeErrorCollector.cpp [ 15%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/RuntimeError.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/EspressoCore.dir/RuntimeError.cpp.o -c /builddir/build/BUILD/espresso/src/core/RuntimeError.cpp [ 15%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/RuntimeErrorStream.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/EspressoCore.dir/RuntimeErrorStream.cpp.o -c /builddir/build/BUILD/espresso/src/core/RuntimeErrorStream.cpp [ 15%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/specfunc.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/EspressoCore.dir/specfunc.cpp.o -c /builddir/build/BUILD/espresso/src/core/specfunc.cpp [ 15%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/statistics_chain.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/EspressoCore.dir/statistics_chain.cpp.o -c /builddir/build/BUILD/espresso/src/core/statistics_chain.cpp [ 15%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/statistics.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/EspressoCore.dir/statistics.cpp.o -c /builddir/build/BUILD/espresso/src/core/statistics.cpp [ 17%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/SystemInterface.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/EspressoCore.dir/SystemInterface.cpp.o -c /builddir/build/BUILD/espresso/src/core/SystemInterface.cpp [ 17%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/thermostat.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/EspressoCore.dir/thermostat.cpp.o -c /builddir/build/BUILD/espresso/src/core/thermostat.cpp [ 17%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/tuning.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/EspressoCore.dir/tuning.cpp.o -c /builddir/build/BUILD/espresso/src/core/tuning.cpp [ 17%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/virtual_sites.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/EspressoCore.dir/virtual_sites.cpp.o -c /builddir/build/BUILD/espresso/src/core/virtual_sites.cpp [ 17%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/accumulators/Correlator.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/EspressoCore.dir/accumulators/Correlator.cpp.o -c /builddir/build/BUILD/espresso/src/core/accumulators/Correlator.cpp [ 18%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/accumulators/MeanVarianceCalculator.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/EspressoCore.dir/accumulators/MeanVarianceCalculator.cpp.o -c /builddir/build/BUILD/espresso/src/core/accumulators/MeanVarianceCalculator.cpp [ 18%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/actor/ActorList.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/EspressoCore.dir/actor/ActorList.cpp.o -c /builddir/build/BUILD/espresso/src/core/actor/ActorList.cpp [ 18%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/actor/DipolarBarnesHut.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/EspressoCore.dir/actor/DipolarBarnesHut.cpp.o -c /builddir/build/BUILD/espresso/src/core/actor/DipolarBarnesHut.cpp [ 18%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/actor/DipolarDirectSum.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/EspressoCore.dir/actor/DipolarDirectSum.cpp.o -c /builddir/build/BUILD/espresso/src/core/actor/DipolarDirectSum.cpp [ 18%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/actor/Mmm1dgpuForce.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/EspressoCore.dir/actor/Mmm1dgpuForce.cpp.o -c /builddir/build/BUILD/espresso/src/core/actor/Mmm1dgpuForce.cpp [ 20%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/bonded_interactions/angle_cosine.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/EspressoCore.dir/bonded_interactions/angle_cosine.cpp.o -c /builddir/build/BUILD/espresso/src/core/bonded_interactions/angle_cosine.cpp [ 20%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/bonded_interactions/angle_cossquare.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/EspressoCore.dir/bonded_interactions/angle_cossquare.cpp.o -c /builddir/build/BUILD/espresso/src/core/bonded_interactions/angle_cossquare.cpp [ 20%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/bonded_interactions/angle_harmonic.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/EspressoCore.dir/bonded_interactions/angle_harmonic.cpp.o -c /builddir/build/BUILD/espresso/src/core/bonded_interactions/angle_harmonic.cpp [ 20%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/bonded_interactions/bonded_coulomb.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/EspressoCore.dir/bonded_interactions/bonded_coulomb.cpp.o -c /builddir/build/BUILD/espresso/src/core/bonded_interactions/bonded_coulomb.cpp [ 20%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/bonded_interactions/bonded_coulomb_sr.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/EspressoCore.dir/bonded_interactions/bonded_coulomb_sr.cpp.o -c /builddir/build/BUILD/espresso/src/core/bonded_interactions/bonded_coulomb_sr.cpp [ 21%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/bonded_interactions/bonded_interaction_data.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/EspressoCore.dir/bonded_interactions/bonded_interaction_data.cpp.o -c /builddir/build/BUILD/espresso/src/core/bonded_interactions/bonded_interaction_data.cpp [ 21%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/bonded_interactions/bonded_tab.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/EspressoCore.dir/bonded_interactions/bonded_tab.cpp.o -c /builddir/build/BUILD/espresso/src/core/bonded_interactions/bonded_tab.cpp [ 21%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/bonded_interactions/dihedral.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/EspressoCore.dir/bonded_interactions/dihedral.cpp.o -c /builddir/build/BUILD/espresso/src/core/bonded_interactions/dihedral.cpp [ 21%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/bonded_interactions/fene.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/EspressoCore.dir/bonded_interactions/fene.cpp.o -c /builddir/build/BUILD/espresso/src/core/bonded_interactions/fene.cpp [ 21%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/bonded_interactions/harmonic.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/EspressoCore.dir/bonded_interactions/harmonic.cpp.o -c /builddir/build/BUILD/espresso/src/core/bonded_interactions/harmonic.cpp [ 23%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/bonded_interactions/harmonic_dumbbell.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/EspressoCore.dir/bonded_interactions/harmonic_dumbbell.cpp.o -c /builddir/build/BUILD/espresso/src/core/bonded_interactions/harmonic_dumbbell.cpp [ 23%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/bonded_interactions/quartic.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/EspressoCore.dir/bonded_interactions/quartic.cpp.o -c /builddir/build/BUILD/espresso/src/core/bonded_interactions/quartic.cpp [ 23%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/bonded_interactions/subt_lj.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/EspressoCore.dir/bonded_interactions/subt_lj.cpp.o -c /builddir/build/BUILD/espresso/src/core/bonded_interactions/subt_lj.cpp [ 23%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/bonded_interactions/thermalized_bond.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/EspressoCore.dir/bonded_interactions/thermalized_bond.cpp.o -c /builddir/build/BUILD/espresso/src/core/bonded_interactions/thermalized_bond.cpp [ 23%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/bonded_interactions/umbrella.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/EspressoCore.dir/bonded_interactions/umbrella.cpp.o -c /builddir/build/BUILD/espresso/src/core/bonded_interactions/umbrella.cpp [ 25%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/constraints/HomogeneousMagneticField.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/EspressoCore.dir/constraints/HomogeneousMagneticField.cpp.o -c /builddir/build/BUILD/espresso/src/core/constraints/HomogeneousMagneticField.cpp [ 25%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/constraints/ShapeBasedConstraint.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/EspressoCore.dir/constraints/ShapeBasedConstraint.cpp.o -c /builddir/build/BUILD/espresso/src/core/constraints/ShapeBasedConstraint.cpp [ 25%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/electrostatics_magnetostatics/debye_hueckel.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/EspressoCore.dir/electrostatics_magnetostatics/debye_hueckel.cpp.o -c /builddir/build/BUILD/espresso/src/core/electrostatics_magnetostatics/debye_hueckel.cpp [ 25%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/electrostatics_magnetostatics/elc.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/EspressoCore.dir/electrostatics_magnetostatics/elc.cpp.o -c /builddir/build/BUILD/espresso/src/core/electrostatics_magnetostatics/elc.cpp [ 26%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/electrostatics_magnetostatics/icc.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/EspressoCore.dir/electrostatics_magnetostatics/icc.cpp.o -c /builddir/build/BUILD/espresso/src/core/electrostatics_magnetostatics/icc.cpp [ 26%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/electrostatics_magnetostatics/magnetic_non_p3m_methods.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/EspressoCore.dir/electrostatics_magnetostatics/magnetic_non_p3m_methods.cpp.o -c /builddir/build/BUILD/espresso/src/core/electrostatics_magnetostatics/magnetic_non_p3m_methods.cpp [ 26%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/electrostatics_magnetostatics/mdlc_correction.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/EspressoCore.dir/electrostatics_magnetostatics/mdlc_correction.cpp.o -c /builddir/build/BUILD/espresso/src/core/electrostatics_magnetostatics/mdlc_correction.cpp [ 26%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/electrostatics_magnetostatics/mmm1d.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/EspressoCore.dir/electrostatics_magnetostatics/mmm1d.cpp.o -c /builddir/build/BUILD/espresso/src/core/electrostatics_magnetostatics/mmm1d.cpp [ 26%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/electrostatics_magnetostatics/mmm2d.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/EspressoCore.dir/electrostatics_magnetostatics/mmm2d.cpp.o -c /builddir/build/BUILD/espresso/src/core/electrostatics_magnetostatics/mmm2d.cpp [ 28%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/electrostatics_magnetostatics/mmm-common.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/EspressoCore.dir/electrostatics_magnetostatics/mmm-common.cpp.o -c /builddir/build/BUILD/espresso/src/core/electrostatics_magnetostatics/mmm-common.cpp [ 28%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/electrostatics_magnetostatics/p3m-common.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/EspressoCore.dir/electrostatics_magnetostatics/p3m-common.cpp.o -c /builddir/build/BUILD/espresso/src/core/electrostatics_magnetostatics/p3m-common.cpp [ 28%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/electrostatics_magnetostatics/p3m.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/EspressoCore.dir/electrostatics_magnetostatics/p3m.cpp.o -c /builddir/build/BUILD/espresso/src/core/electrostatics_magnetostatics/p3m.cpp [ 28%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/electrostatics_magnetostatics/p3m-dipolar.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables 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-Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/EspressoCore.dir/electrostatics_magnetostatics/p3m_gpu.cpp.o -c /builddir/build/BUILD/espresso/src/core/electrostatics_magnetostatics/p3m_gpu.cpp [ 29%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/electrostatics_magnetostatics/scafacos.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/EspressoCore.dir/electrostatics_magnetostatics/scafacos.cpp.o -c /builddir/build/BUILD/espresso/src/core/electrostatics_magnetostatics/scafacos.cpp [ 29%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/electrostatics_magnetostatics/fft.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/EspressoCore.dir/electrostatics_magnetostatics/fft.cpp.o -c /builddir/build/BUILD/espresso/src/core/electrostatics_magnetostatics/fft.cpp [ 29%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/electrostatics_magnetostatics/coulomb.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/EspressoCore.dir/electrostatics_magnetostatics/coulomb.cpp.o -c /builddir/build/BUILD/espresso/src/core/electrostatics_magnetostatics/coulomb.cpp [ 29%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/electrostatics_magnetostatics/dipole.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/EspressoCore.dir/electrostatics_magnetostatics/dipole.cpp.o -c /builddir/build/BUILD/espresso/src/core/electrostatics_magnetostatics/dipole.cpp [ 29%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/electrostatics_magnetostatics/reaction_field.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/EspressoCore.dir/electrostatics_magnetostatics/reaction_field.cpp.o -c /builddir/build/BUILD/espresso/src/core/electrostatics_magnetostatics/reaction_field.cpp [ 31%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/grid_based_algorithms/halo.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/EspressoCore.dir/grid_based_algorithms/halo.cpp.o -c /builddir/build/BUILD/espresso/src/core/grid_based_algorithms/halo.cpp [ 31%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/grid_based_algorithms/lattice.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/EspressoCore.dir/grid_based_algorithms/lattice.cpp.o -c /builddir/build/BUILD/espresso/src/core/grid_based_algorithms/lattice.cpp [ 31%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/grid_based_algorithms/lb_boundaries.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/EspressoCore.dir/grid_based_algorithms/lb_boundaries.cpp.o -c /builddir/build/BUILD/espresso/src/core/grid_based_algorithms/lb_boundaries.cpp [ 31%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/grid_based_algorithms/lb_collective_interface.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/EspressoCore.dir/grid_based_algorithms/lb_collective_interface.cpp.o -c /builddir/build/BUILD/espresso/src/core/grid_based_algorithms/lb_collective_interface.cpp [ 31%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/grid_based_algorithms/lb.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/EspressoCore.dir/grid_based_algorithms/lb.cpp.o -c /builddir/build/BUILD/espresso/src/core/grid_based_algorithms/lb.cpp [ 32%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/grid_based_algorithms/lb_interface.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/EspressoCore.dir/grid_based_algorithms/lb_interface.cpp.o -c /builddir/build/BUILD/espresso/src/core/grid_based_algorithms/lb_interface.cpp [ 32%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/grid_based_algorithms/lb_interpolation.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/EspressoCore.dir/grid_based_algorithms/lb_interpolation.cpp.o -c /builddir/build/BUILD/espresso/src/core/grid_based_algorithms/lb_interpolation.cpp [ 32%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/grid_based_algorithms/lb_particle_coupling.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC 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-Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/EspressoCore.dir/immersed_boundary/ibm_tribend.cpp.o -c /builddir/build/BUILD/espresso/src/core/immersed_boundary/ibm_tribend.cpp [ 32%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/immersed_boundary/ibm_triel.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables 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-Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/EspressoCore.dir/immersed_boundary/ImmersedBoundaries.cpp.o -c /builddir/build/BUILD/espresso/src/core/immersed_boundary/ImmersedBoundaries.cpp [ 34%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/nonbonded_interactions/bmhtf-nacl.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/EspressoCore.dir/nonbonded_interactions/bmhtf-nacl.cpp.o -c /builddir/build/BUILD/espresso/src/core/nonbonded_interactions/bmhtf-nacl.cpp [ 34%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/nonbonded_interactions/buckingham.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/EspressoCore.dir/nonbonded_interactions/buckingham.cpp.o -c /builddir/build/BUILD/espresso/src/core/nonbonded_interactions/buckingham.cpp [ 34%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/nonbonded_interactions/gaussian.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/EspressoCore.dir/nonbonded_interactions/gaussian.cpp.o -c /builddir/build/BUILD/espresso/src/core/nonbonded_interactions/gaussian.cpp [ 34%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/nonbonded_interactions/gay_berne.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/EspressoCore.dir/nonbonded_interactions/gay_berne.cpp.o -c /builddir/build/BUILD/espresso/src/core/nonbonded_interactions/gay_berne.cpp [ 35%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/nonbonded_interactions/hat.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/EspressoCore.dir/nonbonded_interactions/hat.cpp.o -c /builddir/build/BUILD/espresso/src/core/nonbonded_interactions/hat.cpp [ 35%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/nonbonded_interactions/hertzian.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/EspressoCore.dir/nonbonded_interactions/hertzian.cpp.o -c /builddir/build/BUILD/espresso/src/core/nonbonded_interactions/hertzian.cpp [ 35%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/nonbonded_interactions/ljcos2.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/EspressoCore.dir/nonbonded_interactions/ljcos2.cpp.o -c /builddir/build/BUILD/espresso/src/core/nonbonded_interactions/ljcos2.cpp [ 35%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/nonbonded_interactions/ljcos.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/EspressoCore.dir/nonbonded_interactions/ljcos.cpp.o -c /builddir/build/BUILD/espresso/src/core/nonbonded_interactions/ljcos.cpp [ 35%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/nonbonded_interactions/lj.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/EspressoCore.dir/nonbonded_interactions/lj.cpp.o -c /builddir/build/BUILD/espresso/src/core/nonbonded_interactions/lj.cpp [ 37%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/nonbonded_interactions/ljgen.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/EspressoCore.dir/nonbonded_interactions/ljgen.cpp.o -c /builddir/build/BUILD/espresso/src/core/nonbonded_interactions/ljgen.cpp [ 37%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/nonbonded_interactions/morse.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/EspressoCore.dir/nonbonded_interactions/morse.cpp.o -c /builddir/build/BUILD/espresso/src/core/nonbonded_interactions/morse.cpp [ 37%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/nonbonded_interactions/nonbonded_interaction_data.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/EspressoCore.dir/nonbonded_interactions/nonbonded_interaction_data.cpp.o -c /builddir/build/BUILD/espresso/src/core/nonbonded_interactions/nonbonded_interaction_data.cpp [ 37%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/nonbonded_interactions/nonbonded_tab.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/EspressoCore.dir/nonbonded_interactions/nonbonded_tab.cpp.o -c /builddir/build/BUILD/espresso/src/core/nonbonded_interactions/nonbonded_tab.cpp [ 37%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/nonbonded_interactions/soft_sphere.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/EspressoCore.dir/nonbonded_interactions/soft_sphere.cpp.o -c /builddir/build/BUILD/espresso/src/core/nonbonded_interactions/soft_sphere.cpp [ 39%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/nonbonded_interactions/smooth_step.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/EspressoCore.dir/nonbonded_interactions/smooth_step.cpp.o -c /builddir/build/BUILD/espresso/src/core/nonbonded_interactions/smooth_step.cpp [ 39%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/nonbonded_interactions/thole.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/EspressoCore.dir/nonbonded_interactions/thole.cpp.o -c /builddir/build/BUILD/espresso/src/core/nonbonded_interactions/thole.cpp [ 39%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/nonbonded_interactions/wca.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/EspressoCore.dir/nonbonded_interactions/wca.cpp.o -c /builddir/build/BUILD/espresso/src/core/nonbonded_interactions/wca.cpp [ 39%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/object-in-fluid/affinity.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/EspressoCore.dir/object-in-fluid/affinity.cpp.o -c /builddir/build/BUILD/espresso/src/core/object-in-fluid/affinity.cpp [ 40%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/object-in-fluid/membrane_collision.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/EspressoCore.dir/object-in-fluid/membrane_collision.cpp.o -c /builddir/build/BUILD/espresso/src/core/object-in-fluid/membrane_collision.cpp [ 40%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/object-in-fluid/oif_global_forces.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/EspressoCore.dir/object-in-fluid/oif_global_forces.cpp.o -c /builddir/build/BUILD/espresso/src/core/object-in-fluid/oif_global_forces.cpp [ 40%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/object-in-fluid/oif_local_forces.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/EspressoCore.dir/object-in-fluid/oif_local_forces.cpp.o -c /builddir/build/BUILD/espresso/src/core/object-in-fluid/oif_local_forces.cpp [ 40%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/object-in-fluid/out_direction.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/EspressoCore.dir/object-in-fluid/out_direction.cpp.o -c /builddir/build/BUILD/espresso/src/core/object-in-fluid/out_direction.cpp [ 40%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/observables/CylindricalLBFluxDensityProfileAtParticlePositions.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/EspressoCore.dir/observables/CylindricalLBFluxDensityProfileAtParticlePositions.cpp.o -c /builddir/build/BUILD/espresso/src/core/observables/CylindricalLBFluxDensityProfileAtParticlePositions.cpp [ 42%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/observables/CylindricalLBVelocityProfileAtParticlePositions.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/EspressoCore.dir/observables/CylindricalLBVelocityProfileAtParticlePositions.cpp.o -c /builddir/build/BUILD/espresso/src/core/observables/CylindricalLBVelocityProfileAtParticlePositions.cpp [ 42%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/observables/CylindricalLBVelocityProfile.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/EspressoCore.dir/observables/CylindricalLBVelocityProfile.cpp.o -c /builddir/build/BUILD/espresso/src/core/observables/CylindricalLBVelocityProfile.cpp [ 42%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/observables/LBVelocityProfile.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/EspressoCore.dir/observables/LBVelocityProfile.cpp.o -c /builddir/build/BUILD/espresso/src/core/observables/LBVelocityProfile.cpp [ 42%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/virtual_sites/lb_inertialess_tracers.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/EspressoCore.dir/virtual_sites/lb_inertialess_tracers.cpp.o -c /builddir/build/BUILD/espresso/src/core/virtual_sites/lb_inertialess_tracers.cpp [ 42%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/virtual_sites/lb_inertialess_tracers_cuda_interface.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/EspressoCore.dir/virtual_sites/lb_inertialess_tracers_cuda_interface.cpp.o -c /builddir/build/BUILD/espresso/src/core/virtual_sites/lb_inertialess_tracers_cuda_interface.cpp [ 43%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/virtual_sites/virtual_sites_com.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/EspressoCore.dir/virtual_sites/virtual_sites_com.cpp.o -c /builddir/build/BUILD/espresso/src/core/virtual_sites/virtual_sites_com.cpp [ 43%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/virtual_sites/VirtualSitesInertialessTracers.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/EspressoCore.dir/virtual_sites/VirtualSitesInertialessTracers.cpp.o -c /builddir/build/BUILD/espresso/src/core/virtual_sites/VirtualSitesInertialessTracers.cpp [ 43%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/virtual_sites/VirtualSitesRelative.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/EspressoCore.dir/virtual_sites/VirtualSitesRelative.cpp.o -c /builddir/build/BUILD/espresso/src/core/virtual_sites/VirtualSitesRelative.cpp [ 43%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/accumulators/TimeSeries.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/EspressoCore.dir/accumulators/TimeSeries.cpp.o -c /builddir/build/BUILD/espresso/src/core/accumulators/TimeSeries.cpp [ 43%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/observables/PidObservable.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/EspressoCore.dir/observables/PidObservable.cpp.o -c /builddir/build/BUILD/espresso/src/core/observables/PidObservable.cpp [ 45%] Linking CXX shared library EspressoCore.so cd /builddir/build/BUILD/espresso/mpich/src/core && /usr/bin/cmake -E cmake_link_script CMakeFiles/EspressoCore.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -Wl,--as-needed -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,-rpath,/usr/lib64/python3.9/site-packages/mpich/espressomd -shared -Wl,-soname,EspressoCore.so -o EspressoCore.so CMakeFiles/EspressoCore.dir/accumulators.cpp.o CMakeFiles/EspressoCore.dir/cells.cpp.o CMakeFiles/EspressoCore.dir/collision.cpp.o CMakeFiles/EspressoCore.dir/comfixed_global.cpp.o CMakeFiles/EspressoCore.dir/communication.cpp.o CMakeFiles/EspressoCore.dir/constraints.cpp.o CMakeFiles/EspressoCore.dir/debug.cpp.o CMakeFiles/EspressoCore.dir/diamond.cpp.o CMakeFiles/EspressoCore.dir/domain_decomposition.cpp.o CMakeFiles/EspressoCore.dir/dpd.cpp.o CMakeFiles/EspressoCore.dir/energy.cpp.o CMakeFiles/EspressoCore.dir/errorhandling.cpp.o CMakeFiles/EspressoCore.dir/EspressoSystemInterface.cpp.o 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CMakeFiles/EspressoCore.dir/reaction_ensemble.cpp.o CMakeFiles/EspressoCore.dir/rotate_system.cpp.o CMakeFiles/EspressoCore.dir/rotation.cpp.o CMakeFiles/EspressoCore.dir/RuntimeErrorCollector.cpp.o CMakeFiles/EspressoCore.dir/RuntimeError.cpp.o CMakeFiles/EspressoCore.dir/RuntimeErrorStream.cpp.o CMakeFiles/EspressoCore.dir/specfunc.cpp.o CMakeFiles/EspressoCore.dir/statistics_chain.cpp.o CMakeFiles/EspressoCore.dir/statistics.cpp.o CMakeFiles/EspressoCore.dir/SystemInterface.cpp.o CMakeFiles/EspressoCore.dir/thermostat.cpp.o CMakeFiles/EspressoCore.dir/tuning.cpp.o CMakeFiles/EspressoCore.dir/virtual_sites.cpp.o CMakeFiles/EspressoCore.dir/accumulators/Correlator.cpp.o CMakeFiles/EspressoCore.dir/accumulators/MeanVarianceCalculator.cpp.o CMakeFiles/EspressoCore.dir/actor/ActorList.cpp.o CMakeFiles/EspressoCore.dir/actor/DipolarBarnesHut.cpp.o CMakeFiles/EspressoCore.dir/actor/DipolarDirectSum.cpp.o CMakeFiles/EspressoCore.dir/actor/Mmm1dgpuForce.cpp.o CMakeFiles/EspressoCore.dir/bonded_interactions/angle_cosine.cpp.o CMakeFiles/EspressoCore.dir/bonded_interactions/angle_cossquare.cpp.o CMakeFiles/EspressoCore.dir/bonded_interactions/angle_harmonic.cpp.o CMakeFiles/EspressoCore.dir/bonded_interactions/bonded_coulomb.cpp.o CMakeFiles/EspressoCore.dir/bonded_interactions/bonded_coulomb_sr.cpp.o CMakeFiles/EspressoCore.dir/bonded_interactions/bonded_interaction_data.cpp.o CMakeFiles/EspressoCore.dir/bonded_interactions/bonded_tab.cpp.o CMakeFiles/EspressoCore.dir/bonded_interactions/dihedral.cpp.o CMakeFiles/EspressoCore.dir/bonded_interactions/fene.cpp.o CMakeFiles/EspressoCore.dir/bonded_interactions/harmonic.cpp.o CMakeFiles/EspressoCore.dir/bonded_interactions/harmonic_dumbbell.cpp.o CMakeFiles/EspressoCore.dir/bonded_interactions/quartic.cpp.o CMakeFiles/EspressoCore.dir/bonded_interactions/subt_lj.cpp.o CMakeFiles/EspressoCore.dir/bonded_interactions/thermalized_bond.cpp.o 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CMakeFiles/EspressoCore.dir/electrostatics_magnetostatics/p3m-dipolar.cpp.o CMakeFiles/EspressoCore.dir/electrostatics_magnetostatics/p3m_gpu.cpp.o CMakeFiles/EspressoCore.dir/electrostatics_magnetostatics/scafacos.cpp.o CMakeFiles/EspressoCore.dir/electrostatics_magnetostatics/fft.cpp.o CMakeFiles/EspressoCore.dir/electrostatics_magnetostatics/coulomb.cpp.o CMakeFiles/EspressoCore.dir/electrostatics_magnetostatics/dipole.cpp.o CMakeFiles/EspressoCore.dir/electrostatics_magnetostatics/reaction_field.cpp.o CMakeFiles/EspressoCore.dir/grid_based_algorithms/halo.cpp.o CMakeFiles/EspressoCore.dir/grid_based_algorithms/lattice.cpp.o CMakeFiles/EspressoCore.dir/grid_based_algorithms/lb_boundaries.cpp.o CMakeFiles/EspressoCore.dir/grid_based_algorithms/lb_collective_interface.cpp.o CMakeFiles/EspressoCore.dir/grid_based_algorithms/lb.cpp.o CMakeFiles/EspressoCore.dir/grid_based_algorithms/lb_interface.cpp.o CMakeFiles/EspressoCore.dir/grid_based_algorithms/lb_interpolation.cpp.o CMakeFiles/EspressoCore.dir/grid_based_algorithms/lb_particle_coupling.cpp.o CMakeFiles/EspressoCore.dir/immersed_boundary/ibm_tribend.cpp.o CMakeFiles/EspressoCore.dir/immersed_boundary/ibm_triel.cpp.o CMakeFiles/EspressoCore.dir/immersed_boundary/ImmersedBoundaries.cpp.o CMakeFiles/EspressoCore.dir/nonbonded_interactions/bmhtf-nacl.cpp.o CMakeFiles/EspressoCore.dir/nonbonded_interactions/buckingham.cpp.o CMakeFiles/EspressoCore.dir/nonbonded_interactions/gaussian.cpp.o CMakeFiles/EspressoCore.dir/nonbonded_interactions/gay_berne.cpp.o CMakeFiles/EspressoCore.dir/nonbonded_interactions/hat.cpp.o CMakeFiles/EspressoCore.dir/nonbonded_interactions/hertzian.cpp.o CMakeFiles/EspressoCore.dir/nonbonded_interactions/ljcos2.cpp.o CMakeFiles/EspressoCore.dir/nonbonded_interactions/ljcos.cpp.o CMakeFiles/EspressoCore.dir/nonbonded_interactions/lj.cpp.o CMakeFiles/EspressoCore.dir/nonbonded_interactions/ljgen.cpp.o CMakeFiles/EspressoCore.dir/nonbonded_interactions/morse.cpp.o CMakeFiles/EspressoCore.dir/nonbonded_interactions/nonbonded_interaction_data.cpp.o CMakeFiles/EspressoCore.dir/nonbonded_interactions/nonbonded_tab.cpp.o CMakeFiles/EspressoCore.dir/nonbonded_interactions/soft_sphere.cpp.o CMakeFiles/EspressoCore.dir/nonbonded_interactions/smooth_step.cpp.o CMakeFiles/EspressoCore.dir/nonbonded_interactions/thole.cpp.o CMakeFiles/EspressoCore.dir/nonbonded_interactions/wca.cpp.o CMakeFiles/EspressoCore.dir/object-in-fluid/affinity.cpp.o CMakeFiles/EspressoCore.dir/object-in-fluid/membrane_collision.cpp.o CMakeFiles/EspressoCore.dir/object-in-fluid/oif_global_forces.cpp.o CMakeFiles/EspressoCore.dir/object-in-fluid/oif_local_forces.cpp.o CMakeFiles/EspressoCore.dir/object-in-fluid/out_direction.cpp.o CMakeFiles/EspressoCore.dir/observables/CylindricalLBFluxDensityProfileAtParticlePositions.cpp.o CMakeFiles/EspressoCore.dir/observables/CylindricalLBVelocityProfileAtParticlePositions.cpp.o CMakeFiles/EspressoCore.dir/observables/CylindricalLBVelocityProfile.cpp.o CMakeFiles/EspressoCore.dir/observables/LBVelocityProfile.cpp.o CMakeFiles/EspressoCore.dir/virtual_sites/lb_inertialess_tracers.cpp.o CMakeFiles/EspressoCore.dir/virtual_sites/lb_inertialess_tracers_cuda_interface.cpp.o CMakeFiles/EspressoCore.dir/virtual_sites/virtual_sites_com.cpp.o CMakeFiles/EspressoCore.dir/virtual_sites/VirtualSitesInertialessTracers.cpp.o CMakeFiles/EspressoCore.dir/virtual_sites/VirtualSitesRelative.cpp.o CMakeFiles/EspressoCore.dir/accumulators/TimeSeries.cpp.o CMakeFiles/EspressoCore.dir/observables/PidObservable.cpp.o ../config/EspressoConfig.so /usr/lib64/libboost_serialization.so /usr/lib64/mpich/lib/libboost_mpi.so ../pdbparser/pdbparser.so /usr/lib64/libfftw3.so /usr/lib64/libboost_serialization.so /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 45%] Built target EspressoCore /usr/bin/make -f src/core/io/writer/CMakeFiles/H5mdCore.dir/build.make src/core/io/writer/CMakeFiles/H5mdCore.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/core/io/writer /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/core/io/writer /builddir/build/BUILD/espresso/mpich/src/core/io/writer/CMakeFiles/H5mdCore.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/espresso/mpich/src/core/io/writer/CMakeFiles/H5mdCore.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/espresso/mpich/src/core/io/writer/CMakeFiles/H5mdCore.dir/depend.internal". Dependee "/builddir/build/BUILD/espresso/mpich/src/core/io/writer/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/espresso/mpich/src/core/io/writer/CMakeFiles/H5mdCore.dir/depend.internal". Scanning dependencies of target H5mdCore make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' /usr/bin/make -f src/core/io/writer/CMakeFiles/H5mdCore.dir/build.make src/core/io/writer/CMakeFiles/H5mdCore.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' [ 45%] Building CXX object src/core/io/writer/CMakeFiles/H5mdCore.dir/h5md_core.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/core/io/writer && /usr/bin/g++ -DH5XX_USE_MPI -DH5mdCore_EXPORTS -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src/core/io/writer/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/utils/include -isystem /builddir/build/BUILD/espresso/libs/h5xx -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/H5mdCore.dir/h5md_core.cpp.o -c /builddir/build/BUILD/espresso/src/core/io/writer/h5md_core.cpp [ 46%] Linking CXX shared library H5mdCore.so cd /builddir/build/BUILD/espresso/mpich/src/core/io/writer && /usr/bin/cmake -E cmake_link_script CMakeFiles/H5mdCore.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -Wl,--as-needed -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,-rpath,/usr/lib64/python3.9/site-packages/mpich/espressomd -shared -Wl,-soname,H5mdCore.so -o H5mdCore.so CMakeFiles/H5mdCore.dir/h5md_core.cpp.o ../../EspressoCore.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libboost_filesystem.so ../../../config/EspressoConfig.so /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so /usr/lib64/mpich/lib/libboost_mpi.so /usr/lib64/libboost_serialization.so -Wl,-rpath-link,/builddir/build/BUILD/espresso/mpich/src/pdbparser make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 46%] Built target H5mdCore /usr/bin/make -f src/core/io/reader/CMakeFiles/pdbreader.dir/build.make src/core/io/reader/CMakeFiles/pdbreader.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/core/io/reader /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/core/io/reader /builddir/build/BUILD/espresso/mpich/src/core/io/reader/CMakeFiles/pdbreader.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/espresso/mpich/src/core/io/reader/CMakeFiles/pdbreader.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/espresso/mpich/src/core/io/reader/CMakeFiles/pdbreader.dir/depend.internal". Dependee "/builddir/build/BUILD/espresso/mpich/src/core/io/reader/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/espresso/mpich/src/core/io/reader/CMakeFiles/pdbreader.dir/depend.internal". Scanning dependencies of target pdbreader make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' /usr/bin/make -f src/core/io/reader/CMakeFiles/pdbreader.dir/build.make src/core/io/reader/CMakeFiles/pdbreader.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' [ 46%] Building CXX object src/core/io/reader/CMakeFiles/pdbreader.dir/readpdb.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/core/io/reader && /usr/bin/g++ -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -Dpdbreader_EXPORTS -I/builddir/build/BUILD/espresso/src/core/io/reader -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/pdbreader.dir/readpdb.cpp.o -c /builddir/build/BUILD/espresso/src/core/io/reader/readpdb.cpp [ 46%] Linking CXX shared library pdbreader.so cd /builddir/build/BUILD/espresso/mpich/src/core/io/reader && /usr/bin/cmake -E cmake_link_script CMakeFiles/pdbreader.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -Wl,--as-needed -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,-rpath,/usr/lib64/python3.9/site-packages/mpich/espressomd -shared -Wl,-soname,pdbreader.so -o pdbreader.so CMakeFiles/pdbreader.dir/readpdb.cpp.o ../../EspressoCore.so ../../../pdbparser/pdbparser.so ../../../config/EspressoConfig.so /usr/lib64/mpich/lib/libboost_mpi.so /usr/lib64/libboost_serialization.so /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 46%] Built target pdbreader /usr/bin/make -f src/core/io/mpiio/CMakeFiles/mpiio.dir/build.make src/core/io/mpiio/CMakeFiles/mpiio.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/core/io/mpiio /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/core/io/mpiio /builddir/build/BUILD/espresso/mpich/src/core/io/mpiio/CMakeFiles/mpiio.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/espresso/mpich/src/core/io/mpiio/CMakeFiles/mpiio.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/espresso/mpich/src/core/io/mpiio/CMakeFiles/mpiio.dir/depend.internal". 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Scanning dependencies of target mpiio make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' /usr/bin/make -f src/core/io/mpiio/CMakeFiles/mpiio.dir/build.make src/core/io/mpiio/CMakeFiles/mpiio.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' [ 46%] Building CXX object src/core/io/mpiio/CMakeFiles/mpiio.dir/mpiio.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/core/io/mpiio && /usr/bin/g++ -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -Dmpiio_EXPORTS -I/builddir/build/BUILD/espresso/src/core/io/mpiio -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/utils/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/mpiio.dir/mpiio.cpp.o -c /builddir/build/BUILD/espresso/src/core/io/mpiio/mpiio.cpp [ 46%] Linking CXX shared library mpiio.so cd /builddir/build/BUILD/espresso/mpich/src/core/io/mpiio && /usr/bin/cmake -E cmake_link_script CMakeFiles/mpiio.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -Wl,--as-needed -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,-rpath,/usr/lib64/python3.9/site-packages/mpich/espressomd -shared -Wl,-soname,mpiio.so -o mpiio.so CMakeFiles/mpiio.dir/mpiio.cpp.o ../../EspressoCore.so ../../../config/EspressoConfig.so /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so /usr/lib64/mpich/lib/libboost_mpi.so /usr/lib64/libboost_serialization.so -Wl,-rpath-link,/builddir/build/BUILD/espresso/mpich/src/pdbparser make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 46%] Built target mpiio /usr/bin/make -f src/core/shapes/CMakeFiles/Shapes.dir/build.make src/core/shapes/CMakeFiles/Shapes.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/core/shapes /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/core/shapes /builddir/build/BUILD/espresso/mpich/src/core/shapes/CMakeFiles/Shapes.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/espresso/mpich/src/core/shapes/CMakeFiles/Shapes.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/espresso/mpich/src/core/shapes/CMakeFiles/Shapes.dir/depend.internal". 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Scanning dependencies of target Shapes make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' /usr/bin/make -f src/core/shapes/CMakeFiles/Shapes.dir/build.make src/core/shapes/CMakeFiles/Shapes.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' [ 48%] Building CXX object src/core/shapes/CMakeFiles/Shapes.dir/Cylinder.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/core/shapes && /usr/bin/g++ -DR123_USE_MULHILO64_C99 -DShapes_EXPORTS -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/utils/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/Shapes.dir/Cylinder.cpp.o -c /builddir/build/BUILD/espresso/src/core/shapes/Cylinder.cpp [ 48%] Building CXX object src/core/shapes/CMakeFiles/Shapes.dir/Ellipsoid.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/core/shapes && /usr/bin/g++ -DR123_USE_MULHILO64_C99 -DShapes_EXPORTS -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/utils/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/Shapes.dir/Ellipsoid.cpp.o -c /builddir/build/BUILD/espresso/src/core/shapes/Ellipsoid.cpp [ 48%] Building CXX object src/core/shapes/CMakeFiles/Shapes.dir/HollowCone.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/core/shapes && /usr/bin/g++ -DR123_USE_MULHILO64_C99 -DShapes_EXPORTS -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/utils/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/Shapes.dir/HollowCone.cpp.o -c /builddir/build/BUILD/espresso/src/core/shapes/HollowCone.cpp [ 48%] Building CXX object src/core/shapes/CMakeFiles/Shapes.dir/Rhomboid.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/core/shapes && /usr/bin/g++ -DR123_USE_MULHILO64_C99 -DShapes_EXPORTS -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/utils/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/Shapes.dir/Rhomboid.cpp.o -c /builddir/build/BUILD/espresso/src/core/shapes/Rhomboid.cpp [ 48%] Building CXX object src/core/shapes/CMakeFiles/Shapes.dir/SimplePore.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/core/shapes && /usr/bin/g++ -DR123_USE_MULHILO64_C99 -DShapes_EXPORTS -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/utils/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/Shapes.dir/SimplePore.cpp.o -c /builddir/build/BUILD/espresso/src/core/shapes/SimplePore.cpp [ 50%] Building CXX object src/core/shapes/CMakeFiles/Shapes.dir/Slitpore.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/core/shapes && /usr/bin/g++ -DR123_USE_MULHILO64_C99 -DShapes_EXPORTS -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/utils/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/Shapes.dir/Slitpore.cpp.o -c /builddir/build/BUILD/espresso/src/core/shapes/Slitpore.cpp [ 50%] Building CXX object src/core/shapes/CMakeFiles/Shapes.dir/Sphere.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/core/shapes && /usr/bin/g++ -DR123_USE_MULHILO64_C99 -DShapes_EXPORTS -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/utils/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/Shapes.dir/Sphere.cpp.o -c /builddir/build/BUILD/espresso/src/core/shapes/Sphere.cpp [ 50%] Building CXX object src/core/shapes/CMakeFiles/Shapes.dir/SpheroCylinder.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/core/shapes && /usr/bin/g++ -DR123_USE_MULHILO64_C99 -DShapes_EXPORTS -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/utils/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/Shapes.dir/SpheroCylinder.cpp.o -c /builddir/build/BUILD/espresso/src/core/shapes/SpheroCylinder.cpp [ 50%] Building CXX object src/core/shapes/CMakeFiles/Shapes.dir/Stomatocyte.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/core/shapes && /usr/bin/g++ -DR123_USE_MULHILO64_C99 -DShapes_EXPORTS -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/utils/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/Shapes.dir/Stomatocyte.cpp.o -c /builddir/build/BUILD/espresso/src/core/shapes/Stomatocyte.cpp [ 50%] Building CXX object src/core/shapes/CMakeFiles/Shapes.dir/Torus.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/core/shapes && /usr/bin/g++ -DR123_USE_MULHILO64_C99 -DShapes_EXPORTS -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/utils/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/Shapes.dir/Torus.cpp.o -c /builddir/build/BUILD/espresso/src/core/shapes/Torus.cpp [ 51%] Building CXX object src/core/shapes/CMakeFiles/Shapes.dir/Wall.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/core/shapes && /usr/bin/g++ -DR123_USE_MULHILO64_C99 -DShapes_EXPORTS -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/utils/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/Shapes.dir/Wall.cpp.o -c /builddir/build/BUILD/espresso/src/core/shapes/Wall.cpp [ 51%] Linking CXX shared library Shapes.so cd /builddir/build/BUILD/espresso/mpich/src/core/shapes && /usr/bin/cmake -E cmake_link_script CMakeFiles/Shapes.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -Wl,--as-needed -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,-rpath,/usr/lib64/python3.9/site-packages/mpich/espressomd -shared -Wl,-soname,Shapes.so -o Shapes.so CMakeFiles/Shapes.dir/Cylinder.cpp.o CMakeFiles/Shapes.dir/Ellipsoid.cpp.o CMakeFiles/Shapes.dir/HollowCone.cpp.o CMakeFiles/Shapes.dir/Rhomboid.cpp.o CMakeFiles/Shapes.dir/SimplePore.cpp.o CMakeFiles/Shapes.dir/Slitpore.cpp.o CMakeFiles/Shapes.dir/Sphere.cpp.o CMakeFiles/Shapes.dir/SpheroCylinder.cpp.o CMakeFiles/Shapes.dir/Stomatocyte.cpp.o CMakeFiles/Shapes.dir/Torus.cpp.o CMakeFiles/Shapes.dir/Wall.cpp.o ../EspressoCore.so ../../config/EspressoConfig.so /usr/lib64/mpich/lib/libboost_mpi.so /usr/lib64/libboost_serialization.so /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so -Wl,-rpath-link,/builddir/build/BUILD/espresso/mpich/src/pdbparser make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 51%] Built target Shapes /usr/bin/make -f src/core/cluster_analysis/CMakeFiles/core_cluster_analysis.dir/build.make src/core/cluster_analysis/CMakeFiles/core_cluster_analysis.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/core/cluster_analysis /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/core/cluster_analysis /builddir/build/BUILD/espresso/mpich/src/core/cluster_analysis/CMakeFiles/core_cluster_analysis.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/espresso/mpich/src/core/cluster_analysis/CMakeFiles/core_cluster_analysis.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/espresso/mpich/src/core/cluster_analysis/CMakeFiles/core_cluster_analysis.dir/depend.internal". Dependee "/builddir/build/BUILD/espresso/mpich/src/core/cluster_analysis/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/espresso/mpich/src/core/cluster_analysis/CMakeFiles/core_cluster_analysis.dir/depend.internal". Scanning dependencies of target core_cluster_analysis make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' /usr/bin/make -f src/core/cluster_analysis/CMakeFiles/core_cluster_analysis.dir/build.make src/core/cluster_analysis/CMakeFiles/core_cluster_analysis.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' [ 51%] Building CXX object src/core/cluster_analysis/CMakeFiles/core_cluster_analysis.dir/Cluster.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/core/cluster_analysis && /usr/bin/g++ -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -Dcore_cluster_analysis_EXPORTS -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/utils/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/core_cluster_analysis.dir/Cluster.cpp.o -c /builddir/build/BUILD/espresso/src/core/cluster_analysis/Cluster.cpp [ 51%] Building CXX object src/core/cluster_analysis/CMakeFiles/core_cluster_analysis.dir/ClusterStructure.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/core/cluster_analysis && /usr/bin/g++ -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -Dcore_cluster_analysis_EXPORTS -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/utils/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/core_cluster_analysis.dir/ClusterStructure.cpp.o -c /builddir/build/BUILD/espresso/src/core/cluster_analysis/ClusterStructure.cpp [ 53%] Linking CXX shared library core_cluster_analysis.so cd /builddir/build/BUILD/espresso/mpich/src/core/cluster_analysis && /usr/bin/cmake -E cmake_link_script CMakeFiles/core_cluster_analysis.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -Wl,--as-needed -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,-rpath,/usr/lib64/python3.9/site-packages/mpich/espressomd -shared -Wl,-soname,core_cluster_analysis.so -o core_cluster_analysis.so CMakeFiles/core_cluster_analysis.dir/Cluster.cpp.o CMakeFiles/core_cluster_analysis.dir/ClusterStructure.cpp.o ../EspressoCore.so ../../config/EspressoConfig.so /usr/lib64/libgsl.so /usr/lib64/libgslcblas.so /usr/lib64/mpich/lib/libboost_mpi.so /usr/lib64/libboost_serialization.so /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so -Wl,-rpath-link,/builddir/build/BUILD/espresso/mpich/src/pdbparser make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 53%] Built target core_cluster_analysis /usr/bin/make -f src/script_interface/CMakeFiles/EspressoScriptInterface.dir/build.make src/script_interface/CMakeFiles/EspressoScriptInterface.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/script_interface /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/script_interface /builddir/build/BUILD/espresso/mpich/src/script_interface/CMakeFiles/EspressoScriptInterface.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/espresso/mpich/src/script_interface/CMakeFiles/EspressoScriptInterface.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/espresso/mpich/src/script_interface/CMakeFiles/EspressoScriptInterface.dir/depend.internal". Dependee "/builddir/build/BUILD/espresso/mpich/src/script_interface/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/espresso/mpich/src/script_interface/CMakeFiles/EspressoScriptInterface.dir/depend.internal". Scanning dependencies of target EspressoScriptInterface make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' /usr/bin/make -f src/script_interface/CMakeFiles/EspressoScriptInterface.dir/build.make src/script_interface/CMakeFiles/EspressoScriptInterface.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' [ 53%] Building CXX object src/script_interface/CMakeFiles/EspressoScriptInterface.dir/accumulators/initialize.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/script_interface && /usr/bin/g++ -DEspressoScriptInterface_EXPORTS -DH5XX_USE_MPI -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src -I/builddir/build/BUILD/espresso/src/script_interface -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/core/io/mpiio -I/builddir/build/BUILD/espresso/src/core/io/reader -I/builddir/build/BUILD/espresso/src/pdbparser/include -I/builddir/build/BUILD/espresso/src/core/io/writer/SYSTEM -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -isystem /builddir/build/BUILD/espresso/libs/h5xx -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/EspressoScriptInterface.dir/accumulators/initialize.cpp.o -c /builddir/build/BUILD/espresso/src/script_interface/accumulators/initialize.cpp [ 53%] Building CXX object src/script_interface/CMakeFiles/EspressoScriptInterface.dir/initialize.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/script_interface && /usr/bin/g++ -DEspressoScriptInterface_EXPORTS -DH5XX_USE_MPI -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src -I/builddir/build/BUILD/espresso/src/script_interface -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/core/io/mpiio -I/builddir/build/BUILD/espresso/src/core/io/reader -I/builddir/build/BUILD/espresso/src/pdbparser/include -I/builddir/build/BUILD/espresso/src/core/io/writer/SYSTEM -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -isystem /builddir/build/BUILD/espresso/libs/h5xx -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/EspressoScriptInterface.dir/initialize.cpp.o -c /builddir/build/BUILD/espresso/src/script_interface/initialize.cpp [ 53%] Building CXX object src/script_interface/CMakeFiles/EspressoScriptInterface.dir/collision_detection/initialize.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/script_interface && /usr/bin/g++ -DEspressoScriptInterface_EXPORTS -DH5XX_USE_MPI -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src -I/builddir/build/BUILD/espresso/src/script_interface -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/core/io/mpiio -I/builddir/build/BUILD/espresso/src/core/io/reader -I/builddir/build/BUILD/espresso/src/pdbparser/include -I/builddir/build/BUILD/espresso/src/core/io/writer/SYSTEM -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -isystem /builddir/build/BUILD/espresso/libs/h5xx -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/EspressoScriptInterface.dir/collision_detection/initialize.cpp.o -c /builddir/build/BUILD/espresso/src/script_interface/collision_detection/initialize.cpp [ 53%] Building CXX object src/script_interface/CMakeFiles/EspressoScriptInterface.dir/constraints/initialize.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/script_interface && /usr/bin/g++ -DEspressoScriptInterface_EXPORTS -DH5XX_USE_MPI -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src -I/builddir/build/BUILD/espresso/src/script_interface -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/core/io/mpiio -I/builddir/build/BUILD/espresso/src/core/io/reader -I/builddir/build/BUILD/espresso/src/pdbparser/include -I/builddir/build/BUILD/espresso/src/core/io/writer/SYSTEM -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -isystem /builddir/build/BUILD/espresso/libs/h5xx -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/EspressoScriptInterface.dir/constraints/initialize.cpp.o -c /builddir/build/BUILD/espresso/src/script_interface/constraints/initialize.cpp [ 54%] Building CXX object src/script_interface/CMakeFiles/EspressoScriptInterface.dir/cluster_analysis/initialize.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/script_interface && /usr/bin/g++ -DEspressoScriptInterface_EXPORTS -DH5XX_USE_MPI -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src -I/builddir/build/BUILD/espresso/src/script_interface -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/core/io/mpiio -I/builddir/build/BUILD/espresso/src/core/io/reader -I/builddir/build/BUILD/espresso/src/pdbparser/include -I/builddir/build/BUILD/espresso/src/core/io/writer/SYSTEM -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -isystem /builddir/build/BUILD/espresso/libs/h5xx -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/EspressoScriptInterface.dir/cluster_analysis/initialize.cpp.o -c /builddir/build/BUILD/espresso/src/script_interface/cluster_analysis/initialize.cpp [ 54%] Building CXX object src/script_interface/CMakeFiles/EspressoScriptInterface.dir/lbboundaries/initialize.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/script_interface && /usr/bin/g++ -DEspressoScriptInterface_EXPORTS -DH5XX_USE_MPI -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src -I/builddir/build/BUILD/espresso/src/script_interface -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/core/io/mpiio -I/builddir/build/BUILD/espresso/src/core/io/reader -I/builddir/build/BUILD/espresso/src/pdbparser/include -I/builddir/build/BUILD/espresso/src/core/io/writer/SYSTEM -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -isystem /builddir/build/BUILD/espresso/libs/h5xx -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/EspressoScriptInterface.dir/lbboundaries/initialize.cpp.o -c /builddir/build/BUILD/espresso/src/script_interface/lbboundaries/initialize.cpp [ 54%] Building CXX object src/script_interface/CMakeFiles/EspressoScriptInterface.dir/virtual_sites/initialize.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/script_interface && /usr/bin/g++ -DEspressoScriptInterface_EXPORTS -DH5XX_USE_MPI -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src -I/builddir/build/BUILD/espresso/src/script_interface -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/core/io/mpiio -I/builddir/build/BUILD/espresso/src/core/io/reader -I/builddir/build/BUILD/espresso/src/pdbparser/include -I/builddir/build/BUILD/espresso/src/core/io/writer/SYSTEM -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -isystem /builddir/build/BUILD/espresso/libs/h5xx -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/EspressoScriptInterface.dir/virtual_sites/initialize.cpp.o -c /builddir/build/BUILD/espresso/src/script_interface/virtual_sites/initialize.cpp [ 54%] Building CXX object src/script_interface/CMakeFiles/EspressoScriptInterface.dir/observables/initialize.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/script_interface && /usr/bin/g++ -DEspressoScriptInterface_EXPORTS -DH5XX_USE_MPI -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src -I/builddir/build/BUILD/espresso/src/script_interface -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/core/io/mpiio -I/builddir/build/BUILD/espresso/src/core/io/reader -I/builddir/build/BUILD/espresso/src/pdbparser/include -I/builddir/build/BUILD/espresso/src/core/io/writer/SYSTEM -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -isystem /builddir/build/BUILD/espresso/libs/h5xx -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/EspressoScriptInterface.dir/observables/initialize.cpp.o -c /builddir/build/BUILD/espresso/src/script_interface/observables/initialize.cpp [ 54%] Building CXX object src/script_interface/CMakeFiles/EspressoScriptInterface.dir/pair_criteria/initialize.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/script_interface && /usr/bin/g++ -DEspressoScriptInterface_EXPORTS -DH5XX_USE_MPI -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src -I/builddir/build/BUILD/espresso/src/script_interface -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/core/io/mpiio -I/builddir/build/BUILD/espresso/src/core/io/reader -I/builddir/build/BUILD/espresso/src/pdbparser/include -I/builddir/build/BUILD/espresso/src/core/io/writer/SYSTEM -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -isystem /builddir/build/BUILD/espresso/libs/h5xx -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/EspressoScriptInterface.dir/pair_criteria/initialize.cpp.o -c /builddir/build/BUILD/espresso/src/script_interface/pair_criteria/initialize.cpp [ 56%] Building CXX object src/script_interface/CMakeFiles/EspressoScriptInterface.dir/mpiio/initialize.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/script_interface && /usr/bin/g++ -DEspressoScriptInterface_EXPORTS -DH5XX_USE_MPI -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src -I/builddir/build/BUILD/espresso/src/script_interface -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/core/io/mpiio -I/builddir/build/BUILD/espresso/src/core/io/reader -I/builddir/build/BUILD/espresso/src/pdbparser/include -I/builddir/build/BUILD/espresso/src/core/io/writer/SYSTEM -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -isystem /builddir/build/BUILD/espresso/libs/h5xx -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/EspressoScriptInterface.dir/mpiio/initialize.cpp.o -c /builddir/build/BUILD/espresso/src/script_interface/mpiio/initialize.cpp [ 56%] Building CXX object src/script_interface/CMakeFiles/EspressoScriptInterface.dir/ScriptInterfaceBase.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/script_interface && /usr/bin/g++ -DEspressoScriptInterface_EXPORTS -DH5XX_USE_MPI -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src -I/builddir/build/BUILD/espresso/src/script_interface -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/core/io/mpiio -I/builddir/build/BUILD/espresso/src/core/io/reader -I/builddir/build/BUILD/espresso/src/pdbparser/include -I/builddir/build/BUILD/espresso/src/core/io/writer/SYSTEM -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -isystem /builddir/build/BUILD/espresso/libs/h5xx -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/EspressoScriptInterface.dir/ScriptInterfaceBase.cpp.o -c /builddir/build/BUILD/espresso/src/script_interface/ScriptInterfaceBase.cpp [ 56%] Building CXX object src/script_interface/CMakeFiles/EspressoScriptInterface.dir/shapes/initialize.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/script_interface && /usr/bin/g++ -DEspressoScriptInterface_EXPORTS -DH5XX_USE_MPI -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src -I/builddir/build/BUILD/espresso/src/script_interface -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/core/io/mpiio -I/builddir/build/BUILD/espresso/src/core/io/reader -I/builddir/build/BUILD/espresso/src/pdbparser/include -I/builddir/build/BUILD/espresso/src/core/io/writer/SYSTEM -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -isystem /builddir/build/BUILD/espresso/libs/h5xx -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/EspressoScriptInterface.dir/shapes/initialize.cpp.o -c /builddir/build/BUILD/espresso/src/script_interface/shapes/initialize.cpp [ 56%] Building CXX object src/script_interface/CMakeFiles/EspressoScriptInterface.dir/ParallelScriptInterface.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/script_interface && /usr/bin/g++ -DEspressoScriptInterface_EXPORTS -DH5XX_USE_MPI -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src -I/builddir/build/BUILD/espresso/src/script_interface -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/core/io/mpiio -I/builddir/build/BUILD/espresso/src/core/io/reader -I/builddir/build/BUILD/espresso/src/pdbparser/include -I/builddir/build/BUILD/espresso/src/core/io/writer/SYSTEM -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -isystem /builddir/build/BUILD/espresso/libs/h5xx -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/EspressoScriptInterface.dir/ParallelScriptInterface.cpp.o -c /builddir/build/BUILD/espresso/src/script_interface/ParallelScriptInterface.cpp [ 56%] Building CXX object src/script_interface/CMakeFiles/EspressoScriptInterface.dir/h5md/initialize.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/script_interface && /usr/bin/g++ -DEspressoScriptInterface_EXPORTS -DH5XX_USE_MPI -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src -I/builddir/build/BUILD/espresso/src/script_interface -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/core/io/mpiio -I/builddir/build/BUILD/espresso/src/core/io/reader -I/builddir/build/BUILD/espresso/src/pdbparser/include -I/builddir/build/BUILD/espresso/src/core/io/writer/SYSTEM -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -isystem /builddir/build/BUILD/espresso/libs/h5xx -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/EspressoScriptInterface.dir/h5md/initialize.cpp.o -c /builddir/build/BUILD/espresso/src/script_interface/h5md/initialize.cpp [ 57%] Building CXX object src/script_interface/CMakeFiles/EspressoScriptInterface.dir/h5md/h5md.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/script_interface && /usr/bin/g++ -DEspressoScriptInterface_EXPORTS -DH5XX_USE_MPI -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src -I/builddir/build/BUILD/espresso/src/script_interface -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/core/io/mpiio -I/builddir/build/BUILD/espresso/src/core/io/reader -I/builddir/build/BUILD/espresso/src/pdbparser/include -I/builddir/build/BUILD/espresso/src/core/io/writer/SYSTEM -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -isystem /builddir/build/BUILD/espresso/libs/h5xx -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/EspressoScriptInterface.dir/h5md/h5md.cpp.o -c /builddir/build/BUILD/espresso/src/script_interface/h5md/h5md.cpp [ 57%] Linking CXX shared library EspressoScriptInterface.so cd /builddir/build/BUILD/espresso/mpich/src/script_interface && /usr/bin/cmake -E cmake_link_script CMakeFiles/EspressoScriptInterface.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -Wl,--as-needed -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,-rpath,/usr/lib64/python3.9/site-packages/mpich/espressomd -shared -Wl,-soname,EspressoScriptInterface.so -o EspressoScriptInterface.so CMakeFiles/EspressoScriptInterface.dir/accumulators/initialize.cpp.o CMakeFiles/EspressoScriptInterface.dir/initialize.cpp.o CMakeFiles/EspressoScriptInterface.dir/collision_detection/initialize.cpp.o CMakeFiles/EspressoScriptInterface.dir/constraints/initialize.cpp.o CMakeFiles/EspressoScriptInterface.dir/cluster_analysis/initialize.cpp.o CMakeFiles/EspressoScriptInterface.dir/lbboundaries/initialize.cpp.o CMakeFiles/EspressoScriptInterface.dir/virtual_sites/initialize.cpp.o CMakeFiles/EspressoScriptInterface.dir/observables/initialize.cpp.o CMakeFiles/EspressoScriptInterface.dir/pair_criteria/initialize.cpp.o CMakeFiles/EspressoScriptInterface.dir/mpiio/initialize.cpp.o CMakeFiles/EspressoScriptInterface.dir/ScriptInterfaceBase.cpp.o CMakeFiles/EspressoScriptInterface.dir/shapes/initialize.cpp.o CMakeFiles/EspressoScriptInterface.dir/ParallelScriptInterface.cpp.o CMakeFiles/EspressoScriptInterface.dir/h5md/initialize.cpp.o CMakeFiles/EspressoScriptInterface.dir/h5md/h5md.cpp.o ../core/shapes/Shapes.so ../core/cluster_analysis/core_cluster_analysis.so ../core/io/mpiio/mpiio.so ../core/io/reader/pdbreader.so ../core/io/writer/H5mdCore.so ../core/EspressoCore.so ../config/EspressoConfig.so /usr/lib64/mpich/lib/libboost_mpi.so /usr/lib64/libboost_serialization.so ../pdbparser/pdbparser.so /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libboost_filesystem.so make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 57%] Built target EspressoScriptInterface /usr/bin/make -f src/python/object_in_fluid/CMakeFiles/object_in_fluid.dir/build.make src/python/object_in_fluid/CMakeFiles/object_in_fluid.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/object_in_fluid /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/python/object_in_fluid /builddir/build/BUILD/espresso/mpich/src/python/object_in_fluid/CMakeFiles/object_in_fluid.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/espresso/mpich/src/python/object_in_fluid/CMakeFiles/object_in_fluid.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/espresso/mpich/src/python/object_in_fluid/CMakeFiles/object_in_fluid.dir/depend.internal". Dependee "/builddir/build/BUILD/espresso/mpich/src/python/object_in_fluid/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/espresso/mpich/src/python/object_in_fluid/CMakeFiles/object_in_fluid.dir/depend.internal". Scanning dependencies of target object_in_fluid make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' /usr/bin/make -f src/python/object_in_fluid/CMakeFiles/object_in_fluid.dir/build.make src/python/object_in_fluid/CMakeFiles/object_in_fluid.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich/src/python/object_in_fluid && /usr/bin/cmake -E copy /builddir/build/BUILD/espresso/src/python/object_in_fluid/__init__.py /builddir/build/BUILD/espresso/mpich/src/python/object_in_fluid//__init__.py cd /builddir/build/BUILD/espresso/mpich/src/python/object_in_fluid && /usr/bin/cmake -E copy /builddir/build/BUILD/espresso/src/python/object_in_fluid/oif_classes.py /builddir/build/BUILD/espresso/mpich/src/python/object_in_fluid//oif_classes.py cd /builddir/build/BUILD/espresso/mpich/src/python/object_in_fluid && /usr/bin/cmake -E copy /builddir/build/BUILD/espresso/src/python/object_in_fluid/oif_utils.py /builddir/build/BUILD/espresso/mpich/src/python/object_in_fluid//oif_utils.py make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 57%] Built target object_in_fluid /usr/bin/make -f src/python/espressomd/CMakeFiles/gen_pxiconfig.dir/build.make src/python/espressomd/CMakeFiles/gen_pxiconfig.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' [ 59%] Generating gen_pxiconfig.cpp cd /builddir/build/BUILD/espresso/mpich/src/python/espressomd && /usr/bin/python3 /builddir/build/BUILD/espresso/src/python/espressomd/gen_pxiconfig.py /builddir/build/BUILD/espresso/src/config/features.def /builddir/build/BUILD/espresso/mpich/src/python/espressomd/gen_pxiconfig.cpp Reading definitions from /builddir/build/BUILD/espresso/src/config/features.def... Done. Writing /builddir/build/BUILD/espresso/mpich/src/python/espressomd/gen_pxiconfig.cpp... Done. cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/espressomd /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/python/espressomd /builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/gen_pxiconfig.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/gen_pxiconfig.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/gen_pxiconfig.dir/depend.internal". Dependee "/builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/gen_pxiconfig.dir/depend.internal". Scanning dependencies of target gen_pxiconfig make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' /usr/bin/make -f src/python/espressomd/CMakeFiles/gen_pxiconfig.dir/build.make src/python/espressomd/CMakeFiles/gen_pxiconfig.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' [ 59%] Building CXX object src/python/espressomd/CMakeFiles/gen_pxiconfig.dir/gen_pxiconfig.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/python/espressomd && /usr/bin/g++ -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -std=c++14 -o CMakeFiles/gen_pxiconfig.dir/gen_pxiconfig.cpp.o -c /builddir/build/BUILD/espresso/mpich/src/python/espressomd/gen_pxiconfig.cpp [ 59%] Linking CXX executable gen_pxiconfig cd /builddir/build/BUILD/espresso/mpich/src/python/espressomd && /usr/bin/cmake -E cmake_link_script CMakeFiles/gen_pxiconfig.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -Wl,-rpath,/usr/lib64/python3.9/site-packages/mpich/espressomd CMakeFiles/gen_pxiconfig.dir/gen_pxiconfig.cpp.o -o gen_pxiconfig ../../config/EspressoConfig.so make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 59%] Built target gen_pxiconfig /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_thermostat.dir/build.make src/python/espressomd/CMakeFiles/espressomd_thermostat.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' [ 59%] Generating myconfig.pxi cd /builddir/build/BUILD/espresso/mpich/src/python/espressomd && ./gen_pxiconfig > /builddir/build/BUILD/espresso/mpich/src/python/espressomd/myconfig.pxi [ 59%] Generating thermostat.cpp cd /builddir/build/BUILD/espresso/mpich/src/python && /usr/bin/cython -3 --cplus --directive embedsignature=True --directive binding=True -I /builddir/build/BUILD/espresso/src/python/espressomd -I /builddir/build/BUILD/espresso/mpich/src/python/espressomd /builddir/build/BUILD/espresso/src/python/espressomd/thermostat.pyx -o /builddir/build/BUILD/espresso/mpich/src/python/espressomd/thermostat.cpp cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/espressomd /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/python/espressomd /builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_thermostat.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_thermostat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_thermostat.dir/depend.internal". Dependee "/builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_thermostat.dir/depend.internal". Scanning dependencies of target espressomd_thermostat make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_thermostat.dir/build.make src/python/espressomd/CMakeFiles/espressomd_thermostat.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' [ 60%] Building CXX object src/python/espressomd/CMakeFiles/espressomd_thermostat.dir/thermostat.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/python/espressomd && /usr/bin/g++ -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -Despressomd_thermostat_EXPORTS -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/script_interface -I/builddir/build/BUILD/espresso/src/core/io/mpiio -I/builddir/build/BUILD/espresso/src/core/io/reader -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/python3.9 -isystem /usr/lib64/python3.9/site-packages/numpy/core/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -Wno-pedantic -Wno-cpp -Wno-strict-aliasing -Wno-maybe-uninitialized -Wno-unused-variable -o CMakeFiles/espressomd_thermostat.dir/thermostat.cpp.o -c /builddir/build/BUILD/espresso/mpich/src/python/espressomd/thermostat.cpp [ 60%] Linking CXX shared library thermostat.so cd /builddir/build/BUILD/espresso/mpich/src/python/espressomd && /usr/bin/cmake -E cmake_link_script CMakeFiles/espressomd_thermostat.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -Wl,--as-needed -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,-rpath,/usr/lib64/python3.9/site-packages/mpich/espressomd -shared -Wl,-soname,thermostat.so -o thermostat.so CMakeFiles/espressomd_thermostat.dir/thermostat.cpp.o ../../script_interface/EspressoScriptInterface.so ../../core/shapes/Shapes.so ../../core/cluster_analysis/core_cluster_analysis.so ../../core/io/mpiio/mpiio.so ../../core/io/reader/pdbreader.so ../../core/EspressoCore.so ../../config/EspressoConfig.so /usr/lib64/mpich/lib/libboost_mpi.so /usr/lib64/libboost_serialization.so ../../pdbparser/pdbparser.so /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so -Wl,-rpath-link,/builddir/build/BUILD/espresso/mpich/src/core/io/writer:/usr/lib64/mpich/lib make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 60%] Built target espressomd_thermostat /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_code_info.dir/build.make src/python/espressomd/CMakeFiles/espressomd_code_info.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' [ 60%] Generating code_info.pyx cd /builddir/build/BUILD/espresso/src/python/espressomd && /usr/bin/python3 gen_code_info.py /builddir/build/BUILD/espresso/src/config/features.def /builddir/build/BUILD/espresso/mpich/src/python/espressomd/code_info.pyx Reading definitions from /builddir/build/BUILD/espresso/src/config/features.def... Done. Writing /builddir/build/BUILD/espresso/mpich/src/python/espressomd/code_info.pyx... Done. [ 60%] Generating code_info.cpp cd /builddir/build/BUILD/espresso/mpich/src/python && /usr/bin/cython -3 --cplus --directive embedsignature=True --directive binding=True -I /builddir/build/BUILD/espresso/src/python/espressomd -I /builddir/build/BUILD/espresso/mpich/src/python/espressomd /builddir/build/BUILD/espresso/mpich/src/python/espressomd/code_info.pyx -o /builddir/build/BUILD/espresso/mpich/src/python/espressomd/code_info.cpp cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/espressomd /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/python/espressomd /builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_code_info.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_code_info.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_code_info.dir/depend.internal". Dependee "/builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_code_info.dir/depend.internal". Scanning dependencies of target espressomd_code_info make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_code_info.dir/build.make src/python/espressomd/CMakeFiles/espressomd_code_info.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' [ 62%] Building CXX object src/python/espressomd/CMakeFiles/espressomd_code_info.dir/code_info.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/python/espressomd && /usr/bin/g++ -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -Despressomd_code_info_EXPORTS -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/script_interface -I/builddir/build/BUILD/espresso/src/core/io/mpiio -I/builddir/build/BUILD/espresso/src/core/io/reader -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/python3.9 -isystem /usr/lib64/python3.9/site-packages/numpy/core/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -Wno-pedantic -Wno-cpp -Wno-strict-aliasing -Wno-maybe-uninitialized -Wno-unused-variable -o CMakeFiles/espressomd_code_info.dir/code_info.cpp.o -c /builddir/build/BUILD/espresso/mpich/src/python/espressomd/code_info.cpp [ 62%] Linking CXX shared library code_info.so cd /builddir/build/BUILD/espresso/mpich/src/python/espressomd && /usr/bin/cmake -E cmake_link_script CMakeFiles/espressomd_code_info.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -Wl,--as-needed -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,-rpath,/usr/lib64/python3.9/site-packages/mpich/espressomd -shared -Wl,-soname,code_info.so -o code_info.so CMakeFiles/espressomd_code_info.dir/code_info.cpp.o ../../script_interface/EspressoScriptInterface.so ../../core/shapes/Shapes.so ../../core/cluster_analysis/core_cluster_analysis.so ../../core/io/mpiio/mpiio.so ../../core/io/reader/pdbreader.so ../../core/EspressoCore.so ../../config/EspressoConfig.so /usr/lib64/mpich/lib/libboost_mpi.so /usr/lib64/libboost_serialization.so ../../pdbparser/pdbparser.so /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so -Wl,-rpath-link,/builddir/build/BUILD/espresso/mpich/src/core/io/writer:/usr/lib64/mpich/lib make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 62%] Built target espressomd_code_info /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_visualization_opengl.dir/build.make src/python/espressomd/CMakeFiles/espressomd_visualization_opengl.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' [ 62%] Generating visualization_opengl.cpp cd /builddir/build/BUILD/espresso/mpich/src/python && /usr/bin/cython -3 --cplus --directive embedsignature=True --directive binding=True -I /builddir/build/BUILD/espresso/src/python/espressomd -I /builddir/build/BUILD/espresso/mpich/src/python/espressomd /builddir/build/BUILD/espresso/src/python/espressomd/visualization_opengl.pyx -o /builddir/build/BUILD/espresso/mpich/src/python/espressomd/visualization_opengl.cpp cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/espressomd /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/python/espressomd /builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_visualization_opengl.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_visualization_opengl.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_visualization_opengl.dir/depend.internal". Dependee "/builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_visualization_opengl.dir/depend.internal". Scanning dependencies of target espressomd_visualization_opengl make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_visualization_opengl.dir/build.make src/python/espressomd/CMakeFiles/espressomd_visualization_opengl.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' [ 62%] Building CXX object src/python/espressomd/CMakeFiles/espressomd_visualization_opengl.dir/visualization_opengl.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/python/espressomd && /usr/bin/g++ -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -Despressomd_visualization_opengl_EXPORTS -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/script_interface -I/builddir/build/BUILD/espresso/src/core/io/mpiio -I/builddir/build/BUILD/espresso/src/core/io/reader -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/python3.9 -isystem /usr/lib64/python3.9/site-packages/numpy/core/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -Wno-pedantic -Wno-cpp -Wno-strict-aliasing -Wno-maybe-uninitialized -Wno-unused-variable -o CMakeFiles/espressomd_visualization_opengl.dir/visualization_opengl.cpp.o -c /builddir/build/BUILD/espresso/mpich/src/python/espressomd/visualization_opengl.cpp [ 62%] Linking CXX shared library visualization_opengl.so cd /builddir/build/BUILD/espresso/mpich/src/python/espressomd && /usr/bin/cmake -E cmake_link_script CMakeFiles/espressomd_visualization_opengl.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -Wl,--as-needed -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,-rpath,/usr/lib64/python3.9/site-packages/mpich/espressomd -shared -Wl,-soname,visualization_opengl.so -o visualization_opengl.so CMakeFiles/espressomd_visualization_opengl.dir/visualization_opengl.cpp.o ../../script_interface/EspressoScriptInterface.so ../../core/shapes/Shapes.so ../../core/cluster_analysis/core_cluster_analysis.so ../../core/io/mpiio/mpiio.so ../../core/io/reader/pdbreader.so ../../core/EspressoCore.so ../../config/EspressoConfig.so /usr/lib64/mpich/lib/libboost_mpi.so /usr/lib64/libboost_serialization.so ../../pdbparser/pdbparser.so /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so -Wl,-rpath-link,/builddir/build/BUILD/espresso/mpich/src/core/io/writer:/usr/lib64/mpich/lib make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 64%] Built target espressomd_visualization_opengl /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_visualization_mayavi.dir/build.make src/python/espressomd/CMakeFiles/espressomd_visualization_mayavi.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' [ 65%] Generating visualization_mayavi.cpp cd /builddir/build/BUILD/espresso/mpich/src/python && /usr/bin/cython -3 --cplus --directive embedsignature=True --directive binding=True -I /builddir/build/BUILD/espresso/src/python/espressomd -I /builddir/build/BUILD/espresso/mpich/src/python/espressomd /builddir/build/BUILD/espresso/src/python/espressomd/visualization_mayavi.pyx -o /builddir/build/BUILD/espresso/mpich/src/python/espressomd/visualization_mayavi.cpp cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/espressomd /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/python/espressomd /builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_visualization_mayavi.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_visualization_mayavi.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_visualization_mayavi.dir/depend.internal". Dependee "/builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_visualization_mayavi.dir/depend.internal". Scanning dependencies of target espressomd_visualization_mayavi make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_visualization_mayavi.dir/build.make src/python/espressomd/CMakeFiles/espressomd_visualization_mayavi.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' [ 65%] Building CXX object src/python/espressomd/CMakeFiles/espressomd_visualization_mayavi.dir/visualization_mayavi.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/python/espressomd && /usr/bin/g++ -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -Despressomd_visualization_mayavi_EXPORTS -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/script_interface -I/builddir/build/BUILD/espresso/src/core/io/mpiio -I/builddir/build/BUILD/espresso/src/core/io/reader -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/python3.9 -isystem /usr/lib64/python3.9/site-packages/numpy/core/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -Wno-pedantic -Wno-cpp -Wno-strict-aliasing -Wno-maybe-uninitialized -Wno-unused-variable -o CMakeFiles/espressomd_visualization_mayavi.dir/visualization_mayavi.cpp.o -c /builddir/build/BUILD/espresso/mpich/src/python/espressomd/visualization_mayavi.cpp [ 65%] Linking CXX shared library visualization_mayavi.so cd /builddir/build/BUILD/espresso/mpich/src/python/espressomd && /usr/bin/cmake -E cmake_link_script CMakeFiles/espressomd_visualization_mayavi.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -Wl,--as-needed -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,-rpath,/usr/lib64/python3.9/site-packages/mpich/espressomd -shared -Wl,-soname,visualization_mayavi.so -o visualization_mayavi.so CMakeFiles/espressomd_visualization_mayavi.dir/visualization_mayavi.cpp.o ../../script_interface/EspressoScriptInterface.so ../../core/shapes/Shapes.so ../../core/cluster_analysis/core_cluster_analysis.so ../../core/io/mpiio/mpiio.so ../../core/io/reader/pdbreader.so ../../core/EspressoCore.so ../../config/EspressoConfig.so /usr/lib64/mpich/lib/libboost_mpi.so /usr/lib64/libboost_serialization.so ../../pdbparser/pdbparser.so /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so -Wl,-rpath-link,/builddir/build/BUILD/espresso/mpich/src/core/io/writer:/usr/lib64/mpich/lib make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 65%] Built target espressomd_visualization_mayavi /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_visualization.dir/build.make src/python/espressomd/CMakeFiles/espressomd_visualization.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' [ 65%] Generating visualization.cpp cd /builddir/build/BUILD/espresso/mpich/src/python && /usr/bin/cython -3 --cplus --directive embedsignature=True --directive binding=True -I /builddir/build/BUILD/espresso/src/python/espressomd -I /builddir/build/BUILD/espresso/mpich/src/python/espressomd /builddir/build/BUILD/espresso/src/python/espressomd/visualization.pyx -o /builddir/build/BUILD/espresso/mpich/src/python/espressomd/visualization.cpp cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/espressomd /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/python/espressomd /builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_visualization.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_visualization.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_visualization.dir/depend.internal". Dependee "/builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_visualization.dir/depend.internal". Scanning dependencies of target espressomd_visualization make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_visualization.dir/build.make src/python/espressomd/CMakeFiles/espressomd_visualization.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' [ 65%] Building CXX object src/python/espressomd/CMakeFiles/espressomd_visualization.dir/visualization.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/python/espressomd && /usr/bin/g++ -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -Despressomd_visualization_EXPORTS -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/script_interface -I/builddir/build/BUILD/espresso/src/core/io/mpiio -I/builddir/build/BUILD/espresso/src/core/io/reader -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/python3.9 -isystem /usr/lib64/python3.9/site-packages/numpy/core/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -Wno-pedantic -Wno-cpp -Wno-strict-aliasing -Wno-maybe-uninitialized -Wno-unused-variable -o CMakeFiles/espressomd_visualization.dir/visualization.cpp.o -c /builddir/build/BUILD/espresso/mpich/src/python/espressomd/visualization.cpp [ 65%] Linking CXX shared library visualization.so cd /builddir/build/BUILD/espresso/mpich/src/python/espressomd && /usr/bin/cmake -E cmake_link_script CMakeFiles/espressomd_visualization.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -Wl,--as-needed -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,-rpath,/usr/lib64/python3.9/site-packages/mpich/espressomd -shared -Wl,-soname,visualization.so -o visualization.so CMakeFiles/espressomd_visualization.dir/visualization.cpp.o ../../script_interface/EspressoScriptInterface.so ../../core/shapes/Shapes.so ../../core/cluster_analysis/core_cluster_analysis.so ../../core/io/mpiio/mpiio.so ../../core/io/reader/pdbreader.so ../../core/EspressoCore.so ../../config/EspressoConfig.so /usr/lib64/mpich/lib/libboost_mpi.so /usr/lib64/libboost_serialization.so ../../pdbparser/pdbparser.so /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so -Wl,-rpath-link,/builddir/build/BUILD/espresso/mpich/src/core/io/writer:/usr/lib64/mpich/lib make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 65%] Built target espressomd_visualization /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_version.dir/build.make src/python/espressomd/CMakeFiles/espressomd_version.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' [ 65%] Generating version.cpp cd /builddir/build/BUILD/espresso/mpich/src/python && /usr/bin/cython -3 --cplus --directive embedsignature=True --directive binding=True -I /builddir/build/BUILD/espresso/src/python/espressomd -I /builddir/build/BUILD/espresso/mpich/src/python/espressomd /builddir/build/BUILD/espresso/src/python/espressomd/version.pyx -o /builddir/build/BUILD/espresso/mpich/src/python/espressomd/version.cpp cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/espressomd /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/python/espressomd /builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_version.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_version.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_version.dir/depend.internal". Dependee "/builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_version.dir/depend.internal". Scanning dependencies of target espressomd_version make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_version.dir/build.make src/python/espressomd/CMakeFiles/espressomd_version.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' [ 65%] Building CXX object src/python/espressomd/CMakeFiles/espressomd_version.dir/version.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/python/espressomd && /usr/bin/g++ -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -Despressomd_version_EXPORTS -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/script_interface -I/builddir/build/BUILD/espresso/src/core/io/mpiio -I/builddir/build/BUILD/espresso/src/core/io/reader -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/python3.9 -isystem /usr/lib64/python3.9/site-packages/numpy/core/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -Wno-pedantic -Wno-cpp -Wno-strict-aliasing -Wno-maybe-uninitialized -Wno-unused-variable -o CMakeFiles/espressomd_version.dir/version.cpp.o -c /builddir/build/BUILD/espresso/mpich/src/python/espressomd/version.cpp [ 67%] Linking CXX shared library version.so cd /builddir/build/BUILD/espresso/mpich/src/python/espressomd && /usr/bin/cmake -E cmake_link_script CMakeFiles/espressomd_version.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -Wl,--as-needed -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,-rpath,/usr/lib64/python3.9/site-packages/mpich/espressomd -shared -Wl,-soname,version.so -o version.so CMakeFiles/espressomd_version.dir/version.cpp.o ../../script_interface/EspressoScriptInterface.so ../../core/shapes/Shapes.so ../../core/cluster_analysis/core_cluster_analysis.so ../../core/io/mpiio/mpiio.so ../../core/io/reader/pdbreader.so ../../core/EspressoCore.so ../../config/EspressoConfig.so /usr/lib64/mpich/lib/libboost_mpi.so /usr/lib64/libboost_serialization.so ../../pdbparser/pdbparser.so /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so -Wl,-rpath-link,/builddir/build/BUILD/espresso/mpich/src/core/io/writer:/usr/lib64/mpich/lib make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 67%] Built target espressomd_version /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_system.dir/build.make src/python/espressomd/CMakeFiles/espressomd_system.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' [ 67%] Generating system.cpp cd /builddir/build/BUILD/espresso/mpich/src/python && /usr/bin/cython -3 --cplus --directive embedsignature=True --directive binding=True -I /builddir/build/BUILD/espresso/src/python/espressomd -I /builddir/build/BUILD/espresso/mpich/src/python/espressomd /builddir/build/BUILD/espresso/src/python/espressomd/system.pyx -o /builddir/build/BUILD/espresso/mpich/src/python/espressomd/system.cpp cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/espressomd /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/python/espressomd /builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_system.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_system.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_system.dir/depend.internal". Dependee "/builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_system.dir/depend.internal". Scanning dependencies of target espressomd_system make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_system.dir/build.make src/python/espressomd/CMakeFiles/espressomd_system.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' [ 67%] Building CXX object src/python/espressomd/CMakeFiles/espressomd_system.dir/system.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/python/espressomd && /usr/bin/g++ -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -Despressomd_system_EXPORTS -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/script_interface -I/builddir/build/BUILD/espresso/src/core/io/mpiio -I/builddir/build/BUILD/espresso/src/core/io/reader -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/python3.9 -isystem /usr/lib64/python3.9/site-packages/numpy/core/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -Wno-pedantic -Wno-cpp -Wno-strict-aliasing -Wno-maybe-uninitialized -Wno-unused-variable -o CMakeFiles/espressomd_system.dir/system.cpp.o -c /builddir/build/BUILD/espresso/mpich/src/python/espressomd/system.cpp [ 67%] Linking CXX shared library system.so cd /builddir/build/BUILD/espresso/mpich/src/python/espressomd && /usr/bin/cmake -E cmake_link_script CMakeFiles/espressomd_system.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -Wl,--as-needed -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,-rpath,/usr/lib64/python3.9/site-packages/mpich/espressomd -shared -Wl,-soname,system.so -o system.so CMakeFiles/espressomd_system.dir/system.cpp.o ../../script_interface/EspressoScriptInterface.so ../../core/shapes/Shapes.so ../../core/cluster_analysis/core_cluster_analysis.so ../../core/io/mpiio/mpiio.so ../../core/io/reader/pdbreader.so ../../core/EspressoCore.so ../../config/EspressoConfig.so /usr/lib64/mpich/lib/libboost_mpi.so /usr/lib64/libboost_serialization.so ../../pdbparser/pdbparser.so /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so -Wl,-rpath-link,/builddir/build/BUILD/espresso/mpich/src/core/io/writer:/usr/lib64/mpich/lib make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 68%] Built target espressomd_system /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_electrostatic_extensions.dir/build.make src/python/espressomd/CMakeFiles/espressomd_electrostatic_extensions.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' [ 68%] Generating electrostatic_extensions.cpp cd /builddir/build/BUILD/espresso/mpich/src/python && /usr/bin/cython -3 --cplus --directive embedsignature=True --directive binding=True -I /builddir/build/BUILD/espresso/src/python/espressomd -I /builddir/build/BUILD/espresso/mpich/src/python/espressomd /builddir/build/BUILD/espresso/src/python/espressomd/electrostatic_extensions.pyx -o /builddir/build/BUILD/espresso/mpich/src/python/espressomd/electrostatic_extensions.cpp cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/espressomd /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/python/espressomd /builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_electrostatic_extensions.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_electrostatic_extensions.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_electrostatic_extensions.dir/depend.internal". Dependee "/builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_electrostatic_extensions.dir/depend.internal". Scanning dependencies of target espressomd_electrostatic_extensions make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_electrostatic_extensions.dir/build.make src/python/espressomd/CMakeFiles/espressomd_electrostatic_extensions.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' [ 68%] Building CXX object src/python/espressomd/CMakeFiles/espressomd_electrostatic_extensions.dir/electrostatic_extensions.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/python/espressomd && /usr/bin/g++ -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -Despressomd_electrostatic_extensions_EXPORTS -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/script_interface -I/builddir/build/BUILD/espresso/src/core/io/mpiio -I/builddir/build/BUILD/espresso/src/core/io/reader -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/python3.9 -isystem /usr/lib64/python3.9/site-packages/numpy/core/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -Wno-pedantic -Wno-cpp -Wno-strict-aliasing -Wno-maybe-uninitialized -Wno-unused-variable -o CMakeFiles/espressomd_electrostatic_extensions.dir/electrostatic_extensions.cpp.o -c /builddir/build/BUILD/espresso/mpich/src/python/espressomd/electrostatic_extensions.cpp [ 68%] Linking CXX shared library electrostatic_extensions.so cd /builddir/build/BUILD/espresso/mpich/src/python/espressomd && /usr/bin/cmake -E cmake_link_script CMakeFiles/espressomd_electrostatic_extensions.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -Wl,--as-needed -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,-rpath,/usr/lib64/python3.9/site-packages/mpich/espressomd -shared -Wl,-soname,electrostatic_extensions.so -o electrostatic_extensions.so CMakeFiles/espressomd_electrostatic_extensions.dir/electrostatic_extensions.cpp.o ../../script_interface/EspressoScriptInterface.so ../../core/shapes/Shapes.so ../../core/cluster_analysis/core_cluster_analysis.so ../../core/io/mpiio/mpiio.so ../../core/io/reader/pdbreader.so ../../core/EspressoCore.so ../../config/EspressoConfig.so /usr/lib64/mpich/lib/libboost_mpi.so /usr/lib64/libboost_serialization.so ../../pdbparser/pdbparser.so /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so -Wl,-rpath-link,/builddir/build/BUILD/espresso/mpich/src/core/io/writer:/usr/lib64/mpich/lib make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 70%] Built target espressomd_electrostatic_extensions /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_utils.dir/build.make src/python/espressomd/CMakeFiles/espressomd_utils.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' [ 70%] Generating utils.cpp cd /builddir/build/BUILD/espresso/mpich/src/python && /usr/bin/cython -3 --cplus --directive embedsignature=True --directive binding=True -I /builddir/build/BUILD/espresso/src/python/espressomd -I /builddir/build/BUILD/espresso/mpich/src/python/espressomd /builddir/build/BUILD/espresso/src/python/espressomd/utils.pyx -o /builddir/build/BUILD/espresso/mpich/src/python/espressomd/utils.cpp cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/espressomd /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/python/espressomd /builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_utils.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_utils.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_utils.dir/depend.internal". Dependee "/builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_utils.dir/depend.internal". Scanning dependencies of target espressomd_utils make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_utils.dir/build.make src/python/espressomd/CMakeFiles/espressomd_utils.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' [ 70%] Building CXX object src/python/espressomd/CMakeFiles/espressomd_utils.dir/utils.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/python/espressomd && /usr/bin/g++ -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -Despressomd_utils_EXPORTS -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/script_interface -I/builddir/build/BUILD/espresso/src/core/io/mpiio -I/builddir/build/BUILD/espresso/src/core/io/reader -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/python3.9 -isystem /usr/lib64/python3.9/site-packages/numpy/core/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -Wno-pedantic -Wno-cpp -Wno-strict-aliasing -Wno-maybe-uninitialized -Wno-unused-variable -o CMakeFiles/espressomd_utils.dir/utils.cpp.o -c /builddir/build/BUILD/espresso/mpich/src/python/espressomd/utils.cpp [ 71%] Linking CXX shared library utils.so cd /builddir/build/BUILD/espresso/mpich/src/python/espressomd && /usr/bin/cmake -E cmake_link_script CMakeFiles/espressomd_utils.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -Wl,--as-needed -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,-rpath,/usr/lib64/python3.9/site-packages/mpich/espressomd -shared -Wl,-soname,utils.so -o utils.so CMakeFiles/espressomd_utils.dir/utils.cpp.o ../../script_interface/EspressoScriptInterface.so ../../core/shapes/Shapes.so ../../core/cluster_analysis/core_cluster_analysis.so ../../core/io/mpiio/mpiio.so ../../core/io/reader/pdbreader.so ../../core/EspressoCore.so ../../config/EspressoConfig.so /usr/lib64/mpich/lib/libboost_mpi.so /usr/lib64/libboost_serialization.so ../../pdbparser/pdbparser.so /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so -Wl,-rpath-link,/builddir/build/BUILD/espresso/mpich/src/core/io/writer:/usr/lib64/mpich/lib make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 71%] Built target espressomd_utils /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_electrokinetics.dir/build.make src/python/espressomd/CMakeFiles/espressomd_electrokinetics.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' [ 73%] Generating electrokinetics.cpp cd /builddir/build/BUILD/espresso/mpich/src/python && /usr/bin/cython -3 --cplus --directive embedsignature=True --directive binding=True -I /builddir/build/BUILD/espresso/src/python/espressomd -I /builddir/build/BUILD/espresso/mpich/src/python/espressomd /builddir/build/BUILD/espresso/src/python/espressomd/electrokinetics.pyx -o /builddir/build/BUILD/espresso/mpich/src/python/espressomd/electrokinetics.cpp cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/espressomd /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/python/espressomd /builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_electrokinetics.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_electrokinetics.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_electrokinetics.dir/depend.internal". Dependee "/builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_electrokinetics.dir/depend.internal". Scanning dependencies of target espressomd_electrokinetics make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_electrokinetics.dir/build.make src/python/espressomd/CMakeFiles/espressomd_electrokinetics.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' [ 73%] Building CXX object src/python/espressomd/CMakeFiles/espressomd_electrokinetics.dir/electrokinetics.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/python/espressomd && /usr/bin/g++ -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -Despressomd_electrokinetics_EXPORTS -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/script_interface -I/builddir/build/BUILD/espresso/src/core/io/mpiio -I/builddir/build/BUILD/espresso/src/core/io/reader -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/python3.9 -isystem /usr/lib64/python3.9/site-packages/numpy/core/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -Wno-pedantic -Wno-cpp -Wno-strict-aliasing -Wno-maybe-uninitialized -Wno-unused-variable -o CMakeFiles/espressomd_electrokinetics.dir/electrokinetics.cpp.o -c /builddir/build/BUILD/espresso/mpich/src/python/espressomd/electrokinetics.cpp [ 73%] Linking CXX shared library electrokinetics.so cd /builddir/build/BUILD/espresso/mpich/src/python/espressomd && /usr/bin/cmake -E cmake_link_script CMakeFiles/espressomd_electrokinetics.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -Wl,--as-needed -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,-rpath,/usr/lib64/python3.9/site-packages/mpich/espressomd -shared -Wl,-soname,electrokinetics.so -o electrokinetics.so CMakeFiles/espressomd_electrokinetics.dir/electrokinetics.cpp.o ../../script_interface/EspressoScriptInterface.so ../../core/shapes/Shapes.so ../../core/cluster_analysis/core_cluster_analysis.so ../../core/io/mpiio/mpiio.so ../../core/io/reader/pdbreader.so ../../core/EspressoCore.so ../../config/EspressoConfig.so /usr/lib64/mpich/lib/libboost_mpi.so /usr/lib64/libboost_serialization.so ../../pdbparser/pdbparser.so /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so -Wl,-rpath-link,/builddir/build/BUILD/espresso/mpich/src/core/io/writer:/usr/lib64/mpich/lib make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 73%] Built target espressomd_electrokinetics /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_cellsystem.dir/build.make src/python/espressomd/CMakeFiles/espressomd_cellsystem.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' [ 73%] Generating cellsystem.cpp cd /builddir/build/BUILD/espresso/mpich/src/python && /usr/bin/cython -3 --cplus --directive embedsignature=True --directive binding=True -I /builddir/build/BUILD/espresso/src/python/espressomd -I /builddir/build/BUILD/espresso/mpich/src/python/espressomd /builddir/build/BUILD/espresso/src/python/espressomd/cellsystem.pyx -o /builddir/build/BUILD/espresso/mpich/src/python/espressomd/cellsystem.cpp cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/espressomd /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/python/espressomd /builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_cellsystem.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_cellsystem.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_cellsystem.dir/depend.internal". Dependee "/builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_cellsystem.dir/depend.internal". Scanning dependencies of target espressomd_cellsystem make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_cellsystem.dir/build.make src/python/espressomd/CMakeFiles/espressomd_cellsystem.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' [ 75%] Building CXX object src/python/espressomd/CMakeFiles/espressomd_cellsystem.dir/cellsystem.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/python/espressomd && /usr/bin/g++ -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -Despressomd_cellsystem_EXPORTS -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/script_interface -I/builddir/build/BUILD/espresso/src/core/io/mpiio -I/builddir/build/BUILD/espresso/src/core/io/reader -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/python3.9 -isystem /usr/lib64/python3.9/site-packages/numpy/core/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -Wno-pedantic -Wno-cpp -Wno-strict-aliasing -Wno-maybe-uninitialized -Wno-unused-variable -o CMakeFiles/espressomd_cellsystem.dir/cellsystem.cpp.o -c /builddir/build/BUILD/espresso/mpich/src/python/espressomd/cellsystem.cpp [ 75%] Linking CXX shared library cellsystem.so cd /builddir/build/BUILD/espresso/mpich/src/python/espressomd && /usr/bin/cmake -E cmake_link_script CMakeFiles/espressomd_cellsystem.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -Wl,--as-needed -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,-rpath,/usr/lib64/python3.9/site-packages/mpich/espressomd -shared -Wl,-soname,cellsystem.so -o cellsystem.so CMakeFiles/espressomd_cellsystem.dir/cellsystem.cpp.o ../../script_interface/EspressoScriptInterface.so ../../core/shapes/Shapes.so ../../core/cluster_analysis/core_cluster_analysis.so ../../core/io/mpiio/mpiio.so ../../core/io/reader/pdbreader.so ../../core/EspressoCore.so ../../config/EspressoConfig.so /usr/lib64/mpich/lib/libboost_mpi.so /usr/lib64/libboost_serialization.so ../../pdbparser/pdbparser.so /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so -Wl,-rpath-link,/builddir/build/BUILD/espresso/mpich/src/core/io/writer:/usr/lib64/mpich/lib make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 75%] Built target espressomd_cellsystem /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_electrostatics.dir/build.make src/python/espressomd/CMakeFiles/espressomd_electrostatics.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' [ 75%] Generating electrostatics.cpp cd /builddir/build/BUILD/espresso/mpich/src/python && /usr/bin/cython -3 --cplus --directive embedsignature=True --directive binding=True -I /builddir/build/BUILD/espresso/src/python/espressomd -I /builddir/build/BUILD/espresso/mpich/src/python/espressomd /builddir/build/BUILD/espresso/src/python/espressomd/electrostatics.pyx -o /builddir/build/BUILD/espresso/mpich/src/python/espressomd/electrostatics.cpp cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/espressomd /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/python/espressomd /builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_electrostatics.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_electrostatics.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_electrostatics.dir/depend.internal". Dependee "/builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_electrostatics.dir/depend.internal". Scanning dependencies of target espressomd_electrostatics make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_electrostatics.dir/build.make src/python/espressomd/CMakeFiles/espressomd_electrostatics.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' [ 76%] Building CXX object src/python/espressomd/CMakeFiles/espressomd_electrostatics.dir/electrostatics.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/python/espressomd && /usr/bin/g++ -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -Despressomd_electrostatics_EXPORTS -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/script_interface -I/builddir/build/BUILD/espresso/src/core/io/mpiio -I/builddir/build/BUILD/espresso/src/core/io/reader -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/python3.9 -isystem /usr/lib64/python3.9/site-packages/numpy/core/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -Wno-pedantic -Wno-cpp -Wno-strict-aliasing -Wno-maybe-uninitialized -Wno-unused-variable -o CMakeFiles/espressomd_electrostatics.dir/electrostatics.cpp.o -c /builddir/build/BUILD/espresso/mpich/src/python/espressomd/electrostatics.cpp [ 76%] Linking CXX shared library electrostatics.so cd /builddir/build/BUILD/espresso/mpich/src/python/espressomd && /usr/bin/cmake -E cmake_link_script CMakeFiles/espressomd_electrostatics.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -Wl,--as-needed -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,-rpath,/usr/lib64/python3.9/site-packages/mpich/espressomd -shared -Wl,-soname,electrostatics.so -o electrostatics.so CMakeFiles/espressomd_electrostatics.dir/electrostatics.cpp.o ../../script_interface/EspressoScriptInterface.so ../../core/shapes/Shapes.so ../../core/cluster_analysis/core_cluster_analysis.so ../../core/io/mpiio/mpiio.so ../../core/io/reader/pdbreader.so ../../core/EspressoCore.so ../../config/EspressoConfig.so /usr/lib64/mpich/lib/libboost_mpi.so /usr/lib64/libboost_serialization.so ../../pdbparser/pdbparser.so /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so -Wl,-rpath-link,/builddir/build/BUILD/espresso/mpich/src/core/io/writer:/usr/lib64/mpich/lib make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 76%] Built target espressomd_electrostatics /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_diamond.dir/build.make src/python/espressomd/CMakeFiles/espressomd_diamond.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' [ 76%] Generating diamond.cpp cd /builddir/build/BUILD/espresso/mpich/src/python && /usr/bin/cython -3 --cplus --directive embedsignature=True --directive binding=True -I /builddir/build/BUILD/espresso/src/python/espressomd -I /builddir/build/BUILD/espresso/mpich/src/python/espressomd /builddir/build/BUILD/espresso/src/python/espressomd/diamond.pyx -o /builddir/build/BUILD/espresso/mpich/src/python/espressomd/diamond.cpp cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/espressomd /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/python/espressomd /builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_diamond.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_diamond.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_diamond.dir/depend.internal". Dependee "/builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_diamond.dir/depend.internal". Scanning dependencies of target espressomd_diamond make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_diamond.dir/build.make src/python/espressomd/CMakeFiles/espressomd_diamond.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' [ 76%] Building CXX object src/python/espressomd/CMakeFiles/espressomd_diamond.dir/diamond.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/python/espressomd && /usr/bin/g++ -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -Despressomd_diamond_EXPORTS -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/script_interface -I/builddir/build/BUILD/espresso/src/core/io/mpiio -I/builddir/build/BUILD/espresso/src/core/io/reader -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/python3.9 -isystem /usr/lib64/python3.9/site-packages/numpy/core/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -Wno-pedantic -Wno-cpp -Wno-strict-aliasing -Wno-maybe-uninitialized -Wno-unused-variable -o CMakeFiles/espressomd_diamond.dir/diamond.cpp.o -c /builddir/build/BUILD/espresso/mpich/src/python/espressomd/diamond.cpp [ 76%] Linking CXX shared library diamond.so cd /builddir/build/BUILD/espresso/mpich/src/python/espressomd && /usr/bin/cmake -E cmake_link_script CMakeFiles/espressomd_diamond.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -Wl,--as-needed -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,-rpath,/usr/lib64/python3.9/site-packages/mpich/espressomd -shared -Wl,-soname,diamond.so -o diamond.so CMakeFiles/espressomd_diamond.dir/diamond.cpp.o ../../script_interface/EspressoScriptInterface.so ../../core/shapes/Shapes.so ../../core/cluster_analysis/core_cluster_analysis.so ../../core/io/mpiio/mpiio.so ../../core/io/reader/pdbreader.so ../../core/EspressoCore.so ../../config/EspressoConfig.so /usr/lib64/mpich/lib/libboost_mpi.so /usr/lib64/libboost_serialization.so ../../pdbparser/pdbparser.so /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so -Wl,-rpath-link,/builddir/build/BUILD/espresso/mpich/src/core/io/writer:/usr/lib64/mpich/lib make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 76%] Built target espressomd_diamond /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_cuda_init.dir/build.make src/python/espressomd/CMakeFiles/espressomd_cuda_init.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' [ 76%] Generating cuda_init.cpp cd /builddir/build/BUILD/espresso/mpich/src/python && /usr/bin/cython -3 --cplus --directive embedsignature=True --directive binding=True -I /builddir/build/BUILD/espresso/src/python/espressomd -I /builddir/build/BUILD/espresso/mpich/src/python/espressomd /builddir/build/BUILD/espresso/src/python/espressomd/cuda_init.pyx -o /builddir/build/BUILD/espresso/mpich/src/python/espressomd/cuda_init.cpp cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/espressomd /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/python/espressomd /builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_cuda_init.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_cuda_init.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_cuda_init.dir/depend.internal". Dependee "/builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_cuda_init.dir/depend.internal". Scanning dependencies of target espressomd_cuda_init make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_cuda_init.dir/build.make src/python/espressomd/CMakeFiles/espressomd_cuda_init.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' [ 76%] Building CXX object src/python/espressomd/CMakeFiles/espressomd_cuda_init.dir/cuda_init.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/python/espressomd && /usr/bin/g++ -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -Despressomd_cuda_init_EXPORTS -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/script_interface -I/builddir/build/BUILD/espresso/src/core/io/mpiio -I/builddir/build/BUILD/espresso/src/core/io/reader -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/python3.9 -isystem /usr/lib64/python3.9/site-packages/numpy/core/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -Wno-pedantic -Wno-cpp -Wno-strict-aliasing -Wno-maybe-uninitialized -Wno-unused-variable -o CMakeFiles/espressomd_cuda_init.dir/cuda_init.cpp.o -c /builddir/build/BUILD/espresso/mpich/src/python/espressomd/cuda_init.cpp [ 78%] Linking CXX shared library cuda_init.so cd /builddir/build/BUILD/espresso/mpich/src/python/espressomd && /usr/bin/cmake -E cmake_link_script CMakeFiles/espressomd_cuda_init.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -Wl,--as-needed -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,-rpath,/usr/lib64/python3.9/site-packages/mpich/espressomd -shared -Wl,-soname,cuda_init.so -o cuda_init.so CMakeFiles/espressomd_cuda_init.dir/cuda_init.cpp.o ../../script_interface/EspressoScriptInterface.so ../../core/shapes/Shapes.so ../../core/cluster_analysis/core_cluster_analysis.so ../../core/io/mpiio/mpiio.so ../../core/io/reader/pdbreader.so ../../core/EspressoCore.so ../../config/EspressoConfig.so /usr/lib64/mpich/lib/libboost_mpi.so /usr/lib64/libboost_serialization.so ../../pdbparser/pdbparser.so /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so -Wl,-rpath-link,/builddir/build/BUILD/espresso/mpich/src/core/io/writer:/usr/lib64/mpich/lib make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 78%] Built target espressomd_cuda_init /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_integrate.dir/build.make src/python/espressomd/CMakeFiles/espressomd_integrate.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' [ 79%] Generating integrate.cpp cd /builddir/build/BUILD/espresso/mpich/src/python && /usr/bin/cython -3 --cplus --directive embedsignature=True --directive binding=True -I /builddir/build/BUILD/espresso/src/python/espressomd -I /builddir/build/BUILD/espresso/mpich/src/python/espressomd /builddir/build/BUILD/espresso/src/python/espressomd/integrate.pyx -o /builddir/build/BUILD/espresso/mpich/src/python/espressomd/integrate.cpp cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/espressomd /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/python/espressomd /builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_integrate.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_integrate.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_integrate.dir/depend.internal". Dependee "/builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_integrate.dir/depend.internal". Scanning dependencies of target espressomd_integrate make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_integrate.dir/build.make src/python/espressomd/CMakeFiles/espressomd_integrate.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' [ 79%] Building CXX object src/python/espressomd/CMakeFiles/espressomd_integrate.dir/integrate.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/python/espressomd && /usr/bin/g++ -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -Despressomd_integrate_EXPORTS -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/script_interface -I/builddir/build/BUILD/espresso/src/core/io/mpiio -I/builddir/build/BUILD/espresso/src/core/io/reader -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/python3.9 -isystem /usr/lib64/python3.9/site-packages/numpy/core/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -Wno-pedantic -Wno-cpp -Wno-strict-aliasing -Wno-maybe-uninitialized -Wno-unused-variable -o CMakeFiles/espressomd_integrate.dir/integrate.cpp.o -c /builddir/build/BUILD/espresso/mpich/src/python/espressomd/integrate.cpp [ 79%] Linking CXX shared library integrate.so cd /builddir/build/BUILD/espresso/mpich/src/python/espressomd && /usr/bin/cmake -E cmake_link_script CMakeFiles/espressomd_integrate.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -Wl,--as-needed -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,-rpath,/usr/lib64/python3.9/site-packages/mpich/espressomd -shared -Wl,-soname,integrate.so -o integrate.so CMakeFiles/espressomd_integrate.dir/integrate.cpp.o ../../script_interface/EspressoScriptInterface.so ../../core/shapes/Shapes.so ../../core/cluster_analysis/core_cluster_analysis.so ../../core/io/mpiio/mpiio.so ../../core/io/reader/pdbreader.so ../../core/EspressoCore.so ../../config/EspressoConfig.so /usr/lib64/mpich/lib/libboost_mpi.so /usr/lib64/libboost_serialization.so ../../pdbparser/pdbparser.so /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so -Wl,-rpath-link,/builddir/build/BUILD/espresso/mpich/src/core/io/writer:/usr/lib64/mpich/lib make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 79%] Built target espressomd_integrate /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_actors.dir/build.make src/python/espressomd/CMakeFiles/espressomd_actors.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' [ 81%] Generating actors.cpp cd /builddir/build/BUILD/espresso/mpich/src/python && /usr/bin/cython -3 --cplus --directive embedsignature=True --directive binding=True -I /builddir/build/BUILD/espresso/src/python/espressomd -I /builddir/build/BUILD/espresso/mpich/src/python/espressomd /builddir/build/BUILD/espresso/src/python/espressomd/actors.pyx -o /builddir/build/BUILD/espresso/mpich/src/python/espressomd/actors.cpp cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/espressomd /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/python/espressomd /builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_actors.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_actors.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_actors.dir/depend.internal". Dependee "/builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_actors.dir/depend.internal". Scanning dependencies of target espressomd_actors make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_actors.dir/build.make src/python/espressomd/CMakeFiles/espressomd_actors.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' [ 81%] Building CXX object src/python/espressomd/CMakeFiles/espressomd_actors.dir/actors.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/python/espressomd && /usr/bin/g++ -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -Despressomd_actors_EXPORTS -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/script_interface -I/builddir/build/BUILD/espresso/src/core/io/mpiio -I/builddir/build/BUILD/espresso/src/core/io/reader -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/python3.9 -isystem /usr/lib64/python3.9/site-packages/numpy/core/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -Wno-pedantic -Wno-cpp -Wno-strict-aliasing -Wno-maybe-uninitialized -Wno-unused-variable -o CMakeFiles/espressomd_actors.dir/actors.cpp.o -c /builddir/build/BUILD/espresso/mpich/src/python/espressomd/actors.cpp [ 81%] Linking CXX shared library actors.so cd /builddir/build/BUILD/espresso/mpich/src/python/espressomd && /usr/bin/cmake -E cmake_link_script CMakeFiles/espressomd_actors.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -Wl,--as-needed -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,-rpath,/usr/lib64/python3.9/site-packages/mpich/espressomd -shared -Wl,-soname,actors.so -o actors.so CMakeFiles/espressomd_actors.dir/actors.cpp.o ../../script_interface/EspressoScriptInterface.so ../../core/shapes/Shapes.so ../../core/cluster_analysis/core_cluster_analysis.so ../../core/io/mpiio/mpiio.so ../../core/io/reader/pdbreader.so ../../core/EspressoCore.so ../../config/EspressoConfig.so /usr/lib64/mpich/lib/libboost_mpi.so /usr/lib64/libboost_serialization.so ../../pdbparser/pdbparser.so /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so -Wl,-rpath-link,/builddir/build/BUILD/espresso/mpich/src/core/io/writer:/usr/lib64/mpich/lib make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 81%] Built target espressomd_actors /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd__init.dir/build.make src/python/espressomd/CMakeFiles/espressomd__init.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' [ 81%] Generating _init.cpp cd /builddir/build/BUILD/espresso/mpich/src/python && /usr/bin/cython -3 --cplus --directive embedsignature=True --directive binding=True -I /builddir/build/BUILD/espresso/src/python/espressomd -I /builddir/build/BUILD/espresso/mpich/src/python/espressomd /builddir/build/BUILD/espresso/src/python/espressomd/_init.pyx -o /builddir/build/BUILD/espresso/mpich/src/python/espressomd/_init.cpp cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/espressomd /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/python/espressomd /builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd__init.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd__init.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd__init.dir/depend.internal". Dependee "/builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd__init.dir/depend.internal". Scanning dependencies of target espressomd__init make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd__init.dir/build.make src/python/espressomd/CMakeFiles/espressomd__init.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' [ 81%] Building CXX object src/python/espressomd/CMakeFiles/espressomd__init.dir/_init.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/python/espressomd && /usr/bin/g++ -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -Despressomd__init_EXPORTS -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/script_interface -I/builddir/build/BUILD/espresso/src/core/io/mpiio -I/builddir/build/BUILD/espresso/src/core/io/reader -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/python3.9 -isystem /usr/lib64/python3.9/site-packages/numpy/core/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -Wno-pedantic -Wno-cpp -Wno-strict-aliasing -Wno-maybe-uninitialized -Wno-unused-variable -o CMakeFiles/espressomd__init.dir/_init.cpp.o -c /builddir/build/BUILD/espresso/mpich/src/python/espressomd/_init.cpp [ 81%] Linking CXX shared library _init.so cd /builddir/build/BUILD/espresso/mpich/src/python/espressomd && /usr/bin/cmake -E cmake_link_script CMakeFiles/espressomd__init.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -Wl,--as-needed -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,-rpath,/usr/lib64/python3.9/site-packages/mpich/espressomd -shared -Wl,-soname,_init.so -o _init.so CMakeFiles/espressomd__init.dir/_init.cpp.o ../../script_interface/EspressoScriptInterface.so ../../core/shapes/Shapes.so ../../core/cluster_analysis/core_cluster_analysis.so ../../core/io/mpiio/mpiio.so ../../core/io/reader/pdbreader.so ../../core/EspressoCore.so ../../config/EspressoConfig.so /usr/lib64/mpich/lib/libboost_mpi.so /usr/lib64/libboost_serialization.so ../../pdbparser/pdbparser.so /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so -Wl,-rpath-link,/builddir/build/BUILD/espresso/mpich/src/core/io/writer:/usr/lib64/mpich/lib make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 81%] Built target espressomd__init /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_polymer.dir/build.make src/python/espressomd/CMakeFiles/espressomd_polymer.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' [ 81%] Generating polymer.cpp cd /builddir/build/BUILD/espresso/mpich/src/python && /usr/bin/cython -3 --cplus --directive embedsignature=True --directive binding=True -I /builddir/build/BUILD/espresso/src/python/espressomd -I /builddir/build/BUILD/espresso/mpich/src/python/espressomd /builddir/build/BUILD/espresso/src/python/espressomd/polymer.pyx -o /builddir/build/BUILD/espresso/mpich/src/python/espressomd/polymer.cpp cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/espressomd /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/python/espressomd /builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_polymer.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_polymer.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_polymer.dir/depend.internal". Dependee "/builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_polymer.dir/depend.internal". Scanning dependencies of target espressomd_polymer make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_polymer.dir/build.make src/python/espressomd/CMakeFiles/espressomd_polymer.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' [ 81%] Building CXX object src/python/espressomd/CMakeFiles/espressomd_polymer.dir/polymer.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/python/espressomd && /usr/bin/g++ -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -Despressomd_polymer_EXPORTS -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/script_interface -I/builddir/build/BUILD/espresso/src/core/io/mpiio -I/builddir/build/BUILD/espresso/src/core/io/reader -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/python3.9 -isystem /usr/lib64/python3.9/site-packages/numpy/core/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -Wno-pedantic -Wno-cpp -Wno-strict-aliasing -Wno-maybe-uninitialized -Wno-unused-variable -o CMakeFiles/espressomd_polymer.dir/polymer.cpp.o -c /builddir/build/BUILD/espresso/mpich/src/python/espressomd/polymer.cpp [ 81%] Linking CXX shared library polymer.so cd /builddir/build/BUILD/espresso/mpich/src/python/espressomd && /usr/bin/cmake -E cmake_link_script CMakeFiles/espressomd_polymer.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -Wl,--as-needed -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,-rpath,/usr/lib64/python3.9/site-packages/mpich/espressomd -shared -Wl,-soname,polymer.so -o polymer.so CMakeFiles/espressomd_polymer.dir/polymer.cpp.o ../../script_interface/EspressoScriptInterface.so ../../core/shapes/Shapes.so ../../core/cluster_analysis/core_cluster_analysis.so ../../core/io/mpiio/mpiio.so ../../core/io/reader/pdbreader.so ../../core/EspressoCore.so ../../config/EspressoConfig.so /usr/lib64/mpich/lib/libboost_mpi.so /usr/lib64/libboost_serialization.so ../../pdbparser/pdbparser.so /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so -Wl,-rpath-link,/builddir/build/BUILD/espresso/mpich/src/core/io/writer:/usr/lib64/mpich/lib make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 82%] Built target espressomd_polymer /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_galilei.dir/build.make src/python/espressomd/CMakeFiles/espressomd_galilei.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' [ 82%] Generating galilei.cpp cd /builddir/build/BUILD/espresso/mpich/src/python && /usr/bin/cython -3 --cplus --directive embedsignature=True --directive binding=True -I /builddir/build/BUILD/espresso/src/python/espressomd -I /builddir/build/BUILD/espresso/mpich/src/python/espressomd /builddir/build/BUILD/espresso/src/python/espressomd/galilei.pyx -o /builddir/build/BUILD/espresso/mpich/src/python/espressomd/galilei.cpp cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/espressomd /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/python/espressomd /builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_galilei.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_galilei.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_galilei.dir/depend.internal". Dependee "/builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_galilei.dir/depend.internal". Scanning dependencies of target espressomd_galilei make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_galilei.dir/build.make src/python/espressomd/CMakeFiles/espressomd_galilei.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' [ 82%] Building CXX object src/python/espressomd/CMakeFiles/espressomd_galilei.dir/galilei.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/python/espressomd && /usr/bin/g++ -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -Despressomd_galilei_EXPORTS -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/script_interface -I/builddir/build/BUILD/espresso/src/core/io/mpiio -I/builddir/build/BUILD/espresso/src/core/io/reader -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/python3.9 -isystem /usr/lib64/python3.9/site-packages/numpy/core/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -Wno-pedantic -Wno-cpp -Wno-strict-aliasing -Wno-maybe-uninitialized -Wno-unused-variable -o CMakeFiles/espressomd_galilei.dir/galilei.cpp.o -c /builddir/build/BUILD/espresso/mpich/src/python/espressomd/galilei.cpp [ 84%] Linking CXX shared library galilei.so cd /builddir/build/BUILD/espresso/mpich/src/python/espressomd && /usr/bin/cmake -E cmake_link_script CMakeFiles/espressomd_galilei.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -Wl,--as-needed -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,-rpath,/usr/lib64/python3.9/site-packages/mpich/espressomd -shared -Wl,-soname,galilei.so -o galilei.so CMakeFiles/espressomd_galilei.dir/galilei.cpp.o ../../script_interface/EspressoScriptInterface.so ../../core/shapes/Shapes.so ../../core/cluster_analysis/core_cluster_analysis.so ../../core/io/mpiio/mpiio.so ../../core/io/reader/pdbreader.so ../../core/EspressoCore.so ../../config/EspressoConfig.so /usr/lib64/mpich/lib/libboost_mpi.so /usr/lib64/libboost_serialization.so ../../pdbparser/pdbparser.so /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so -Wl,-rpath-link,/builddir/build/BUILD/espresso/mpich/src/core/io/writer:/usr/lib64/mpich/lib make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 84%] Built target espressomd_galilei /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_reaction_ensemble.dir/build.make src/python/espressomd/CMakeFiles/espressomd_reaction_ensemble.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' [ 84%] Generating reaction_ensemble.cpp cd /builddir/build/BUILD/espresso/mpich/src/python && /usr/bin/cython -3 --cplus --directive embedsignature=True --directive binding=True -I /builddir/build/BUILD/espresso/src/python/espressomd -I /builddir/build/BUILD/espresso/mpich/src/python/espressomd /builddir/build/BUILD/espresso/src/python/espressomd/reaction_ensemble.pyx -o /builddir/build/BUILD/espresso/mpich/src/python/espressomd/reaction_ensemble.cpp cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/espressomd /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/python/espressomd /builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_reaction_ensemble.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_reaction_ensemble.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_reaction_ensemble.dir/depend.internal". Dependee "/builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_reaction_ensemble.dir/depend.internal". Scanning dependencies of target espressomd_reaction_ensemble make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_reaction_ensemble.dir/build.make src/python/espressomd/CMakeFiles/espressomd_reaction_ensemble.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' [ 84%] Building CXX object src/python/espressomd/CMakeFiles/espressomd_reaction_ensemble.dir/reaction_ensemble.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/python/espressomd && /usr/bin/g++ -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -Despressomd_reaction_ensemble_EXPORTS -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/script_interface -I/builddir/build/BUILD/espresso/src/core/io/mpiio -I/builddir/build/BUILD/espresso/src/core/io/reader -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/python3.9 -isystem /usr/lib64/python3.9/site-packages/numpy/core/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -Wno-pedantic -Wno-cpp -Wno-strict-aliasing -Wno-maybe-uninitialized -Wno-unused-variable -o CMakeFiles/espressomd_reaction_ensemble.dir/reaction_ensemble.cpp.o -c /builddir/build/BUILD/espresso/mpich/src/python/espressomd/reaction_ensemble.cpp [ 85%] Linking CXX shared library reaction_ensemble.so cd /builddir/build/BUILD/espresso/mpich/src/python/espressomd && /usr/bin/cmake -E cmake_link_script CMakeFiles/espressomd_reaction_ensemble.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -Wl,--as-needed -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,-rpath,/usr/lib64/python3.9/site-packages/mpich/espressomd -shared -Wl,-soname,reaction_ensemble.so -o reaction_ensemble.so CMakeFiles/espressomd_reaction_ensemble.dir/reaction_ensemble.cpp.o ../../script_interface/EspressoScriptInterface.so ../../core/shapes/Shapes.so ../../core/cluster_analysis/core_cluster_analysis.so ../../core/io/mpiio/mpiio.so ../../core/io/reader/pdbreader.so ../../core/EspressoCore.so ../../config/EspressoConfig.so /usr/lib64/mpich/lib/libboost_mpi.so /usr/lib64/libboost_serialization.so ../../pdbparser/pdbparser.so /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so -Wl,-rpath-link,/builddir/build/BUILD/espresso/mpich/src/core/io/writer:/usr/lib64/mpich/lib make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 85%] Built target espressomd_reaction_ensemble /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_analyze.dir/build.make src/python/espressomd/CMakeFiles/espressomd_analyze.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' [ 85%] Generating analyze.cpp cd /builddir/build/BUILD/espresso/mpich/src/python && /usr/bin/cython -3 --cplus --directive embedsignature=True --directive binding=True -I /builddir/build/BUILD/espresso/src/python/espressomd -I /builddir/build/BUILD/espresso/mpich/src/python/espressomd /builddir/build/BUILD/espresso/src/python/espressomd/analyze.pyx -o /builddir/build/BUILD/espresso/mpich/src/python/espressomd/analyze.cpp cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/espressomd /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/python/espressomd /builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_analyze.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_analyze.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_analyze.dir/depend.internal". Dependee "/builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_analyze.dir/depend.internal". Scanning dependencies of target espressomd_analyze make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_analyze.dir/build.make src/python/espressomd/CMakeFiles/espressomd_analyze.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' [ 85%] Building CXX object src/python/espressomd/CMakeFiles/espressomd_analyze.dir/analyze.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/python/espressomd && /usr/bin/g++ -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -Despressomd_analyze_EXPORTS -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/script_interface -I/builddir/build/BUILD/espresso/src/core/io/mpiio -I/builddir/build/BUILD/espresso/src/core/io/reader -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/python3.9 -isystem /usr/lib64/python3.9/site-packages/numpy/core/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -Wno-pedantic -Wno-cpp -Wno-strict-aliasing -Wno-maybe-uninitialized -Wno-unused-variable -o CMakeFiles/espressomd_analyze.dir/analyze.cpp.o -c /builddir/build/BUILD/espresso/mpich/src/python/espressomd/analyze.cpp [ 85%] Linking CXX shared library analyze.so cd /builddir/build/BUILD/espresso/mpich/src/python/espressomd && /usr/bin/cmake -E cmake_link_script CMakeFiles/espressomd_analyze.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -Wl,--as-needed -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,-rpath,/usr/lib64/python3.9/site-packages/mpich/espressomd -shared -Wl,-soname,analyze.so -o analyze.so CMakeFiles/espressomd_analyze.dir/analyze.cpp.o ../../script_interface/EspressoScriptInterface.so ../../core/shapes/Shapes.so ../../core/cluster_analysis/core_cluster_analysis.so ../../core/io/mpiio/mpiio.so ../../core/io/reader/pdbreader.so ../../core/EspressoCore.so ../../config/EspressoConfig.so /usr/lib64/mpich/lib/libboost_mpi.so /usr/lib64/libboost_serialization.so ../../pdbparser/pdbparser.so /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so -Wl,-rpath-link,/builddir/build/BUILD/espresso/mpich/src/core/io/writer:/usr/lib64/mpich/lib make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 87%] Built target espressomd_analyze /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_particle_data.dir/build.make src/python/espressomd/CMakeFiles/espressomd_particle_data.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' [ 89%] Generating particle_data.cpp cd /builddir/build/BUILD/espresso/mpich/src/python && /usr/bin/cython -3 --cplus --directive embedsignature=True --directive binding=True -I /builddir/build/BUILD/espresso/src/python/espressomd -I /builddir/build/BUILD/espresso/mpich/src/python/espressomd /builddir/build/BUILD/espresso/src/python/espressomd/particle_data.pyx -o /builddir/build/BUILD/espresso/mpich/src/python/espressomd/particle_data.cpp cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/espressomd /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/python/espressomd /builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_particle_data.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_particle_data.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_particle_data.dir/depend.internal". Dependee "/builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_particle_data.dir/depend.internal". Scanning dependencies of target espressomd_particle_data make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_particle_data.dir/build.make src/python/espressomd/CMakeFiles/espressomd_particle_data.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' [ 89%] Building CXX object src/python/espressomd/CMakeFiles/espressomd_particle_data.dir/particle_data.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/python/espressomd && /usr/bin/g++ -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -Despressomd_particle_data_EXPORTS -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/script_interface -I/builddir/build/BUILD/espresso/src/core/io/mpiio -I/builddir/build/BUILD/espresso/src/core/io/reader -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/python3.9 -isystem /usr/lib64/python3.9/site-packages/numpy/core/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -Wno-pedantic -Wno-cpp -Wno-strict-aliasing -Wno-maybe-uninitialized -Wno-unused-variable -o CMakeFiles/espressomd_particle_data.dir/particle_data.cpp.o -c /builddir/build/BUILD/espresso/mpich/src/python/espressomd/particle_data.cpp [ 89%] Linking CXX shared library particle_data.so cd /builddir/build/BUILD/espresso/mpich/src/python/espressomd && /usr/bin/cmake -E cmake_link_script CMakeFiles/espressomd_particle_data.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -Wl,--as-needed -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,-rpath,/usr/lib64/python3.9/site-packages/mpich/espressomd -shared -Wl,-soname,particle_data.so -o particle_data.so CMakeFiles/espressomd_particle_data.dir/particle_data.cpp.o ../../script_interface/EspressoScriptInterface.so ../../core/shapes/Shapes.so ../../core/cluster_analysis/core_cluster_analysis.so ../../core/io/mpiio/mpiio.so ../../core/io/reader/pdbreader.so ../../core/EspressoCore.so ../../config/EspressoConfig.so /usr/lib64/mpich/lib/libboost_mpi.so /usr/lib64/libboost_serialization.so ../../pdbparser/pdbparser.so /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so -Wl,-rpath-link,/builddir/build/BUILD/espresso/mpich/src/core/io/writer:/usr/lib64/mpich/lib make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 89%] Built target espressomd_particle_data /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_collision_detection.dir/build.make src/python/espressomd/CMakeFiles/espressomd_collision_detection.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' [ 89%] Generating collision_detection.cpp cd /builddir/build/BUILD/espresso/mpich/src/python && /usr/bin/cython -3 --cplus --directive embedsignature=True --directive binding=True -I /builddir/build/BUILD/espresso/src/python/espressomd -I /builddir/build/BUILD/espresso/mpich/src/python/espressomd /builddir/build/BUILD/espresso/src/python/espressomd/collision_detection.pyx -o /builddir/build/BUILD/espresso/mpich/src/python/espressomd/collision_detection.cpp cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/espressomd /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/python/espressomd /builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_collision_detection.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_collision_detection.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_collision_detection.dir/depend.internal". Dependee "/builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_collision_detection.dir/depend.internal". Scanning dependencies of target espressomd_collision_detection make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_collision_detection.dir/build.make src/python/espressomd/CMakeFiles/espressomd_collision_detection.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' [ 89%] Building CXX object src/python/espressomd/CMakeFiles/espressomd_collision_detection.dir/collision_detection.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/python/espressomd && /usr/bin/g++ -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -Despressomd_collision_detection_EXPORTS -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/script_interface -I/builddir/build/BUILD/espresso/src/core/io/mpiio -I/builddir/build/BUILD/espresso/src/core/io/reader -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/python3.9 -isystem /usr/lib64/python3.9/site-packages/numpy/core/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -Wno-pedantic -Wno-cpp -Wno-strict-aliasing -Wno-maybe-uninitialized -Wno-unused-variable -o CMakeFiles/espressomd_collision_detection.dir/collision_detection.cpp.o -c /builddir/build/BUILD/espresso/mpich/src/python/espressomd/collision_detection.cpp [ 90%] Linking CXX shared library collision_detection.so cd /builddir/build/BUILD/espresso/mpich/src/python/espressomd && /usr/bin/cmake -E cmake_link_script CMakeFiles/espressomd_collision_detection.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -Wl,--as-needed -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,-rpath,/usr/lib64/python3.9/site-packages/mpich/espressomd -shared -Wl,-soname,collision_detection.so -o collision_detection.so CMakeFiles/espressomd_collision_detection.dir/collision_detection.cpp.o ../../script_interface/EspressoScriptInterface.so ../../core/shapes/Shapes.so ../../core/cluster_analysis/core_cluster_analysis.so ../../core/io/mpiio/mpiio.so ../../core/io/reader/pdbreader.so ../../core/EspressoCore.so ../../config/EspressoConfig.so /usr/lib64/mpich/lib/libboost_mpi.so /usr/lib64/libboost_serialization.so ../../pdbparser/pdbparser.so /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so -Wl,-rpath-link,/builddir/build/BUILD/espresso/mpich/src/core/io/writer:/usr/lib64/mpich/lib make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 90%] Built target espressomd_collision_detection /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_script_interface.dir/build.make src/python/espressomd/CMakeFiles/espressomd_script_interface.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' [ 92%] Generating script_interface.cpp cd /builddir/build/BUILD/espresso/mpich/src/python && /usr/bin/cython -3 --cplus --directive embedsignature=True --directive binding=True -I /builddir/build/BUILD/espresso/src/python/espressomd -I /builddir/build/BUILD/espresso/mpich/src/python/espressomd /builddir/build/BUILD/espresso/src/python/espressomd/script_interface.pyx -o /builddir/build/BUILD/espresso/mpich/src/python/espressomd/script_interface.cpp cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/espressomd /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/python/espressomd /builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_script_interface.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_script_interface.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_script_interface.dir/depend.internal". Dependee "/builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_script_interface.dir/depend.internal". Scanning dependencies of target espressomd_script_interface make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_script_interface.dir/build.make src/python/espressomd/CMakeFiles/espressomd_script_interface.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' [ 92%] Building CXX object src/python/espressomd/CMakeFiles/espressomd_script_interface.dir/script_interface.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/python/espressomd && /usr/bin/g++ -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -Despressomd_script_interface_EXPORTS -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/script_interface -I/builddir/build/BUILD/espresso/src/core/io/mpiio -I/builddir/build/BUILD/espresso/src/core/io/reader -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/python3.9 -isystem /usr/lib64/python3.9/site-packages/numpy/core/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -Wno-pedantic -Wno-cpp -Wno-strict-aliasing -Wno-maybe-uninitialized -Wno-unused-variable -o CMakeFiles/espressomd_script_interface.dir/script_interface.cpp.o -c /builddir/build/BUILD/espresso/mpich/src/python/espressomd/script_interface.cpp [ 92%] Linking CXX shared library script_interface.so cd /builddir/build/BUILD/espresso/mpich/src/python/espressomd && /usr/bin/cmake -E cmake_link_script CMakeFiles/espressomd_script_interface.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -Wl,--as-needed -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,-rpath,/usr/lib64/python3.9/site-packages/mpich/espressomd -shared -Wl,-soname,script_interface.so -o script_interface.so CMakeFiles/espressomd_script_interface.dir/script_interface.cpp.o ../../script_interface/EspressoScriptInterface.so ../../core/shapes/Shapes.so ../../core/cluster_analysis/core_cluster_analysis.so ../../core/io/mpiio/mpiio.so ../../core/io/reader/pdbreader.so ../../core/EspressoCore.so ../../config/EspressoConfig.so /usr/lib64/mpich/lib/libboost_mpi.so /usr/lib64/libboost_serialization.so ../../pdbparser/pdbparser.so /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so -Wl,-rpath-link,/builddir/build/BUILD/espresso/mpich/src/core/io/writer:/usr/lib64/mpich/lib make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 92%] Built target espressomd_script_interface /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_globals.dir/build.make src/python/espressomd/CMakeFiles/espressomd_globals.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' [ 92%] Generating globals.cpp cd /builddir/build/BUILD/espresso/mpich/src/python && /usr/bin/cython -3 --cplus --directive embedsignature=True --directive binding=True -I /builddir/build/BUILD/espresso/src/python/espressomd -I /builddir/build/BUILD/espresso/mpich/src/python/espressomd /builddir/build/BUILD/espresso/src/python/espressomd/globals.pyx -o /builddir/build/BUILD/espresso/mpich/src/python/espressomd/globals.cpp cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/espressomd /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/python/espressomd /builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_globals.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_globals.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_globals.dir/depend.internal". Dependee "/builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_globals.dir/depend.internal". Scanning dependencies of target espressomd_globals make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_globals.dir/build.make src/python/espressomd/CMakeFiles/espressomd_globals.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' [ 92%] Building CXX object src/python/espressomd/CMakeFiles/espressomd_globals.dir/globals.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/python/espressomd && /usr/bin/g++ -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -Despressomd_globals_EXPORTS -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/script_interface -I/builddir/build/BUILD/espresso/src/core/io/mpiio -I/builddir/build/BUILD/espresso/src/core/io/reader -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/python3.9 -isystem /usr/lib64/python3.9/site-packages/numpy/core/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -Wno-pedantic -Wno-cpp -Wno-strict-aliasing -Wno-maybe-uninitialized -Wno-unused-variable -o CMakeFiles/espressomd_globals.dir/globals.cpp.o -c /builddir/build/BUILD/espresso/mpich/src/python/espressomd/globals.cpp [ 92%] Linking CXX shared library globals.so cd /builddir/build/BUILD/espresso/mpich/src/python/espressomd && /usr/bin/cmake -E cmake_link_script CMakeFiles/espressomd_globals.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -Wl,--as-needed -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,-rpath,/usr/lib64/python3.9/site-packages/mpich/espressomd -shared -Wl,-soname,globals.so -o globals.so CMakeFiles/espressomd_globals.dir/globals.cpp.o ../../script_interface/EspressoScriptInterface.so ../../core/shapes/Shapes.so ../../core/cluster_analysis/core_cluster_analysis.so ../../core/io/mpiio/mpiio.so ../../core/io/reader/pdbreader.so ../../core/EspressoCore.so ../../config/EspressoConfig.so /usr/lib64/mpich/lib/libboost_mpi.so /usr/lib64/libboost_serialization.so ../../pdbparser/pdbparser.so /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so -Wl,-rpath-link,/builddir/build/BUILD/espresso/mpich/src/core/io/writer:/usr/lib64/mpich/lib make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 92%] Built target espressomd_globals /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_magnetostatic_extensions.dir/build.make src/python/espressomd/CMakeFiles/espressomd_magnetostatic_extensions.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' [ 92%] Generating magnetostatic_extensions.cpp cd /builddir/build/BUILD/espresso/mpich/src/python && /usr/bin/cython -3 --cplus --directive embedsignature=True --directive binding=True -I /builddir/build/BUILD/espresso/src/python/espressomd -I /builddir/build/BUILD/espresso/mpich/src/python/espressomd /builddir/build/BUILD/espresso/src/python/espressomd/magnetostatic_extensions.pyx -o /builddir/build/BUILD/espresso/mpich/src/python/espressomd/magnetostatic_extensions.cpp cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/espressomd /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/python/espressomd /builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_magnetostatic_extensions.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_magnetostatic_extensions.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_magnetostatic_extensions.dir/depend.internal". Dependee "/builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_magnetostatic_extensions.dir/depend.internal". Scanning dependencies of target espressomd_magnetostatic_extensions make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_magnetostatic_extensions.dir/build.make src/python/espressomd/CMakeFiles/espressomd_magnetostatic_extensions.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' [ 92%] Building CXX object src/python/espressomd/CMakeFiles/espressomd_magnetostatic_extensions.dir/magnetostatic_extensions.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/python/espressomd && /usr/bin/g++ -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -Despressomd_magnetostatic_extensions_EXPORTS -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/script_interface -I/builddir/build/BUILD/espresso/src/core/io/mpiio -I/builddir/build/BUILD/espresso/src/core/io/reader -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/python3.9 -isystem /usr/lib64/python3.9/site-packages/numpy/core/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -Wno-pedantic -Wno-cpp -Wno-strict-aliasing -Wno-maybe-uninitialized -Wno-unused-variable -o CMakeFiles/espressomd_magnetostatic_extensions.dir/magnetostatic_extensions.cpp.o -c /builddir/build/BUILD/espresso/mpich/src/python/espressomd/magnetostatic_extensions.cpp [ 93%] Linking CXX shared library magnetostatic_extensions.so cd /builddir/build/BUILD/espresso/mpich/src/python/espressomd && /usr/bin/cmake -E cmake_link_script CMakeFiles/espressomd_magnetostatic_extensions.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -Wl,--as-needed -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,-rpath,/usr/lib64/python3.9/site-packages/mpich/espressomd -shared -Wl,-soname,magnetostatic_extensions.so -o magnetostatic_extensions.so CMakeFiles/espressomd_magnetostatic_extensions.dir/magnetostatic_extensions.cpp.o ../../script_interface/EspressoScriptInterface.so ../../core/shapes/Shapes.so ../../core/cluster_analysis/core_cluster_analysis.so ../../core/io/mpiio/mpiio.so ../../core/io/reader/pdbreader.so ../../core/EspressoCore.so ../../config/EspressoConfig.so /usr/lib64/mpich/lib/libboost_mpi.so /usr/lib64/libboost_serialization.so ../../pdbparser/pdbparser.so /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so -Wl,-rpath-link,/builddir/build/BUILD/espresso/mpich/src/core/io/writer:/usr/lib64/mpich/lib make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 93%] Built target espressomd_magnetostatic_extensions /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_interactions.dir/build.make src/python/espressomd/CMakeFiles/espressomd_interactions.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' [ 93%] Generating interactions.cpp cd /builddir/build/BUILD/espresso/mpich/src/python && /usr/bin/cython -3 --cplus --directive embedsignature=True --directive binding=True -I /builddir/build/BUILD/espresso/src/python/espressomd -I /builddir/build/BUILD/espresso/mpich/src/python/espressomd /builddir/build/BUILD/espresso/src/python/espressomd/interactions.pyx -o /builddir/build/BUILD/espresso/mpich/src/python/espressomd/interactions.cpp cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/espressomd /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/python/espressomd /builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_interactions.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_interactions.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_interactions.dir/depend.internal". Dependee "/builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_interactions.dir/depend.internal". Scanning dependencies of target espressomd_interactions make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_interactions.dir/build.make src/python/espressomd/CMakeFiles/espressomd_interactions.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' [ 93%] Building CXX object src/python/espressomd/CMakeFiles/espressomd_interactions.dir/interactions.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/python/espressomd && /usr/bin/g++ -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -Despressomd_interactions_EXPORTS -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/script_interface -I/builddir/build/BUILD/espresso/src/core/io/mpiio -I/builddir/build/BUILD/espresso/src/core/io/reader -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/python3.9 -isystem /usr/lib64/python3.9/site-packages/numpy/core/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -Wno-pedantic -Wno-cpp -Wno-strict-aliasing -Wno-maybe-uninitialized -Wno-unused-variable -o CMakeFiles/espressomd_interactions.dir/interactions.cpp.o -c /builddir/build/BUILD/espresso/mpich/src/python/espressomd/interactions.cpp [ 93%] Linking CXX shared library interactions.so cd /builddir/build/BUILD/espresso/mpich/src/python/espressomd && /usr/bin/cmake -E cmake_link_script CMakeFiles/espressomd_interactions.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -Wl,--as-needed -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,-rpath,/usr/lib64/python3.9/site-packages/mpich/espressomd -shared -Wl,-soname,interactions.so -o interactions.so CMakeFiles/espressomd_interactions.dir/interactions.cpp.o ../../script_interface/EspressoScriptInterface.so ../../core/shapes/Shapes.so ../../core/cluster_analysis/core_cluster_analysis.so ../../core/io/mpiio/mpiio.so ../../core/io/reader/pdbreader.so ../../core/EspressoCore.so ../../config/EspressoConfig.so /usr/lib64/mpich/lib/libboost_mpi.so /usr/lib64/libboost_serialization.so ../../pdbparser/pdbparser.so /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so -Wl,-rpath-link,/builddir/build/BUILD/espresso/mpich/src/core/io/writer:/usr/lib64/mpich/lib make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 95%] Built target espressomd_interactions /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_lb.dir/build.make src/python/espressomd/CMakeFiles/espressomd_lb.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' [ 95%] Generating lb.cpp cd /builddir/build/BUILD/espresso/mpich/src/python && /usr/bin/cython -3 --cplus --directive embedsignature=True --directive binding=True -I /builddir/build/BUILD/espresso/src/python/espressomd -I /builddir/build/BUILD/espresso/mpich/src/python/espressomd /builddir/build/BUILD/espresso/src/python/espressomd/lb.pyx -o /builddir/build/BUILD/espresso/mpich/src/python/espressomd/lb.cpp cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/espressomd /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/python/espressomd /builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_lb.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_lb.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_lb.dir/depend.internal". Dependee "/builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_lb.dir/depend.internal". Scanning dependencies of target espressomd_lb make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_lb.dir/build.make src/python/espressomd/CMakeFiles/espressomd_lb.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' [ 96%] Building CXX object src/python/espressomd/CMakeFiles/espressomd_lb.dir/lb.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/python/espressomd && /usr/bin/g++ -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -Despressomd_lb_EXPORTS -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/script_interface -I/builddir/build/BUILD/espresso/src/core/io/mpiio -I/builddir/build/BUILD/espresso/src/core/io/reader -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/python3.9 -isystem /usr/lib64/python3.9/site-packages/numpy/core/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -Wno-pedantic -Wno-cpp -Wno-strict-aliasing -Wno-maybe-uninitialized -Wno-unused-variable -o CMakeFiles/espressomd_lb.dir/lb.cpp.o -c /builddir/build/BUILD/espresso/mpich/src/python/espressomd/lb.cpp [ 96%] Linking CXX shared library lb.so cd /builddir/build/BUILD/espresso/mpich/src/python/espressomd && /usr/bin/cmake -E cmake_link_script CMakeFiles/espressomd_lb.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -Wl,--as-needed -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,-rpath,/usr/lib64/python3.9/site-packages/mpich/espressomd -shared -Wl,-soname,lb.so -o lb.so CMakeFiles/espressomd_lb.dir/lb.cpp.o ../../script_interface/EspressoScriptInterface.so ../../core/shapes/Shapes.so ../../core/cluster_analysis/core_cluster_analysis.so ../../core/io/mpiio/mpiio.so ../../core/io/reader/pdbreader.so ../../core/EspressoCore.so ../../config/EspressoConfig.so /usr/lib64/mpich/lib/libboost_mpi.so /usr/lib64/libboost_serialization.so ../../pdbparser/pdbparser.so /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so -Wl,-rpath-link,/builddir/build/BUILD/espresso/mpich/src/core/io/writer:/usr/lib64/mpich/lib make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 96%] Built target espressomd_lb /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_minimize_energy.dir/build.make src/python/espressomd/CMakeFiles/espressomd_minimize_energy.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' [ 96%] Generating minimize_energy.cpp cd /builddir/build/BUILD/espresso/mpich/src/python && /usr/bin/cython -3 --cplus --directive embedsignature=True --directive binding=True -I /builddir/build/BUILD/espresso/src/python/espressomd -I /builddir/build/BUILD/espresso/mpich/src/python/espressomd /builddir/build/BUILD/espresso/src/python/espressomd/minimize_energy.pyx -o /builddir/build/BUILD/espresso/mpich/src/python/espressomd/minimize_energy.cpp cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/espressomd /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/python/espressomd /builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_minimize_energy.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_minimize_energy.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_minimize_energy.dir/depend.internal". Dependee "/builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_minimize_energy.dir/depend.internal". Scanning dependencies of target espressomd_minimize_energy make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_minimize_energy.dir/build.make src/python/espressomd/CMakeFiles/espressomd_minimize_energy.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' [ 96%] Building CXX object src/python/espressomd/CMakeFiles/espressomd_minimize_energy.dir/minimize_energy.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/python/espressomd && /usr/bin/g++ -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -Despressomd_minimize_energy_EXPORTS -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/script_interface -I/builddir/build/BUILD/espresso/src/core/io/mpiio -I/builddir/build/BUILD/espresso/src/core/io/reader -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/python3.9 -isystem /usr/lib64/python3.9/site-packages/numpy/core/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -Wno-pedantic -Wno-cpp -Wno-strict-aliasing -Wno-maybe-uninitialized -Wno-unused-variable -o CMakeFiles/espressomd_minimize_energy.dir/minimize_energy.cpp.o -c /builddir/build/BUILD/espresso/mpich/src/python/espressomd/minimize_energy.cpp [ 96%] Linking CXX shared library minimize_energy.so cd /builddir/build/BUILD/espresso/mpich/src/python/espressomd && /usr/bin/cmake -E cmake_link_script CMakeFiles/espressomd_minimize_energy.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -Wl,--as-needed -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,-rpath,/usr/lib64/python3.9/site-packages/mpich/espressomd -shared -Wl,-soname,minimize_energy.so -o minimize_energy.so CMakeFiles/espressomd_minimize_energy.dir/minimize_energy.cpp.o ../../script_interface/EspressoScriptInterface.so ../../core/shapes/Shapes.so ../../core/cluster_analysis/core_cluster_analysis.so ../../core/io/mpiio/mpiio.so ../../core/io/reader/pdbreader.so ../../core/EspressoCore.so ../../config/EspressoConfig.so /usr/lib64/mpich/lib/libboost_mpi.so /usr/lib64/libboost_serialization.so ../../pdbparser/pdbparser.so /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so -Wl,-rpath-link,/builddir/build/BUILD/espresso/mpich/src/core/io/writer:/usr/lib64/mpich/lib make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 96%] Built target espressomd_minimize_energy /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_magnetostatics.dir/build.make src/python/espressomd/CMakeFiles/espressomd_magnetostatics.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' [ 96%] Generating magnetostatics.cpp cd /builddir/build/BUILD/espresso/mpich/src/python && /usr/bin/cython -3 --cplus --directive embedsignature=True --directive binding=True -I /builddir/build/BUILD/espresso/src/python/espressomd -I /builddir/build/BUILD/espresso/mpich/src/python/espressomd /builddir/build/BUILD/espresso/src/python/espressomd/magnetostatics.pyx -o /builddir/build/BUILD/espresso/mpich/src/python/espressomd/magnetostatics.cpp cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/espressomd /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/python/espressomd /builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_magnetostatics.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_magnetostatics.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_magnetostatics.dir/depend.internal". Dependee "/builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_magnetostatics.dir/depend.internal". Scanning dependencies of target espressomd_magnetostatics make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_magnetostatics.dir/build.make src/python/espressomd/CMakeFiles/espressomd_magnetostatics.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' [ 96%] Building CXX object src/python/espressomd/CMakeFiles/espressomd_magnetostatics.dir/magnetostatics.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/python/espressomd && /usr/bin/g++ -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -Despressomd_magnetostatics_EXPORTS -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/script_interface -I/builddir/build/BUILD/espresso/src/core/io/mpiio -I/builddir/build/BUILD/espresso/src/core/io/reader -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/python3.9 -isystem /usr/lib64/python3.9/site-packages/numpy/core/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -Wno-pedantic -Wno-cpp -Wno-strict-aliasing -Wno-maybe-uninitialized -Wno-unused-variable -o CMakeFiles/espressomd_magnetostatics.dir/magnetostatics.cpp.o -c /builddir/build/BUILD/espresso/mpich/src/python/espressomd/magnetostatics.cpp [ 98%] Linking CXX shared library magnetostatics.so cd /builddir/build/BUILD/espresso/mpich/src/python/espressomd && /usr/bin/cmake -E cmake_link_script CMakeFiles/espressomd_magnetostatics.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -Wl,--as-needed -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,-rpath,/usr/lib64/python3.9/site-packages/mpich/espressomd -shared -Wl,-soname,magnetostatics.so -o magnetostatics.so CMakeFiles/espressomd_magnetostatics.dir/magnetostatics.cpp.o ../../script_interface/EspressoScriptInterface.so ../../core/shapes/Shapes.so ../../core/cluster_analysis/core_cluster_analysis.so ../../core/io/mpiio/mpiio.so ../../core/io/reader/pdbreader.so ../../core/EspressoCore.so ../../config/EspressoConfig.so /usr/lib64/mpich/lib/libboost_mpi.so /usr/lib64/libboost_serialization.so ../../pdbparser/pdbparser.so /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so -Wl,-rpath-link,/builddir/build/BUILD/espresso/mpich/src/core/io/writer:/usr/lib64/mpich/lib make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 98%] Built target espressomd_magnetostatics /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_profiler.dir/build.make src/python/espressomd/CMakeFiles/espressomd_profiler.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' [ 98%] Generating profiler.cpp cd /builddir/build/BUILD/espresso/mpich/src/python && /usr/bin/cython -3 --cplus --directive embedsignature=True --directive binding=True -I /builddir/build/BUILD/espresso/src/python/espressomd -I /builddir/build/BUILD/espresso/mpich/src/python/espressomd /builddir/build/BUILD/espresso/src/python/espressomd/profiler.pyx -o /builddir/build/BUILD/espresso/mpich/src/python/espressomd/profiler.cpp cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/espressomd /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/python/espressomd /builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_profiler.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_profiler.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_profiler.dir/depend.internal". Dependee "/builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_profiler.dir/depend.internal". Scanning dependencies of target espressomd_profiler make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_profiler.dir/build.make src/python/espressomd/CMakeFiles/espressomd_profiler.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' [100%] Building CXX object src/python/espressomd/CMakeFiles/espressomd_profiler.dir/profiler.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/python/espressomd && /usr/bin/g++ -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -Despressomd_profiler_EXPORTS -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/script_interface -I/builddir/build/BUILD/espresso/src/core/io/mpiio -I/builddir/build/BUILD/espresso/src/core/io/reader -I/builddir/build/BUILD/espresso/src/pdbparser/include -I/builddir/build/BUILD/espresso/src/profiler/include -isystem /usr/include/python3.9 -isystem /usr/lib64/python3.9/site-packages/numpy/core/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -Wno-pedantic -Wno-cpp -Wno-strict-aliasing -Wno-maybe-uninitialized -Wno-unused-variable -o CMakeFiles/espressomd_profiler.dir/profiler.cpp.o -c /builddir/build/BUILD/espresso/mpich/src/python/espressomd/profiler.cpp [100%] Linking CXX shared library profiler.so cd /builddir/build/BUILD/espresso/mpich/src/python/espressomd && /usr/bin/cmake -E cmake_link_script CMakeFiles/espressomd_profiler.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -Wl,--as-needed -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,-rpath,/usr/lib64/python3.9/site-packages/mpich/espressomd -shared -Wl,-soname,profiler.so -o profiler.so CMakeFiles/espressomd_profiler.dir/profiler.cpp.o ../../script_interface/EspressoScriptInterface.so ../../core/shapes/Shapes.so ../../core/cluster_analysis/core_cluster_analysis.so ../../core/io/mpiio/mpiio.so ../../core/io/reader/pdbreader.so ../../core/EspressoCore.so ../../config/EspressoConfig.so /usr/lib64/mpich/lib/libboost_mpi.so /usr/lib64/libboost_serialization.so ../../pdbparser/pdbparser.so /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so -Wl,-rpath-link,/builddir/build/BUILD/espresso/mpich/src/core/io/writer:/usr/lib64/mpich/lib make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [100%] Built target espressomd_profiler /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_scafacos.dir/build.make src/python/espressomd/CMakeFiles/espressomd_scafacos.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' [100%] Generating scafacos.cpp cd /builddir/build/BUILD/espresso/mpich/src/python && /usr/bin/cython -3 --cplus --directive embedsignature=True --directive binding=True -I /builddir/build/BUILD/espresso/src/python/espressomd -I /builddir/build/BUILD/espresso/mpich/src/python/espressomd /builddir/build/BUILD/espresso/src/python/espressomd/scafacos.pyx -o /builddir/build/BUILD/espresso/mpich/src/python/espressomd/scafacos.cpp cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/espressomd /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/python/espressomd /builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_scafacos.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_scafacos.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_scafacos.dir/depend.internal". Dependee "/builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_scafacos.dir/depend.internal". Scanning dependencies of target espressomd_scafacos make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_scafacos.dir/build.make src/python/espressomd/CMakeFiles/espressomd_scafacos.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' [100%] Building CXX object src/python/espressomd/CMakeFiles/espressomd_scafacos.dir/scafacos.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/python/espressomd && /usr/bin/g++ -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -Despressomd_scafacos_EXPORTS -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/script_interface -I/builddir/build/BUILD/espresso/src/core/io/mpiio -I/builddir/build/BUILD/espresso/src/core/io/reader -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/python3.9 -isystem /usr/lib64/python3.9/site-packages/numpy/core/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -Wno-pedantic -Wno-cpp -Wno-strict-aliasing -Wno-maybe-uninitialized -Wno-unused-variable -o CMakeFiles/espressomd_scafacos.dir/scafacos.cpp.o -c /builddir/build/BUILD/espresso/mpich/src/python/espressomd/scafacos.cpp [100%] Linking CXX shared library scafacos.so cd /builddir/build/BUILD/espresso/mpich/src/python/espressomd && /usr/bin/cmake -E cmake_link_script CMakeFiles/espressomd_scafacos.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -Wl,--as-needed -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,-rpath,/usr/lib64/python3.9/site-packages/mpich/espressomd -shared -Wl,-soname,scafacos.so -o scafacos.so CMakeFiles/espressomd_scafacos.dir/scafacos.cpp.o ../../script_interface/EspressoScriptInterface.so ../../core/shapes/Shapes.so ../../core/cluster_analysis/core_cluster_analysis.so ../../core/io/mpiio/mpiio.so ../../core/io/reader/pdbreader.so ../../core/EspressoCore.so ../../config/EspressoConfig.so /usr/lib64/mpich/lib/libboost_mpi.so /usr/lib64/libboost_serialization.so ../../pdbparser/pdbparser.so /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so -Wl,-rpath-link,/builddir/build/BUILD/espresso/mpich/src/core/io/writer:/usr/lib64/mpich/lib make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [100%] Built target espressomd_scafacos /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd.dir/build.make src/python/espressomd/CMakeFiles/espressomd.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/espressomd /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/python/espressomd /builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd.dir/depend.internal". Dependee "/builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd.dir/depend.internal". Scanning dependencies of target espressomd make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd.dir/build.make src/python/espressomd/CMakeFiles/espressomd.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich/src/python/espressomd && /usr/bin/cmake -E copy /builddir/build/BUILD/espresso/src/python/espressomd/__cinit__.py /builddir/build/BUILD/espresso/mpich/src/python/espressomd//__cinit__.py cd /builddir/build/BUILD/espresso/mpich/src/python/espressomd && /usr/bin/cmake -E copy /builddir/build/BUILD/espresso/src/python/espressomd/__init__.py /builddir/build/BUILD/espresso/mpich/src/python/espressomd//__init__.py cd /builddir/build/BUILD/espresso/mpich/src/python/espressomd && /usr/bin/cmake -E copy /builddir/build/BUILD/espresso/src/python/espressomd/accumulators.py /builddir/build/BUILD/espresso/mpich/src/python/espressomd//accumulators.py cd /builddir/build/BUILD/espresso/mpich/src/python/espressomd && /usr/bin/cmake -E copy /builddir/build/BUILD/espresso/src/python/espressomd/checkpointing.py /builddir/build/BUILD/espresso/mpich/src/python/espressomd//checkpointing.py cd /builddir/build/BUILD/espresso/mpich/src/python/espressomd && /usr/bin/cmake -E copy /builddir/build/BUILD/espresso/src/python/espressomd/cluster_analysis.py /builddir/build/BUILD/espresso/mpich/src/python/espressomd//cluster_analysis.py cd /builddir/build/BUILD/espresso/mpich/src/python/espressomd && /usr/bin/cmake -E copy /builddir/build/BUILD/espresso/src/python/espressomd/comfixed.py /builddir/build/BUILD/espresso/mpich/src/python/espressomd//comfixed.py cd /builddir/build/BUILD/espresso/mpich/src/python/espressomd && /usr/bin/cmake -E copy /builddir/build/BUILD/espresso/src/python/espressomd/constraints.py /builddir/build/BUILD/espresso/mpich/src/python/espressomd//constraints.py cd /builddir/build/BUILD/espresso/mpich/src/python/espressomd && /usr/bin/cmake -E copy /builddir/build/BUILD/espresso/src/python/espressomd/drude_helpers.py /builddir/build/BUILD/espresso/mpich/src/python/espressomd//drude_helpers.py cd /builddir/build/BUILD/espresso/mpich/src/python/espressomd && /usr/bin/cmake -E copy /builddir/build/BUILD/espresso/src/python/espressomd/ekboundaries.py /builddir/build/BUILD/espresso/mpich/src/python/espressomd//ekboundaries.py cd /builddir/build/BUILD/espresso/mpich/src/python/espressomd && /usr/bin/cmake -E copy /builddir/build/BUILD/espresso/src/python/espressomd/gen_code_info.py /builddir/build/BUILD/espresso/mpich/src/python/espressomd//gen_code_info.py cd /builddir/build/BUILD/espresso/mpich/src/python/espressomd && /usr/bin/cmake -E copy /builddir/build/BUILD/espresso/src/python/espressomd/gen_pxiconfig.py /builddir/build/BUILD/espresso/mpich/src/python/espressomd//gen_pxiconfig.py cd /builddir/build/BUILD/espresso/mpich/src/python/espressomd && /usr/bin/cmake -E copy /builddir/build/BUILD/espresso/src/python/espressomd/highlander.py /builddir/build/BUILD/espresso/mpich/src/python/espressomd//highlander.py cd /builddir/build/BUILD/espresso/mpich/src/python/espressomd && /usr/bin/cmake -E copy /builddir/build/BUILD/espresso/src/python/espressomd/lbboundaries.py /builddir/build/BUILD/espresso/mpich/src/python/espressomd//lbboundaries.py cd /builddir/build/BUILD/espresso/mpich/src/python/espressomd && /usr/bin/cmake -E copy /builddir/build/BUILD/espresso/src/python/espressomd/observables.py /builddir/build/BUILD/espresso/mpich/src/python/espressomd//observables.py cd /builddir/build/BUILD/espresso/mpich/src/python/espressomd && /usr/bin/cmake -E copy /builddir/build/BUILD/espresso/src/python/espressomd/pair_criteria.py /builddir/build/BUILD/espresso/mpich/src/python/espressomd//pair_criteria.py cd /builddir/build/BUILD/espresso/mpich/src/python/espressomd && /usr/bin/cmake -E copy /builddir/build/BUILD/espresso/src/python/espressomd/shapes.py /builddir/build/BUILD/espresso/mpich/src/python/espressomd//shapes.py cd /builddir/build/BUILD/espresso/mpich/src/python/espressomd && /usr/bin/cmake -E copy /builddir/build/BUILD/espresso/src/python/espressomd/virtual_sites.py /builddir/build/BUILD/espresso/mpich/src/python/espressomd//virtual_sites.py cd /builddir/build/BUILD/espresso/mpich/src/python/espressomd && /usr/bin/cmake -E copy /builddir/build/BUILD/espresso/src/python/espressomd/io/__init__.py /builddir/build/BUILD/espresso/mpich/src/python/espressomd/io/__init__.py make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [100%] Built target espressomd /usr/bin/make -f src/python/CMakeFiles/pypresso.dir/build.make src/python/CMakeFiles/pypresso.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/python /builddir/build/BUILD/espresso/mpich/src/python/CMakeFiles/pypresso.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/espresso/mpich/src/python/CMakeFiles/pypresso.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/espresso/mpich/src/python/CMakeFiles/pypresso.dir/depend.internal". Dependee "/builddir/build/BUILD/espresso/mpich/src/python/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/espresso/mpich/src/python/CMakeFiles/pypresso.dir/depend.internal". Scanning dependencies of target pypresso make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' /usr/bin/make -f src/python/CMakeFiles/pypresso.dir/build.make src/python/CMakeFiles/pypresso.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' make[2]: Nothing to be done for 'src/python/CMakeFiles/pypresso.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [100%] Built target pypresso make[1]: Leaving directory '/builddir/build/BUILD/espresso/mpich' /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/espresso/mpich/CMakeFiles 0 + export LDFLAGS= + LDFLAGS= + popd ~/build/BUILD/espresso + module unload mpi/mpich-x86_64 ++ /usr/share/lmod/lmod/libexec/lmod bash unload mpi/mpich-x86_64 + eval unset '__LMOD_REF_COUNT_LD_LIBRARY_PATH;' unset 'LD_LIBRARY_PATH;' unset '__LMOD_REF_COUNT_LOADEDMODULES;' unset 'LOADEDMODULES;' '__LMOD_REF_COUNT_MANPATH=/usr/share/lmod/lmod/share/man:1;' export '__LMOD_REF_COUNT_MANPATH;' 'MANPATH=/usr/share/lmod/lmod/share/man;' export 'MANPATH;' 'MODULEPATH=/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core;' export 'MODULEPATH;' unset 'MPI_BIN;' unset 'MPI_COMPILER;' unset 'MPI_FORTRAN_MOD_DIR;' unset 'MPI_HOME;' unset 'MPI_INCLUDE;' unset 'MPI_LIB;' unset 'MPI_MAN;' unset 'MPI_PYTHON2_SITEARCH;' unset 'MPI_PYTHON3_SITEARCH;' unset 'MPI_PYTHON_SITEARCH;' unset 'MPI_SUFFIX;' unset 'MPI_SYSCONFIG;' '__LMOD_REF_COUNT_PATH=/usr/bin:1\;/bin:1\;/usr/sbin:1\;/sbin:1\;/usr/local/sbin:1;' export '__LMOD_REF_COUNT_PATH;' 'PATH=/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin;' export 'PATH;' '__LMOD_REF_COUNT_PKG_CONFIG_PATH=/usr/lib64/pkgconfig:1\;/usr/share/pkgconfig:1;' export '__LMOD_REF_COUNT_PKG_CONFIG_PATH;' 'PKG_CONFIG_PATH=:/usr/lib64/pkgconfig:/usr/share/pkgconfig;' export 'PKG_CONFIG_PATH;' unset '__LMOD_REF_COUNT__LMFILES_;' unset '_LMFILES_;' '_ModuleTable001_=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;' export '_ModuleTable001_;' '_ModuleTable002_=cmUvbG1vZC9sbW9kL21vZHVsZWZpbGVzL0NvcmUiLH0=;' export '_ModuleTable002_;' '_ModuleTable_Sz_=2;' export '_ModuleTable_Sz_;' ++ unset __LMOD_REF_COUNT_LD_LIBRARY_PATH ++ unset LD_LIBRARY_PATH ++ unset __LMOD_REF_COUNT_LOADEDMODULES ++ unset LOADEDMODULES ++ __LMOD_REF_COUNT_MANPATH=/usr/share/lmod/lmod/share/man:1 ++ export __LMOD_REF_COUNT_MANPATH ++ MANPATH=/usr/share/lmod/lmod/share/man ++ export MANPATH ++ MODULEPATH=/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core ++ export MODULEPATH ++ unset MPI_BIN ++ unset MPI_COMPILER ++ unset MPI_FORTRAN_MOD_DIR ++ unset MPI_HOME ++ unset MPI_INCLUDE ++ unset MPI_LIB ++ unset MPI_MAN ++ unset MPI_PYTHON2_SITEARCH ++ unset MPI_PYTHON3_SITEARCH ++ unset MPI_PYTHON_SITEARCH ++ unset MPI_SUFFIX ++ unset MPI_SYSCONFIG ++ __LMOD_REF_COUNT_PATH='/usr/bin:1;/bin:1;/usr/sbin:1;/sbin:1;/usr/local/sbin:1' ++ export __LMOD_REF_COUNT_PATH ++ PATH=/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin ++ export PATH ++ __LMOD_REF_COUNT_PKG_CONFIG_PATH='/usr/lib64/pkgconfig:1;/usr/share/pkgconfig:1' ++ export __LMOD_REF_COUNT_PKG_CONFIG_PATH ++ PKG_CONFIG_PATH=:/usr/lib64/pkgconfig:/usr/share/pkgconfig ++ export PKG_CONFIG_PATH ++ unset __LMOD_REF_COUNT__LMFILES_ ++ unset _LMFILES_ ++ _ModuleTable001_=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 ++ export _ModuleTable001_ ++ _ModuleTable002_=cmUvbG1vZC9sbW9kL21vZHVsZWZpbGVzL0NvcmUiLH0= ++ export _ModuleTable002_ ++ _ModuleTable_Sz_=2 ++ export _ModuleTable_Sz_ ++ : -s sh + eval + for mpi in mpich openmpi + module load mpi/openmpi-x86_64 ++ /usr/share/lmod/lmod/libexec/lmod bash load mpi/openmpi-x86_64 + eval '__LMOD_REF_COUNT_LD_LIBRARY_PATH=/usr/lib64/openmpi/lib:1;' export '__LMOD_REF_COUNT_LD_LIBRARY_PATH;' 'LD_LIBRARY_PATH=/usr/lib64/openmpi/lib;' export 'LD_LIBRARY_PATH;' '__LMOD_REF_COUNT_LOADEDMODULES=mpi/openmpi-x86_64:1;' export '__LMOD_REF_COUNT_LOADEDMODULES;' 'LOADEDMODULES=mpi/openmpi-x86_64;' export 'LOADEDMODULES;' '__LMOD_REF_COUNT_MANPATH=/usr/share/man/openmpi-x86_64:1\;/usr/share/lmod/lmod/share/man:1;' export '__LMOD_REF_COUNT_MANPATH;' 'MANPATH=:/usr/share/man/openmpi-x86_64:/usr/share/lmod/lmod/share/man;' export 'MANPATH;' 'MODULEPATH=/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core;' export 'MODULEPATH;' 'MPI_BIN=/usr/lib64/openmpi/bin;' export 'MPI_BIN;' 'MPI_COMPILER=openmpi-x86_64;' export 'MPI_COMPILER;' 'MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/openmpi;' export 'MPI_FORTRAN_MOD_DIR;' 'MPI_HOME=/usr/lib64/openmpi;' export 'MPI_HOME;' 'MPI_INCLUDE=/usr/include/openmpi-x86_64;' export 'MPI_INCLUDE;' 'MPI_LIB=/usr/lib64/openmpi/lib;' export 'MPI_LIB;' 'MPI_MAN=/usr/share/man/openmpi-x86_64;' export 'MPI_MAN;' 'MPI_PYTHON3_SITEARCH=/usr/lib64/python3.9/site-packages/openmpi;' export 'MPI_PYTHON3_SITEARCH;' 'MPI_SUFFIX=_openmpi;' export 'MPI_SUFFIX;' 'MPI_SYSCONFIG=/etc/openmpi-x86_64;' export 'MPI_SYSCONFIG;' '__LMOD_REF_COUNT_PATH=/usr/lib64/openmpi/bin:1\;/usr/bin:1\;/bin:1\;/usr/sbin:1\;/sbin:1\;/usr/local/sbin:1;' export '__LMOD_REF_COUNT_PATH;' 'PATH=/usr/lib64/openmpi/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin;' export 'PATH;' '__LMOD_REF_COUNT_PKG_CONFIG_PATH=/usr/lib64/openmpi/lib/pkgconfig:1\;/usr/lib64/pkgconfig:1\;/usr/share/pkgconfig:1;' export '__LMOD_REF_COUNT_PKG_CONFIG_PATH;' 'PKG_CONFIG_PATH=/usr/lib64/openmpi/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig;' export 'PKG_CONFIG_PATH;' '__LMOD_REF_COUNT__LMFILES_=/usr/share/modulefiles/mpi/openmpi-x86_64:1;' export '__LMOD_REF_COUNT__LMFILES_;' '_LMFILES_=/usr/share/modulefiles/mpi/openmpi-x86_64;' export '_LMFILES_;' '_ModuleTable001_=X01vZHVsZVRhYmxlXz17WyJNVHZlcnNpb24iXT0zLFsiY19yZWJ1aWxkVGltZSJdPWZhbHNlLFsiY19zaG9ydFRpbWUiXT1mYWxzZSxkZXB0aFQ9e30sZmFtaWx5PXt9LG1UPXttcGk9e1siZm4iXT0iL3Vzci9zaGFyZS9tb2R1bGVmaWxlcy9tcGkvb3Blbm1waS14ODZfNjQiLFsiZnVsbE5hbWUiXT0ibXBpL29wZW5tcGkteDg2XzY0IixbImxvYWRPcmRlciJdPTEscHJvcFQ9e30sWyJzdGFja0RlcHRoIl09MCxbInN0YXR1cyJdPSJhY3RpdmUiLFsidXNlck5hbWUiXT0ibXBpL29wZW5tcGkteDg2XzY0Iix9LH0sbXBhdGhBPXsiL2V0Yy9tb2R1bGVmaWxlcyIsIi91c3Ivc2hhcmUvbW9kdWxlZmlsZXMiLCIvdXNyL3NoYXJlL21vZHVsZWZpbGVzL0xpbnV4IiwiL3Vzci9zaGFy;' export '_ModuleTable001_;' '_ModuleTable002_=ZS9tb2R1bGVmaWxlcy9Db3JlIiwiL3Vzci9zaGFyZS9sbW9kL2xtb2QvbW9kdWxlZmlsZXMvQ29yZSIsfSxbInN5c3RlbUJhc2VNUEFUSCJdPSIvZXRjL21vZHVsZWZpbGVzOi91c3Ivc2hhcmUvbW9kdWxlZmlsZXM6L3Vzci9zaGFyZS9tb2R1bGVmaWxlcy9MaW51eDovdXNyL3NoYXJlL21vZHVsZWZpbGVzL0NvcmU6L3Vzci9zaGFyZS9sbW9kL2xtb2QvbW9kdWxlZmlsZXMvQ29yZSIsfQ==;' export '_ModuleTable002_;' '_ModuleTable_Sz_=2;' export '_ModuleTable_Sz_;' ++ __LMOD_REF_COUNT_LD_LIBRARY_PATH=/usr/lib64/openmpi/lib:1 ++ export __LMOD_REF_COUNT_LD_LIBRARY_PATH ++ LD_LIBRARY_PATH=/usr/lib64/openmpi/lib ++ export LD_LIBRARY_PATH ++ __LMOD_REF_COUNT_LOADEDMODULES=mpi/openmpi-x86_64:1 ++ export __LMOD_REF_COUNT_LOADEDMODULES ++ LOADEDMODULES=mpi/openmpi-x86_64 ++ export LOADEDMODULES ++ __LMOD_REF_COUNT_MANPATH='/usr/share/man/openmpi-x86_64:1;/usr/share/lmod/lmod/share/man:1' ++ export __LMOD_REF_COUNT_MANPATH ++ MANPATH=:/usr/share/man/openmpi-x86_64:/usr/share/lmod/lmod/share/man ++ export MANPATH ++ MODULEPATH=/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core ++ export MODULEPATH ++ MPI_BIN=/usr/lib64/openmpi/bin ++ export MPI_BIN ++ MPI_COMPILER=openmpi-x86_64 ++ export MPI_COMPILER ++ MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/openmpi ++ export MPI_FORTRAN_MOD_DIR ++ MPI_HOME=/usr/lib64/openmpi ++ export MPI_HOME ++ MPI_INCLUDE=/usr/include/openmpi-x86_64 ++ export MPI_INCLUDE ++ MPI_LIB=/usr/lib64/openmpi/lib ++ export MPI_LIB ++ MPI_MAN=/usr/share/man/openmpi-x86_64 ++ export MPI_MAN ++ MPI_PYTHON3_SITEARCH=/usr/lib64/python3.9/site-packages/openmpi ++ export MPI_PYTHON3_SITEARCH ++ MPI_SUFFIX=_openmpi ++ export MPI_SUFFIX ++ MPI_SYSCONFIG=/etc/openmpi-x86_64 ++ export MPI_SYSCONFIG ++ __LMOD_REF_COUNT_PATH='/usr/lib64/openmpi/bin:1;/usr/bin:1;/bin:1;/usr/sbin:1;/sbin:1;/usr/local/sbin:1' ++ export __LMOD_REF_COUNT_PATH ++ PATH=/usr/lib64/openmpi/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin ++ export PATH ++ __LMOD_REF_COUNT_PKG_CONFIG_PATH='/usr/lib64/openmpi/lib/pkgconfig:1;/usr/lib64/pkgconfig:1;/usr/share/pkgconfig:1' ++ export __LMOD_REF_COUNT_PKG_CONFIG_PATH ++ PKG_CONFIG_PATH=/usr/lib64/openmpi/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig ++ export PKG_CONFIG_PATH ++ __LMOD_REF_COUNT__LMFILES_=/usr/share/modulefiles/mpi/openmpi-x86_64:1 ++ export __LMOD_REF_COUNT__LMFILES_ ++ _LMFILES_=/usr/share/modulefiles/mpi/openmpi-x86_64 ++ export _LMFILES_ ++ _ModuleTable001_=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 ++ export _ModuleTable001_ ++ _ModuleTable002_=ZS9tb2R1bGVmaWxlcy9Db3JlIiwiL3Vzci9zaGFyZS9sbW9kL2xtb2QvbW9kdWxlZmlsZXMvQ29yZSIsfSxbInN5c3RlbUJhc2VNUEFUSCJdPSIvZXRjL21vZHVsZWZpbGVzOi91c3Ivc2hhcmUvbW9kdWxlZmlsZXM6L3Vzci9zaGFyZS9tb2R1bGVmaWxlcy9MaW51eDovdXNyL3NoYXJlL21vZHVsZWZpbGVzL0NvcmU6L3Vzci9zaGFyZS9sbW9kL2xtb2QvbW9kdWxlZmlsZXMvQ29yZSIsfQ== ++ export _ModuleTable002_ ++ _ModuleTable_Sz_=2 ++ export _ModuleTable_Sz_ ++ : -s sh + eval + mkdir openmpi + pushd openmpi ~/build/BUILD/espresso/openmpi ~/build/BUILD/espresso + old_LDFLAGS= + export 'LDFLAGS= -Wl,-rpath,/usr/lib64/python3.9/site-packages/openmpi/espressomd' + LDFLAGS=' -Wl,-rpath,/usr/lib64/python3.9/site-packages/openmpi/espressomd' + CFLAGS='-O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection' + export CFLAGS + CXXFLAGS='-O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection' + export CXXFLAGS + FFLAGS='-O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -I/usr/lib64/gfortran/modules' + export FFLAGS + FCFLAGS='-O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -I/usr/lib64/gfortran/modules' + export FCFLAGS + LDFLAGS=' -Wl,-rpath,/usr/lib64/python3.9/site-packages/openmpi/espressomd' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + /usr/bin/cmake -DCMAKE_C_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_CXX_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_Fortran_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_VERBOSE_MAKEFILE:BOOL=ON -DCMAKE_INSTALL_PREFIX:PATH=/usr -DINCLUDE_INSTALL_DIR:PATH=/usr/include -DLIB_INSTALL_DIR:PATH=/usr/lib64 -DSYSCONF_INSTALL_DIR:PATH=/etc -DSHARE_INSTALL_PREFIX:PATH=/usr/share -DLIB_SUFFIX=64 -DBUILD_SHARED_LIBS:BOOL=ON -DWITH_PYTHON=ON -DPYTHON_EXECUTABLE=/usr/bin/python3 -DWITH_TESTS=ON -DCMAKE_SKIP_RPATH=ON -DINSTALL_PYPRESSO=OFF -DCYTHON_EXECUTABLE=/usr/bin/cython -DLIBDIR=/usr/lib64/openmpi/lib -DPYTHON_INSTDIR=/usr/lib64/python3.9/site-packages/openmpi .. CMake Warning (dev) at /usr/share/cmake/Modules/GNUInstallDirs.cmake:225 (message): Unable to determine default CMAKE_INSTALL_LIBDIR directory because no target architecture is known. Please enable at least one language before including GNUInstallDirs. Call Stack (most recent call first): CMakeLists.txt:23 (include) This warning is for project developers. Use -Wno-dev to suppress it. -- The C compiler identification is GNU 10.1.1 -- The CXX compiler identification is GNU 10.1.1 -- Check for working C compiler: /usr/bin/gcc -- Check for working C compiler: /usr/bin/gcc - works -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Detecting C compile features -- Detecting C compile features - done -- Check for working CXX compiler: /usr/bin/g++ -- Check for working CXX compiler: /usr/bin/g++ - works -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Detecting CXX compile features -- Detecting CXX compile features - done -- Config file: /builddir/build/BUILD/espresso/src/config/myconfig-default.hpp -- Performing Test result__PRETTY_FUNCTION__ -- Performing Test result__PRETTY_FUNCTION__ - Success CUDA_TOOLKIT_ROOT_DIR not found or specified -- Could NOT find CUDA (missing: CUDA_TOOLKIT_ROOT_DIR CUDA_NVCC_EXECUTABLE CUDA_INCLUDE_DIRS CUDA_CUDART_LIBRARY) (Required is at least version "9.0") -- Found PythonInterp: /usr/bin/python3 (found suitable version "3.9", minimum required is "3.3") -- Found PythonInterp: /usr/bin/python3 (found version "3.9") -- Found Cython version 0.29.19 -- Found Cython: /usr/bin/cython (Required is at least version "0.23") -- Found NumPy: /usr/lib64/python3.9/site-packages/numpy/core/include (found version "1.19.0rc2") -- NumPy ver. 1.19.0rc2 found (include: /usr/lib64/python3.9/site-packages/numpy/core/include) -- Found FFTW3: /usr/lib64/libfftw3.so -- HDF5: Using hdf5 compiler wrapper to determine C configuration -- Found HDF5: /usr/lib64/openmpi/lib/libhdf5.so (found suitable version "1.10.5", minimum required is "1.8") found components: C -- Found PY_h5py: /usr/lib64/python3.9/site-packages/h5py -- Found PkgConfig: /usr/bin/pkg-config (found version "1.7.0") -- Found GSL: /usr/include (found version "2.6") -- Found MPI_C: /usr/lib64/openmpi/lib/libmpi.so (found suitable version "3.1", minimum required is "3.0") -- Found MPI_CXX: /usr/lib64/openmpi/lib/libmpi_cxx.so (found suitable version "3.1", minimum required is "3.0") -- Found MPI: TRUE (found suitable version "3.1", minimum required is "3.0") -- Found Boost: /usr/include (found suitable version "1.73.0", minimum required is "1.55.0") found components: mpi serialization filesystem system unit_test_framework -- Could NOT find Doxygen (missing: DOXYGEN_EXECUTABLE) -- Could NOT find Sphinx (missing: SPHINX_EXECUTABLE SPHINX_API_DOC_EXE) (Required is at least version "1.6.6") -- Could NOT find Git (missing: GIT_EXECUTABLE) -- The following features have been enabled: * HDF5 (required version >= 1.8), parallel -- The following OPTIONAL packages have been found: * FFTW3 * HDF5 (required version >= 1.8), parallel * PkgConfig * GSL -- The following REQUIRED packages have been found: * PythonInterp * Cython (required version >= 0.23) * NumPy * MPI (required version >= 3.0) * Boost (required version >= 1.55.0) -- The following OPTIONAL packages have not been found: * CUDA (required version >= 9.0) * Doxygen * Sphinx (required version >= 1.6.6) * Git -- Configuring done -- Generating done CMake Warning: Manually-specified variables were not used by the project: CMAKE_C_FLAGS_RELEASE CMAKE_Fortran_FLAGS_RELEASE INCLUDE_INSTALL_DIR LIBDIR LIB_INSTALL_DIR LIB_SUFFIX SHARE_INSTALL_PREFIX SYSCONF_INSTALL_DIR -- Build files have been written to: /builddir/build/BUILD/espresso/openmpi + LD_LIBRARY_PATH=/builddir/build/BUILD/espresso/openmpi/src/config + /usr/bin/make -O -j1 V=1 VERBOSE=1 /usr/bin/cmake -S/builddir/build/BUILD/espresso -B/builddir/build/BUILD/espresso/openmpi --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/espresso/openmpi/CMakeFiles /builddir/build/BUILD/espresso/openmpi/CMakeFiles/progress.marks /usr/bin/make -f CMakeFiles/Makefile2 all make[1]: Entering directory '/builddir/build/BUILD/espresso/openmpi' /usr/bin/make -f src/pdbparser/CMakeFiles/pdbparser.dir/build.make src/pdbparser/CMakeFiles/pdbparser.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' cd /builddir/build/BUILD/espresso/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/pdbparser /builddir/build/BUILD/espresso/openmpi /builddir/build/BUILD/espresso/openmpi/src/pdbparser /builddir/build/BUILD/espresso/openmpi/src/pdbparser/CMakeFiles/pdbparser.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/espresso/openmpi/src/pdbparser/CMakeFiles/pdbparser.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/espresso/openmpi/src/pdbparser/CMakeFiles/pdbparser.dir/depend.internal". Dependee "/builddir/build/BUILD/espresso/openmpi/src/pdbparser/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/espresso/openmpi/src/pdbparser/CMakeFiles/pdbparser.dir/depend.internal". Scanning dependencies of target pdbparser make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' /usr/bin/make -f src/pdbparser/CMakeFiles/pdbparser.dir/build.make src/pdbparser/CMakeFiles/pdbparser.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' [ 0%] Building CXX object src/pdbparser/CMakeFiles/pdbparser.dir/src/PdbParser.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/pdbparser && /usr/bin/g++ -Dpdbparser_EXPORTS -I/builddir/build/BUILD/espresso/src/pdbparser/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -std=c++14 -o CMakeFiles/pdbparser.dir/src/PdbParser.cpp.o -c /builddir/build/BUILD/espresso/src/pdbparser/src/PdbParser.cpp [ 1%] Linking CXX shared library pdbparser.so cd /builddir/build/BUILD/espresso/openmpi/src/pdbparser && /usr/bin/cmake -E cmake_link_script CMakeFiles/pdbparser.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -Wl,-rpath,/usr/lib64/python3.9/site-packages/openmpi/espressomd -shared -Wl,-soname,pdbparser.so -o pdbparser.so CMakeFiles/pdbparser.dir/src/PdbParser.cpp.o make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' [ 1%] Built target pdbparser /usr/bin/make -f src/config/CMakeFiles/generate_config_features.dir/build.make src/config/CMakeFiles/generate_config_features.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' cd /builddir/build/BUILD/espresso/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/config /builddir/build/BUILD/espresso/openmpi /builddir/build/BUILD/espresso/openmpi/src/config /builddir/build/BUILD/espresso/openmpi/src/config/CMakeFiles/generate_config_features.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/espresso/openmpi/src/config/CMakeFiles/generate_config_features.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/espresso/openmpi/src/config/CMakeFiles/generate_config_features.dir/depend.internal". Dependee "/builddir/build/BUILD/espresso/openmpi/src/config/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/espresso/openmpi/src/config/CMakeFiles/generate_config_features.dir/depend.internal". Scanning dependencies of target generate_config_features make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' /usr/bin/make -f src/config/CMakeFiles/generate_config_features.dir/build.make src/config/CMakeFiles/generate_config_features.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' [ 1%] Generating config-features.hpp, config-features.cpp cd /builddir/build/BUILD/espresso/openmpi/src/config && /usr/bin/python3 /builddir/build/BUILD/espresso/src/config/gen_featureconfig.py /builddir/build/BUILD/espresso/src/config/features.def /builddir/build/BUILD/espresso/openmpi/src/config/config-features.hpp /builddir/build/BUILD/espresso/openmpi/src/config/config-features.cpp Reading definitions from /builddir/build/BUILD/espresso/src/config/features.def... Done. Writing /builddir/build/BUILD/espresso/openmpi/src/config/config-features.hpp... Done. Writing /builddir/build/BUILD/espresso/openmpi/src/config/config-features.cpp... Done. make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' [ 1%] Built target generate_config_features /usr/bin/make -f CMakeFiles/myconfig.dir/build.make CMakeFiles/myconfig.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' cd /builddir/build/BUILD/espresso/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/openmpi /builddir/build/BUILD/espresso/openmpi /builddir/build/BUILD/espresso/openmpi/CMakeFiles/myconfig.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/espresso/openmpi/CMakeFiles/myconfig.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/espresso/openmpi/CMakeFiles/myconfig.dir/depend.internal". Dependee "/builddir/build/BUILD/espresso/openmpi/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/espresso/openmpi/CMakeFiles/myconfig.dir/depend.internal". Scanning dependencies of target myconfig make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' /usr/bin/make -f CMakeFiles/myconfig.dir/build.make CMakeFiles/myconfig.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' make[2]: Nothing to be done for 'CMakeFiles/myconfig.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' [ 1%] Built target myconfig /usr/bin/make -f src/config/CMakeFiles/version.dir/build.make src/config/CMakeFiles/version.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' cd /builddir/build/BUILD/espresso/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/config /builddir/build/BUILD/espresso/openmpi /builddir/build/BUILD/espresso/openmpi/src/config /builddir/build/BUILD/espresso/openmpi/src/config/CMakeFiles/version.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/espresso/openmpi/src/config/CMakeFiles/version.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/espresso/openmpi/src/config/CMakeFiles/version.dir/depend.internal". Dependee "/builddir/build/BUILD/espresso/openmpi/src/config/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/espresso/openmpi/src/config/CMakeFiles/version.dir/depend.internal". Scanning dependencies of target version make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' /usr/bin/make -f src/config/CMakeFiles/version.dir/build.make src/config/CMakeFiles/version.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' cd /builddir/build/BUILD/espresso/openmpi/src/config && /usr/bin/cmake -DPROJECT_SOURCE_DIR=/builddir/build/BUILD/espresso -DPROJECT_VERSION=4.1.2 -DGIT_EXECUTABLE=GIT_EXECUTABLE-NOTFOUND -P /builddir/build/BUILD/espresso/cmake/version.cmake make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' [ 1%] Built target version /usr/bin/make -f src/config/CMakeFiles/check_myconfig.dir/build.make src/config/CMakeFiles/check_myconfig.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' cd /builddir/build/BUILD/espresso/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/config /builddir/build/BUILD/espresso/openmpi /builddir/build/BUILD/espresso/openmpi/src/config /builddir/build/BUILD/espresso/openmpi/src/config/CMakeFiles/check_myconfig.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/espresso/openmpi/src/config/CMakeFiles/check_myconfig.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/espresso/openmpi/src/config/CMakeFiles/check_myconfig.dir/depend.internal". 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-Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/accumulators.cpp.o -c /builddir/build/BUILD/espresso/src/core/accumulators.cpp [ 3%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/cells.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/openmpi-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/cells.cpp.o -c /builddir/build/BUILD/espresso/src/core/cells.cpp [ 3%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/collision.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/openmpi-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/collision.cpp.o -c /builddir/build/BUILD/espresso/src/core/collision.cpp [ 3%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/comfixed_global.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/openmpi-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/comfixed_global.cpp.o -c /builddir/build/BUILD/espresso/src/core/comfixed_global.cpp [ 3%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/communication.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/openmpi-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/communication.cpp.o -c /builddir/build/BUILD/espresso/src/core/communication.cpp [ 4%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/constraints.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/openmpi-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/constraints.cpp.o -c /builddir/build/BUILD/espresso/src/core/constraints.cpp [ 4%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/debug.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/openmpi-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/debug.cpp.o -c /builddir/build/BUILD/espresso/src/core/debug.cpp [ 4%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/diamond.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/openmpi-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/diamond.cpp.o -c /builddir/build/BUILD/espresso/src/core/diamond.cpp [ 4%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/domain_decomposition.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/openmpi-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/domain_decomposition.cpp.o -c /builddir/build/BUILD/espresso/src/core/domain_decomposition.cpp [ 4%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/dpd.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/openmpi-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/dpd.cpp.o -c /builddir/build/BUILD/espresso/src/core/dpd.cpp [ 6%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/energy.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/openmpi-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/energy.cpp.o -c /builddir/build/BUILD/espresso/src/core/energy.cpp [ 6%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/errorhandling.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/openmpi-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/errorhandling.cpp.o -c /builddir/build/BUILD/espresso/src/core/errorhandling.cpp [ 6%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/EspressoSystemInterface.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/openmpi-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/EspressoSystemInterface.cpp.o -c /builddir/build/BUILD/espresso/src/core/EspressoSystemInterface.cpp [ 6%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/forcecap.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/openmpi-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/forcecap.cpp.o -c /builddir/build/BUILD/espresso/src/core/forcecap.cpp [ 6%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/forces.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/openmpi-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/forces.cpp.o -c /builddir/build/BUILD/espresso/src/core/forces.cpp [ 7%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/galilei.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/openmpi-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/galilei.cpp.o -c /builddir/build/BUILD/espresso/src/core/galilei.cpp [ 7%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/ghosts.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/builddir/build/BUILD/espresso/src/core 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CMakeFiles/EspressoCore.dir/ghosts.cpp.o -c /builddir/build/BUILD/espresso/src/core/ghosts.cpp [ 7%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/global.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/openmpi-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/global.cpp.o -c /builddir/build/BUILD/espresso/src/core/global.cpp [ 7%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/grid.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/openmpi-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/grid.cpp.o -c /builddir/build/BUILD/espresso/src/core/grid.cpp [ 7%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/immersed_boundaries.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/openmpi-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/immersed_boundaries.cpp.o -c /builddir/build/BUILD/espresso/src/core/immersed_boundaries.cpp [ 9%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/event.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/openmpi-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/event.cpp.o -c /builddir/build/BUILD/espresso/src/core/event.cpp [ 9%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/integrate.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/openmpi-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/integrate.cpp.o -c /builddir/build/BUILD/espresso/src/core/integrate.cpp [ 9%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/integrators/velocity_verlet_npt.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/openmpi-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC 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-fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/layered.cpp.o -c /builddir/build/BUILD/espresso/src/core/layered.cpp [ 9%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/metadynamics.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/openmpi-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/metadynamics.cpp.o -c /builddir/build/BUILD/espresso/src/core/metadynamics.cpp [ 10%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/integrators/steepest_descent.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/openmpi-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered 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-specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/npt.cpp.o -c /builddir/build/BUILD/espresso/src/core/npt.cpp [ 10%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/nsquare.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/openmpi-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/nsquare.cpp.o -c /builddir/build/BUILD/espresso/src/core/nsquare.cpp [ 10%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/partCfg_global.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/openmpi-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/partCfg_global.cpp.o -c /builddir/build/BUILD/espresso/src/core/partCfg_global.cpp [ 12%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/particle_data.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/openmpi-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/particle_data.cpp.o -c /builddir/build/BUILD/espresso/src/core/particle_data.cpp [ 12%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/polymer.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/openmpi-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/polymer.cpp.o -c /builddir/build/BUILD/espresso/src/core/polymer.cpp [ 12%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/polynom.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/openmpi-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/polynom.cpp.o -c /builddir/build/BUILD/espresso/src/core/polynom.cpp [ 12%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/pressure.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/openmpi-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/pressure.cpp.o -c /builddir/build/BUILD/espresso/src/core/pressure.cpp [ 12%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/random.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/openmpi-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/random.cpp.o -c /builddir/build/BUILD/espresso/src/core/random.cpp [ 14%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/rattle.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/openmpi-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/rattle.cpp.o -c /builddir/build/BUILD/espresso/src/core/rattle.cpp [ 14%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/reaction_ensemble.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/openmpi-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/reaction_ensemble.cpp.o -c /builddir/build/BUILD/espresso/src/core/reaction_ensemble.cpp [ 14%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/rotate_system.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/openmpi-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/rotate_system.cpp.o -c /builddir/build/BUILD/espresso/src/core/rotate_system.cpp [ 14%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/rotation.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/openmpi-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/rotation.cpp.o -c /builddir/build/BUILD/espresso/src/core/rotation.cpp [ 14%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/RuntimeErrorCollector.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/openmpi-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/RuntimeErrorCollector.cpp.o -c /builddir/build/BUILD/espresso/src/core/RuntimeErrorCollector.cpp [ 15%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/RuntimeError.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/openmpi-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/RuntimeError.cpp.o -c /builddir/build/BUILD/espresso/src/core/RuntimeError.cpp [ 15%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/RuntimeErrorStream.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/openmpi-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/RuntimeErrorStream.cpp.o -c /builddir/build/BUILD/espresso/src/core/RuntimeErrorStream.cpp [ 15%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/specfunc.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/openmpi-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/specfunc.cpp.o -c /builddir/build/BUILD/espresso/src/core/specfunc.cpp [ 15%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/statistics_chain.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/openmpi-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/statistics_chain.cpp.o -c /builddir/build/BUILD/espresso/src/core/statistics_chain.cpp [ 15%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/statistics.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/openmpi-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/statistics.cpp.o -c /builddir/build/BUILD/espresso/src/core/statistics.cpp [ 17%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/SystemInterface.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/openmpi-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/SystemInterface.cpp.o -c /builddir/build/BUILD/espresso/src/core/SystemInterface.cpp [ 17%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/thermostat.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/openmpi-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered 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-fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/tuning.cpp.o -c /builddir/build/BUILD/espresso/src/core/tuning.cpp [ 17%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/virtual_sites.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/openmpi-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/virtual_sites.cpp.o -c /builddir/build/BUILD/espresso/src/core/virtual_sites.cpp [ 17%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/accumulators/Correlator.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/openmpi-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered 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-Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/accumulators/MeanVarianceCalculator.cpp.o -c /builddir/build/BUILD/espresso/src/core/accumulators/MeanVarianceCalculator.cpp [ 18%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/actor/ActorList.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/openmpi-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/actor/ActorList.cpp.o -c /builddir/build/BUILD/espresso/src/core/actor/ActorList.cpp [ 18%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/actor/DipolarBarnesHut.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/openmpi-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/actor/DipolarBarnesHut.cpp.o -c /builddir/build/BUILD/espresso/src/core/actor/DipolarBarnesHut.cpp [ 18%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/actor/DipolarDirectSum.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/openmpi-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/actor/DipolarDirectSum.cpp.o -c /builddir/build/BUILD/espresso/src/core/actor/DipolarDirectSum.cpp [ 18%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/actor/Mmm1dgpuForce.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/openmpi-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/actor/Mmm1dgpuForce.cpp.o -c /builddir/build/BUILD/espresso/src/core/actor/Mmm1dgpuForce.cpp [ 20%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/bonded_interactions/angle_cosine.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/openmpi-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/bonded_interactions/angle_cosine.cpp.o -c /builddir/build/BUILD/espresso/src/core/bonded_interactions/angle_cosine.cpp [ 20%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/bonded_interactions/angle_cossquare.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/openmpi-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/bonded_interactions/angle_cossquare.cpp.o -c /builddir/build/BUILD/espresso/src/core/bonded_interactions/angle_cossquare.cpp [ 20%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/bonded_interactions/angle_harmonic.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/openmpi-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/bonded_interactions/angle_harmonic.cpp.o -c /builddir/build/BUILD/espresso/src/core/bonded_interactions/angle_harmonic.cpp [ 20%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/bonded_interactions/bonded_coulomb.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/openmpi-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/bonded_interactions/bonded_coulomb.cpp.o -c /builddir/build/BUILD/espresso/src/core/bonded_interactions/bonded_coulomb.cpp [ 20%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/bonded_interactions/bonded_coulomb_sr.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/openmpi-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/bonded_interactions/bonded_coulomb_sr.cpp.o -c /builddir/build/BUILD/espresso/src/core/bonded_interactions/bonded_coulomb_sr.cpp [ 21%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/bonded_interactions/bonded_interaction_data.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/openmpi-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/bonded_interactions/bonded_interaction_data.cpp.o -c /builddir/build/BUILD/espresso/src/core/bonded_interactions/bonded_interaction_data.cpp [ 21%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/bonded_interactions/bonded_tab.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/openmpi-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/bonded_interactions/bonded_tab.cpp.o -c /builddir/build/BUILD/espresso/src/core/bonded_interactions/bonded_tab.cpp [ 21%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/bonded_interactions/dihedral.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/openmpi-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/bonded_interactions/dihedral.cpp.o -c /builddir/build/BUILD/espresso/src/core/bonded_interactions/dihedral.cpp [ 21%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/bonded_interactions/fene.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/openmpi-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/bonded_interactions/fene.cpp.o -c /builddir/build/BUILD/espresso/src/core/bonded_interactions/fene.cpp [ 21%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/bonded_interactions/harmonic.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/openmpi-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/bonded_interactions/harmonic.cpp.o -c /builddir/build/BUILD/espresso/src/core/bonded_interactions/harmonic.cpp [ 23%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/bonded_interactions/harmonic_dumbbell.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/openmpi-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/bonded_interactions/harmonic_dumbbell.cpp.o -c /builddir/build/BUILD/espresso/src/core/bonded_interactions/harmonic_dumbbell.cpp [ 23%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/bonded_interactions/quartic.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/openmpi-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/bonded_interactions/quartic.cpp.o -c /builddir/build/BUILD/espresso/src/core/bonded_interactions/quartic.cpp [ 23%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/bonded_interactions/subt_lj.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/openmpi-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/bonded_interactions/subt_lj.cpp.o -c /builddir/build/BUILD/espresso/src/core/bonded_interactions/subt_lj.cpp [ 23%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/bonded_interactions/thermalized_bond.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/openmpi-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/bonded_interactions/thermalized_bond.cpp.o -c /builddir/build/BUILD/espresso/src/core/bonded_interactions/thermalized_bond.cpp [ 23%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/bonded_interactions/umbrella.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/openmpi-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/bonded_interactions/umbrella.cpp.o -c /builddir/build/BUILD/espresso/src/core/bonded_interactions/umbrella.cpp [ 25%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/constraints/HomogeneousMagneticField.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/openmpi-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/constraints/HomogeneousMagneticField.cpp.o -c /builddir/build/BUILD/espresso/src/core/constraints/HomogeneousMagneticField.cpp [ 25%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/constraints/ShapeBasedConstraint.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/openmpi-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/constraints/ShapeBasedConstraint.cpp.o -c /builddir/build/BUILD/espresso/src/core/constraints/ShapeBasedConstraint.cpp [ 25%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/electrostatics_magnetostatics/debye_hueckel.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/openmpi-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/electrostatics_magnetostatics/debye_hueckel.cpp.o -c /builddir/build/BUILD/espresso/src/core/electrostatics_magnetostatics/debye_hueckel.cpp [ 25%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/electrostatics_magnetostatics/elc.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/utils/include 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src/core/CMakeFiles/EspressoCore.dir/electrostatics_magnetostatics/icc.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/openmpi-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/electrostatics_magnetostatics/icc.cpp.o -c /builddir/build/BUILD/espresso/src/core/electrostatics_magnetostatics/icc.cpp [ 26%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/electrostatics_magnetostatics/magnetic_non_p3m_methods.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/openmpi-x86_64 -isystem 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-I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/openmpi-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/electrostatics_magnetostatics/mmm2d.cpp.o -c 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-specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/electrostatics_magnetostatics/mmm-common.cpp.o -c /builddir/build/BUILD/espresso/src/core/electrostatics_magnetostatics/mmm-common.cpp [ 28%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/electrostatics_magnetostatics/p3m-common.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/openmpi-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/electrostatics_magnetostatics/p3m-common.cpp.o -c /builddir/build/BUILD/espresso/src/core/electrostatics_magnetostatics/p3m-common.cpp [ 28%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/electrostatics_magnetostatics/p3m.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/openmpi-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/electrostatics_magnetostatics/p3m.cpp.o -c /builddir/build/BUILD/espresso/src/core/electrostatics_magnetostatics/p3m.cpp [ 28%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/electrostatics_magnetostatics/p3m-dipolar.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/openmpi-x86_64 -isystem 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-I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/openmpi-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/electrostatics_magnetostatics/fft.cpp.o -c /builddir/build/BUILD/espresso/src/core/electrostatics_magnetostatics/fft.cpp [ 29%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/electrostatics_magnetostatics/coulomb.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/openmpi-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/electrostatics_magnetostatics/coulomb.cpp.o -c /builddir/build/BUILD/espresso/src/core/electrostatics_magnetostatics/coulomb.cpp [ 29%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/electrostatics_magnetostatics/dipole.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/openmpi-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/electrostatics_magnetostatics/dipole.cpp.o -c /builddir/build/BUILD/espresso/src/core/electrostatics_magnetostatics/dipole.cpp [ 29%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/electrostatics_magnetostatics/reaction_field.cpp.o cd 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-I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/openmpi-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/grid_based_algorithms/lattice.cpp.o -c /builddir/build/BUILD/espresso/src/core/grid_based_algorithms/lattice.cpp [ 31%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/grid_based_algorithms/lb_boundaries.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/openmpi-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/grid_based_algorithms/lb_boundaries.cpp.o -c /builddir/build/BUILD/espresso/src/core/grid_based_algorithms/lb_boundaries.cpp [ 31%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/grid_based_algorithms/lb_collective_interface.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/openmpi-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/grid_based_algorithms/lb_collective_interface.cpp.o -c /builddir/build/BUILD/espresso/src/core/grid_based_algorithms/lb_collective_interface.cpp [ 31%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/grid_based_algorithms/lb.cpp.o cd 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-Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/grid_based_algorithms/lb_interface.cpp.o -c /builddir/build/BUILD/espresso/src/core/grid_based_algorithms/lb_interface.cpp [ 32%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/grid_based_algorithms/lb_interpolation.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/openmpi-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/grid_based_algorithms/lb_interpolation.cpp.o -c /builddir/build/BUILD/espresso/src/core/grid_based_algorithms/lb_interpolation.cpp [ 32%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/grid_based_algorithms/lb_particle_coupling.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/openmpi-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/grid_based_algorithms/lb_particle_coupling.cpp.o -c /builddir/build/BUILD/espresso/src/core/grid_based_algorithms/lb_particle_coupling.cpp [ 32%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/immersed_boundary/ibm_tribend.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/openmpi-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/immersed_boundary/ibm_tribend.cpp.o -c /builddir/build/BUILD/espresso/src/core/immersed_boundary/ibm_tribend.cpp [ 32%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/immersed_boundary/ibm_triel.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/openmpi-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/immersed_boundary/ibm_triel.cpp.o -c /builddir/build/BUILD/espresso/src/core/immersed_boundary/ibm_triel.cpp [ 34%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/immersed_boundary/ImmersedBoundaries.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/openmpi-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/immersed_boundary/ImmersedBoundaries.cpp.o -c /builddir/build/BUILD/espresso/src/core/immersed_boundary/ImmersedBoundaries.cpp [ 34%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/nonbonded_interactions/bmhtf-nacl.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/openmpi-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/nonbonded_interactions/bmhtf-nacl.cpp.o -c /builddir/build/BUILD/espresso/src/core/nonbonded_interactions/bmhtf-nacl.cpp [ 34%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/nonbonded_interactions/buckingham.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/openmpi-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/nonbonded_interactions/buckingham.cpp.o -c /builddir/build/BUILD/espresso/src/core/nonbonded_interactions/buckingham.cpp [ 34%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/nonbonded_interactions/gaussian.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/openmpi-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/nonbonded_interactions/gaussian.cpp.o -c /builddir/build/BUILD/espresso/src/core/nonbonded_interactions/gaussian.cpp [ 34%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/nonbonded_interactions/gay_berne.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/openmpi-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/nonbonded_interactions/gay_berne.cpp.o -c /builddir/build/BUILD/espresso/src/core/nonbonded_interactions/gay_berne.cpp [ 35%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/nonbonded_interactions/hat.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/openmpi-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/nonbonded_interactions/hat.cpp.o -c /builddir/build/BUILD/espresso/src/core/nonbonded_interactions/hat.cpp [ 35%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/nonbonded_interactions/hertzian.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/openmpi-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/nonbonded_interactions/hertzian.cpp.o -c /builddir/build/BUILD/espresso/src/core/nonbonded_interactions/hertzian.cpp [ 35%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/nonbonded_interactions/ljcos2.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/openmpi-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/nonbonded_interactions/ljcos2.cpp.o -c /builddir/build/BUILD/espresso/src/core/nonbonded_interactions/ljcos2.cpp [ 35%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/nonbonded_interactions/ljcos.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/openmpi-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/nonbonded_interactions/ljcos.cpp.o -c /builddir/build/BUILD/espresso/src/core/nonbonded_interactions/ljcos.cpp [ 35%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/nonbonded_interactions/lj.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/openmpi-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/nonbonded_interactions/lj.cpp.o -c /builddir/build/BUILD/espresso/src/core/nonbonded_interactions/lj.cpp [ 37%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/nonbonded_interactions/ljgen.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/openmpi-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/nonbonded_interactions/ljgen.cpp.o -c /builddir/build/BUILD/espresso/src/core/nonbonded_interactions/ljgen.cpp [ 37%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/nonbonded_interactions/morse.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/openmpi-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC 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-specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/nonbonded_interactions/nonbonded_interaction_data.cpp.o -c /builddir/build/BUILD/espresso/src/core/nonbonded_interactions/nonbonded_interaction_data.cpp [ 37%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/nonbonded_interactions/nonbonded_tab.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/openmpi-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/nonbonded_interactions/nonbonded_tab.cpp.o -c /builddir/build/BUILD/espresso/src/core/nonbonded_interactions/nonbonded_tab.cpp [ 37%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/nonbonded_interactions/soft_sphere.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/openmpi-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/nonbonded_interactions/soft_sphere.cpp.o -c /builddir/build/BUILD/espresso/src/core/nonbonded_interactions/soft_sphere.cpp [ 39%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/nonbonded_interactions/smooth_step.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/openmpi-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/nonbonded_interactions/smooth_step.cpp.o -c /builddir/build/BUILD/espresso/src/core/nonbonded_interactions/smooth_step.cpp [ 39%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/nonbonded_interactions/thole.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/openmpi-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/nonbonded_interactions/thole.cpp.o -c /builddir/build/BUILD/espresso/src/core/nonbonded_interactions/thole.cpp [ 39%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/nonbonded_interactions/wca.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/openmpi-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/nonbonded_interactions/wca.cpp.o -c /builddir/build/BUILD/espresso/src/core/nonbonded_interactions/wca.cpp [ 39%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/object-in-fluid/affinity.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/openmpi-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/object-in-fluid/affinity.cpp.o -c /builddir/build/BUILD/espresso/src/core/object-in-fluid/affinity.cpp [ 40%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/object-in-fluid/membrane_collision.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/openmpi-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/object-in-fluid/membrane_collision.cpp.o -c /builddir/build/BUILD/espresso/src/core/object-in-fluid/membrane_collision.cpp [ 40%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/object-in-fluid/oif_global_forces.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/openmpi-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/object-in-fluid/oif_global_forces.cpp.o -c /builddir/build/BUILD/espresso/src/core/object-in-fluid/oif_global_forces.cpp [ 40%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/object-in-fluid/oif_local_forces.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/openmpi-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/object-in-fluid/oif_local_forces.cpp.o -c /builddir/build/BUILD/espresso/src/core/object-in-fluid/oif_local_forces.cpp [ 40%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/object-in-fluid/out_direction.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/openmpi-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/object-in-fluid/out_direction.cpp.o -c /builddir/build/BUILD/espresso/src/core/object-in-fluid/out_direction.cpp [ 40%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/observables/CylindricalLBFluxDensityProfileAtParticlePositions.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/openmpi-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/observables/CylindricalLBFluxDensityProfileAtParticlePositions.cpp.o -c /builddir/build/BUILD/espresso/src/core/observables/CylindricalLBFluxDensityProfileAtParticlePositions.cpp [ 42%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/observables/CylindricalLBVelocityProfileAtParticlePositions.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/openmpi-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/observables/CylindricalLBVelocityProfileAtParticlePositions.cpp.o -c /builddir/build/BUILD/espresso/src/core/observables/CylindricalLBVelocityProfileAtParticlePositions.cpp [ 42%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/observables/CylindricalLBVelocityProfile.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/openmpi-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/observables/CylindricalLBVelocityProfile.cpp.o -c /builddir/build/BUILD/espresso/src/core/observables/CylindricalLBVelocityProfile.cpp [ 42%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/observables/LBVelocityProfile.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/openmpi-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/observables/LBVelocityProfile.cpp.o -c /builddir/build/BUILD/espresso/src/core/observables/LBVelocityProfile.cpp [ 42%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/virtual_sites/lb_inertialess_tracers.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/openmpi-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/virtual_sites/lb_inertialess_tracers.cpp.o -c /builddir/build/BUILD/espresso/src/core/virtual_sites/lb_inertialess_tracers.cpp [ 42%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/virtual_sites/lb_inertialess_tracers_cuda_interface.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/openmpi-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/virtual_sites/lb_inertialess_tracers_cuda_interface.cpp.o -c /builddir/build/BUILD/espresso/src/core/virtual_sites/lb_inertialess_tracers_cuda_interface.cpp [ 43%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/virtual_sites/virtual_sites_com.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/openmpi-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/virtual_sites/virtual_sites_com.cpp.o -c /builddir/build/BUILD/espresso/src/core/virtual_sites/virtual_sites_com.cpp [ 43%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/virtual_sites/VirtualSitesInertialessTracers.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/openmpi-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/virtual_sites/VirtualSitesInertialessTracers.cpp.o -c /builddir/build/BUILD/espresso/src/core/virtual_sites/VirtualSitesInertialessTracers.cpp [ 43%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/virtual_sites/VirtualSitesRelative.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/openmpi-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/virtual_sites/VirtualSitesRelative.cpp.o -c /builddir/build/BUILD/espresso/src/core/virtual_sites/VirtualSitesRelative.cpp [ 43%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/accumulators/TimeSeries.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/openmpi-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/accumulators/TimeSeries.cpp.o -c /builddir/build/BUILD/espresso/src/core/accumulators/TimeSeries.cpp [ 43%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/observables/PidObservable.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/core && /usr/bin/g++ -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/core/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/profiler/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/openmpi-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/observables/PidObservable.cpp.o -c /builddir/build/BUILD/espresso/src/core/observables/PidObservable.cpp [ 45%] Linking CXX shared library EspressoCore.so cd /builddir/build/BUILD/espresso/openmpi/src/core && /usr/bin/cmake -E cmake_link_script CMakeFiles/EspressoCore.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -pthread -Wl,-rpath,/usr/lib64/python3.9/site-packages/openmpi/espressomd -shared -Wl,-soname,EspressoCore.so -o EspressoCore.so CMakeFiles/EspressoCore.dir/accumulators.cpp.o CMakeFiles/EspressoCore.dir/cells.cpp.o CMakeFiles/EspressoCore.dir/collision.cpp.o CMakeFiles/EspressoCore.dir/comfixed_global.cpp.o CMakeFiles/EspressoCore.dir/communication.cpp.o CMakeFiles/EspressoCore.dir/constraints.cpp.o CMakeFiles/EspressoCore.dir/debug.cpp.o CMakeFiles/EspressoCore.dir/diamond.cpp.o CMakeFiles/EspressoCore.dir/domain_decomposition.cpp.o CMakeFiles/EspressoCore.dir/dpd.cpp.o CMakeFiles/EspressoCore.dir/energy.cpp.o CMakeFiles/EspressoCore.dir/errorhandling.cpp.o CMakeFiles/EspressoCore.dir/EspressoSystemInterface.cpp.o 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CMakeFiles/EspressoCore.dir/nonbonded_interactions/nonbonded_interaction_data.cpp.o CMakeFiles/EspressoCore.dir/nonbonded_interactions/nonbonded_tab.cpp.o CMakeFiles/EspressoCore.dir/nonbonded_interactions/soft_sphere.cpp.o CMakeFiles/EspressoCore.dir/nonbonded_interactions/smooth_step.cpp.o CMakeFiles/EspressoCore.dir/nonbonded_interactions/thole.cpp.o CMakeFiles/EspressoCore.dir/nonbonded_interactions/wca.cpp.o CMakeFiles/EspressoCore.dir/object-in-fluid/affinity.cpp.o CMakeFiles/EspressoCore.dir/object-in-fluid/membrane_collision.cpp.o CMakeFiles/EspressoCore.dir/object-in-fluid/oif_global_forces.cpp.o CMakeFiles/EspressoCore.dir/object-in-fluid/oif_local_forces.cpp.o CMakeFiles/EspressoCore.dir/object-in-fluid/out_direction.cpp.o CMakeFiles/EspressoCore.dir/observables/CylindricalLBFluxDensityProfileAtParticlePositions.cpp.o CMakeFiles/EspressoCore.dir/observables/CylindricalLBVelocityProfileAtParticlePositions.cpp.o 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Scanning dependencies of target H5mdCore make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' /usr/bin/make -f src/core/io/writer/CMakeFiles/H5mdCore.dir/build.make src/core/io/writer/CMakeFiles/H5mdCore.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' [ 45%] Building CXX object src/core/io/writer/CMakeFiles/H5mdCore.dir/h5md_core.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/core/io/writer && /usr/bin/g++ -DH5XX_USE_MPI -DH5mdCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/builddir/build/BUILD/espresso/src/core/io/writer/SYSTEM -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/utils/include -isystem /builddir/build/BUILD/espresso/libs/h5xx -isystem /usr/include/openmpi-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/H5mdCore.dir/h5md_core.cpp.o -c /builddir/build/BUILD/espresso/src/core/io/writer/h5md_core.cpp [ 46%] Linking CXX shared library H5mdCore.so cd /builddir/build/BUILD/espresso/openmpi/src/core/io/writer && /usr/bin/cmake -E cmake_link_script CMakeFiles/H5mdCore.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -pthread -Wl,-rpath,/usr/lib64/python3.9/site-packages/openmpi/espressomd -shared -Wl,-soname,H5mdCore.so -o H5mdCore.so CMakeFiles/H5mdCore.dir/h5md_core.cpp.o ../../EspressoCore.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libboost_filesystem.so ../../../config/EspressoConfig.so /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libboost_mpi.so /usr/lib64/libboost_serialization.so -Wl,-rpath-link,/builddir/build/BUILD/espresso/openmpi/src/pdbparser make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' [ 46%] Built target H5mdCore /usr/bin/make -f src/core/io/reader/CMakeFiles/pdbreader.dir/build.make src/core/io/reader/CMakeFiles/pdbreader.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' cd /builddir/build/BUILD/espresso/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/core/io/reader /builddir/build/BUILD/espresso/openmpi /builddir/build/BUILD/espresso/openmpi/src/core/io/reader /builddir/build/BUILD/espresso/openmpi/src/core/io/reader/CMakeFiles/pdbreader.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/espresso/openmpi/src/core/io/reader/CMakeFiles/pdbreader.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/espresso/openmpi/src/core/io/reader/CMakeFiles/pdbreader.dir/depend.internal". 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Scanning dependencies of target pdbreader make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' /usr/bin/make -f src/core/io/reader/CMakeFiles/pdbreader.dir/build.make src/core/io/reader/CMakeFiles/pdbreader.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' [ 46%] Building CXX object src/core/io/reader/CMakeFiles/pdbreader.dir/readpdb.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/core/io/reader && /usr/bin/g++ -DR123_USE_MULHILO64_C99 -Dpdbreader_EXPORTS -I/builddir/build/BUILD/espresso/src/core/io/reader -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/openmpi-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/pdbreader.dir/readpdb.cpp.o -c /builddir/build/BUILD/espresso/src/core/io/reader/readpdb.cpp [ 46%] Linking CXX shared library pdbreader.so cd /builddir/build/BUILD/espresso/openmpi/src/core/io/reader && /usr/bin/cmake -E cmake_link_script CMakeFiles/pdbreader.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -pthread -Wl,-rpath,/usr/lib64/python3.9/site-packages/openmpi/espressomd -shared -Wl,-soname,pdbreader.so -o pdbreader.so CMakeFiles/pdbreader.dir/readpdb.cpp.o ../../EspressoCore.so ../../../pdbparser/pdbparser.so ../../../config/EspressoConfig.so /usr/lib64/openmpi/lib/libboost_mpi.so /usr/lib64/libboost_serialization.so /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' [ 46%] Built target pdbreader /usr/bin/make -f src/core/io/mpiio/CMakeFiles/mpiio.dir/build.make src/core/io/mpiio/CMakeFiles/mpiio.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' cd /builddir/build/BUILD/espresso/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/core/io/mpiio /builddir/build/BUILD/espresso/openmpi /builddir/build/BUILD/espresso/openmpi/src/core/io/mpiio /builddir/build/BUILD/espresso/openmpi/src/core/io/mpiio/CMakeFiles/mpiio.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/espresso/openmpi/src/core/io/mpiio/CMakeFiles/mpiio.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/espresso/openmpi/src/core/io/mpiio/CMakeFiles/mpiio.dir/depend.internal". 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Scanning dependencies of target mpiio make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' /usr/bin/make -f src/core/io/mpiio/CMakeFiles/mpiio.dir/build.make src/core/io/mpiio/CMakeFiles/mpiio.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' [ 46%] Building CXX object src/core/io/mpiio/CMakeFiles/mpiio.dir/mpiio.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/core/io/mpiio && /usr/bin/g++ -DR123_USE_MULHILO64_C99 -Dmpiio_EXPORTS -I/builddir/build/BUILD/espresso/src/core/io/mpiio -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/utils/include -isystem /usr/include/openmpi-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/mpiio.dir/mpiio.cpp.o -c /builddir/build/BUILD/espresso/src/core/io/mpiio/mpiio.cpp [ 46%] Linking CXX shared library mpiio.so cd /builddir/build/BUILD/espresso/openmpi/src/core/io/mpiio && /usr/bin/cmake -E cmake_link_script CMakeFiles/mpiio.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -pthread -Wl,-rpath,/usr/lib64/python3.9/site-packages/openmpi/espressomd -shared -Wl,-soname,mpiio.so -o mpiio.so CMakeFiles/mpiio.dir/mpiio.cpp.o ../../EspressoCore.so ../../../config/EspressoConfig.so /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libboost_mpi.so /usr/lib64/libboost_serialization.so -Wl,-rpath-link,/builddir/build/BUILD/espresso/openmpi/src/pdbparser make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' [ 46%] Built target mpiio /usr/bin/make -f src/core/shapes/CMakeFiles/Shapes.dir/build.make src/core/shapes/CMakeFiles/Shapes.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' cd /builddir/build/BUILD/espresso/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/core/shapes /builddir/build/BUILD/espresso/openmpi /builddir/build/BUILD/espresso/openmpi/src/core/shapes /builddir/build/BUILD/espresso/openmpi/src/core/shapes/CMakeFiles/Shapes.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/espresso/openmpi/src/core/shapes/CMakeFiles/Shapes.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/espresso/openmpi/src/core/shapes/CMakeFiles/Shapes.dir/depend.internal". 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-specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/Shapes.dir/Cylinder.cpp.o -c /builddir/build/BUILD/espresso/src/core/shapes/Cylinder.cpp [ 48%] Building CXX object src/core/shapes/CMakeFiles/Shapes.dir/Ellipsoid.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/core/shapes && /usr/bin/g++ -DR123_USE_MULHILO64_C99 -DShapes_EXPORTS -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/utils/include -isystem /usr/include/openmpi-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/Shapes.dir/Ellipsoid.cpp.o -c /builddir/build/BUILD/espresso/src/core/shapes/Ellipsoid.cpp [ 48%] Building CXX object src/core/shapes/CMakeFiles/Shapes.dir/HollowCone.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/core/shapes && /usr/bin/g++ -DR123_USE_MULHILO64_C99 -DShapes_EXPORTS -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/utils/include -isystem /usr/include/openmpi-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/Shapes.dir/HollowCone.cpp.o -c /builddir/build/BUILD/espresso/src/core/shapes/HollowCone.cpp [ 48%] Building CXX object src/core/shapes/CMakeFiles/Shapes.dir/Rhomboid.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/core/shapes && /usr/bin/g++ 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[ 48%] Building CXX object src/core/shapes/CMakeFiles/Shapes.dir/SimplePore.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/core/shapes && /usr/bin/g++ -DR123_USE_MULHILO64_C99 -DShapes_EXPORTS -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/utils/include -isystem /usr/include/openmpi-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered 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-fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/Shapes.dir/Slitpore.cpp.o -c /builddir/build/BUILD/espresso/src/core/shapes/Slitpore.cpp [ 50%] Building CXX object src/core/shapes/CMakeFiles/Shapes.dir/Sphere.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/core/shapes && /usr/bin/g++ -DR123_USE_MULHILO64_C99 -DShapes_EXPORTS -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/utils/include -isystem /usr/include/openmpi-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/Shapes.dir/Sphere.cpp.o -c /builddir/build/BUILD/espresso/src/core/shapes/Sphere.cpp [ 50%] Building CXX object src/core/shapes/CMakeFiles/Shapes.dir/SpheroCylinder.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/core/shapes && /usr/bin/g++ -DR123_USE_MULHILO64_C99 -DShapes_EXPORTS -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/utils/include -isystem /usr/include/openmpi-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/Shapes.dir/SpheroCylinder.cpp.o -c /builddir/build/BUILD/espresso/src/core/shapes/SpheroCylinder.cpp [ 50%] Building CXX object src/core/shapes/CMakeFiles/Shapes.dir/Stomatocyte.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/core/shapes && /usr/bin/g++ -DR123_USE_MULHILO64_C99 -DShapes_EXPORTS -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/utils/include -isystem /usr/include/openmpi-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/Shapes.dir/Stomatocyte.cpp.o -c /builddir/build/BUILD/espresso/src/core/shapes/Stomatocyte.cpp [ 50%] Building CXX object src/core/shapes/CMakeFiles/Shapes.dir/Torus.cpp.o cd 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CMakeFiles/Shapes.dir/Torus.cpp.o -c /builddir/build/BUILD/espresso/src/core/shapes/Torus.cpp [ 51%] Building CXX object src/core/shapes/CMakeFiles/Shapes.dir/Wall.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/core/shapes && /usr/bin/g++ -DR123_USE_MULHILO64_C99 -DShapes_EXPORTS -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/utils/include -isystem /usr/include/openmpi-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/Shapes.dir/Wall.cpp.o -c /builddir/build/BUILD/espresso/src/core/shapes/Wall.cpp [ 51%] Linking CXX shared library Shapes.so cd /builddir/build/BUILD/espresso/openmpi/src/core/shapes && /usr/bin/cmake -E cmake_link_script CMakeFiles/Shapes.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -pthread -Wl,-rpath,/usr/lib64/python3.9/site-packages/openmpi/espressomd -shared -Wl,-soname,Shapes.so -o Shapes.so CMakeFiles/Shapes.dir/Cylinder.cpp.o CMakeFiles/Shapes.dir/Ellipsoid.cpp.o CMakeFiles/Shapes.dir/HollowCone.cpp.o CMakeFiles/Shapes.dir/Rhomboid.cpp.o CMakeFiles/Shapes.dir/SimplePore.cpp.o CMakeFiles/Shapes.dir/Slitpore.cpp.o CMakeFiles/Shapes.dir/Sphere.cpp.o CMakeFiles/Shapes.dir/SpheroCylinder.cpp.o CMakeFiles/Shapes.dir/Stomatocyte.cpp.o CMakeFiles/Shapes.dir/Torus.cpp.o CMakeFiles/Shapes.dir/Wall.cpp.o ../EspressoCore.so ../../config/EspressoConfig.so /usr/lib64/openmpi/lib/libboost_mpi.so /usr/lib64/libboost_serialization.so /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so -Wl,-rpath-link,/builddir/build/BUILD/espresso/openmpi/src/pdbparser make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' [ 51%] Built target Shapes /usr/bin/make -f src/core/cluster_analysis/CMakeFiles/core_cluster_analysis.dir/build.make src/core/cluster_analysis/CMakeFiles/core_cluster_analysis.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' cd /builddir/build/BUILD/espresso/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/core/cluster_analysis /builddir/build/BUILD/espresso/openmpi /builddir/build/BUILD/espresso/openmpi/src/core/cluster_analysis /builddir/build/BUILD/espresso/openmpi/src/core/cluster_analysis/CMakeFiles/core_cluster_analysis.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/espresso/openmpi/src/core/cluster_analysis/CMakeFiles/core_cluster_analysis.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/espresso/openmpi/src/core/cluster_analysis/CMakeFiles/core_cluster_analysis.dir/depend.internal". 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Scanning dependencies of target core_cluster_analysis make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' /usr/bin/make -f src/core/cluster_analysis/CMakeFiles/core_cluster_analysis.dir/build.make src/core/cluster_analysis/CMakeFiles/core_cluster_analysis.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' [ 51%] Building CXX object src/core/cluster_analysis/CMakeFiles/core_cluster_analysis.dir/Cluster.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/core/cluster_analysis && /usr/bin/g++ -DR123_USE_MULHILO64_C99 -Dcore_cluster_analysis_EXPORTS -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/utils/include -isystem /usr/include/openmpi-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/core_cluster_analysis.dir/Cluster.cpp.o -c /builddir/build/BUILD/espresso/src/core/cluster_analysis/Cluster.cpp [ 51%] Building CXX object src/core/cluster_analysis/CMakeFiles/core_cluster_analysis.dir/ClusterStructure.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/core/cluster_analysis && /usr/bin/g++ -DR123_USE_MULHILO64_C99 -Dcore_cluster_analysis_EXPORTS -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/utils/include -isystem /usr/include/openmpi-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/core_cluster_analysis.dir/ClusterStructure.cpp.o -c /builddir/build/BUILD/espresso/src/core/cluster_analysis/ClusterStructure.cpp [ 53%] Linking CXX shared library core_cluster_analysis.so cd /builddir/build/BUILD/espresso/openmpi/src/core/cluster_analysis && 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../../config/EspressoConfig.so /usr/lib64/libgsl.so /usr/lib64/libgslcblas.so /usr/lib64/openmpi/lib/libboost_mpi.so /usr/lib64/libboost_serialization.so /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so -Wl,-rpath-link,/builddir/build/BUILD/espresso/openmpi/src/pdbparser make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' [ 53%] Built target core_cluster_analysis /usr/bin/make -f src/script_interface/CMakeFiles/EspressoScriptInterface.dir/build.make src/script_interface/CMakeFiles/EspressoScriptInterface.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' cd /builddir/build/BUILD/espresso/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/script_interface /builddir/build/BUILD/espresso/openmpi /builddir/build/BUILD/espresso/openmpi/src/script_interface 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-Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoScriptInterface.dir/initialize.cpp.o -c /builddir/build/BUILD/espresso/src/script_interface/initialize.cpp [ 53%] Building CXX object src/script_interface/CMakeFiles/EspressoScriptInterface.dir/collision_detection/initialize.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/script_interface && /usr/bin/g++ -DEspressoScriptInterface_EXPORTS -DH5XX_USE_MPI -DR123_USE_MULHILO64_C99 -I/builddir/build/BUILD/espresso/src -I/builddir/build/BUILD/espresso/src/script_interface -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/core/io/mpiio -I/builddir/build/BUILD/espresso/src/core/io/reader -I/builddir/build/BUILD/espresso/src/pdbparser/include -I/builddir/build/BUILD/espresso/src/core/io/writer/SYSTEM -isystem /usr/include/openmpi-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -isystem /builddir/build/BUILD/espresso/libs/h5xx -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter 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-I/builddir/build/BUILD/espresso/src/pdbparser/include -I/builddir/build/BUILD/espresso/src/core/io/writer/SYSTEM -isystem /usr/include/openmpi-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -isystem /builddir/build/BUILD/espresso/libs/h5xx -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoScriptInterface.dir/constraints/initialize.cpp.o -c /builddir/build/BUILD/espresso/src/script_interface/constraints/initialize.cpp [ 54%] Building 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-Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoScriptInterface.dir/cluster_analysis/initialize.cpp.o -c /builddir/build/BUILD/espresso/src/script_interface/cluster_analysis/initialize.cpp [ 54%] Building CXX object src/script_interface/CMakeFiles/EspressoScriptInterface.dir/lbboundaries/initialize.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/script_interface && /usr/bin/g++ -DEspressoScriptInterface_EXPORTS -DH5XX_USE_MPI -DR123_USE_MULHILO64_C99 -I/builddir/build/BUILD/espresso/src -I/builddir/build/BUILD/espresso/src/script_interface -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/core/io/mpiio -I/builddir/build/BUILD/espresso/src/core/io/reader -I/builddir/build/BUILD/espresso/src/pdbparser/include -I/builddir/build/BUILD/espresso/src/core/io/writer/SYSTEM -isystem /usr/include/openmpi-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -isystem /builddir/build/BUILD/espresso/libs/h5xx -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoScriptInterface.dir/lbboundaries/initialize.cpp.o -c /builddir/build/BUILD/espresso/src/script_interface/lbboundaries/initialize.cpp [ 54%] Building CXX object src/script_interface/CMakeFiles/EspressoScriptInterface.dir/virtual_sites/initialize.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/script_interface && /usr/bin/g++ -DEspressoScriptInterface_EXPORTS -DH5XX_USE_MPI -DR123_USE_MULHILO64_C99 -I/builddir/build/BUILD/espresso/src -I/builddir/build/BUILD/espresso/src/script_interface -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/core/io/mpiio 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/builddir/build/BUILD/espresso/src/script_interface/virtual_sites/initialize.cpp [ 54%] Building CXX object src/script_interface/CMakeFiles/EspressoScriptInterface.dir/observables/initialize.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/script_interface && /usr/bin/g++ -DEspressoScriptInterface_EXPORTS -DH5XX_USE_MPI -DR123_USE_MULHILO64_C99 -I/builddir/build/BUILD/espresso/src -I/builddir/build/BUILD/espresso/src/script_interface -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/core/io/mpiio -I/builddir/build/BUILD/espresso/src/core/io/reader -I/builddir/build/BUILD/espresso/src/pdbparser/include -I/builddir/build/BUILD/espresso/src/core/io/writer/SYSTEM -isystem /usr/include/openmpi-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -isystem /builddir/build/BUILD/espresso/libs/h5xx -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoScriptInterface.dir/observables/initialize.cpp.o -c /builddir/build/BUILD/espresso/src/script_interface/observables/initialize.cpp [ 54%] Building CXX object src/script_interface/CMakeFiles/EspressoScriptInterface.dir/pair_criteria/initialize.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/script_interface && /usr/bin/g++ -DEspressoScriptInterface_EXPORTS -DH5XX_USE_MPI -DR123_USE_MULHILO64_C99 -I/builddir/build/BUILD/espresso/src -I/builddir/build/BUILD/espresso/src/script_interface -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/core/io/mpiio -I/builddir/build/BUILD/espresso/src/core/io/reader -I/builddir/build/BUILD/espresso/src/pdbparser/include -I/builddir/build/BUILD/espresso/src/core/io/writer/SYSTEM -isystem /usr/include/openmpi-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -isystem /builddir/build/BUILD/espresso/libs/h5xx -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoScriptInterface.dir/pair_criteria/initialize.cpp.o -c /builddir/build/BUILD/espresso/src/script_interface/pair_criteria/initialize.cpp [ 56%] Building CXX object src/script_interface/CMakeFiles/EspressoScriptInterface.dir/mpiio/initialize.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/script_interface && /usr/bin/g++ -DEspressoScriptInterface_EXPORTS -DH5XX_USE_MPI -DR123_USE_MULHILO64_C99 -I/builddir/build/BUILD/espresso/src -I/builddir/build/BUILD/espresso/src/script_interface -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/core/io/mpiio -I/builddir/build/BUILD/espresso/src/core/io/reader -I/builddir/build/BUILD/espresso/src/pdbparser/include -I/builddir/build/BUILD/espresso/src/core/io/writer/SYSTEM -isystem /usr/include/openmpi-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -isystem /builddir/build/BUILD/espresso/libs/h5xx -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoScriptInterface.dir/mpiio/initialize.cpp.o -c /builddir/build/BUILD/espresso/src/script_interface/mpiio/initialize.cpp [ 56%] Building CXX object src/script_interface/CMakeFiles/EspressoScriptInterface.dir/ScriptInterfaceBase.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/script_interface && /usr/bin/g++ -DEspressoScriptInterface_EXPORTS -DH5XX_USE_MPI -DR123_USE_MULHILO64_C99 -I/builddir/build/BUILD/espresso/src -I/builddir/build/BUILD/espresso/src/script_interface -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/core/io/mpiio -I/builddir/build/BUILD/espresso/src/core/io/reader -I/builddir/build/BUILD/espresso/src/pdbparser/include -I/builddir/build/BUILD/espresso/src/core/io/writer/SYSTEM -isystem /usr/include/openmpi-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -isystem /builddir/build/BUILD/espresso/libs/h5xx -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoScriptInterface.dir/ScriptInterfaceBase.cpp.o -c /builddir/build/BUILD/espresso/src/script_interface/ScriptInterfaceBase.cpp [ 56%] Building CXX object src/script_interface/CMakeFiles/EspressoScriptInterface.dir/shapes/initialize.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/script_interface && /usr/bin/g++ -DEspressoScriptInterface_EXPORTS -DH5XX_USE_MPI -DR123_USE_MULHILO64_C99 -I/builddir/build/BUILD/espresso/src -I/builddir/build/BUILD/espresso/src/script_interface -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/core/io/mpiio -I/builddir/build/BUILD/espresso/src/core/io/reader -I/builddir/build/BUILD/espresso/src/pdbparser/include -I/builddir/build/BUILD/espresso/src/core/io/writer/SYSTEM -isystem /usr/include/openmpi-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -isystem /builddir/build/BUILD/espresso/libs/h5xx -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoScriptInterface.dir/shapes/initialize.cpp.o -c /builddir/build/BUILD/espresso/src/script_interface/shapes/initialize.cpp [ 56%] Building CXX object src/script_interface/CMakeFiles/EspressoScriptInterface.dir/ParallelScriptInterface.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/script_interface && /usr/bin/g++ -DEspressoScriptInterface_EXPORTS -DH5XX_USE_MPI -DR123_USE_MULHILO64_C99 -I/builddir/build/BUILD/espresso/src -I/builddir/build/BUILD/espresso/src/script_interface -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/core/io/mpiio -I/builddir/build/BUILD/espresso/src/core/io/reader -I/builddir/build/BUILD/espresso/src/pdbparser/include -I/builddir/build/BUILD/espresso/src/core/io/writer/SYSTEM -isystem /usr/include/openmpi-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -isystem /builddir/build/BUILD/espresso/libs/h5xx -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoScriptInterface.dir/ParallelScriptInterface.cpp.o -c /builddir/build/BUILD/espresso/src/script_interface/ParallelScriptInterface.cpp [ 56%] Building CXX object src/script_interface/CMakeFiles/EspressoScriptInterface.dir/h5md/initialize.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/script_interface && /usr/bin/g++ -DEspressoScriptInterface_EXPORTS -DH5XX_USE_MPI -DR123_USE_MULHILO64_C99 -I/builddir/build/BUILD/espresso/src -I/builddir/build/BUILD/espresso/src/script_interface -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/core/io/mpiio -I/builddir/build/BUILD/espresso/src/core/io/reader -I/builddir/build/BUILD/espresso/src/pdbparser/include -I/builddir/build/BUILD/espresso/src/core/io/writer/SYSTEM -isystem /usr/include/openmpi-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -isystem /builddir/build/BUILD/espresso/libs/h5xx -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoScriptInterface.dir/h5md/initialize.cpp.o -c /builddir/build/BUILD/espresso/src/script_interface/h5md/initialize.cpp [ 57%] Building CXX object src/script_interface/CMakeFiles/EspressoScriptInterface.dir/h5md/h5md.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/script_interface && /usr/bin/g++ -DEspressoScriptInterface_EXPORTS -DH5XX_USE_MPI -DR123_USE_MULHILO64_C99 -I/builddir/build/BUILD/espresso/src -I/builddir/build/BUILD/espresso/src/script_interface -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/core/io/mpiio -I/builddir/build/BUILD/espresso/src/core/io/reader -I/builddir/build/BUILD/espresso/src/pdbparser/include -I/builddir/build/BUILD/espresso/src/core/io/writer/SYSTEM -isystem /usr/include/openmpi-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -isystem /builddir/build/BUILD/espresso/libs/h5xx -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoScriptInterface.dir/h5md/h5md.cpp.o -c /builddir/build/BUILD/espresso/src/script_interface/h5md/h5md.cpp [ 57%] Linking CXX shared library EspressoScriptInterface.so cd /builddir/build/BUILD/espresso/openmpi/src/script_interface && /usr/bin/cmake -E cmake_link_script CMakeFiles/EspressoScriptInterface.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -pthread -Wl,-rpath,/usr/lib64/python3.9/site-packages/openmpi/espressomd -shared -Wl,-soname,EspressoScriptInterface.so -o EspressoScriptInterface.so CMakeFiles/EspressoScriptInterface.dir/accumulators/initialize.cpp.o CMakeFiles/EspressoScriptInterface.dir/initialize.cpp.o CMakeFiles/EspressoScriptInterface.dir/collision_detection/initialize.cpp.o CMakeFiles/EspressoScriptInterface.dir/constraints/initialize.cpp.o CMakeFiles/EspressoScriptInterface.dir/cluster_analysis/initialize.cpp.o CMakeFiles/EspressoScriptInterface.dir/lbboundaries/initialize.cpp.o CMakeFiles/EspressoScriptInterface.dir/virtual_sites/initialize.cpp.o CMakeFiles/EspressoScriptInterface.dir/observables/initialize.cpp.o CMakeFiles/EspressoScriptInterface.dir/pair_criteria/initialize.cpp.o CMakeFiles/EspressoScriptInterface.dir/mpiio/initialize.cpp.o CMakeFiles/EspressoScriptInterface.dir/ScriptInterfaceBase.cpp.o CMakeFiles/EspressoScriptInterface.dir/shapes/initialize.cpp.o CMakeFiles/EspressoScriptInterface.dir/ParallelScriptInterface.cpp.o CMakeFiles/EspressoScriptInterface.dir/h5md/initialize.cpp.o CMakeFiles/EspressoScriptInterface.dir/h5md/h5md.cpp.o ../core/shapes/Shapes.so ../core/cluster_analysis/core_cluster_analysis.so ../core/io/mpiio/mpiio.so ../core/io/reader/pdbreader.so ../core/io/writer/H5mdCore.so ../core/EspressoCore.so ../config/EspressoConfig.so /usr/lib64/openmpi/lib/libboost_mpi.so /usr/lib64/libboost_serialization.so ../pdbparser/pdbparser.so /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libboost_filesystem.so make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' [ 57%] Built target EspressoScriptInterface /usr/bin/make -f src/python/object_in_fluid/CMakeFiles/object_in_fluid.dir/build.make src/python/object_in_fluid/CMakeFiles/object_in_fluid.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' cd /builddir/build/BUILD/espresso/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/object_in_fluid /builddir/build/BUILD/espresso/openmpi /builddir/build/BUILD/espresso/openmpi/src/python/object_in_fluid /builddir/build/BUILD/espresso/openmpi/src/python/object_in_fluid/CMakeFiles/object_in_fluid.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/espresso/openmpi/src/python/object_in_fluid/CMakeFiles/object_in_fluid.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/espresso/openmpi/src/python/object_in_fluid/CMakeFiles/object_in_fluid.dir/depend.internal". Dependee "/builddir/build/BUILD/espresso/openmpi/src/python/object_in_fluid/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/espresso/openmpi/src/python/object_in_fluid/CMakeFiles/object_in_fluid.dir/depend.internal". Scanning dependencies of target object_in_fluid make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' /usr/bin/make -f src/python/object_in_fluid/CMakeFiles/object_in_fluid.dir/build.make src/python/object_in_fluid/CMakeFiles/object_in_fluid.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' cd /builddir/build/BUILD/espresso/openmpi/src/python/object_in_fluid && /usr/bin/cmake -E copy /builddir/build/BUILD/espresso/src/python/object_in_fluid/__init__.py /builddir/build/BUILD/espresso/openmpi/src/python/object_in_fluid//__init__.py cd /builddir/build/BUILD/espresso/openmpi/src/python/object_in_fluid && /usr/bin/cmake -E copy /builddir/build/BUILD/espresso/src/python/object_in_fluid/oif_classes.py /builddir/build/BUILD/espresso/openmpi/src/python/object_in_fluid//oif_classes.py cd /builddir/build/BUILD/espresso/openmpi/src/python/object_in_fluid && /usr/bin/cmake -E copy /builddir/build/BUILD/espresso/src/python/object_in_fluid/oif_utils.py /builddir/build/BUILD/espresso/openmpi/src/python/object_in_fluid//oif_utils.py make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' [ 57%] Built target object_in_fluid /usr/bin/make -f src/python/espressomd/CMakeFiles/gen_pxiconfig.dir/build.make src/python/espressomd/CMakeFiles/gen_pxiconfig.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' [ 59%] Generating gen_pxiconfig.cpp cd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd && /usr/bin/python3 /builddir/build/BUILD/espresso/src/python/espressomd/gen_pxiconfig.py /builddir/build/BUILD/espresso/src/config/features.def /builddir/build/BUILD/espresso/openmpi/src/python/espressomd/gen_pxiconfig.cpp Reading definitions from /builddir/build/BUILD/espresso/src/config/features.def... Done. Writing /builddir/build/BUILD/espresso/openmpi/src/python/espressomd/gen_pxiconfig.cpp... Done. cd /builddir/build/BUILD/espresso/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/espressomd /builddir/build/BUILD/espresso/openmpi /builddir/build/BUILD/espresso/openmpi/src/python/espressomd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/gen_pxiconfig.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/gen_pxiconfig.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/gen_pxiconfig.dir/depend.internal". Dependee "/builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/gen_pxiconfig.dir/depend.internal". Scanning dependencies of target gen_pxiconfig make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' /usr/bin/make -f src/python/espressomd/CMakeFiles/gen_pxiconfig.dir/build.make src/python/espressomd/CMakeFiles/gen_pxiconfig.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' [ 59%] Building CXX object src/python/espressomd/CMakeFiles/gen_pxiconfig.dir/gen_pxiconfig.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd && /usr/bin/g++ -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/openmpi/src/config -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -std=c++14 -o CMakeFiles/gen_pxiconfig.dir/gen_pxiconfig.cpp.o -c /builddir/build/BUILD/espresso/openmpi/src/python/espressomd/gen_pxiconfig.cpp [ 59%] Linking CXX executable gen_pxiconfig cd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd && /usr/bin/cmake -E cmake_link_script CMakeFiles/gen_pxiconfig.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -Wl,-rpath,/usr/lib64/python3.9/site-packages/openmpi/espressomd CMakeFiles/gen_pxiconfig.dir/gen_pxiconfig.cpp.o -o gen_pxiconfig ../../config/EspressoConfig.so make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' [ 59%] Built target gen_pxiconfig /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_thermostat.dir/build.make src/python/espressomd/CMakeFiles/espressomd_thermostat.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' [ 59%] Generating myconfig.pxi cd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd && ./gen_pxiconfig > /builddir/build/BUILD/espresso/openmpi/src/python/espressomd/myconfig.pxi [ 59%] Generating thermostat.cpp cd /builddir/build/BUILD/espresso/openmpi/src/python && /usr/bin/cython -3 --cplus --directive embedsignature=True --directive binding=True -I /builddir/build/BUILD/espresso/src/python/espressomd -I /builddir/build/BUILD/espresso/openmpi/src/python/espressomd /builddir/build/BUILD/espresso/src/python/espressomd/thermostat.pyx -o /builddir/build/BUILD/espresso/openmpi/src/python/espressomd/thermostat.cpp cd /builddir/build/BUILD/espresso/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/espressomd /builddir/build/BUILD/espresso/openmpi /builddir/build/BUILD/espresso/openmpi/src/python/espressomd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/espressomd_thermostat.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/espressomd_thermostat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/espressomd_thermostat.dir/depend.internal". Dependee "/builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/espressomd_thermostat.dir/depend.internal". Scanning dependencies of target espressomd_thermostat make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_thermostat.dir/build.make src/python/espressomd/CMakeFiles/espressomd_thermostat.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' [ 60%] Building CXX object src/python/espressomd/CMakeFiles/espressomd_thermostat.dir/thermostat.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd && /usr/bin/g++ -DR123_USE_MULHILO64_C99 -Despressomd_thermostat_EXPORTS -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/script_interface -I/builddir/build/BUILD/espresso/src/core/io/mpiio -I/builddir/build/BUILD/espresso/src/core/io/reader -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/python3.9 -isystem /usr/lib64/python3.9/site-packages/numpy/core/include -isystem /usr/include/openmpi-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -Wno-pedantic -Wno-cpp -Wno-strict-aliasing -Wno-maybe-uninitialized -Wno-unused-variable -o CMakeFiles/espressomd_thermostat.dir/thermostat.cpp.o -c /builddir/build/BUILD/espresso/openmpi/src/python/espressomd/thermostat.cpp [ 60%] Linking CXX shared library thermostat.so cd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd && /usr/bin/cmake -E cmake_link_script CMakeFiles/espressomd_thermostat.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -pthread -Wl,-rpath,/usr/lib64/python3.9/site-packages/openmpi/espressomd -shared -Wl,-soname,thermostat.so -o thermostat.so CMakeFiles/espressomd_thermostat.dir/thermostat.cpp.o ../../script_interface/EspressoScriptInterface.so ../../core/shapes/Shapes.so ../../core/cluster_analysis/core_cluster_analysis.so ../../core/io/mpiio/mpiio.so ../../core/io/reader/pdbreader.so ../../core/EspressoCore.so ../../config/EspressoConfig.so /usr/lib64/openmpi/lib/libboost_mpi.so /usr/lib64/libboost_serialization.so ../../pdbparser/pdbparser.so /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so -Wl,-rpath-link,/builddir/build/BUILD/espresso/openmpi/src/core/io/writer:/usr/lib64/openmpi/lib make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' [ 60%] Built target espressomd_thermostat /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_code_info.dir/build.make src/python/espressomd/CMakeFiles/espressomd_code_info.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' [ 60%] Generating code_info.pyx cd /builddir/build/BUILD/espresso/src/python/espressomd && /usr/bin/python3 gen_code_info.py /builddir/build/BUILD/espresso/src/config/features.def /builddir/build/BUILD/espresso/openmpi/src/python/espressomd/code_info.pyx Reading definitions from /builddir/build/BUILD/espresso/src/config/features.def... Done. Writing /builddir/build/BUILD/espresso/openmpi/src/python/espressomd/code_info.pyx... Done. [ 60%] Generating code_info.cpp cd /builddir/build/BUILD/espresso/openmpi/src/python && /usr/bin/cython -3 --cplus --directive embedsignature=True --directive binding=True -I /builddir/build/BUILD/espresso/src/python/espressomd -I /builddir/build/BUILD/espresso/openmpi/src/python/espressomd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd/code_info.pyx -o /builddir/build/BUILD/espresso/openmpi/src/python/espressomd/code_info.cpp cd /builddir/build/BUILD/espresso/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/espressomd /builddir/build/BUILD/espresso/openmpi /builddir/build/BUILD/espresso/openmpi/src/python/espressomd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/espressomd_code_info.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/espressomd_code_info.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/espressomd_code_info.dir/depend.internal". Dependee "/builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/espressomd_code_info.dir/depend.internal". Scanning dependencies of target espressomd_code_info make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_code_info.dir/build.make src/python/espressomd/CMakeFiles/espressomd_code_info.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' [ 62%] Building CXX object src/python/espressomd/CMakeFiles/espressomd_code_info.dir/code_info.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd && /usr/bin/g++ -DR123_USE_MULHILO64_C99 -Despressomd_code_info_EXPORTS -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/script_interface -I/builddir/build/BUILD/espresso/src/core/io/mpiio -I/builddir/build/BUILD/espresso/src/core/io/reader -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/python3.9 -isystem /usr/lib64/python3.9/site-packages/numpy/core/include -isystem /usr/include/openmpi-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -Wno-pedantic -Wno-cpp -Wno-strict-aliasing -Wno-maybe-uninitialized -Wno-unused-variable -o CMakeFiles/espressomd_code_info.dir/code_info.cpp.o -c /builddir/build/BUILD/espresso/openmpi/src/python/espressomd/code_info.cpp [ 62%] Linking CXX shared library code_info.so cd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd && /usr/bin/cmake -E cmake_link_script CMakeFiles/espressomd_code_info.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -pthread -Wl,-rpath,/usr/lib64/python3.9/site-packages/openmpi/espressomd -shared -Wl,-soname,code_info.so -o code_info.so CMakeFiles/espressomd_code_info.dir/code_info.cpp.o ../../script_interface/EspressoScriptInterface.so ../../core/shapes/Shapes.so ../../core/cluster_analysis/core_cluster_analysis.so ../../core/io/mpiio/mpiio.so ../../core/io/reader/pdbreader.so ../../core/EspressoCore.so ../../config/EspressoConfig.so /usr/lib64/openmpi/lib/libboost_mpi.so /usr/lib64/libboost_serialization.so ../../pdbparser/pdbparser.so /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so -Wl,-rpath-link,/builddir/build/BUILD/espresso/openmpi/src/core/io/writer:/usr/lib64/openmpi/lib make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' [ 62%] Built target espressomd_code_info /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_visualization_opengl.dir/build.make src/python/espressomd/CMakeFiles/espressomd_visualization_opengl.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' [ 62%] Generating visualization_opengl.cpp cd /builddir/build/BUILD/espresso/openmpi/src/python && /usr/bin/cython -3 --cplus --directive embedsignature=True --directive binding=True -I /builddir/build/BUILD/espresso/src/python/espressomd -I /builddir/build/BUILD/espresso/openmpi/src/python/espressomd /builddir/build/BUILD/espresso/src/python/espressomd/visualization_opengl.pyx -o /builddir/build/BUILD/espresso/openmpi/src/python/espressomd/visualization_opengl.cpp cd /builddir/build/BUILD/espresso/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/espressomd /builddir/build/BUILD/espresso/openmpi /builddir/build/BUILD/espresso/openmpi/src/python/espressomd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/espressomd_visualization_opengl.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/espressomd_visualization_opengl.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/espressomd_visualization_opengl.dir/depend.internal". Dependee "/builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/espressomd_visualization_opengl.dir/depend.internal". Scanning dependencies of target espressomd_visualization_opengl make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_visualization_opengl.dir/build.make src/python/espressomd/CMakeFiles/espressomd_visualization_opengl.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' [ 62%] Building CXX object src/python/espressomd/CMakeFiles/espressomd_visualization_opengl.dir/visualization_opengl.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd && /usr/bin/g++ -DR123_USE_MULHILO64_C99 -Despressomd_visualization_opengl_EXPORTS -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/script_interface -I/builddir/build/BUILD/espresso/src/core/io/mpiio -I/builddir/build/BUILD/espresso/src/core/io/reader -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/python3.9 -isystem /usr/lib64/python3.9/site-packages/numpy/core/include -isystem /usr/include/openmpi-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -Wno-pedantic -Wno-cpp -Wno-strict-aliasing -Wno-maybe-uninitialized -Wno-unused-variable -o CMakeFiles/espressomd_visualization_opengl.dir/visualization_opengl.cpp.o -c /builddir/build/BUILD/espresso/openmpi/src/python/espressomd/visualization_opengl.cpp [ 62%] Linking CXX shared library visualization_opengl.so cd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd && /usr/bin/cmake -E cmake_link_script CMakeFiles/espressomd_visualization_opengl.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -pthread -Wl,-rpath,/usr/lib64/python3.9/site-packages/openmpi/espressomd -shared -Wl,-soname,visualization_opengl.so -o visualization_opengl.so CMakeFiles/espressomd_visualization_opengl.dir/visualization_opengl.cpp.o ../../script_interface/EspressoScriptInterface.so ../../core/shapes/Shapes.so ../../core/cluster_analysis/core_cluster_analysis.so ../../core/io/mpiio/mpiio.so ../../core/io/reader/pdbreader.so ../../core/EspressoCore.so ../../config/EspressoConfig.so /usr/lib64/openmpi/lib/libboost_mpi.so /usr/lib64/libboost_serialization.so ../../pdbparser/pdbparser.so /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so -Wl,-rpath-link,/builddir/build/BUILD/espresso/openmpi/src/core/io/writer:/usr/lib64/openmpi/lib make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' [ 64%] Built target espressomd_visualization_opengl /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_visualization_mayavi.dir/build.make src/python/espressomd/CMakeFiles/espressomd_visualization_mayavi.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' [ 65%] Generating visualization_mayavi.cpp cd /builddir/build/BUILD/espresso/openmpi/src/python && /usr/bin/cython -3 --cplus --directive embedsignature=True --directive binding=True -I /builddir/build/BUILD/espresso/src/python/espressomd -I /builddir/build/BUILD/espresso/openmpi/src/python/espressomd /builddir/build/BUILD/espresso/src/python/espressomd/visualization_mayavi.pyx -o /builddir/build/BUILD/espresso/openmpi/src/python/espressomd/visualization_mayavi.cpp cd /builddir/build/BUILD/espresso/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/espressomd /builddir/build/BUILD/espresso/openmpi /builddir/build/BUILD/espresso/openmpi/src/python/espressomd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/espressomd_visualization_mayavi.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/espressomd_visualization_mayavi.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/espressomd_visualization_mayavi.dir/depend.internal". Dependee "/builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/espressomd_visualization_mayavi.dir/depend.internal". Scanning dependencies of target espressomd_visualization_mayavi make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_visualization_mayavi.dir/build.make src/python/espressomd/CMakeFiles/espressomd_visualization_mayavi.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' [ 65%] Building CXX object src/python/espressomd/CMakeFiles/espressomd_visualization_mayavi.dir/visualization_mayavi.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd && /usr/bin/g++ -DR123_USE_MULHILO64_C99 -Despressomd_visualization_mayavi_EXPORTS -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/script_interface -I/builddir/build/BUILD/espresso/src/core/io/mpiio -I/builddir/build/BUILD/espresso/src/core/io/reader -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/python3.9 -isystem /usr/lib64/python3.9/site-packages/numpy/core/include -isystem /usr/include/openmpi-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -Wno-pedantic -Wno-cpp -Wno-strict-aliasing -Wno-maybe-uninitialized -Wno-unused-variable -o CMakeFiles/espressomd_visualization_mayavi.dir/visualization_mayavi.cpp.o -c /builddir/build/BUILD/espresso/openmpi/src/python/espressomd/visualization_mayavi.cpp [ 65%] Linking CXX shared library visualization_mayavi.so cd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd && /usr/bin/cmake -E cmake_link_script CMakeFiles/espressomd_visualization_mayavi.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -pthread -Wl,-rpath,/usr/lib64/python3.9/site-packages/openmpi/espressomd -shared -Wl,-soname,visualization_mayavi.so -o visualization_mayavi.so CMakeFiles/espressomd_visualization_mayavi.dir/visualization_mayavi.cpp.o ../../script_interface/EspressoScriptInterface.so ../../core/shapes/Shapes.so ../../core/cluster_analysis/core_cluster_analysis.so ../../core/io/mpiio/mpiio.so ../../core/io/reader/pdbreader.so ../../core/EspressoCore.so ../../config/EspressoConfig.so /usr/lib64/openmpi/lib/libboost_mpi.so /usr/lib64/libboost_serialization.so ../../pdbparser/pdbparser.so /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so -Wl,-rpath-link,/builddir/build/BUILD/espresso/openmpi/src/core/io/writer:/usr/lib64/openmpi/lib make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' [ 65%] Built target espressomd_visualization_mayavi /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_visualization.dir/build.make src/python/espressomd/CMakeFiles/espressomd_visualization.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' [ 65%] Generating visualization.cpp cd /builddir/build/BUILD/espresso/openmpi/src/python && /usr/bin/cython -3 --cplus --directive embedsignature=True --directive binding=True -I /builddir/build/BUILD/espresso/src/python/espressomd -I /builddir/build/BUILD/espresso/openmpi/src/python/espressomd /builddir/build/BUILD/espresso/src/python/espressomd/visualization.pyx -o /builddir/build/BUILD/espresso/openmpi/src/python/espressomd/visualization.cpp cd /builddir/build/BUILD/espresso/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/espressomd /builddir/build/BUILD/espresso/openmpi /builddir/build/BUILD/espresso/openmpi/src/python/espressomd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/espressomd_visualization.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/espressomd_visualization.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/espressomd_visualization.dir/depend.internal". Dependee "/builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/espressomd_visualization.dir/depend.internal". Scanning dependencies of target espressomd_visualization make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_visualization.dir/build.make src/python/espressomd/CMakeFiles/espressomd_visualization.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' [ 65%] Building CXX object src/python/espressomd/CMakeFiles/espressomd_visualization.dir/visualization.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd && /usr/bin/g++ -DR123_USE_MULHILO64_C99 -Despressomd_visualization_EXPORTS -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/script_interface -I/builddir/build/BUILD/espresso/src/core/io/mpiio -I/builddir/build/BUILD/espresso/src/core/io/reader -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/python3.9 -isystem /usr/lib64/python3.9/site-packages/numpy/core/include -isystem /usr/include/openmpi-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -Wno-pedantic -Wno-cpp -Wno-strict-aliasing -Wno-maybe-uninitialized -Wno-unused-variable -o CMakeFiles/espressomd_visualization.dir/visualization.cpp.o -c /builddir/build/BUILD/espresso/openmpi/src/python/espressomd/visualization.cpp [ 65%] Linking CXX shared library visualization.so cd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd && /usr/bin/cmake -E cmake_link_script CMakeFiles/espressomd_visualization.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -pthread -Wl,-rpath,/usr/lib64/python3.9/site-packages/openmpi/espressomd -shared -Wl,-soname,visualization.so -o visualization.so CMakeFiles/espressomd_visualization.dir/visualization.cpp.o ../../script_interface/EspressoScriptInterface.so ../../core/shapes/Shapes.so ../../core/cluster_analysis/core_cluster_analysis.so ../../core/io/mpiio/mpiio.so ../../core/io/reader/pdbreader.so ../../core/EspressoCore.so ../../config/EspressoConfig.so /usr/lib64/openmpi/lib/libboost_mpi.so /usr/lib64/libboost_serialization.so ../../pdbparser/pdbparser.so /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so -Wl,-rpath-link,/builddir/build/BUILD/espresso/openmpi/src/core/io/writer:/usr/lib64/openmpi/lib make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' [ 65%] Built target espressomd_visualization /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_version.dir/build.make src/python/espressomd/CMakeFiles/espressomd_version.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' [ 65%] Generating version.cpp cd /builddir/build/BUILD/espresso/openmpi/src/python && /usr/bin/cython -3 --cplus --directive embedsignature=True --directive binding=True -I /builddir/build/BUILD/espresso/src/python/espressomd -I /builddir/build/BUILD/espresso/openmpi/src/python/espressomd /builddir/build/BUILD/espresso/src/python/espressomd/version.pyx -o /builddir/build/BUILD/espresso/openmpi/src/python/espressomd/version.cpp cd /builddir/build/BUILD/espresso/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/espressomd /builddir/build/BUILD/espresso/openmpi /builddir/build/BUILD/espresso/openmpi/src/python/espressomd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/espressomd_version.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/espressomd_version.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/espressomd_version.dir/depend.internal". Dependee "/builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/espressomd_version.dir/depend.internal". Scanning dependencies of target espressomd_version make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_version.dir/build.make src/python/espressomd/CMakeFiles/espressomd_version.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' [ 65%] Building CXX object src/python/espressomd/CMakeFiles/espressomd_version.dir/version.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd && /usr/bin/g++ -DR123_USE_MULHILO64_C99 -Despressomd_version_EXPORTS -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/script_interface -I/builddir/build/BUILD/espresso/src/core/io/mpiio -I/builddir/build/BUILD/espresso/src/core/io/reader -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/python3.9 -isystem /usr/lib64/python3.9/site-packages/numpy/core/include -isystem /usr/include/openmpi-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -Wno-pedantic -Wno-cpp -Wno-strict-aliasing -Wno-maybe-uninitialized -Wno-unused-variable -o CMakeFiles/espressomd_version.dir/version.cpp.o -c /builddir/build/BUILD/espresso/openmpi/src/python/espressomd/version.cpp [ 67%] Linking CXX shared library version.so cd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd && /usr/bin/cmake -E cmake_link_script CMakeFiles/espressomd_version.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -pthread -Wl,-rpath,/usr/lib64/python3.9/site-packages/openmpi/espressomd -shared -Wl,-soname,version.so -o version.so CMakeFiles/espressomd_version.dir/version.cpp.o ../../script_interface/EspressoScriptInterface.so ../../core/shapes/Shapes.so ../../core/cluster_analysis/core_cluster_analysis.so ../../core/io/mpiio/mpiio.so ../../core/io/reader/pdbreader.so ../../core/EspressoCore.so ../../config/EspressoConfig.so /usr/lib64/openmpi/lib/libboost_mpi.so /usr/lib64/libboost_serialization.so ../../pdbparser/pdbparser.so /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so -Wl,-rpath-link,/builddir/build/BUILD/espresso/openmpi/src/core/io/writer:/usr/lib64/openmpi/lib make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' [ 67%] Built target espressomd_version /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_system.dir/build.make src/python/espressomd/CMakeFiles/espressomd_system.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' [ 67%] Generating system.cpp cd /builddir/build/BUILD/espresso/openmpi/src/python && /usr/bin/cython -3 --cplus --directive embedsignature=True --directive binding=True -I /builddir/build/BUILD/espresso/src/python/espressomd -I /builddir/build/BUILD/espresso/openmpi/src/python/espressomd /builddir/build/BUILD/espresso/src/python/espressomd/system.pyx -o /builddir/build/BUILD/espresso/openmpi/src/python/espressomd/system.cpp cd /builddir/build/BUILD/espresso/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/espressomd /builddir/build/BUILD/espresso/openmpi /builddir/build/BUILD/espresso/openmpi/src/python/espressomd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/espressomd_system.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/espressomd_system.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/espressomd_system.dir/depend.internal". Dependee "/builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/espressomd_system.dir/depend.internal". Scanning dependencies of target espressomd_system make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_system.dir/build.make src/python/espressomd/CMakeFiles/espressomd_system.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' [ 67%] Building CXX object src/python/espressomd/CMakeFiles/espressomd_system.dir/system.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd && /usr/bin/g++ -DR123_USE_MULHILO64_C99 -Despressomd_system_EXPORTS -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/script_interface -I/builddir/build/BUILD/espresso/src/core/io/mpiio -I/builddir/build/BUILD/espresso/src/core/io/reader -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/python3.9 -isystem /usr/lib64/python3.9/site-packages/numpy/core/include -isystem /usr/include/openmpi-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -Wno-pedantic -Wno-cpp -Wno-strict-aliasing -Wno-maybe-uninitialized -Wno-unused-variable -o CMakeFiles/espressomd_system.dir/system.cpp.o -c /builddir/build/BUILD/espresso/openmpi/src/python/espressomd/system.cpp [ 67%] Linking CXX shared library system.so cd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd && /usr/bin/cmake -E cmake_link_script CMakeFiles/espressomd_system.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -pthread -Wl,-rpath,/usr/lib64/python3.9/site-packages/openmpi/espressomd -shared -Wl,-soname,system.so -o system.so CMakeFiles/espressomd_system.dir/system.cpp.o ../../script_interface/EspressoScriptInterface.so ../../core/shapes/Shapes.so ../../core/cluster_analysis/core_cluster_analysis.so ../../core/io/mpiio/mpiio.so ../../core/io/reader/pdbreader.so ../../core/EspressoCore.so ../../config/EspressoConfig.so /usr/lib64/openmpi/lib/libboost_mpi.so /usr/lib64/libboost_serialization.so ../../pdbparser/pdbparser.so /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so -Wl,-rpath-link,/builddir/build/BUILD/espresso/openmpi/src/core/io/writer:/usr/lib64/openmpi/lib make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' [ 68%] Built target espressomd_system /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_electrostatic_extensions.dir/build.make src/python/espressomd/CMakeFiles/espressomd_electrostatic_extensions.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' [ 68%] Generating electrostatic_extensions.cpp cd /builddir/build/BUILD/espresso/openmpi/src/python && /usr/bin/cython -3 --cplus --directive embedsignature=True --directive binding=True -I /builddir/build/BUILD/espresso/src/python/espressomd -I /builddir/build/BUILD/espresso/openmpi/src/python/espressomd /builddir/build/BUILD/espresso/src/python/espressomd/electrostatic_extensions.pyx -o /builddir/build/BUILD/espresso/openmpi/src/python/espressomd/electrostatic_extensions.cpp cd /builddir/build/BUILD/espresso/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/espressomd /builddir/build/BUILD/espresso/openmpi /builddir/build/BUILD/espresso/openmpi/src/python/espressomd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/espressomd_electrostatic_extensions.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/espressomd_electrostatic_extensions.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/espressomd_electrostatic_extensions.dir/depend.internal". Dependee "/builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/espressomd_electrostatic_extensions.dir/depend.internal". Scanning dependencies of target espressomd_electrostatic_extensions make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_electrostatic_extensions.dir/build.make src/python/espressomd/CMakeFiles/espressomd_electrostatic_extensions.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' [ 68%] Building CXX object src/python/espressomd/CMakeFiles/espressomd_electrostatic_extensions.dir/electrostatic_extensions.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd && /usr/bin/g++ -DR123_USE_MULHILO64_C99 -Despressomd_electrostatic_extensions_EXPORTS -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/script_interface -I/builddir/build/BUILD/espresso/src/core/io/mpiio -I/builddir/build/BUILD/espresso/src/core/io/reader -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/python3.9 -isystem /usr/lib64/python3.9/site-packages/numpy/core/include -isystem /usr/include/openmpi-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -Wno-pedantic -Wno-cpp -Wno-strict-aliasing -Wno-maybe-uninitialized -Wno-unused-variable -o CMakeFiles/espressomd_electrostatic_extensions.dir/electrostatic_extensions.cpp.o -c /builddir/build/BUILD/espresso/openmpi/src/python/espressomd/electrostatic_extensions.cpp [ 68%] Linking CXX shared library electrostatic_extensions.so cd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd && /usr/bin/cmake -E cmake_link_script CMakeFiles/espressomd_electrostatic_extensions.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -pthread -Wl,-rpath,/usr/lib64/python3.9/site-packages/openmpi/espressomd -shared -Wl,-soname,electrostatic_extensions.so -o electrostatic_extensions.so CMakeFiles/espressomd_electrostatic_extensions.dir/electrostatic_extensions.cpp.o ../../script_interface/EspressoScriptInterface.so ../../core/shapes/Shapes.so ../../core/cluster_analysis/core_cluster_analysis.so ../../core/io/mpiio/mpiio.so ../../core/io/reader/pdbreader.so ../../core/EspressoCore.so ../../config/EspressoConfig.so /usr/lib64/openmpi/lib/libboost_mpi.so /usr/lib64/libboost_serialization.so ../../pdbparser/pdbparser.so /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so -Wl,-rpath-link,/builddir/build/BUILD/espresso/openmpi/src/core/io/writer:/usr/lib64/openmpi/lib make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' [ 70%] Built target espressomd_electrostatic_extensions /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_utils.dir/build.make src/python/espressomd/CMakeFiles/espressomd_utils.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' [ 70%] Generating utils.cpp cd /builddir/build/BUILD/espresso/openmpi/src/python && /usr/bin/cython -3 --cplus --directive embedsignature=True --directive binding=True -I /builddir/build/BUILD/espresso/src/python/espressomd -I /builddir/build/BUILD/espresso/openmpi/src/python/espressomd /builddir/build/BUILD/espresso/src/python/espressomd/utils.pyx -o /builddir/build/BUILD/espresso/openmpi/src/python/espressomd/utils.cpp cd /builddir/build/BUILD/espresso/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/espressomd /builddir/build/BUILD/espresso/openmpi /builddir/build/BUILD/espresso/openmpi/src/python/espressomd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/espressomd_utils.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/espressomd_utils.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/espressomd_utils.dir/depend.internal". Dependee "/builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/espressomd_utils.dir/depend.internal". Scanning dependencies of target espressomd_utils make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_utils.dir/build.make src/python/espressomd/CMakeFiles/espressomd_utils.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' [ 70%] Building CXX object src/python/espressomd/CMakeFiles/espressomd_utils.dir/utils.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd && /usr/bin/g++ -DR123_USE_MULHILO64_C99 -Despressomd_utils_EXPORTS -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/script_interface -I/builddir/build/BUILD/espresso/src/core/io/mpiio -I/builddir/build/BUILD/espresso/src/core/io/reader -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/python3.9 -isystem /usr/lib64/python3.9/site-packages/numpy/core/include -isystem /usr/include/openmpi-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -Wno-pedantic -Wno-cpp -Wno-strict-aliasing -Wno-maybe-uninitialized -Wno-unused-variable -o CMakeFiles/espressomd_utils.dir/utils.cpp.o -c /builddir/build/BUILD/espresso/openmpi/src/python/espressomd/utils.cpp [ 71%] Linking CXX shared library utils.so cd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd && /usr/bin/cmake -E cmake_link_script CMakeFiles/espressomd_utils.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -pthread -Wl,-rpath,/usr/lib64/python3.9/site-packages/openmpi/espressomd -shared -Wl,-soname,utils.so -o utils.so CMakeFiles/espressomd_utils.dir/utils.cpp.o ../../script_interface/EspressoScriptInterface.so ../../core/shapes/Shapes.so ../../core/cluster_analysis/core_cluster_analysis.so ../../core/io/mpiio/mpiio.so ../../core/io/reader/pdbreader.so ../../core/EspressoCore.so ../../config/EspressoConfig.so /usr/lib64/openmpi/lib/libboost_mpi.so /usr/lib64/libboost_serialization.so ../../pdbparser/pdbparser.so /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so -Wl,-rpath-link,/builddir/build/BUILD/espresso/openmpi/src/core/io/writer:/usr/lib64/openmpi/lib make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' [ 71%] Built target espressomd_utils /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_electrokinetics.dir/build.make src/python/espressomd/CMakeFiles/espressomd_electrokinetics.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' [ 73%] Generating electrokinetics.cpp cd /builddir/build/BUILD/espresso/openmpi/src/python && /usr/bin/cython -3 --cplus --directive embedsignature=True --directive binding=True -I /builddir/build/BUILD/espresso/src/python/espressomd -I /builddir/build/BUILD/espresso/openmpi/src/python/espressomd /builddir/build/BUILD/espresso/src/python/espressomd/electrokinetics.pyx -o /builddir/build/BUILD/espresso/openmpi/src/python/espressomd/electrokinetics.cpp cd /builddir/build/BUILD/espresso/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/espressomd /builddir/build/BUILD/espresso/openmpi /builddir/build/BUILD/espresso/openmpi/src/python/espressomd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/espressomd_electrokinetics.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/espressomd_electrokinetics.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/espressomd_electrokinetics.dir/depend.internal". Dependee "/builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/espressomd_electrokinetics.dir/depend.internal". Scanning dependencies of target espressomd_electrokinetics make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_electrokinetics.dir/build.make src/python/espressomd/CMakeFiles/espressomd_electrokinetics.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' [ 73%] Building CXX object src/python/espressomd/CMakeFiles/espressomd_electrokinetics.dir/electrokinetics.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd && /usr/bin/g++ -DR123_USE_MULHILO64_C99 -Despressomd_electrokinetics_EXPORTS -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/script_interface -I/builddir/build/BUILD/espresso/src/core/io/mpiio -I/builddir/build/BUILD/espresso/src/core/io/reader -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/python3.9 -isystem /usr/lib64/python3.9/site-packages/numpy/core/include -isystem /usr/include/openmpi-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -Wno-pedantic -Wno-cpp -Wno-strict-aliasing -Wno-maybe-uninitialized -Wno-unused-variable -o CMakeFiles/espressomd_electrokinetics.dir/electrokinetics.cpp.o -c /builddir/build/BUILD/espresso/openmpi/src/python/espressomd/electrokinetics.cpp [ 73%] Linking CXX shared library electrokinetics.so cd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd && /usr/bin/cmake -E cmake_link_script CMakeFiles/espressomd_electrokinetics.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -pthread -Wl,-rpath,/usr/lib64/python3.9/site-packages/openmpi/espressomd -shared -Wl,-soname,electrokinetics.so -o electrokinetics.so CMakeFiles/espressomd_electrokinetics.dir/electrokinetics.cpp.o ../../script_interface/EspressoScriptInterface.so ../../core/shapes/Shapes.so ../../core/cluster_analysis/core_cluster_analysis.so ../../core/io/mpiio/mpiio.so ../../core/io/reader/pdbreader.so ../../core/EspressoCore.so ../../config/EspressoConfig.so /usr/lib64/openmpi/lib/libboost_mpi.so /usr/lib64/libboost_serialization.so ../../pdbparser/pdbparser.so /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so -Wl,-rpath-link,/builddir/build/BUILD/espresso/openmpi/src/core/io/writer:/usr/lib64/openmpi/lib make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' [ 73%] Built target espressomd_electrokinetics /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_cellsystem.dir/build.make src/python/espressomd/CMakeFiles/espressomd_cellsystem.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' [ 73%] Generating cellsystem.cpp cd /builddir/build/BUILD/espresso/openmpi/src/python && /usr/bin/cython -3 --cplus --directive embedsignature=True --directive binding=True -I /builddir/build/BUILD/espresso/src/python/espressomd -I /builddir/build/BUILD/espresso/openmpi/src/python/espressomd /builddir/build/BUILD/espresso/src/python/espressomd/cellsystem.pyx -o /builddir/build/BUILD/espresso/openmpi/src/python/espressomd/cellsystem.cpp cd /builddir/build/BUILD/espresso/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/espressomd /builddir/build/BUILD/espresso/openmpi /builddir/build/BUILD/espresso/openmpi/src/python/espressomd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/espressomd_cellsystem.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/espressomd_cellsystem.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/espressomd_cellsystem.dir/depend.internal". Dependee "/builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/espressomd_cellsystem.dir/depend.internal". Scanning dependencies of target espressomd_cellsystem make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_cellsystem.dir/build.make src/python/espressomd/CMakeFiles/espressomd_cellsystem.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' [ 75%] Building CXX object src/python/espressomd/CMakeFiles/espressomd_cellsystem.dir/cellsystem.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd && /usr/bin/g++ -DR123_USE_MULHILO64_C99 -Despressomd_cellsystem_EXPORTS -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/script_interface -I/builddir/build/BUILD/espresso/src/core/io/mpiio -I/builddir/build/BUILD/espresso/src/core/io/reader -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/python3.9 -isystem /usr/lib64/python3.9/site-packages/numpy/core/include -isystem /usr/include/openmpi-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -Wno-pedantic -Wno-cpp -Wno-strict-aliasing -Wno-maybe-uninitialized -Wno-unused-variable -o CMakeFiles/espressomd_cellsystem.dir/cellsystem.cpp.o -c /builddir/build/BUILD/espresso/openmpi/src/python/espressomd/cellsystem.cpp [ 75%] Linking CXX shared library cellsystem.so cd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd && /usr/bin/cmake -E cmake_link_script CMakeFiles/espressomd_cellsystem.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -pthread -Wl,-rpath,/usr/lib64/python3.9/site-packages/openmpi/espressomd -shared -Wl,-soname,cellsystem.so -o cellsystem.so CMakeFiles/espressomd_cellsystem.dir/cellsystem.cpp.o ../../script_interface/EspressoScriptInterface.so ../../core/shapes/Shapes.so ../../core/cluster_analysis/core_cluster_analysis.so ../../core/io/mpiio/mpiio.so ../../core/io/reader/pdbreader.so ../../core/EspressoCore.so ../../config/EspressoConfig.so /usr/lib64/openmpi/lib/libboost_mpi.so /usr/lib64/libboost_serialization.so ../../pdbparser/pdbparser.so /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so -Wl,-rpath-link,/builddir/build/BUILD/espresso/openmpi/src/core/io/writer:/usr/lib64/openmpi/lib make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' [ 75%] Built target espressomd_cellsystem /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_electrostatics.dir/build.make src/python/espressomd/CMakeFiles/espressomd_electrostatics.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' [ 75%] Generating electrostatics.cpp cd /builddir/build/BUILD/espresso/openmpi/src/python && /usr/bin/cython -3 --cplus --directive embedsignature=True --directive binding=True -I /builddir/build/BUILD/espresso/src/python/espressomd -I /builddir/build/BUILD/espresso/openmpi/src/python/espressomd /builddir/build/BUILD/espresso/src/python/espressomd/electrostatics.pyx -o /builddir/build/BUILD/espresso/openmpi/src/python/espressomd/electrostatics.cpp cd /builddir/build/BUILD/espresso/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/espressomd /builddir/build/BUILD/espresso/openmpi /builddir/build/BUILD/espresso/openmpi/src/python/espressomd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/espressomd_electrostatics.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/espressomd_electrostatics.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/espressomd_electrostatics.dir/depend.internal". Dependee "/builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/espressomd_electrostatics.dir/depend.internal". Scanning dependencies of target espressomd_electrostatics make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_electrostatics.dir/build.make src/python/espressomd/CMakeFiles/espressomd_electrostatics.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' [ 76%] Building CXX object src/python/espressomd/CMakeFiles/espressomd_electrostatics.dir/electrostatics.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd && /usr/bin/g++ -DR123_USE_MULHILO64_C99 -Despressomd_electrostatics_EXPORTS -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/script_interface -I/builddir/build/BUILD/espresso/src/core/io/mpiio -I/builddir/build/BUILD/espresso/src/core/io/reader -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/python3.9 -isystem /usr/lib64/python3.9/site-packages/numpy/core/include -isystem /usr/include/openmpi-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -Wno-pedantic -Wno-cpp -Wno-strict-aliasing -Wno-maybe-uninitialized -Wno-unused-variable -o CMakeFiles/espressomd_electrostatics.dir/electrostatics.cpp.o -c /builddir/build/BUILD/espresso/openmpi/src/python/espressomd/electrostatics.cpp [ 76%] Linking CXX shared library electrostatics.so cd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd && /usr/bin/cmake -E cmake_link_script CMakeFiles/espressomd_electrostatics.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -pthread -Wl,-rpath,/usr/lib64/python3.9/site-packages/openmpi/espressomd -shared -Wl,-soname,electrostatics.so -o electrostatics.so CMakeFiles/espressomd_electrostatics.dir/electrostatics.cpp.o ../../script_interface/EspressoScriptInterface.so ../../core/shapes/Shapes.so ../../core/cluster_analysis/core_cluster_analysis.so ../../core/io/mpiio/mpiio.so ../../core/io/reader/pdbreader.so ../../core/EspressoCore.so ../../config/EspressoConfig.so /usr/lib64/openmpi/lib/libboost_mpi.so /usr/lib64/libboost_serialization.so ../../pdbparser/pdbparser.so /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so -Wl,-rpath-link,/builddir/build/BUILD/espresso/openmpi/src/core/io/writer:/usr/lib64/openmpi/lib make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' [ 76%] Built target espressomd_electrostatics /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_diamond.dir/build.make src/python/espressomd/CMakeFiles/espressomd_diamond.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' [ 76%] Generating diamond.cpp cd /builddir/build/BUILD/espresso/openmpi/src/python && /usr/bin/cython -3 --cplus --directive embedsignature=True --directive binding=True -I /builddir/build/BUILD/espresso/src/python/espressomd -I /builddir/build/BUILD/espresso/openmpi/src/python/espressomd /builddir/build/BUILD/espresso/src/python/espressomd/diamond.pyx -o /builddir/build/BUILD/espresso/openmpi/src/python/espressomd/diamond.cpp cd /builddir/build/BUILD/espresso/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/espressomd /builddir/build/BUILD/espresso/openmpi /builddir/build/BUILD/espresso/openmpi/src/python/espressomd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/espressomd_diamond.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/espressomd_diamond.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/espressomd_diamond.dir/depend.internal". Dependee "/builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/espressomd_diamond.dir/depend.internal". Scanning dependencies of target espressomd_diamond make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_diamond.dir/build.make src/python/espressomd/CMakeFiles/espressomd_diamond.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' [ 76%] Building CXX object src/python/espressomd/CMakeFiles/espressomd_diamond.dir/diamond.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd && /usr/bin/g++ -DR123_USE_MULHILO64_C99 -Despressomd_diamond_EXPORTS -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/script_interface -I/builddir/build/BUILD/espresso/src/core/io/mpiio -I/builddir/build/BUILD/espresso/src/core/io/reader -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/python3.9 -isystem /usr/lib64/python3.9/site-packages/numpy/core/include -isystem /usr/include/openmpi-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -Wno-pedantic -Wno-cpp -Wno-strict-aliasing -Wno-maybe-uninitialized -Wno-unused-variable -o CMakeFiles/espressomd_diamond.dir/diamond.cpp.o -c /builddir/build/BUILD/espresso/openmpi/src/python/espressomd/diamond.cpp [ 76%] Linking CXX shared library diamond.so cd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd && /usr/bin/cmake -E cmake_link_script CMakeFiles/espressomd_diamond.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -pthread -Wl,-rpath,/usr/lib64/python3.9/site-packages/openmpi/espressomd -shared -Wl,-soname,diamond.so -o diamond.so CMakeFiles/espressomd_diamond.dir/diamond.cpp.o ../../script_interface/EspressoScriptInterface.so ../../core/shapes/Shapes.so ../../core/cluster_analysis/core_cluster_analysis.so ../../core/io/mpiio/mpiio.so ../../core/io/reader/pdbreader.so ../../core/EspressoCore.so ../../config/EspressoConfig.so /usr/lib64/openmpi/lib/libboost_mpi.so /usr/lib64/libboost_serialization.so ../../pdbparser/pdbparser.so /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so -Wl,-rpath-link,/builddir/build/BUILD/espresso/openmpi/src/core/io/writer:/usr/lib64/openmpi/lib make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' [ 76%] Built target espressomd_diamond /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_cuda_init.dir/build.make src/python/espressomd/CMakeFiles/espressomd_cuda_init.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' [ 76%] Generating cuda_init.cpp cd /builddir/build/BUILD/espresso/openmpi/src/python && /usr/bin/cython -3 --cplus --directive embedsignature=True --directive binding=True -I /builddir/build/BUILD/espresso/src/python/espressomd -I /builddir/build/BUILD/espresso/openmpi/src/python/espressomd /builddir/build/BUILD/espresso/src/python/espressomd/cuda_init.pyx -o /builddir/build/BUILD/espresso/openmpi/src/python/espressomd/cuda_init.cpp cd /builddir/build/BUILD/espresso/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/espressomd /builddir/build/BUILD/espresso/openmpi /builddir/build/BUILD/espresso/openmpi/src/python/espressomd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/espressomd_cuda_init.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/espressomd_cuda_init.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/espressomd_cuda_init.dir/depend.internal". Dependee "/builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/espressomd_cuda_init.dir/depend.internal". Scanning dependencies of target espressomd_cuda_init make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_cuda_init.dir/build.make src/python/espressomd/CMakeFiles/espressomd_cuda_init.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' [ 76%] Building CXX object src/python/espressomd/CMakeFiles/espressomd_cuda_init.dir/cuda_init.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd && /usr/bin/g++ -DR123_USE_MULHILO64_C99 -Despressomd_cuda_init_EXPORTS -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/script_interface -I/builddir/build/BUILD/espresso/src/core/io/mpiio -I/builddir/build/BUILD/espresso/src/core/io/reader -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/python3.9 -isystem /usr/lib64/python3.9/site-packages/numpy/core/include -isystem /usr/include/openmpi-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -Wno-pedantic -Wno-cpp -Wno-strict-aliasing -Wno-maybe-uninitialized -Wno-unused-variable -o CMakeFiles/espressomd_cuda_init.dir/cuda_init.cpp.o -c /builddir/build/BUILD/espresso/openmpi/src/python/espressomd/cuda_init.cpp [ 78%] Linking CXX shared library cuda_init.so cd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd && /usr/bin/cmake -E cmake_link_script CMakeFiles/espressomd_cuda_init.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -pthread -Wl,-rpath,/usr/lib64/python3.9/site-packages/openmpi/espressomd -shared -Wl,-soname,cuda_init.so -o cuda_init.so CMakeFiles/espressomd_cuda_init.dir/cuda_init.cpp.o ../../script_interface/EspressoScriptInterface.so ../../core/shapes/Shapes.so ../../core/cluster_analysis/core_cluster_analysis.so ../../core/io/mpiio/mpiio.so ../../core/io/reader/pdbreader.so ../../core/EspressoCore.so ../../config/EspressoConfig.so /usr/lib64/openmpi/lib/libboost_mpi.so /usr/lib64/libboost_serialization.so ../../pdbparser/pdbparser.so /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so -Wl,-rpath-link,/builddir/build/BUILD/espresso/openmpi/src/core/io/writer:/usr/lib64/openmpi/lib make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' [ 78%] Built target espressomd_cuda_init /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_integrate.dir/build.make src/python/espressomd/CMakeFiles/espressomd_integrate.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' [ 79%] Generating integrate.cpp cd /builddir/build/BUILD/espresso/openmpi/src/python && /usr/bin/cython -3 --cplus --directive embedsignature=True --directive binding=True -I /builddir/build/BUILD/espresso/src/python/espressomd -I /builddir/build/BUILD/espresso/openmpi/src/python/espressomd /builddir/build/BUILD/espresso/src/python/espressomd/integrate.pyx -o /builddir/build/BUILD/espresso/openmpi/src/python/espressomd/integrate.cpp cd /builddir/build/BUILD/espresso/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/espressomd /builddir/build/BUILD/espresso/openmpi /builddir/build/BUILD/espresso/openmpi/src/python/espressomd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/espressomd_integrate.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/espressomd_integrate.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/espressomd_integrate.dir/depend.internal". Dependee "/builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/espressomd_integrate.dir/depend.internal". Scanning dependencies of target espressomd_integrate make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_integrate.dir/build.make src/python/espressomd/CMakeFiles/espressomd_integrate.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' [ 79%] Building CXX object src/python/espressomd/CMakeFiles/espressomd_integrate.dir/integrate.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd && /usr/bin/g++ -DR123_USE_MULHILO64_C99 -Despressomd_integrate_EXPORTS -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/script_interface -I/builddir/build/BUILD/espresso/src/core/io/mpiio -I/builddir/build/BUILD/espresso/src/core/io/reader -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/python3.9 -isystem /usr/lib64/python3.9/site-packages/numpy/core/include -isystem /usr/include/openmpi-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -Wno-pedantic -Wno-cpp -Wno-strict-aliasing -Wno-maybe-uninitialized -Wno-unused-variable -o CMakeFiles/espressomd_integrate.dir/integrate.cpp.o -c /builddir/build/BUILD/espresso/openmpi/src/python/espressomd/integrate.cpp [ 79%] Linking CXX shared library integrate.so cd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd && /usr/bin/cmake -E cmake_link_script CMakeFiles/espressomd_integrate.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -pthread -Wl,-rpath,/usr/lib64/python3.9/site-packages/openmpi/espressomd -shared -Wl,-soname,integrate.so -o integrate.so CMakeFiles/espressomd_integrate.dir/integrate.cpp.o ../../script_interface/EspressoScriptInterface.so ../../core/shapes/Shapes.so ../../core/cluster_analysis/core_cluster_analysis.so ../../core/io/mpiio/mpiio.so ../../core/io/reader/pdbreader.so ../../core/EspressoCore.so ../../config/EspressoConfig.so /usr/lib64/openmpi/lib/libboost_mpi.so /usr/lib64/libboost_serialization.so ../../pdbparser/pdbparser.so /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so -Wl,-rpath-link,/builddir/build/BUILD/espresso/openmpi/src/core/io/writer:/usr/lib64/openmpi/lib make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' [ 79%] Built target espressomd_integrate /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_actors.dir/build.make src/python/espressomd/CMakeFiles/espressomd_actors.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' [ 81%] Generating actors.cpp cd /builddir/build/BUILD/espresso/openmpi/src/python && /usr/bin/cython -3 --cplus --directive embedsignature=True --directive binding=True -I /builddir/build/BUILD/espresso/src/python/espressomd -I /builddir/build/BUILD/espresso/openmpi/src/python/espressomd /builddir/build/BUILD/espresso/src/python/espressomd/actors.pyx -o /builddir/build/BUILD/espresso/openmpi/src/python/espressomd/actors.cpp cd /builddir/build/BUILD/espresso/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/espressomd /builddir/build/BUILD/espresso/openmpi /builddir/build/BUILD/espresso/openmpi/src/python/espressomd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/espressomd_actors.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/espressomd_actors.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/espressomd_actors.dir/depend.internal". Dependee "/builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/espressomd_actors.dir/depend.internal". Scanning dependencies of target espressomd_actors make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_actors.dir/build.make src/python/espressomd/CMakeFiles/espressomd_actors.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' [ 81%] Building CXX object src/python/espressomd/CMakeFiles/espressomd_actors.dir/actors.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd && /usr/bin/g++ -DR123_USE_MULHILO64_C99 -Despressomd_actors_EXPORTS -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/script_interface -I/builddir/build/BUILD/espresso/src/core/io/mpiio -I/builddir/build/BUILD/espresso/src/core/io/reader -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/python3.9 -isystem /usr/lib64/python3.9/site-packages/numpy/core/include -isystem /usr/include/openmpi-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -Wno-pedantic -Wno-cpp -Wno-strict-aliasing -Wno-maybe-uninitialized -Wno-unused-variable -o CMakeFiles/espressomd_actors.dir/actors.cpp.o -c /builddir/build/BUILD/espresso/openmpi/src/python/espressomd/actors.cpp [ 81%] Linking CXX shared library actors.so cd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd && /usr/bin/cmake -E cmake_link_script CMakeFiles/espressomd_actors.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -pthread -Wl,-rpath,/usr/lib64/python3.9/site-packages/openmpi/espressomd -shared -Wl,-soname,actors.so -o actors.so CMakeFiles/espressomd_actors.dir/actors.cpp.o ../../script_interface/EspressoScriptInterface.so ../../core/shapes/Shapes.so ../../core/cluster_analysis/core_cluster_analysis.so ../../core/io/mpiio/mpiio.so ../../core/io/reader/pdbreader.so ../../core/EspressoCore.so ../../config/EspressoConfig.so /usr/lib64/openmpi/lib/libboost_mpi.so /usr/lib64/libboost_serialization.so ../../pdbparser/pdbparser.so /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so -Wl,-rpath-link,/builddir/build/BUILD/espresso/openmpi/src/core/io/writer:/usr/lib64/openmpi/lib make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' [ 81%] Built target espressomd_actors /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd__init.dir/build.make src/python/espressomd/CMakeFiles/espressomd__init.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' [ 81%] Generating _init.cpp cd /builddir/build/BUILD/espresso/openmpi/src/python && /usr/bin/cython -3 --cplus --directive embedsignature=True --directive binding=True -I /builddir/build/BUILD/espresso/src/python/espressomd -I /builddir/build/BUILD/espresso/openmpi/src/python/espressomd /builddir/build/BUILD/espresso/src/python/espressomd/_init.pyx -o /builddir/build/BUILD/espresso/openmpi/src/python/espressomd/_init.cpp cd /builddir/build/BUILD/espresso/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/espressomd /builddir/build/BUILD/espresso/openmpi /builddir/build/BUILD/espresso/openmpi/src/python/espressomd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/espressomd__init.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/espressomd__init.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/espressomd__init.dir/depend.internal". Dependee "/builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/espressomd__init.dir/depend.internal". Scanning dependencies of target espressomd__init make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd__init.dir/build.make src/python/espressomd/CMakeFiles/espressomd__init.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' [ 81%] Building CXX object src/python/espressomd/CMakeFiles/espressomd__init.dir/_init.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd && /usr/bin/g++ -DR123_USE_MULHILO64_C99 -Despressomd__init_EXPORTS -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/script_interface -I/builddir/build/BUILD/espresso/src/core/io/mpiio -I/builddir/build/BUILD/espresso/src/core/io/reader -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/python3.9 -isystem /usr/lib64/python3.9/site-packages/numpy/core/include -isystem /usr/include/openmpi-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -Wno-pedantic -Wno-cpp -Wno-strict-aliasing -Wno-maybe-uninitialized -Wno-unused-variable -o CMakeFiles/espressomd__init.dir/_init.cpp.o -c /builddir/build/BUILD/espresso/openmpi/src/python/espressomd/_init.cpp [ 81%] Linking CXX shared library _init.so cd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd && /usr/bin/cmake -E cmake_link_script CMakeFiles/espressomd__init.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -pthread -Wl,-rpath,/usr/lib64/python3.9/site-packages/openmpi/espressomd -shared -Wl,-soname,_init.so -o _init.so CMakeFiles/espressomd__init.dir/_init.cpp.o ../../script_interface/EspressoScriptInterface.so ../../core/shapes/Shapes.so ../../core/cluster_analysis/core_cluster_analysis.so ../../core/io/mpiio/mpiio.so ../../core/io/reader/pdbreader.so ../../core/EspressoCore.so ../../config/EspressoConfig.so /usr/lib64/openmpi/lib/libboost_mpi.so /usr/lib64/libboost_serialization.so ../../pdbparser/pdbparser.so /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so -Wl,-rpath-link,/builddir/build/BUILD/espresso/openmpi/src/core/io/writer:/usr/lib64/openmpi/lib make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' [ 81%] Built target espressomd__init /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_polymer.dir/build.make src/python/espressomd/CMakeFiles/espressomd_polymer.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' [ 81%] Generating polymer.cpp cd /builddir/build/BUILD/espresso/openmpi/src/python && /usr/bin/cython -3 --cplus --directive embedsignature=True --directive binding=True -I /builddir/build/BUILD/espresso/src/python/espressomd -I /builddir/build/BUILD/espresso/openmpi/src/python/espressomd /builddir/build/BUILD/espresso/src/python/espressomd/polymer.pyx -o /builddir/build/BUILD/espresso/openmpi/src/python/espressomd/polymer.cpp cd /builddir/build/BUILD/espresso/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/espressomd /builddir/build/BUILD/espresso/openmpi /builddir/build/BUILD/espresso/openmpi/src/python/espressomd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/espressomd_polymer.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/espressomd_polymer.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/espressomd_polymer.dir/depend.internal". Dependee "/builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/espressomd_polymer.dir/depend.internal". Scanning dependencies of target espressomd_polymer make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_polymer.dir/build.make src/python/espressomd/CMakeFiles/espressomd_polymer.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' [ 81%] Building CXX object src/python/espressomd/CMakeFiles/espressomd_polymer.dir/polymer.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd && /usr/bin/g++ -DR123_USE_MULHILO64_C99 -Despressomd_polymer_EXPORTS -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/script_interface -I/builddir/build/BUILD/espresso/src/core/io/mpiio -I/builddir/build/BUILD/espresso/src/core/io/reader -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/python3.9 -isystem /usr/lib64/python3.9/site-packages/numpy/core/include -isystem /usr/include/openmpi-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -Wno-pedantic -Wno-cpp -Wno-strict-aliasing -Wno-maybe-uninitialized -Wno-unused-variable -o CMakeFiles/espressomd_polymer.dir/polymer.cpp.o -c /builddir/build/BUILD/espresso/openmpi/src/python/espressomd/polymer.cpp [ 81%] Linking CXX shared library polymer.so cd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd && /usr/bin/cmake -E cmake_link_script CMakeFiles/espressomd_polymer.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -pthread -Wl,-rpath,/usr/lib64/python3.9/site-packages/openmpi/espressomd -shared -Wl,-soname,polymer.so -o polymer.so CMakeFiles/espressomd_polymer.dir/polymer.cpp.o ../../script_interface/EspressoScriptInterface.so ../../core/shapes/Shapes.so ../../core/cluster_analysis/core_cluster_analysis.so ../../core/io/mpiio/mpiio.so ../../core/io/reader/pdbreader.so ../../core/EspressoCore.so ../../config/EspressoConfig.so /usr/lib64/openmpi/lib/libboost_mpi.so /usr/lib64/libboost_serialization.so ../../pdbparser/pdbparser.so /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so -Wl,-rpath-link,/builddir/build/BUILD/espresso/openmpi/src/core/io/writer:/usr/lib64/openmpi/lib make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' [ 82%] Built target espressomd_polymer /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_galilei.dir/build.make src/python/espressomd/CMakeFiles/espressomd_galilei.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' [ 82%] Generating galilei.cpp cd /builddir/build/BUILD/espresso/openmpi/src/python && /usr/bin/cython -3 --cplus --directive embedsignature=True --directive binding=True -I /builddir/build/BUILD/espresso/src/python/espressomd -I /builddir/build/BUILD/espresso/openmpi/src/python/espressomd /builddir/build/BUILD/espresso/src/python/espressomd/galilei.pyx -o /builddir/build/BUILD/espresso/openmpi/src/python/espressomd/galilei.cpp cd /builddir/build/BUILD/espresso/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/espressomd /builddir/build/BUILD/espresso/openmpi /builddir/build/BUILD/espresso/openmpi/src/python/espressomd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/espressomd_galilei.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/espressomd_galilei.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/espressomd_galilei.dir/depend.internal". Dependee "/builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/espressomd_galilei.dir/depend.internal". Scanning dependencies of target espressomd_galilei make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_galilei.dir/build.make src/python/espressomd/CMakeFiles/espressomd_galilei.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' [ 82%] Building CXX object src/python/espressomd/CMakeFiles/espressomd_galilei.dir/galilei.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd && /usr/bin/g++ -DR123_USE_MULHILO64_C99 -Despressomd_galilei_EXPORTS -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/script_interface -I/builddir/build/BUILD/espresso/src/core/io/mpiio -I/builddir/build/BUILD/espresso/src/core/io/reader -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/python3.9 -isystem /usr/lib64/python3.9/site-packages/numpy/core/include -isystem /usr/include/openmpi-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -Wno-pedantic -Wno-cpp -Wno-strict-aliasing -Wno-maybe-uninitialized -Wno-unused-variable -o CMakeFiles/espressomd_galilei.dir/galilei.cpp.o -c /builddir/build/BUILD/espresso/openmpi/src/python/espressomd/galilei.cpp [ 84%] Linking CXX shared library galilei.so cd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd && /usr/bin/cmake -E cmake_link_script CMakeFiles/espressomd_galilei.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -pthread -Wl,-rpath,/usr/lib64/python3.9/site-packages/openmpi/espressomd -shared -Wl,-soname,galilei.so -o galilei.so CMakeFiles/espressomd_galilei.dir/galilei.cpp.o ../../script_interface/EspressoScriptInterface.so ../../core/shapes/Shapes.so ../../core/cluster_analysis/core_cluster_analysis.so ../../core/io/mpiio/mpiio.so ../../core/io/reader/pdbreader.so ../../core/EspressoCore.so ../../config/EspressoConfig.so /usr/lib64/openmpi/lib/libboost_mpi.so /usr/lib64/libboost_serialization.so ../../pdbparser/pdbparser.so /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so -Wl,-rpath-link,/builddir/build/BUILD/espresso/openmpi/src/core/io/writer:/usr/lib64/openmpi/lib make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' [ 84%] Built target espressomd_galilei /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_reaction_ensemble.dir/build.make src/python/espressomd/CMakeFiles/espressomd_reaction_ensemble.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' [ 84%] Generating reaction_ensemble.cpp cd /builddir/build/BUILD/espresso/openmpi/src/python && /usr/bin/cython -3 --cplus --directive embedsignature=True --directive binding=True -I /builddir/build/BUILD/espresso/src/python/espressomd -I /builddir/build/BUILD/espresso/openmpi/src/python/espressomd /builddir/build/BUILD/espresso/src/python/espressomd/reaction_ensemble.pyx -o /builddir/build/BUILD/espresso/openmpi/src/python/espressomd/reaction_ensemble.cpp cd /builddir/build/BUILD/espresso/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/espressomd /builddir/build/BUILD/espresso/openmpi /builddir/build/BUILD/espresso/openmpi/src/python/espressomd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/espressomd_reaction_ensemble.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/espressomd_reaction_ensemble.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/espressomd_reaction_ensemble.dir/depend.internal". Dependee "/builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/espressomd_reaction_ensemble.dir/depend.internal". Scanning dependencies of target espressomd_reaction_ensemble make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_reaction_ensemble.dir/build.make src/python/espressomd/CMakeFiles/espressomd_reaction_ensemble.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' [ 84%] Building CXX object src/python/espressomd/CMakeFiles/espressomd_reaction_ensemble.dir/reaction_ensemble.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd && /usr/bin/g++ -DR123_USE_MULHILO64_C99 -Despressomd_reaction_ensemble_EXPORTS -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/script_interface -I/builddir/build/BUILD/espresso/src/core/io/mpiio -I/builddir/build/BUILD/espresso/src/core/io/reader -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/python3.9 -isystem /usr/lib64/python3.9/site-packages/numpy/core/include -isystem /usr/include/openmpi-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -Wno-pedantic -Wno-cpp -Wno-strict-aliasing -Wno-maybe-uninitialized -Wno-unused-variable -o CMakeFiles/espressomd_reaction_ensemble.dir/reaction_ensemble.cpp.o -c /builddir/build/BUILD/espresso/openmpi/src/python/espressomd/reaction_ensemble.cpp [ 85%] Linking CXX shared library reaction_ensemble.so cd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd && /usr/bin/cmake -E cmake_link_script CMakeFiles/espressomd_reaction_ensemble.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -pthread -Wl,-rpath,/usr/lib64/python3.9/site-packages/openmpi/espressomd -shared -Wl,-soname,reaction_ensemble.so -o reaction_ensemble.so CMakeFiles/espressomd_reaction_ensemble.dir/reaction_ensemble.cpp.o ../../script_interface/EspressoScriptInterface.so ../../core/shapes/Shapes.so ../../core/cluster_analysis/core_cluster_analysis.so ../../core/io/mpiio/mpiio.so ../../core/io/reader/pdbreader.so ../../core/EspressoCore.so ../../config/EspressoConfig.so /usr/lib64/openmpi/lib/libboost_mpi.so /usr/lib64/libboost_serialization.so ../../pdbparser/pdbparser.so /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so -Wl,-rpath-link,/builddir/build/BUILD/espresso/openmpi/src/core/io/writer:/usr/lib64/openmpi/lib make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' [ 85%] Built target espressomd_reaction_ensemble /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_analyze.dir/build.make src/python/espressomd/CMakeFiles/espressomd_analyze.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' [ 85%] Generating analyze.cpp cd /builddir/build/BUILD/espresso/openmpi/src/python && /usr/bin/cython -3 --cplus --directive embedsignature=True --directive binding=True -I /builddir/build/BUILD/espresso/src/python/espressomd -I /builddir/build/BUILD/espresso/openmpi/src/python/espressomd /builddir/build/BUILD/espresso/src/python/espressomd/analyze.pyx -o /builddir/build/BUILD/espresso/openmpi/src/python/espressomd/analyze.cpp cd /builddir/build/BUILD/espresso/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/espressomd /builddir/build/BUILD/espresso/openmpi /builddir/build/BUILD/espresso/openmpi/src/python/espressomd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/espressomd_analyze.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/espressomd_analyze.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/espressomd_analyze.dir/depend.internal". Dependee "/builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/espressomd_analyze.dir/depend.internal". Scanning dependencies of target espressomd_analyze make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_analyze.dir/build.make src/python/espressomd/CMakeFiles/espressomd_analyze.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' [ 85%] Building CXX object src/python/espressomd/CMakeFiles/espressomd_analyze.dir/analyze.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd && /usr/bin/g++ -DR123_USE_MULHILO64_C99 -Despressomd_analyze_EXPORTS -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/script_interface -I/builddir/build/BUILD/espresso/src/core/io/mpiio -I/builddir/build/BUILD/espresso/src/core/io/reader -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/python3.9 -isystem /usr/lib64/python3.9/site-packages/numpy/core/include -isystem /usr/include/openmpi-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -Wno-pedantic -Wno-cpp -Wno-strict-aliasing -Wno-maybe-uninitialized -Wno-unused-variable -o CMakeFiles/espressomd_analyze.dir/analyze.cpp.o -c /builddir/build/BUILD/espresso/openmpi/src/python/espressomd/analyze.cpp [ 85%] Linking CXX shared library analyze.so cd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd && /usr/bin/cmake -E cmake_link_script CMakeFiles/espressomd_analyze.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -pthread -Wl,-rpath,/usr/lib64/python3.9/site-packages/openmpi/espressomd -shared -Wl,-soname,analyze.so -o analyze.so CMakeFiles/espressomd_analyze.dir/analyze.cpp.o ../../script_interface/EspressoScriptInterface.so ../../core/shapes/Shapes.so ../../core/cluster_analysis/core_cluster_analysis.so ../../core/io/mpiio/mpiio.so ../../core/io/reader/pdbreader.so ../../core/EspressoCore.so ../../config/EspressoConfig.so /usr/lib64/openmpi/lib/libboost_mpi.so /usr/lib64/libboost_serialization.so ../../pdbparser/pdbparser.so /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so -Wl,-rpath-link,/builddir/build/BUILD/espresso/openmpi/src/core/io/writer:/usr/lib64/openmpi/lib make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' [ 87%] Built target espressomd_analyze /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_particle_data.dir/build.make src/python/espressomd/CMakeFiles/espressomd_particle_data.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' [ 89%] Generating particle_data.cpp cd /builddir/build/BUILD/espresso/openmpi/src/python && /usr/bin/cython -3 --cplus --directive embedsignature=True --directive binding=True -I /builddir/build/BUILD/espresso/src/python/espressomd -I /builddir/build/BUILD/espresso/openmpi/src/python/espressomd /builddir/build/BUILD/espresso/src/python/espressomd/particle_data.pyx -o /builddir/build/BUILD/espresso/openmpi/src/python/espressomd/particle_data.cpp cd /builddir/build/BUILD/espresso/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/espressomd /builddir/build/BUILD/espresso/openmpi /builddir/build/BUILD/espresso/openmpi/src/python/espressomd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/espressomd_particle_data.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/espressomd_particle_data.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/espressomd_particle_data.dir/depend.internal". Dependee "/builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/espressomd_particle_data.dir/depend.internal". Scanning dependencies of target espressomd_particle_data make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_particle_data.dir/build.make src/python/espressomd/CMakeFiles/espressomd_particle_data.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' [ 89%] Building CXX object src/python/espressomd/CMakeFiles/espressomd_particle_data.dir/particle_data.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd && /usr/bin/g++ -DR123_USE_MULHILO64_C99 -Despressomd_particle_data_EXPORTS -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/script_interface -I/builddir/build/BUILD/espresso/src/core/io/mpiio -I/builddir/build/BUILD/espresso/src/core/io/reader -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/python3.9 -isystem /usr/lib64/python3.9/site-packages/numpy/core/include -isystem /usr/include/openmpi-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -Wno-pedantic -Wno-cpp -Wno-strict-aliasing -Wno-maybe-uninitialized -Wno-unused-variable -o CMakeFiles/espressomd_particle_data.dir/particle_data.cpp.o -c /builddir/build/BUILD/espresso/openmpi/src/python/espressomd/particle_data.cpp [ 89%] Linking CXX shared library particle_data.so cd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd && /usr/bin/cmake -E cmake_link_script CMakeFiles/espressomd_particle_data.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -pthread -Wl,-rpath,/usr/lib64/python3.9/site-packages/openmpi/espressomd -shared -Wl,-soname,particle_data.so -o particle_data.so CMakeFiles/espressomd_particle_data.dir/particle_data.cpp.o ../../script_interface/EspressoScriptInterface.so ../../core/shapes/Shapes.so ../../core/cluster_analysis/core_cluster_analysis.so ../../core/io/mpiio/mpiio.so ../../core/io/reader/pdbreader.so ../../core/EspressoCore.so ../../config/EspressoConfig.so /usr/lib64/openmpi/lib/libboost_mpi.so /usr/lib64/libboost_serialization.so ../../pdbparser/pdbparser.so /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so -Wl,-rpath-link,/builddir/build/BUILD/espresso/openmpi/src/core/io/writer:/usr/lib64/openmpi/lib make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' [ 89%] Built target espressomd_particle_data /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_collision_detection.dir/build.make src/python/espressomd/CMakeFiles/espressomd_collision_detection.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' [ 89%] Generating collision_detection.cpp cd /builddir/build/BUILD/espresso/openmpi/src/python && /usr/bin/cython -3 --cplus --directive embedsignature=True --directive binding=True -I /builddir/build/BUILD/espresso/src/python/espressomd -I /builddir/build/BUILD/espresso/openmpi/src/python/espressomd /builddir/build/BUILD/espresso/src/python/espressomd/collision_detection.pyx -o /builddir/build/BUILD/espresso/openmpi/src/python/espressomd/collision_detection.cpp cd /builddir/build/BUILD/espresso/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/espressomd /builddir/build/BUILD/espresso/openmpi /builddir/build/BUILD/espresso/openmpi/src/python/espressomd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/espressomd_collision_detection.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/espressomd_collision_detection.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/espressomd_collision_detection.dir/depend.internal". Dependee "/builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/espressomd_collision_detection.dir/depend.internal". Scanning dependencies of target espressomd_collision_detection make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_collision_detection.dir/build.make src/python/espressomd/CMakeFiles/espressomd_collision_detection.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' [ 89%] Building CXX object src/python/espressomd/CMakeFiles/espressomd_collision_detection.dir/collision_detection.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd && /usr/bin/g++ -DR123_USE_MULHILO64_C99 -Despressomd_collision_detection_EXPORTS -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/script_interface -I/builddir/build/BUILD/espresso/src/core/io/mpiio -I/builddir/build/BUILD/espresso/src/core/io/reader -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/python3.9 -isystem /usr/lib64/python3.9/site-packages/numpy/core/include -isystem /usr/include/openmpi-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -Wno-pedantic -Wno-cpp -Wno-strict-aliasing -Wno-maybe-uninitialized -Wno-unused-variable -o CMakeFiles/espressomd_collision_detection.dir/collision_detection.cpp.o -c /builddir/build/BUILD/espresso/openmpi/src/python/espressomd/collision_detection.cpp [ 90%] Linking CXX shared library collision_detection.so cd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd && /usr/bin/cmake -E cmake_link_script CMakeFiles/espressomd_collision_detection.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -pthread -Wl,-rpath,/usr/lib64/python3.9/site-packages/openmpi/espressomd -shared -Wl,-soname,collision_detection.so -o collision_detection.so CMakeFiles/espressomd_collision_detection.dir/collision_detection.cpp.o ../../script_interface/EspressoScriptInterface.so ../../core/shapes/Shapes.so ../../core/cluster_analysis/core_cluster_analysis.so ../../core/io/mpiio/mpiio.so ../../core/io/reader/pdbreader.so ../../core/EspressoCore.so ../../config/EspressoConfig.so /usr/lib64/openmpi/lib/libboost_mpi.so /usr/lib64/libboost_serialization.so ../../pdbparser/pdbparser.so /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so -Wl,-rpath-link,/builddir/build/BUILD/espresso/openmpi/src/core/io/writer:/usr/lib64/openmpi/lib make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' [ 90%] Built target espressomd_collision_detection /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_script_interface.dir/build.make src/python/espressomd/CMakeFiles/espressomd_script_interface.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' [ 92%] Generating script_interface.cpp cd /builddir/build/BUILD/espresso/openmpi/src/python && /usr/bin/cython -3 --cplus --directive embedsignature=True --directive binding=True -I /builddir/build/BUILD/espresso/src/python/espressomd -I /builddir/build/BUILD/espresso/openmpi/src/python/espressomd /builddir/build/BUILD/espresso/src/python/espressomd/script_interface.pyx -o /builddir/build/BUILD/espresso/openmpi/src/python/espressomd/script_interface.cpp cd /builddir/build/BUILD/espresso/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/espressomd /builddir/build/BUILD/espresso/openmpi /builddir/build/BUILD/espresso/openmpi/src/python/espressomd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/espressomd_script_interface.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/espressomd_script_interface.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/espressomd_script_interface.dir/depend.internal". Dependee "/builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/espressomd_script_interface.dir/depend.internal". Scanning dependencies of target espressomd_script_interface make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_script_interface.dir/build.make src/python/espressomd/CMakeFiles/espressomd_script_interface.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' [ 92%] Building CXX object src/python/espressomd/CMakeFiles/espressomd_script_interface.dir/script_interface.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd && /usr/bin/g++ -DR123_USE_MULHILO64_C99 -Despressomd_script_interface_EXPORTS -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/script_interface -I/builddir/build/BUILD/espresso/src/core/io/mpiio -I/builddir/build/BUILD/espresso/src/core/io/reader -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/python3.9 -isystem /usr/lib64/python3.9/site-packages/numpy/core/include -isystem /usr/include/openmpi-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -Wno-pedantic -Wno-cpp -Wno-strict-aliasing -Wno-maybe-uninitialized -Wno-unused-variable -o CMakeFiles/espressomd_script_interface.dir/script_interface.cpp.o -c /builddir/build/BUILD/espresso/openmpi/src/python/espressomd/script_interface.cpp [ 92%] Linking CXX shared library script_interface.so cd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd && /usr/bin/cmake -E cmake_link_script CMakeFiles/espressomd_script_interface.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -pthread -Wl,-rpath,/usr/lib64/python3.9/site-packages/openmpi/espressomd -shared -Wl,-soname,script_interface.so -o script_interface.so CMakeFiles/espressomd_script_interface.dir/script_interface.cpp.o ../../script_interface/EspressoScriptInterface.so ../../core/shapes/Shapes.so ../../core/cluster_analysis/core_cluster_analysis.so ../../core/io/mpiio/mpiio.so ../../core/io/reader/pdbreader.so ../../core/EspressoCore.so ../../config/EspressoConfig.so /usr/lib64/openmpi/lib/libboost_mpi.so /usr/lib64/libboost_serialization.so ../../pdbparser/pdbparser.so /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so -Wl,-rpath-link,/builddir/build/BUILD/espresso/openmpi/src/core/io/writer:/usr/lib64/openmpi/lib make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' [ 92%] Built target espressomd_script_interface /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_globals.dir/build.make src/python/espressomd/CMakeFiles/espressomd_globals.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' [ 92%] Generating globals.cpp cd /builddir/build/BUILD/espresso/openmpi/src/python && /usr/bin/cython -3 --cplus --directive embedsignature=True --directive binding=True -I /builddir/build/BUILD/espresso/src/python/espressomd -I /builddir/build/BUILD/espresso/openmpi/src/python/espressomd /builddir/build/BUILD/espresso/src/python/espressomd/globals.pyx -o /builddir/build/BUILD/espresso/openmpi/src/python/espressomd/globals.cpp cd /builddir/build/BUILD/espresso/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/espressomd /builddir/build/BUILD/espresso/openmpi /builddir/build/BUILD/espresso/openmpi/src/python/espressomd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/espressomd_globals.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/espressomd_globals.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/espressomd_globals.dir/depend.internal". Dependee "/builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/espressomd_globals.dir/depend.internal". Scanning dependencies of target espressomd_globals make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_globals.dir/build.make src/python/espressomd/CMakeFiles/espressomd_globals.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' [ 92%] Building CXX object src/python/espressomd/CMakeFiles/espressomd_globals.dir/globals.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd && /usr/bin/g++ -DR123_USE_MULHILO64_C99 -Despressomd_globals_EXPORTS -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/script_interface -I/builddir/build/BUILD/espresso/src/core/io/mpiio -I/builddir/build/BUILD/espresso/src/core/io/reader -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/python3.9 -isystem /usr/lib64/python3.9/site-packages/numpy/core/include -isystem /usr/include/openmpi-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -Wno-pedantic -Wno-cpp -Wno-strict-aliasing -Wno-maybe-uninitialized -Wno-unused-variable -o CMakeFiles/espressomd_globals.dir/globals.cpp.o -c /builddir/build/BUILD/espresso/openmpi/src/python/espressomd/globals.cpp [ 92%] Linking CXX shared library globals.so cd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd && /usr/bin/cmake -E cmake_link_script CMakeFiles/espressomd_globals.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -pthread -Wl,-rpath,/usr/lib64/python3.9/site-packages/openmpi/espressomd -shared -Wl,-soname,globals.so -o globals.so CMakeFiles/espressomd_globals.dir/globals.cpp.o ../../script_interface/EspressoScriptInterface.so ../../core/shapes/Shapes.so ../../core/cluster_analysis/core_cluster_analysis.so ../../core/io/mpiio/mpiio.so ../../core/io/reader/pdbreader.so ../../core/EspressoCore.so ../../config/EspressoConfig.so /usr/lib64/openmpi/lib/libboost_mpi.so /usr/lib64/libboost_serialization.so ../../pdbparser/pdbparser.so /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so -Wl,-rpath-link,/builddir/build/BUILD/espresso/openmpi/src/core/io/writer:/usr/lib64/openmpi/lib make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' [ 92%] Built target espressomd_globals /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_magnetostatic_extensions.dir/build.make src/python/espressomd/CMakeFiles/espressomd_magnetostatic_extensions.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' [ 92%] Generating magnetostatic_extensions.cpp cd /builddir/build/BUILD/espresso/openmpi/src/python && /usr/bin/cython -3 --cplus --directive embedsignature=True --directive binding=True -I /builddir/build/BUILD/espresso/src/python/espressomd -I /builddir/build/BUILD/espresso/openmpi/src/python/espressomd /builddir/build/BUILD/espresso/src/python/espressomd/magnetostatic_extensions.pyx -o /builddir/build/BUILD/espresso/openmpi/src/python/espressomd/magnetostatic_extensions.cpp cd /builddir/build/BUILD/espresso/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/espressomd /builddir/build/BUILD/espresso/openmpi /builddir/build/BUILD/espresso/openmpi/src/python/espressomd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/espressomd_magnetostatic_extensions.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/espressomd_magnetostatic_extensions.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/espressomd_magnetostatic_extensions.dir/depend.internal". Dependee "/builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/espressomd_magnetostatic_extensions.dir/depend.internal". Scanning dependencies of target espressomd_magnetostatic_extensions make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_magnetostatic_extensions.dir/build.make src/python/espressomd/CMakeFiles/espressomd_magnetostatic_extensions.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' [ 92%] Building CXX object src/python/espressomd/CMakeFiles/espressomd_magnetostatic_extensions.dir/magnetostatic_extensions.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd && /usr/bin/g++ -DR123_USE_MULHILO64_C99 -Despressomd_magnetostatic_extensions_EXPORTS -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/script_interface -I/builddir/build/BUILD/espresso/src/core/io/mpiio -I/builddir/build/BUILD/espresso/src/core/io/reader -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/python3.9 -isystem /usr/lib64/python3.9/site-packages/numpy/core/include -isystem /usr/include/openmpi-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -Wno-pedantic -Wno-cpp -Wno-strict-aliasing -Wno-maybe-uninitialized -Wno-unused-variable -o CMakeFiles/espressomd_magnetostatic_extensions.dir/magnetostatic_extensions.cpp.o -c /builddir/build/BUILD/espresso/openmpi/src/python/espressomd/magnetostatic_extensions.cpp [ 93%] Linking CXX shared library magnetostatic_extensions.so cd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd && /usr/bin/cmake -E cmake_link_script CMakeFiles/espressomd_magnetostatic_extensions.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -pthread -Wl,-rpath,/usr/lib64/python3.9/site-packages/openmpi/espressomd -shared -Wl,-soname,magnetostatic_extensions.so -o magnetostatic_extensions.so CMakeFiles/espressomd_magnetostatic_extensions.dir/magnetostatic_extensions.cpp.o ../../script_interface/EspressoScriptInterface.so ../../core/shapes/Shapes.so ../../core/cluster_analysis/core_cluster_analysis.so ../../core/io/mpiio/mpiio.so ../../core/io/reader/pdbreader.so ../../core/EspressoCore.so ../../config/EspressoConfig.so /usr/lib64/openmpi/lib/libboost_mpi.so /usr/lib64/libboost_serialization.so ../../pdbparser/pdbparser.so /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so -Wl,-rpath-link,/builddir/build/BUILD/espresso/openmpi/src/core/io/writer:/usr/lib64/openmpi/lib make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' [ 93%] Built target espressomd_magnetostatic_extensions /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_interactions.dir/build.make src/python/espressomd/CMakeFiles/espressomd_interactions.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' [ 93%] Generating interactions.cpp cd /builddir/build/BUILD/espresso/openmpi/src/python && /usr/bin/cython -3 --cplus --directive embedsignature=True --directive binding=True -I /builddir/build/BUILD/espresso/src/python/espressomd -I /builddir/build/BUILD/espresso/openmpi/src/python/espressomd /builddir/build/BUILD/espresso/src/python/espressomd/interactions.pyx -o /builddir/build/BUILD/espresso/openmpi/src/python/espressomd/interactions.cpp cd /builddir/build/BUILD/espresso/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/espressomd /builddir/build/BUILD/espresso/openmpi /builddir/build/BUILD/espresso/openmpi/src/python/espressomd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/espressomd_interactions.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/espressomd_interactions.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/espressomd_interactions.dir/depend.internal". Dependee "/builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/espressomd_interactions.dir/depend.internal". Scanning dependencies of target espressomd_interactions make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_interactions.dir/build.make src/python/espressomd/CMakeFiles/espressomd_interactions.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' [ 93%] Building CXX object src/python/espressomd/CMakeFiles/espressomd_interactions.dir/interactions.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd && /usr/bin/g++ -DR123_USE_MULHILO64_C99 -Despressomd_interactions_EXPORTS -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/script_interface -I/builddir/build/BUILD/espresso/src/core/io/mpiio -I/builddir/build/BUILD/espresso/src/core/io/reader -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/python3.9 -isystem /usr/lib64/python3.9/site-packages/numpy/core/include -isystem /usr/include/openmpi-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -Wno-pedantic -Wno-cpp -Wno-strict-aliasing -Wno-maybe-uninitialized -Wno-unused-variable -o CMakeFiles/espressomd_interactions.dir/interactions.cpp.o -c /builddir/build/BUILD/espresso/openmpi/src/python/espressomd/interactions.cpp [ 93%] Linking CXX shared library interactions.so cd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd && /usr/bin/cmake -E cmake_link_script CMakeFiles/espressomd_interactions.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -pthread -Wl,-rpath,/usr/lib64/python3.9/site-packages/openmpi/espressomd -shared -Wl,-soname,interactions.so -o interactions.so CMakeFiles/espressomd_interactions.dir/interactions.cpp.o ../../script_interface/EspressoScriptInterface.so ../../core/shapes/Shapes.so ../../core/cluster_analysis/core_cluster_analysis.so ../../core/io/mpiio/mpiio.so ../../core/io/reader/pdbreader.so ../../core/EspressoCore.so ../../config/EspressoConfig.so /usr/lib64/openmpi/lib/libboost_mpi.so /usr/lib64/libboost_serialization.so ../../pdbparser/pdbparser.so /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so -Wl,-rpath-link,/builddir/build/BUILD/espresso/openmpi/src/core/io/writer:/usr/lib64/openmpi/lib make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' [ 95%] Built target espressomd_interactions /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_lb.dir/build.make src/python/espressomd/CMakeFiles/espressomd_lb.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' [ 95%] Generating lb.cpp cd /builddir/build/BUILD/espresso/openmpi/src/python && /usr/bin/cython -3 --cplus --directive embedsignature=True --directive binding=True -I /builddir/build/BUILD/espresso/src/python/espressomd -I /builddir/build/BUILD/espresso/openmpi/src/python/espressomd /builddir/build/BUILD/espresso/src/python/espressomd/lb.pyx -o /builddir/build/BUILD/espresso/openmpi/src/python/espressomd/lb.cpp cd /builddir/build/BUILD/espresso/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/espressomd /builddir/build/BUILD/espresso/openmpi /builddir/build/BUILD/espresso/openmpi/src/python/espressomd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/espressomd_lb.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/espressomd_lb.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/espressomd_lb.dir/depend.internal". Dependee "/builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/espressomd_lb.dir/depend.internal". Scanning dependencies of target espressomd_lb make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_lb.dir/build.make src/python/espressomd/CMakeFiles/espressomd_lb.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' [ 96%] Building CXX object src/python/espressomd/CMakeFiles/espressomd_lb.dir/lb.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd && /usr/bin/g++ -DR123_USE_MULHILO64_C99 -Despressomd_lb_EXPORTS -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/script_interface -I/builddir/build/BUILD/espresso/src/core/io/mpiio -I/builddir/build/BUILD/espresso/src/core/io/reader -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/python3.9 -isystem /usr/lib64/python3.9/site-packages/numpy/core/include -isystem /usr/include/openmpi-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -Wno-pedantic -Wno-cpp -Wno-strict-aliasing -Wno-maybe-uninitialized -Wno-unused-variable -o CMakeFiles/espressomd_lb.dir/lb.cpp.o -c /builddir/build/BUILD/espresso/openmpi/src/python/espressomd/lb.cpp [ 96%] Linking CXX shared library lb.so cd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd && /usr/bin/cmake -E cmake_link_script CMakeFiles/espressomd_lb.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -pthread -Wl,-rpath,/usr/lib64/python3.9/site-packages/openmpi/espressomd -shared -Wl,-soname,lb.so -o lb.so CMakeFiles/espressomd_lb.dir/lb.cpp.o ../../script_interface/EspressoScriptInterface.so ../../core/shapes/Shapes.so ../../core/cluster_analysis/core_cluster_analysis.so ../../core/io/mpiio/mpiio.so ../../core/io/reader/pdbreader.so ../../core/EspressoCore.so ../../config/EspressoConfig.so /usr/lib64/openmpi/lib/libboost_mpi.so /usr/lib64/libboost_serialization.so ../../pdbparser/pdbparser.so /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so -Wl,-rpath-link,/builddir/build/BUILD/espresso/openmpi/src/core/io/writer:/usr/lib64/openmpi/lib make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' [ 96%] Built target espressomd_lb /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_minimize_energy.dir/build.make src/python/espressomd/CMakeFiles/espressomd_minimize_energy.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' [ 96%] Generating minimize_energy.cpp cd /builddir/build/BUILD/espresso/openmpi/src/python && /usr/bin/cython -3 --cplus --directive embedsignature=True --directive binding=True -I /builddir/build/BUILD/espresso/src/python/espressomd -I /builddir/build/BUILD/espresso/openmpi/src/python/espressomd /builddir/build/BUILD/espresso/src/python/espressomd/minimize_energy.pyx -o /builddir/build/BUILD/espresso/openmpi/src/python/espressomd/minimize_energy.cpp cd /builddir/build/BUILD/espresso/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/espressomd /builddir/build/BUILD/espresso/openmpi /builddir/build/BUILD/espresso/openmpi/src/python/espressomd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/espressomd_minimize_energy.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/espressomd_minimize_energy.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/espressomd_minimize_energy.dir/depend.internal". Dependee "/builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/espressomd_minimize_energy.dir/depend.internal". Scanning dependencies of target espressomd_minimize_energy make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_minimize_energy.dir/build.make src/python/espressomd/CMakeFiles/espressomd_minimize_energy.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' [ 96%] Building CXX object src/python/espressomd/CMakeFiles/espressomd_minimize_energy.dir/minimize_energy.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd && /usr/bin/g++ -DR123_USE_MULHILO64_C99 -Despressomd_minimize_energy_EXPORTS -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/script_interface -I/builddir/build/BUILD/espresso/src/core/io/mpiio -I/builddir/build/BUILD/espresso/src/core/io/reader -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/python3.9 -isystem /usr/lib64/python3.9/site-packages/numpy/core/include -isystem /usr/include/openmpi-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -Wno-pedantic -Wno-cpp -Wno-strict-aliasing -Wno-maybe-uninitialized -Wno-unused-variable -o CMakeFiles/espressomd_minimize_energy.dir/minimize_energy.cpp.o -c /builddir/build/BUILD/espresso/openmpi/src/python/espressomd/minimize_energy.cpp [ 96%] Linking CXX shared library minimize_energy.so cd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd && /usr/bin/cmake -E cmake_link_script CMakeFiles/espressomd_minimize_energy.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -pthread -Wl,-rpath,/usr/lib64/python3.9/site-packages/openmpi/espressomd -shared -Wl,-soname,minimize_energy.so -o minimize_energy.so CMakeFiles/espressomd_minimize_energy.dir/minimize_energy.cpp.o ../../script_interface/EspressoScriptInterface.so ../../core/shapes/Shapes.so ../../core/cluster_analysis/core_cluster_analysis.so ../../core/io/mpiio/mpiio.so ../../core/io/reader/pdbreader.so ../../core/EspressoCore.so ../../config/EspressoConfig.so /usr/lib64/openmpi/lib/libboost_mpi.so /usr/lib64/libboost_serialization.so ../../pdbparser/pdbparser.so /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so -Wl,-rpath-link,/builddir/build/BUILD/espresso/openmpi/src/core/io/writer:/usr/lib64/openmpi/lib make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' [ 96%] Built target espressomd_minimize_energy /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_magnetostatics.dir/build.make src/python/espressomd/CMakeFiles/espressomd_magnetostatics.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' [ 96%] Generating magnetostatics.cpp cd /builddir/build/BUILD/espresso/openmpi/src/python && /usr/bin/cython -3 --cplus --directive embedsignature=True --directive binding=True -I /builddir/build/BUILD/espresso/src/python/espressomd -I /builddir/build/BUILD/espresso/openmpi/src/python/espressomd /builddir/build/BUILD/espresso/src/python/espressomd/magnetostatics.pyx -o /builddir/build/BUILD/espresso/openmpi/src/python/espressomd/magnetostatics.cpp cd /builddir/build/BUILD/espresso/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/espressomd /builddir/build/BUILD/espresso/openmpi /builddir/build/BUILD/espresso/openmpi/src/python/espressomd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/espressomd_magnetostatics.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/espressomd_magnetostatics.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/espressomd_magnetostatics.dir/depend.internal". Dependee "/builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/espressomd_magnetostatics.dir/depend.internal". Scanning dependencies of target espressomd_magnetostatics make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_magnetostatics.dir/build.make src/python/espressomd/CMakeFiles/espressomd_magnetostatics.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' [ 96%] Building CXX object src/python/espressomd/CMakeFiles/espressomd_magnetostatics.dir/magnetostatics.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd && /usr/bin/g++ -DR123_USE_MULHILO64_C99 -Despressomd_magnetostatics_EXPORTS -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/script_interface -I/builddir/build/BUILD/espresso/src/core/io/mpiio -I/builddir/build/BUILD/espresso/src/core/io/reader -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/python3.9 -isystem /usr/lib64/python3.9/site-packages/numpy/core/include -isystem /usr/include/openmpi-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -Wno-pedantic -Wno-cpp -Wno-strict-aliasing -Wno-maybe-uninitialized -Wno-unused-variable -o CMakeFiles/espressomd_magnetostatics.dir/magnetostatics.cpp.o -c /builddir/build/BUILD/espresso/openmpi/src/python/espressomd/magnetostatics.cpp [ 98%] Linking CXX shared library magnetostatics.so cd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd && /usr/bin/cmake -E cmake_link_script CMakeFiles/espressomd_magnetostatics.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -pthread -Wl,-rpath,/usr/lib64/python3.9/site-packages/openmpi/espressomd -shared -Wl,-soname,magnetostatics.so -o magnetostatics.so CMakeFiles/espressomd_magnetostatics.dir/magnetostatics.cpp.o ../../script_interface/EspressoScriptInterface.so ../../core/shapes/Shapes.so ../../core/cluster_analysis/core_cluster_analysis.so ../../core/io/mpiio/mpiio.so ../../core/io/reader/pdbreader.so ../../core/EspressoCore.so ../../config/EspressoConfig.so /usr/lib64/openmpi/lib/libboost_mpi.so /usr/lib64/libboost_serialization.so ../../pdbparser/pdbparser.so /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so -Wl,-rpath-link,/builddir/build/BUILD/espresso/openmpi/src/core/io/writer:/usr/lib64/openmpi/lib make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' [ 98%] Built target espressomd_magnetostatics /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_profiler.dir/build.make src/python/espressomd/CMakeFiles/espressomd_profiler.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' [ 98%] Generating profiler.cpp cd /builddir/build/BUILD/espresso/openmpi/src/python && /usr/bin/cython -3 --cplus --directive embedsignature=True --directive binding=True -I /builddir/build/BUILD/espresso/src/python/espressomd -I /builddir/build/BUILD/espresso/openmpi/src/python/espressomd /builddir/build/BUILD/espresso/src/python/espressomd/profiler.pyx -o /builddir/build/BUILD/espresso/openmpi/src/python/espressomd/profiler.cpp cd /builddir/build/BUILD/espresso/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/espressomd /builddir/build/BUILD/espresso/openmpi /builddir/build/BUILD/espresso/openmpi/src/python/espressomd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/espressomd_profiler.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/espressomd_profiler.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/espressomd_profiler.dir/depend.internal". Dependee "/builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/espressomd_profiler.dir/depend.internal". Scanning dependencies of target espressomd_profiler make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_profiler.dir/build.make src/python/espressomd/CMakeFiles/espressomd_profiler.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' [100%] Building CXX object src/python/espressomd/CMakeFiles/espressomd_profiler.dir/profiler.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd && /usr/bin/g++ -DR123_USE_MULHILO64_C99 -Despressomd_profiler_EXPORTS -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/script_interface -I/builddir/build/BUILD/espresso/src/core/io/mpiio -I/builddir/build/BUILD/espresso/src/core/io/reader -I/builddir/build/BUILD/espresso/src/pdbparser/include -I/builddir/build/BUILD/espresso/src/profiler/include -isystem /usr/include/python3.9 -isystem /usr/lib64/python3.9/site-packages/numpy/core/include -isystem /usr/include/openmpi-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -Wno-pedantic -Wno-cpp -Wno-strict-aliasing -Wno-maybe-uninitialized -Wno-unused-variable -o CMakeFiles/espressomd_profiler.dir/profiler.cpp.o -c /builddir/build/BUILD/espresso/openmpi/src/python/espressomd/profiler.cpp [100%] Linking CXX shared library profiler.so cd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd && /usr/bin/cmake -E cmake_link_script CMakeFiles/espressomd_profiler.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -pthread -Wl,-rpath,/usr/lib64/python3.9/site-packages/openmpi/espressomd -shared -Wl,-soname,profiler.so -o profiler.so CMakeFiles/espressomd_profiler.dir/profiler.cpp.o ../../script_interface/EspressoScriptInterface.so ../../core/shapes/Shapes.so ../../core/cluster_analysis/core_cluster_analysis.so ../../core/io/mpiio/mpiio.so ../../core/io/reader/pdbreader.so ../../core/EspressoCore.so ../../config/EspressoConfig.so /usr/lib64/openmpi/lib/libboost_mpi.so /usr/lib64/libboost_serialization.so ../../pdbparser/pdbparser.so /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so -Wl,-rpath-link,/builddir/build/BUILD/espresso/openmpi/src/core/io/writer:/usr/lib64/openmpi/lib make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' [100%] Built target espressomd_profiler /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_scafacos.dir/build.make src/python/espressomd/CMakeFiles/espressomd_scafacos.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' [100%] Generating scafacos.cpp cd /builddir/build/BUILD/espresso/openmpi/src/python && /usr/bin/cython -3 --cplus --directive embedsignature=True --directive binding=True -I /builddir/build/BUILD/espresso/src/python/espressomd -I /builddir/build/BUILD/espresso/openmpi/src/python/espressomd /builddir/build/BUILD/espresso/src/python/espressomd/scafacos.pyx -o /builddir/build/BUILD/espresso/openmpi/src/python/espressomd/scafacos.cpp cd /builddir/build/BUILD/espresso/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/espressomd /builddir/build/BUILD/espresso/openmpi /builddir/build/BUILD/espresso/openmpi/src/python/espressomd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/espressomd_scafacos.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/espressomd_scafacos.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/espressomd_scafacos.dir/depend.internal". Dependee "/builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/espressomd_scafacos.dir/depend.internal". Scanning dependencies of target espressomd_scafacos make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_scafacos.dir/build.make src/python/espressomd/CMakeFiles/espressomd_scafacos.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' [100%] Building CXX object src/python/espressomd/CMakeFiles/espressomd_scafacos.dir/scafacos.cpp.o cd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd && /usr/bin/g++ -DR123_USE_MULHILO64_C99 -Despressomd_scafacos_EXPORTS -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/openmpi/src/config -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/script_interface -I/builddir/build/BUILD/espresso/src/core/io/mpiio -I/builddir/build/BUILD/espresso/src/core/io/reader -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/python3.9 -isystem /usr/lib64/python3.9/site-packages/numpy/core/include -isystem /usr/include/openmpi-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fPIC -pthread -std=c++14 -Wno-pedantic -Wno-cpp -Wno-strict-aliasing -Wno-maybe-uninitialized -Wno-unused-variable -o CMakeFiles/espressomd_scafacos.dir/scafacos.cpp.o -c /builddir/build/BUILD/espresso/openmpi/src/python/espressomd/scafacos.cpp [100%] Linking CXX shared library scafacos.so cd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd && /usr/bin/cmake -E cmake_link_script CMakeFiles/espressomd_scafacos.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -pthread -Wl,-rpath,/usr/lib64/python3.9/site-packages/openmpi/espressomd -shared -Wl,-soname,scafacos.so -o scafacos.so CMakeFiles/espressomd_scafacos.dir/scafacos.cpp.o ../../script_interface/EspressoScriptInterface.so ../../core/shapes/Shapes.so ../../core/cluster_analysis/core_cluster_analysis.so ../../core/io/mpiio/mpiio.so ../../core/io/reader/pdbreader.so ../../core/EspressoCore.so ../../config/EspressoConfig.so /usr/lib64/openmpi/lib/libboost_mpi.so /usr/lib64/libboost_serialization.so ../../pdbparser/pdbparser.so /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so -Wl,-rpath-link,/builddir/build/BUILD/espresso/openmpi/src/core/io/writer:/usr/lib64/openmpi/lib make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' [100%] Built target espressomd_scafacos /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd.dir/build.make src/python/espressomd/CMakeFiles/espressomd.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' cd /builddir/build/BUILD/espresso/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/espressomd /builddir/build/BUILD/espresso/openmpi /builddir/build/BUILD/espresso/openmpi/src/python/espressomd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/espressomd.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/espressomd.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/espressomd.dir/depend.internal". Dependee "/builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/espressomd.dir/depend.internal". Scanning dependencies of target espressomd make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd.dir/build.make src/python/espressomd/CMakeFiles/espressomd.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' cd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd && /usr/bin/cmake -E copy /builddir/build/BUILD/espresso/src/python/espressomd/__cinit__.py /builddir/build/BUILD/espresso/openmpi/src/python/espressomd//__cinit__.py cd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd && /usr/bin/cmake -E copy /builddir/build/BUILD/espresso/src/python/espressomd/__init__.py /builddir/build/BUILD/espresso/openmpi/src/python/espressomd//__init__.py cd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd && /usr/bin/cmake -E copy /builddir/build/BUILD/espresso/src/python/espressomd/accumulators.py /builddir/build/BUILD/espresso/openmpi/src/python/espressomd//accumulators.py cd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd && /usr/bin/cmake -E copy /builddir/build/BUILD/espresso/src/python/espressomd/checkpointing.py /builddir/build/BUILD/espresso/openmpi/src/python/espressomd//checkpointing.py cd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd && /usr/bin/cmake -E copy /builddir/build/BUILD/espresso/src/python/espressomd/cluster_analysis.py /builddir/build/BUILD/espresso/openmpi/src/python/espressomd//cluster_analysis.py cd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd && /usr/bin/cmake -E copy /builddir/build/BUILD/espresso/src/python/espressomd/comfixed.py /builddir/build/BUILD/espresso/openmpi/src/python/espressomd//comfixed.py cd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd && /usr/bin/cmake -E copy /builddir/build/BUILD/espresso/src/python/espressomd/constraints.py /builddir/build/BUILD/espresso/openmpi/src/python/espressomd//constraints.py cd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd && /usr/bin/cmake -E copy /builddir/build/BUILD/espresso/src/python/espressomd/drude_helpers.py /builddir/build/BUILD/espresso/openmpi/src/python/espressomd//drude_helpers.py cd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd && /usr/bin/cmake -E copy /builddir/build/BUILD/espresso/src/python/espressomd/ekboundaries.py /builddir/build/BUILD/espresso/openmpi/src/python/espressomd//ekboundaries.py cd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd && /usr/bin/cmake -E copy /builddir/build/BUILD/espresso/src/python/espressomd/gen_code_info.py /builddir/build/BUILD/espresso/openmpi/src/python/espressomd//gen_code_info.py cd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd && /usr/bin/cmake -E copy /builddir/build/BUILD/espresso/src/python/espressomd/gen_pxiconfig.py /builddir/build/BUILD/espresso/openmpi/src/python/espressomd//gen_pxiconfig.py cd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd && /usr/bin/cmake -E copy /builddir/build/BUILD/espresso/src/python/espressomd/highlander.py /builddir/build/BUILD/espresso/openmpi/src/python/espressomd//highlander.py cd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd && /usr/bin/cmake -E copy /builddir/build/BUILD/espresso/src/python/espressomd/lbboundaries.py /builddir/build/BUILD/espresso/openmpi/src/python/espressomd//lbboundaries.py cd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd && /usr/bin/cmake -E copy /builddir/build/BUILD/espresso/src/python/espressomd/observables.py /builddir/build/BUILD/espresso/openmpi/src/python/espressomd//observables.py cd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd && /usr/bin/cmake -E copy /builddir/build/BUILD/espresso/src/python/espressomd/pair_criteria.py /builddir/build/BUILD/espresso/openmpi/src/python/espressomd//pair_criteria.py cd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd && /usr/bin/cmake -E copy /builddir/build/BUILD/espresso/src/python/espressomd/shapes.py /builddir/build/BUILD/espresso/openmpi/src/python/espressomd//shapes.py cd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd && /usr/bin/cmake -E copy /builddir/build/BUILD/espresso/src/python/espressomd/virtual_sites.py /builddir/build/BUILD/espresso/openmpi/src/python/espressomd//virtual_sites.py cd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd && /usr/bin/cmake -E copy /builddir/build/BUILD/espresso/src/python/espressomd/io/__init__.py /builddir/build/BUILD/espresso/openmpi/src/python/espressomd/io/__init__.py make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' [100%] Built target espressomd /usr/bin/make -f src/python/CMakeFiles/pypresso.dir/build.make src/python/CMakeFiles/pypresso.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' cd /builddir/build/BUILD/espresso/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python /builddir/build/BUILD/espresso/openmpi /builddir/build/BUILD/espresso/openmpi/src/python /builddir/build/BUILD/espresso/openmpi/src/python/CMakeFiles/pypresso.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/espresso/openmpi/src/python/CMakeFiles/pypresso.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/espresso/openmpi/src/python/CMakeFiles/pypresso.dir/depend.internal". Dependee "/builddir/build/BUILD/espresso/openmpi/src/python/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/espresso/openmpi/src/python/CMakeFiles/pypresso.dir/depend.internal". Scanning dependencies of target pypresso make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' /usr/bin/make -f src/python/CMakeFiles/pypresso.dir/build.make src/python/CMakeFiles/pypresso.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' make[2]: Nothing to be done for 'src/python/CMakeFiles/pypresso.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' [100%] Built target pypresso make[1]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/espresso/openmpi/CMakeFiles 0 + export LDFLAGS= + LDFLAGS= + popd ~/build/BUILD/espresso + module unload mpi/openmpi-x86_64 ++ /usr/share/lmod/lmod/libexec/lmod bash unload mpi/openmpi-x86_64 + eval unset '__LMOD_REF_COUNT_LD_LIBRARY_PATH;' unset 'LD_LIBRARY_PATH;' unset '__LMOD_REF_COUNT_LOADEDMODULES;' unset 'LOADEDMODULES;' '__LMOD_REF_COUNT_MANPATH=/usr/share/lmod/lmod/share/man:1;' export '__LMOD_REF_COUNT_MANPATH;' 'MANPATH=/usr/share/lmod/lmod/share/man;' export 'MANPATH;' 'MODULEPATH=/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core;' export 'MODULEPATH;' unset 'MPI_BIN;' unset 'MPI_COMPILER;' unset 'MPI_FORTRAN_MOD_DIR;' unset 'MPI_HOME;' unset 'MPI_INCLUDE;' unset 'MPI_LIB;' unset 'MPI_MAN;' unset 'MPI_PYTHON3_SITEARCH;' unset 'MPI_SUFFIX;' unset 'MPI_SYSCONFIG;' '__LMOD_REF_COUNT_PATH=/usr/bin:1\;/bin:1\;/usr/sbin:1\;/sbin:1\;/usr/local/sbin:1;' export '__LMOD_REF_COUNT_PATH;' 'PATH=/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin;' export 'PATH;' '__LMOD_REF_COUNT_PKG_CONFIG_PATH=/usr/lib64/pkgconfig:1\;/usr/share/pkgconfig:1;' export '__LMOD_REF_COUNT_PKG_CONFIG_PATH;' 'PKG_CONFIG_PATH=:/usr/lib64/pkgconfig:/usr/share/pkgconfig;' export 'PKG_CONFIG_PATH;' unset '__LMOD_REF_COUNT__LMFILES_;' unset '_LMFILES_;' '_ModuleTable001_=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;' export '_ModuleTable001_;' '_ModuleTable002_=cmUvbG1vZC9sbW9kL21vZHVsZWZpbGVzL0NvcmUiLH0=;' export '_ModuleTable002_;' '_ModuleTable_Sz_=2;' export '_ModuleTable_Sz_;' ++ unset __LMOD_REF_COUNT_LD_LIBRARY_PATH ++ unset LD_LIBRARY_PATH ++ unset __LMOD_REF_COUNT_LOADEDMODULES ++ unset LOADEDMODULES ++ __LMOD_REF_COUNT_MANPATH=/usr/share/lmod/lmod/share/man:1 ++ export __LMOD_REF_COUNT_MANPATH ++ MANPATH=/usr/share/lmod/lmod/share/man ++ export MANPATH ++ MODULEPATH=/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core ++ export MODULEPATH ++ unset MPI_BIN ++ unset MPI_COMPILER ++ unset MPI_FORTRAN_MOD_DIR ++ unset MPI_HOME ++ unset MPI_INCLUDE ++ unset MPI_LIB ++ unset MPI_MAN ++ unset MPI_PYTHON3_SITEARCH ++ unset MPI_SUFFIX ++ unset MPI_SYSCONFIG ++ __LMOD_REF_COUNT_PATH='/usr/bin:1;/bin:1;/usr/sbin:1;/sbin:1;/usr/local/sbin:1' ++ export __LMOD_REF_COUNT_PATH ++ PATH=/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin ++ export PATH ++ __LMOD_REF_COUNT_PKG_CONFIG_PATH='/usr/lib64/pkgconfig:1;/usr/share/pkgconfig:1' ++ export __LMOD_REF_COUNT_PKG_CONFIG_PATH ++ PKG_CONFIG_PATH=:/usr/lib64/pkgconfig:/usr/share/pkgconfig ++ export PKG_CONFIG_PATH ++ unset __LMOD_REF_COUNT__LMFILES_ ++ unset _LMFILES_ ++ _ModuleTable001_=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 ++ export _ModuleTable001_ ++ _ModuleTable002_=cmUvbG1vZC9sbW9kL21vZHVsZWZpbGVzL0NvcmUiLH0= ++ export _ModuleTable002_ ++ _ModuleTable_Sz_=2 ++ export _ModuleTable_Sz_ ++ : -s sh + eval + RPM_EC=0 ++ jobs -p + exit 0 Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.xegoVL + umask 022 + cd /builddir/build/BUILD + '[' /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64 '!=' / ']' + rm -rf /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64 ++ dirname /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64 + mkdir -p /builddir/build/BUILDROOT + mkdir /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64 + cd espresso + for mpi in mpich openmpi + module load mpi/mpich-x86_64 ++ /usr/share/lmod/lmod/libexec/lmod bash load mpi/mpich-x86_64 + eval '__LMOD_REF_COUNT_LD_LIBRARY_PATH=/usr/lib64/mpich/lib:1;' export '__LMOD_REF_COUNT_LD_LIBRARY_PATH;' 'LD_LIBRARY_PATH=/usr/lib64/mpich/lib;' export 'LD_LIBRARY_PATH;' '__LMOD_REF_COUNT_LOADEDMODULES=mpi/mpich-x86_64:1;' export '__LMOD_REF_COUNT_LOADEDMODULES;' 'LOADEDMODULES=mpi/mpich-x86_64;' export 'LOADEDMODULES;' '__LMOD_REF_COUNT_MANPATH=/usr/share/man/mpich-x86_64:1\;/usr/share/lmod/lmod/share/man:1;' export '__LMOD_REF_COUNT_MANPATH;' 'MANPATH=:/usr/share/man/mpich-x86_64:/usr/share/lmod/lmod/share/man;' export 'MANPATH;' '__LMOD_REF_COUNT_MODULEPATH=/etc/modulefiles:1\;/usr/share/modulefiles:1\;/usr/share/modulefiles/Linux:1\;/usr/share/modulefiles/Core:1\;/usr/share/lmod/lmod/modulefiles/Core:1;' export '__LMOD_REF_COUNT_MODULEPATH;' 'MODULEPATH=/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core;' export 'MODULEPATH;' 'MPI_BIN=/usr/lib64/mpich/bin;' export 'MPI_BIN;' 'MPI_COMPILER=mpich-x86_64;' export 'MPI_COMPILER;' 'MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/mpich;' export 'MPI_FORTRAN_MOD_DIR;' 'MPI_HOME=/usr/lib64/mpich;' export 'MPI_HOME;' 'MPI_INCLUDE=/usr/include/mpich-x86_64;' export 'MPI_INCLUDE;' 'MPI_LIB=/usr/lib64/mpich/lib;' export 'MPI_LIB;' 'MPI_MAN=/usr/share/man/mpich-x86_64;' export 'MPI_MAN;' 'MPI_PYTHON2_SITEARCH=%\{python2_sitearch\}/mpich;' export 'MPI_PYTHON2_SITEARCH;' 'MPI_PYTHON3_SITEARCH=/usr/lib64/python3.9/site-packages/mpich;' export 'MPI_PYTHON3_SITEARCH;' 'MPI_PYTHON_SITEARCH=%\{python2_sitearch\}/mpich;' export 'MPI_PYTHON_SITEARCH;' 'MPI_SUFFIX=_mpich;' export 'MPI_SUFFIX;' 'MPI_SYSCONFIG=/etc/mpich-x86_64;' export 'MPI_SYSCONFIG;' '__LMOD_REF_COUNT_PATH=/usr/lib64/mpich/bin:1\;/usr/bin:1\;/bin:1\;/usr/sbin:1\;/sbin:1\;/usr/local/sbin:1;' export '__LMOD_REF_COUNT_PATH;' 'PATH=/usr/lib64/mpich/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin;' export 'PATH;' '__LMOD_REF_COUNT_PKG_CONFIG_PATH=/usr/lib64/mpich/lib/pkgconfig:1\;/usr/lib64/pkgconfig:1\;/usr/share/pkgconfig:1;' export '__LMOD_REF_COUNT_PKG_CONFIG_PATH;' 'PKG_CONFIG_PATH=/usr/lib64/mpich/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig;' export 'PKG_CONFIG_PATH;' '__LMOD_REF_COUNT__LMFILES_=/usr/share/modulefiles/mpi/mpich-x86_64:1;' export '__LMOD_REF_COUNT__LMFILES_;' '_LMFILES_=/usr/share/modulefiles/mpi/mpich-x86_64;' export '_LMFILES_;' '_ModuleTable001_=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;' export '_ModuleTable001_;' '_ModuleTable002_=bGVmaWxlcy9Db3JlIiwiL3Vzci9zaGFyZS9sbW9kL2xtb2QvbW9kdWxlZmlsZXMvQ29yZSIsfSxbInN5c3RlbUJhc2VNUEFUSCJdPSIvZXRjL21vZHVsZWZpbGVzOi91c3Ivc2hhcmUvbW9kdWxlZmlsZXM6L3Vzci9zaGFyZS9tb2R1bGVmaWxlcy9MaW51eDovdXNyL3NoYXJlL21vZHVsZWZpbGVzL0NvcmU6L3Vzci9zaGFyZS9sbW9kL2xtb2QvbW9kdWxlZmlsZXMvQ29yZSIsfQ==;' export '_ModuleTable002_;' '_ModuleTable_Sz_=2;' export '_ModuleTable_Sz_;' ++ __LMOD_REF_COUNT_LD_LIBRARY_PATH=/usr/lib64/mpich/lib:1 ++ export __LMOD_REF_COUNT_LD_LIBRARY_PATH ++ LD_LIBRARY_PATH=/usr/lib64/mpich/lib ++ export LD_LIBRARY_PATH ++ __LMOD_REF_COUNT_LOADEDMODULES=mpi/mpich-x86_64:1 ++ export __LMOD_REF_COUNT_LOADEDMODULES ++ LOADEDMODULES=mpi/mpich-x86_64 ++ export LOADEDMODULES ++ __LMOD_REF_COUNT_MANPATH='/usr/share/man/mpich-x86_64:1;/usr/share/lmod/lmod/share/man:1' ++ export __LMOD_REF_COUNT_MANPATH ++ MANPATH=:/usr/share/man/mpich-x86_64:/usr/share/lmod/lmod/share/man ++ export MANPATH ++ __LMOD_REF_COUNT_MODULEPATH='/etc/modulefiles:1;/usr/share/modulefiles:1;/usr/share/modulefiles/Linux:1;/usr/share/modulefiles/Core:1;/usr/share/lmod/lmod/modulefiles/Core:1' ++ export __LMOD_REF_COUNT_MODULEPATH ++ MODULEPATH=/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core ++ export MODULEPATH ++ MPI_BIN=/usr/lib64/mpich/bin ++ export MPI_BIN ++ MPI_COMPILER=mpich-x86_64 ++ export MPI_COMPILER ++ MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/mpich ++ export MPI_FORTRAN_MOD_DIR ++ MPI_HOME=/usr/lib64/mpich ++ export MPI_HOME ++ MPI_INCLUDE=/usr/include/mpich-x86_64 ++ export MPI_INCLUDE ++ MPI_LIB=/usr/lib64/mpich/lib ++ export MPI_LIB ++ MPI_MAN=/usr/share/man/mpich-x86_64 ++ export MPI_MAN ++ MPI_PYTHON2_SITEARCH='%{python2_sitearch}/mpich' ++ export MPI_PYTHON2_SITEARCH ++ MPI_PYTHON3_SITEARCH=/usr/lib64/python3.9/site-packages/mpich ++ export MPI_PYTHON3_SITEARCH ++ MPI_PYTHON_SITEARCH='%{python2_sitearch}/mpich' ++ export MPI_PYTHON_SITEARCH ++ MPI_SUFFIX=_mpich ++ export MPI_SUFFIX ++ MPI_SYSCONFIG=/etc/mpich-x86_64 ++ export MPI_SYSCONFIG ++ __LMOD_REF_COUNT_PATH='/usr/lib64/mpich/bin:1;/usr/bin:1;/bin:1;/usr/sbin:1;/sbin:1;/usr/local/sbin:1' ++ export __LMOD_REF_COUNT_PATH ++ PATH=/usr/lib64/mpich/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin ++ export PATH ++ __LMOD_REF_COUNT_PKG_CONFIG_PATH='/usr/lib64/mpich/lib/pkgconfig:1;/usr/lib64/pkgconfig:1;/usr/share/pkgconfig:1' ++ export __LMOD_REF_COUNT_PKG_CONFIG_PATH ++ PKG_CONFIG_PATH=/usr/lib64/mpich/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig ++ export PKG_CONFIG_PATH ++ __LMOD_REF_COUNT__LMFILES_=/usr/share/modulefiles/mpi/mpich-x86_64:1 ++ export __LMOD_REF_COUNT__LMFILES_ ++ _LMFILES_=/usr/share/modulefiles/mpi/mpich-x86_64 ++ export _LMFILES_ ++ _ModuleTable001_=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 ++ export _ModuleTable001_ ++ _ModuleTable002_=bGVmaWxlcy9Db3JlIiwiL3Vzci9zaGFyZS9sbW9kL2xtb2QvbW9kdWxlZmlsZXMvQ29yZSIsfSxbInN5c3RlbUJhc2VNUEFUSCJdPSIvZXRjL21vZHVsZWZpbGVzOi91c3Ivc2hhcmUvbW9kdWxlZmlsZXM6L3Vzci9zaGFyZS9tb2R1bGVmaWxlcy9MaW51eDovdXNyL3NoYXJlL21vZHVsZWZpbGVzL0NvcmU6L3Vzci9zaGFyZS9sbW9kL2xtb2QvbW9kdWxlZmlsZXMvQ29yZSIsfQ== ++ export _ModuleTable002_ ++ _ModuleTable_Sz_=2 ++ export _ModuleTable_Sz_ ++ : -s sh + eval + /usr/bin/make install DESTDIR=/builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64 'INSTALL=/usr/bin/install -p' -C mpich make: Entering directory '/builddir/build/BUILD/espresso/mpich' /usr/bin/cmake -S/builddir/build/BUILD/espresso -B/builddir/build/BUILD/espresso/mpich --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/espresso/mpich/CMakeFiles /builddir/build/BUILD/espresso/mpich/CMakeFiles/progress.marks /usr/bin/make -f CMakeFiles/Makefile2 all make[1]: Entering directory '/builddir/build/BUILD/espresso/mpich' /usr/bin/make -f src/pdbparser/CMakeFiles/pdbparser.dir/build.make src/pdbparser/CMakeFiles/pdbparser.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/pdbparser /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/pdbparser /builddir/build/BUILD/espresso/mpich/src/pdbparser/CMakeFiles/pdbparser.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' /usr/bin/make -f src/pdbparser/CMakeFiles/pdbparser.dir/build.make src/pdbparser/CMakeFiles/pdbparser.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' make[2]: Nothing to be done for 'src/pdbparser/CMakeFiles/pdbparser.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 1%] Built target pdbparser /usr/bin/make -f src/config/CMakeFiles/generate_config_features.dir/build.make src/config/CMakeFiles/generate_config_features.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/config /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/config /builddir/build/BUILD/espresso/mpich/src/config/CMakeFiles/generate_config_features.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' /usr/bin/make -f src/config/CMakeFiles/generate_config_features.dir/build.make src/config/CMakeFiles/generate_config_features.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' make[2]: Nothing to be done for 'src/config/CMakeFiles/generate_config_features.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 1%] Built target generate_config_features /usr/bin/make -f CMakeFiles/myconfig.dir/build.make CMakeFiles/myconfig.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/CMakeFiles/myconfig.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' /usr/bin/make -f CMakeFiles/myconfig.dir/build.make CMakeFiles/myconfig.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' make[2]: Nothing to be done for 'CMakeFiles/myconfig.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 1%] Built target myconfig /usr/bin/make -f src/config/CMakeFiles/version.dir/build.make src/config/CMakeFiles/version.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/config /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/config /builddir/build/BUILD/espresso/mpich/src/config/CMakeFiles/version.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' /usr/bin/make -f src/config/CMakeFiles/version.dir/build.make src/config/CMakeFiles/version.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich/src/config && /usr/bin/cmake -DPROJECT_SOURCE_DIR=/builddir/build/BUILD/espresso -DPROJECT_VERSION=4.1.2 -DGIT_EXECUTABLE=GIT_EXECUTABLE-NOTFOUND -P /builddir/build/BUILD/espresso/cmake/version.cmake make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 1%] Built target version /usr/bin/make -f src/config/CMakeFiles/check_myconfig.dir/build.make src/config/CMakeFiles/check_myconfig.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/config /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/config /builddir/build/BUILD/espresso/mpich/src/config/CMakeFiles/check_myconfig.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' /usr/bin/make -f src/config/CMakeFiles/check_myconfig.dir/build.make src/config/CMakeFiles/check_myconfig.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich/src/config && /usr/bin/python3 /builddir/build/BUILD/espresso/src/config/check_myconfig.py /usr/bin/g++ /builddir/build/BUILD/espresso/src/config/features.def /builddir/build/BUILD/espresso/mpich/src/config/myconfig-final.hpp cmake_config.hpp make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 1%] Built target check_myconfig /usr/bin/make -f src/config/CMakeFiles/EspressoConfig.dir/build.make src/config/CMakeFiles/EspressoConfig.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/config /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/config /builddir/build/BUILD/espresso/mpich/src/config/CMakeFiles/EspressoConfig.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' /usr/bin/make -f src/config/CMakeFiles/EspressoConfig.dir/build.make src/config/CMakeFiles/EspressoConfig.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' make[2]: Nothing to be done for 'src/config/CMakeFiles/EspressoConfig.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 1%] Built target EspressoConfig /usr/bin/make -f src/core/CMakeFiles/EspressoCore.dir/build.make src/core/CMakeFiles/EspressoCore.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/core /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/core /builddir/build/BUILD/espresso/mpich/src/core/CMakeFiles/EspressoCore.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' /usr/bin/make -f src/core/CMakeFiles/EspressoCore.dir/build.make src/core/CMakeFiles/EspressoCore.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' make[2]: Nothing to be done for 'src/core/CMakeFiles/EspressoCore.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 45%] Built target EspressoCore /usr/bin/make -f src/core/io/writer/CMakeFiles/H5mdCore.dir/build.make src/core/io/writer/CMakeFiles/H5mdCore.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/core/io/writer /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/core/io/writer /builddir/build/BUILD/espresso/mpich/src/core/io/writer/CMakeFiles/H5mdCore.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' /usr/bin/make -f src/core/io/writer/CMakeFiles/H5mdCore.dir/build.make src/core/io/writer/CMakeFiles/H5mdCore.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' make[2]: Nothing to be done for 'src/core/io/writer/CMakeFiles/H5mdCore.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 46%] Built target H5mdCore /usr/bin/make -f src/core/io/reader/CMakeFiles/pdbreader.dir/build.make src/core/io/reader/CMakeFiles/pdbreader.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/core/io/reader /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/core/io/reader /builddir/build/BUILD/espresso/mpich/src/core/io/reader/CMakeFiles/pdbreader.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' /usr/bin/make -f src/core/io/reader/CMakeFiles/pdbreader.dir/build.make src/core/io/reader/CMakeFiles/pdbreader.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' make[2]: Nothing to be done for 'src/core/io/reader/CMakeFiles/pdbreader.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 46%] Built target pdbreader /usr/bin/make -f src/core/io/mpiio/CMakeFiles/mpiio.dir/build.make src/core/io/mpiio/CMakeFiles/mpiio.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/core/io/mpiio /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/core/io/mpiio /builddir/build/BUILD/espresso/mpich/src/core/io/mpiio/CMakeFiles/mpiio.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' /usr/bin/make -f src/core/io/mpiio/CMakeFiles/mpiio.dir/build.make src/core/io/mpiio/CMakeFiles/mpiio.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' make[2]: Nothing to be done for 'src/core/io/mpiio/CMakeFiles/mpiio.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 46%] Built target mpiio /usr/bin/make -f src/core/shapes/CMakeFiles/Shapes.dir/build.make src/core/shapes/CMakeFiles/Shapes.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/core/shapes /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/core/shapes /builddir/build/BUILD/espresso/mpich/src/core/shapes/CMakeFiles/Shapes.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' /usr/bin/make -f src/core/shapes/CMakeFiles/Shapes.dir/build.make src/core/shapes/CMakeFiles/Shapes.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' make[2]: Nothing to be done for 'src/core/shapes/CMakeFiles/Shapes.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 51%] Built target Shapes /usr/bin/make -f src/core/cluster_analysis/CMakeFiles/core_cluster_analysis.dir/build.make src/core/cluster_analysis/CMakeFiles/core_cluster_analysis.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/core/cluster_analysis /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/core/cluster_analysis /builddir/build/BUILD/espresso/mpich/src/core/cluster_analysis/CMakeFiles/core_cluster_analysis.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' /usr/bin/make -f src/core/cluster_analysis/CMakeFiles/core_cluster_analysis.dir/build.make src/core/cluster_analysis/CMakeFiles/core_cluster_analysis.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' make[2]: Nothing to be done for 'src/core/cluster_analysis/CMakeFiles/core_cluster_analysis.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 53%] Built target core_cluster_analysis /usr/bin/make -f src/script_interface/CMakeFiles/EspressoScriptInterface.dir/build.make src/script_interface/CMakeFiles/EspressoScriptInterface.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/script_interface /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/script_interface /builddir/build/BUILD/espresso/mpich/src/script_interface/CMakeFiles/EspressoScriptInterface.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' /usr/bin/make -f src/script_interface/CMakeFiles/EspressoScriptInterface.dir/build.make src/script_interface/CMakeFiles/EspressoScriptInterface.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' make[2]: Nothing to be done for 'src/script_interface/CMakeFiles/EspressoScriptInterface.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 57%] Built target EspressoScriptInterface /usr/bin/make -f src/python/object_in_fluid/CMakeFiles/object_in_fluid.dir/build.make src/python/object_in_fluid/CMakeFiles/object_in_fluid.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/object_in_fluid /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/python/object_in_fluid /builddir/build/BUILD/espresso/mpich/src/python/object_in_fluid/CMakeFiles/object_in_fluid.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' /usr/bin/make -f src/python/object_in_fluid/CMakeFiles/object_in_fluid.dir/build.make src/python/object_in_fluid/CMakeFiles/object_in_fluid.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich/src/python/object_in_fluid && /usr/bin/cmake -E copy /builddir/build/BUILD/espresso/src/python/object_in_fluid/__init__.py /builddir/build/BUILD/espresso/mpich/src/python/object_in_fluid//__init__.py cd /builddir/build/BUILD/espresso/mpich/src/python/object_in_fluid && /usr/bin/cmake -E copy /builddir/build/BUILD/espresso/src/python/object_in_fluid/oif_classes.py /builddir/build/BUILD/espresso/mpich/src/python/object_in_fluid//oif_classes.py cd /builddir/build/BUILD/espresso/mpich/src/python/object_in_fluid && /usr/bin/cmake -E copy /builddir/build/BUILD/espresso/src/python/object_in_fluid/oif_utils.py /builddir/build/BUILD/espresso/mpich/src/python/object_in_fluid//oif_utils.py make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 57%] Built target object_in_fluid /usr/bin/make -f src/python/espressomd/CMakeFiles/gen_pxiconfig.dir/build.make src/python/espressomd/CMakeFiles/gen_pxiconfig.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/espressomd /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/python/espressomd /builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/gen_pxiconfig.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' /usr/bin/make -f src/python/espressomd/CMakeFiles/gen_pxiconfig.dir/build.make src/python/espressomd/CMakeFiles/gen_pxiconfig.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' make[2]: Nothing to be done for 'src/python/espressomd/CMakeFiles/gen_pxiconfig.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 59%] Built target gen_pxiconfig /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_thermostat.dir/build.make src/python/espressomd/CMakeFiles/espressomd_thermostat.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/espressomd /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/python/espressomd /builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_thermostat.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_thermostat.dir/build.make src/python/espressomd/CMakeFiles/espressomd_thermostat.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' make[2]: Nothing to be done for 'src/python/espressomd/CMakeFiles/espressomd_thermostat.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 60%] Built target espressomd_thermostat /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_code_info.dir/build.make src/python/espressomd/CMakeFiles/espressomd_code_info.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/espressomd /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/python/espressomd /builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_code_info.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_code_info.dir/build.make src/python/espressomd/CMakeFiles/espressomd_code_info.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' make[2]: Nothing to be done for 'src/python/espressomd/CMakeFiles/espressomd_code_info.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 62%] Built target espressomd_code_info /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_visualization_opengl.dir/build.make src/python/espressomd/CMakeFiles/espressomd_visualization_opengl.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/espressomd /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/python/espressomd /builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_visualization_opengl.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_visualization_opengl.dir/build.make src/python/espressomd/CMakeFiles/espressomd_visualization_opengl.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' make[2]: Nothing to be done for 'src/python/espressomd/CMakeFiles/espressomd_visualization_opengl.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 64%] Built target espressomd_visualization_opengl /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_visualization_mayavi.dir/build.make src/python/espressomd/CMakeFiles/espressomd_visualization_mayavi.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/espressomd /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/python/espressomd /builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_visualization_mayavi.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_visualization_mayavi.dir/build.make src/python/espressomd/CMakeFiles/espressomd_visualization_mayavi.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' make[2]: Nothing to be done for 'src/python/espressomd/CMakeFiles/espressomd_visualization_mayavi.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 65%] Built target espressomd_visualization_mayavi /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_visualization.dir/build.make src/python/espressomd/CMakeFiles/espressomd_visualization.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/espressomd /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/python/espressomd /builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_visualization.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_visualization.dir/build.make src/python/espressomd/CMakeFiles/espressomd_visualization.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' make[2]: Nothing to be done for 'src/python/espressomd/CMakeFiles/espressomd_visualization.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 65%] Built target espressomd_visualization /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_version.dir/build.make src/python/espressomd/CMakeFiles/espressomd_version.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/espressomd /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/python/espressomd /builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_version.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_version.dir/build.make src/python/espressomd/CMakeFiles/espressomd_version.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' make[2]: Nothing to be done for 'src/python/espressomd/CMakeFiles/espressomd_version.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 67%] Built target espressomd_version /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_system.dir/build.make src/python/espressomd/CMakeFiles/espressomd_system.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/espressomd /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/python/espressomd /builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_system.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_system.dir/build.make src/python/espressomd/CMakeFiles/espressomd_system.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' make[2]: Nothing to be done for 'src/python/espressomd/CMakeFiles/espressomd_system.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 68%] Built target espressomd_system /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_electrostatic_extensions.dir/build.make src/python/espressomd/CMakeFiles/espressomd_electrostatic_extensions.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/espressomd /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/python/espressomd /builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_electrostatic_extensions.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_electrostatic_extensions.dir/build.make src/python/espressomd/CMakeFiles/espressomd_electrostatic_extensions.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' make[2]: Nothing to be done for 'src/python/espressomd/CMakeFiles/espressomd_electrostatic_extensions.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 70%] Built target espressomd_electrostatic_extensions /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_utils.dir/build.make src/python/espressomd/CMakeFiles/espressomd_utils.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/espressomd /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/python/espressomd /builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_utils.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_utils.dir/build.make src/python/espressomd/CMakeFiles/espressomd_utils.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' make[2]: Nothing to be done for 'src/python/espressomd/CMakeFiles/espressomd_utils.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 71%] Built target espressomd_utils /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_electrokinetics.dir/build.make src/python/espressomd/CMakeFiles/espressomd_electrokinetics.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/espressomd /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/python/espressomd /builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_electrokinetics.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_electrokinetics.dir/build.make src/python/espressomd/CMakeFiles/espressomd_electrokinetics.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' make[2]: Nothing to be done for 'src/python/espressomd/CMakeFiles/espressomd_electrokinetics.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 73%] Built target espressomd_electrokinetics /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_cellsystem.dir/build.make src/python/espressomd/CMakeFiles/espressomd_cellsystem.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/espressomd /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/python/espressomd /builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_cellsystem.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_cellsystem.dir/build.make src/python/espressomd/CMakeFiles/espressomd_cellsystem.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' make[2]: Nothing to be done for 'src/python/espressomd/CMakeFiles/espressomd_cellsystem.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 75%] Built target espressomd_cellsystem /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_electrostatics.dir/build.make src/python/espressomd/CMakeFiles/espressomd_electrostatics.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/espressomd /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/python/espressomd /builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_electrostatics.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_electrostatics.dir/build.make src/python/espressomd/CMakeFiles/espressomd_electrostatics.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' make[2]: Nothing to be done for 'src/python/espressomd/CMakeFiles/espressomd_electrostatics.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 76%] Built target espressomd_electrostatics /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_diamond.dir/build.make src/python/espressomd/CMakeFiles/espressomd_diamond.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/espressomd /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/python/espressomd /builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_diamond.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_diamond.dir/build.make src/python/espressomd/CMakeFiles/espressomd_diamond.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' make[2]: Nothing to be done for 'src/python/espressomd/CMakeFiles/espressomd_diamond.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 76%] Built target espressomd_diamond /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_cuda_init.dir/build.make src/python/espressomd/CMakeFiles/espressomd_cuda_init.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/espressomd /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/python/espressomd /builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_cuda_init.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_cuda_init.dir/build.make src/python/espressomd/CMakeFiles/espressomd_cuda_init.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' make[2]: Nothing to be done for 'src/python/espressomd/CMakeFiles/espressomd_cuda_init.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 78%] Built target espressomd_cuda_init /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_integrate.dir/build.make src/python/espressomd/CMakeFiles/espressomd_integrate.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/espressomd /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/python/espressomd /builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_integrate.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_integrate.dir/build.make src/python/espressomd/CMakeFiles/espressomd_integrate.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' make[2]: Nothing to be done for 'src/python/espressomd/CMakeFiles/espressomd_integrate.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 79%] Built target espressomd_integrate /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_actors.dir/build.make src/python/espressomd/CMakeFiles/espressomd_actors.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/espressomd /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/python/espressomd /builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_actors.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_actors.dir/build.make src/python/espressomd/CMakeFiles/espressomd_actors.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' make[2]: Nothing to be done for 'src/python/espressomd/CMakeFiles/espressomd_actors.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 81%] Built target espressomd_actors /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd__init.dir/build.make src/python/espressomd/CMakeFiles/espressomd__init.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/espressomd /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/python/espressomd /builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd__init.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd__init.dir/build.make src/python/espressomd/CMakeFiles/espressomd__init.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' make[2]: Nothing to be done for 'src/python/espressomd/CMakeFiles/espressomd__init.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 81%] Built target espressomd__init /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_polymer.dir/build.make src/python/espressomd/CMakeFiles/espressomd_polymer.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/espressomd /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/python/espressomd /builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_polymer.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_polymer.dir/build.make src/python/espressomd/CMakeFiles/espressomd_polymer.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' make[2]: Nothing to be done for 'src/python/espressomd/CMakeFiles/espressomd_polymer.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 82%] Built target espressomd_polymer /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_galilei.dir/build.make src/python/espressomd/CMakeFiles/espressomd_galilei.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/espressomd /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/python/espressomd /builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_galilei.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_galilei.dir/build.make src/python/espressomd/CMakeFiles/espressomd_galilei.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' make[2]: Nothing to be done for 'src/python/espressomd/CMakeFiles/espressomd_galilei.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 84%] Built target espressomd_galilei /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_reaction_ensemble.dir/build.make src/python/espressomd/CMakeFiles/espressomd_reaction_ensemble.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/espressomd /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/python/espressomd /builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_reaction_ensemble.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_reaction_ensemble.dir/build.make src/python/espressomd/CMakeFiles/espressomd_reaction_ensemble.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' make[2]: Nothing to be done for 'src/python/espressomd/CMakeFiles/espressomd_reaction_ensemble.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 85%] Built target espressomd_reaction_ensemble /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_analyze.dir/build.make src/python/espressomd/CMakeFiles/espressomd_analyze.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/espressomd /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/python/espressomd /builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_analyze.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_analyze.dir/build.make src/python/espressomd/CMakeFiles/espressomd_analyze.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' make[2]: Nothing to be done for 'src/python/espressomd/CMakeFiles/espressomd_analyze.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 87%] Built target espressomd_analyze /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_particle_data.dir/build.make src/python/espressomd/CMakeFiles/espressomd_particle_data.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/espressomd /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/python/espressomd /builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_particle_data.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_particle_data.dir/build.make src/python/espressomd/CMakeFiles/espressomd_particle_data.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' make[2]: Nothing to be done for 'src/python/espressomd/CMakeFiles/espressomd_particle_data.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 89%] Built target espressomd_particle_data /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_collision_detection.dir/build.make src/python/espressomd/CMakeFiles/espressomd_collision_detection.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/espressomd /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/python/espressomd /builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_collision_detection.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_collision_detection.dir/build.make src/python/espressomd/CMakeFiles/espressomd_collision_detection.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' make[2]: Nothing to be done for 'src/python/espressomd/CMakeFiles/espressomd_collision_detection.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 90%] Built target espressomd_collision_detection /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_script_interface.dir/build.make src/python/espressomd/CMakeFiles/espressomd_script_interface.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/espressomd /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/python/espressomd /builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_script_interface.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_script_interface.dir/build.make src/python/espressomd/CMakeFiles/espressomd_script_interface.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' make[2]: Nothing to be done for 'src/python/espressomd/CMakeFiles/espressomd_script_interface.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 92%] Built target espressomd_script_interface /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_globals.dir/build.make src/python/espressomd/CMakeFiles/espressomd_globals.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/espressomd /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/python/espressomd /builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_globals.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_globals.dir/build.make src/python/espressomd/CMakeFiles/espressomd_globals.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' make[2]: Nothing to be done for 'src/python/espressomd/CMakeFiles/espressomd_globals.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 92%] Built target espressomd_globals /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_magnetostatic_extensions.dir/build.make src/python/espressomd/CMakeFiles/espressomd_magnetostatic_extensions.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/espressomd /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/python/espressomd /builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_magnetostatic_extensions.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_magnetostatic_extensions.dir/build.make src/python/espressomd/CMakeFiles/espressomd_magnetostatic_extensions.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' make[2]: Nothing to be done for 'src/python/espressomd/CMakeFiles/espressomd_magnetostatic_extensions.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 93%] Built target espressomd_magnetostatic_extensions /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_interactions.dir/build.make src/python/espressomd/CMakeFiles/espressomd_interactions.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/espressomd /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/python/espressomd /builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_interactions.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_interactions.dir/build.make src/python/espressomd/CMakeFiles/espressomd_interactions.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' make[2]: Nothing to be done for 'src/python/espressomd/CMakeFiles/espressomd_interactions.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 95%] Built target espressomd_interactions /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_lb.dir/build.make src/python/espressomd/CMakeFiles/espressomd_lb.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/espressomd /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/python/espressomd /builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_lb.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_lb.dir/build.make src/python/espressomd/CMakeFiles/espressomd_lb.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' make[2]: Nothing to be done for 'src/python/espressomd/CMakeFiles/espressomd_lb.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 96%] Built target espressomd_lb /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_minimize_energy.dir/build.make src/python/espressomd/CMakeFiles/espressomd_minimize_energy.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/espressomd /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/python/espressomd /builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_minimize_energy.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_minimize_energy.dir/build.make src/python/espressomd/CMakeFiles/espressomd_minimize_energy.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' make[2]: Nothing to be done for 'src/python/espressomd/CMakeFiles/espressomd_minimize_energy.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 96%] Built target espressomd_minimize_energy /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_magnetostatics.dir/build.make src/python/espressomd/CMakeFiles/espressomd_magnetostatics.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/espressomd /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/python/espressomd /builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_magnetostatics.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_magnetostatics.dir/build.make src/python/espressomd/CMakeFiles/espressomd_magnetostatics.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' make[2]: Nothing to be done for 'src/python/espressomd/CMakeFiles/espressomd_magnetostatics.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 98%] Built target espressomd_magnetostatics /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_profiler.dir/build.make src/python/espressomd/CMakeFiles/espressomd_profiler.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/espressomd /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/python/espressomd /builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_profiler.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_profiler.dir/build.make src/python/espressomd/CMakeFiles/espressomd_profiler.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' make[2]: Nothing to be done for 'src/python/espressomd/CMakeFiles/espressomd_profiler.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [100%] Built target espressomd_profiler /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_scafacos.dir/build.make src/python/espressomd/CMakeFiles/espressomd_scafacos.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/espressomd /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/python/espressomd /builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_scafacos.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_scafacos.dir/build.make src/python/espressomd/CMakeFiles/espressomd_scafacos.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' make[2]: Nothing to be done for 'src/python/espressomd/CMakeFiles/espressomd_scafacos.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [100%] Built target espressomd_scafacos /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd.dir/build.make src/python/espressomd/CMakeFiles/espressomd.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/espressomd /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/python/espressomd /builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd.dir/build.make src/python/espressomd/CMakeFiles/espressomd.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich/src/python/espressomd && /usr/bin/cmake -E copy /builddir/build/BUILD/espresso/src/python/espressomd/__cinit__.py /builddir/build/BUILD/espresso/mpich/src/python/espressomd//__cinit__.py cd /builddir/build/BUILD/espresso/mpich/src/python/espressomd && /usr/bin/cmake -E copy /builddir/build/BUILD/espresso/src/python/espressomd/__init__.py /builddir/build/BUILD/espresso/mpich/src/python/espressomd//__init__.py cd /builddir/build/BUILD/espresso/mpich/src/python/espressomd && /usr/bin/cmake -E copy /builddir/build/BUILD/espresso/src/python/espressomd/accumulators.py /builddir/build/BUILD/espresso/mpich/src/python/espressomd//accumulators.py cd /builddir/build/BUILD/espresso/mpich/src/python/espressomd && /usr/bin/cmake -E copy /builddir/build/BUILD/espresso/src/python/espressomd/checkpointing.py /builddir/build/BUILD/espresso/mpich/src/python/espressomd//checkpointing.py cd /builddir/build/BUILD/espresso/mpich/src/python/espressomd && /usr/bin/cmake -E copy /builddir/build/BUILD/espresso/src/python/espressomd/cluster_analysis.py /builddir/build/BUILD/espresso/mpich/src/python/espressomd//cluster_analysis.py cd /builddir/build/BUILD/espresso/mpich/src/python/espressomd && /usr/bin/cmake -E copy /builddir/build/BUILD/espresso/src/python/espressomd/comfixed.py /builddir/build/BUILD/espresso/mpich/src/python/espressomd//comfixed.py cd /builddir/build/BUILD/espresso/mpich/src/python/espressomd && /usr/bin/cmake -E copy /builddir/build/BUILD/espresso/src/python/espressomd/constraints.py /builddir/build/BUILD/espresso/mpich/src/python/espressomd//constraints.py cd /builddir/build/BUILD/espresso/mpich/src/python/espressomd && /usr/bin/cmake -E copy /builddir/build/BUILD/espresso/src/python/espressomd/drude_helpers.py /builddir/build/BUILD/espresso/mpich/src/python/espressomd//drude_helpers.py cd /builddir/build/BUILD/espresso/mpich/src/python/espressomd && /usr/bin/cmake -E copy /builddir/build/BUILD/espresso/src/python/espressomd/ekboundaries.py /builddir/build/BUILD/espresso/mpich/src/python/espressomd//ekboundaries.py cd /builddir/build/BUILD/espresso/mpich/src/python/espressomd && /usr/bin/cmake -E copy /builddir/build/BUILD/espresso/src/python/espressomd/gen_code_info.py /builddir/build/BUILD/espresso/mpich/src/python/espressomd//gen_code_info.py cd /builddir/build/BUILD/espresso/mpich/src/python/espressomd && /usr/bin/cmake -E copy /builddir/build/BUILD/espresso/src/python/espressomd/gen_pxiconfig.py /builddir/build/BUILD/espresso/mpich/src/python/espressomd//gen_pxiconfig.py cd /builddir/build/BUILD/espresso/mpich/src/python/espressomd && /usr/bin/cmake -E copy /builddir/build/BUILD/espresso/src/python/espressomd/highlander.py /builddir/build/BUILD/espresso/mpich/src/python/espressomd//highlander.py cd /builddir/build/BUILD/espresso/mpich/src/python/espressomd && /usr/bin/cmake -E copy /builddir/build/BUILD/espresso/src/python/espressomd/lbboundaries.py /builddir/build/BUILD/espresso/mpich/src/python/espressomd//lbboundaries.py cd /builddir/build/BUILD/espresso/mpich/src/python/espressomd && /usr/bin/cmake -E copy /builddir/build/BUILD/espresso/src/python/espressomd/observables.py /builddir/build/BUILD/espresso/mpich/src/python/espressomd//observables.py cd /builddir/build/BUILD/espresso/mpich/src/python/espressomd && /usr/bin/cmake -E copy /builddir/build/BUILD/espresso/src/python/espressomd/pair_criteria.py /builddir/build/BUILD/espresso/mpich/src/python/espressomd//pair_criteria.py cd /builddir/build/BUILD/espresso/mpich/src/python/espressomd && /usr/bin/cmake -E copy /builddir/build/BUILD/espresso/src/python/espressomd/shapes.py /builddir/build/BUILD/espresso/mpich/src/python/espressomd//shapes.py cd /builddir/build/BUILD/espresso/mpich/src/python/espressomd && /usr/bin/cmake -E copy /builddir/build/BUILD/espresso/src/python/espressomd/virtual_sites.py /builddir/build/BUILD/espresso/mpich/src/python/espressomd//virtual_sites.py cd /builddir/build/BUILD/espresso/mpich/src/python/espressomd && /usr/bin/cmake -E copy /builddir/build/BUILD/espresso/src/python/espressomd/io/__init__.py /builddir/build/BUILD/espresso/mpich/src/python/espressomd/io/__init__.py make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [100%] Built target espressomd /usr/bin/make -f src/python/CMakeFiles/pypresso.dir/build.make src/python/CMakeFiles/pypresso.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/python /builddir/build/BUILD/espresso/mpich/src/python/CMakeFiles/pypresso.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' /usr/bin/make -f src/python/CMakeFiles/pypresso.dir/build.make src/python/CMakeFiles/pypresso.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' make[2]: Nothing to be done for 'src/python/CMakeFiles/pypresso.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [100%] Built target pypresso make[1]: Leaving directory '/builddir/build/BUILD/espresso/mpich' /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/espresso/mpich/CMakeFiles 0 /usr/bin/make -f CMakeFiles/Makefile2 preinstall make[1]: Entering directory '/builddir/build/BUILD/espresso/mpich' make[1]: Nothing to be done for 'preinstall'. make[1]: Leaving directory '/builddir/build/BUILD/espresso/mpich' Install the project... /usr/bin/cmake -P cmake_install.cmake -- Install configuration: "Release" -- Installing: /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/mpich/espressomd/EspressoCore.so -- Installing: /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/mpich/espressomd/H5mdCore.so -- Installing: /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/mpich/espressomd/pdbreader.so -- Installing: /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/mpich/espressomd/mpiio.so -- Installing: /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/mpich/espressomd/Shapes.so -- Installing: /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/mpich/espressomd/core_cluster_analysis.so -- Installing: /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/mpich/espressomd/EspressoConfig.so -- Installing: /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/mpich/espressomd/pdbparser.so -- Installing: /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/mpich/espressomd/EspressoScriptInterface.so -- Installing: /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/mpich/espressomd/_init.so -- Installing: /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/mpich/espressomd/actors.so -- Installing: /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/mpich/espressomd/analyze.so -- Installing: /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/mpich/espressomd/cellsystem.so -- Installing: /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/mpich/espressomd/collision_detection.so -- Installing: /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/mpich/espressomd/cuda_init.so -- Installing: /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/mpich/espressomd/diamond.so -- Installing: /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/mpich/espressomd/electrokinetics.so -- Installing: /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/mpich/espressomd/electrostatic_extensions.so -- Installing: /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/mpich/espressomd/electrostatics.so -- Installing: /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/mpich/espressomd/galilei.so -- Installing: /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/mpich/espressomd/globals.so -- Installing: /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/mpich/espressomd/integrate.so -- Installing: /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/mpich/espressomd/interactions.so -- Installing: /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/mpich/espressomd/lb.so -- Installing: /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/mpich/espressomd/magnetostatic_extensions.so -- Installing: /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/mpich/espressomd/magnetostatics.so -- Installing: /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/mpich/espressomd/minimize_energy.so -- Installing: /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/mpich/espressomd/particle_data.so -- Installing: /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/mpich/espressomd/polymer.so -- Installing: /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/mpich/espressomd/profiler.so -- Installing: /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/mpich/espressomd/reaction_ensemble.so -- Installing: /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/mpich/espressomd/scafacos.so -- Installing: /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/mpich/espressomd/script_interface.so -- Installing: /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/mpich/espressomd/system.so -- Installing: /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/mpich/espressomd/thermostat.so -- Installing: /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/mpich/espressomd/utils.so -- Installing: /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/mpich/espressomd/version.so -- Installing: /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/mpich/espressomd/visualization.so -- Installing: /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/mpich/espressomd/visualization_mayavi.so -- Installing: /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/mpich/espressomd/visualization_opengl.so -- Installing: /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/mpich/espressomd/code_info.so -- Up-to-date: /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/mpich/espressomd -- Installing: /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/mpich/espressomd/MDA_ESP -- Installing: /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/mpich/espressomd/MDA_ESP/__init__.py -- Installing: /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/mpich/espressomd/io -- Installing: /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/mpich/espressomd/io/mpiio.py -- Installing: /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/mpich/espressomd/io/writer -- Installing: /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/mpich/espressomd/io/writer/__init__.py -- Installing: /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/mpich/espressomd/io/writer/vtf.py -- Installing: /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/mpich/espressomd/io/writer/h5md.py -- Installing: /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/mpich/espressomd/io/__init__.py -- Installing: /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/mpich/espressomd/ekboundaries.py -- Installing: /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/mpich/espressomd/gen_code_info.py -- Installing: /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/mpich/espressomd/gen_pxiconfig.py -- Installing: /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/mpich/espressomd/highlander.py -- Installing: /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/mpich/espressomd/lbboundaries.py -- Installing: /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/mpich/espressomd/observables.py -- Installing: /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/mpich/espressomd/pair_criteria.py -- Installing: /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/mpich/espressomd/shapes.py -- Installing: /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/mpich/espressomd/virtual_sites.py -- Installing: /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/mpich/espressomd/__cinit__.py -- Installing: /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/mpich/espressomd/__init__.py -- Installing: /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/mpich/espressomd/accumulators.py -- Installing: /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/mpich/espressomd/checkpointing.py -- Installing: /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/mpich/espressomd/cluster_analysis.py -- Installing: /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/mpich/espressomd/comfixed.py -- Installing: /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/mpich/espressomd/constraints.py -- Installing: /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/mpich/espressomd/drude_helpers.py make: Leaving directory '/builddir/build/BUILD/espresso/mpich' + module unload mpi/mpich-x86_64 ++ /usr/share/lmod/lmod/libexec/lmod bash unload mpi/mpich-x86_64 + eval unset '__LMOD_REF_COUNT_LD_LIBRARY_PATH;' unset 'LD_LIBRARY_PATH;' unset '__LMOD_REF_COUNT_LOADEDMODULES;' unset 'LOADEDMODULES;' '__LMOD_REF_COUNT_MANPATH=/usr/share/lmod/lmod/share/man:1;' export '__LMOD_REF_COUNT_MANPATH;' 'MANPATH=/usr/share/lmod/lmod/share/man;' export 'MANPATH;' 'MODULEPATH=/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core;' export 'MODULEPATH;' unset 'MPI_BIN;' unset 'MPI_COMPILER;' unset 'MPI_FORTRAN_MOD_DIR;' unset 'MPI_HOME;' unset 'MPI_INCLUDE;' unset 'MPI_LIB;' unset 'MPI_MAN;' unset 'MPI_PYTHON2_SITEARCH;' unset 'MPI_PYTHON3_SITEARCH;' unset 'MPI_PYTHON_SITEARCH;' unset 'MPI_SUFFIX;' unset 'MPI_SYSCONFIG;' '__LMOD_REF_COUNT_PATH=/usr/bin:1\;/bin:1\;/usr/sbin:1\;/sbin:1\;/usr/local/sbin:1;' export '__LMOD_REF_COUNT_PATH;' 'PATH=/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin;' export 'PATH;' '__LMOD_REF_COUNT_PKG_CONFIG_PATH=/usr/lib64/pkgconfig:1\;/usr/share/pkgconfig:1;' export '__LMOD_REF_COUNT_PKG_CONFIG_PATH;' 'PKG_CONFIG_PATH=:/usr/lib64/pkgconfig:/usr/share/pkgconfig;' export 'PKG_CONFIG_PATH;' unset '__LMOD_REF_COUNT__LMFILES_;' unset '_LMFILES_;' '_ModuleTable001_=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;' export '_ModuleTable001_;' '_ModuleTable002_=cmUvbG1vZC9sbW9kL21vZHVsZWZpbGVzL0NvcmUiLH0=;' export '_ModuleTable002_;' '_ModuleTable_Sz_=2;' export '_ModuleTable_Sz_;' ++ unset __LMOD_REF_COUNT_LD_LIBRARY_PATH ++ unset LD_LIBRARY_PATH ++ unset __LMOD_REF_COUNT_LOADEDMODULES ++ unset LOADEDMODULES ++ __LMOD_REF_COUNT_MANPATH=/usr/share/lmod/lmod/share/man:1 ++ export __LMOD_REF_COUNT_MANPATH ++ MANPATH=/usr/share/lmod/lmod/share/man ++ export MANPATH ++ MODULEPATH=/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core ++ export MODULEPATH ++ unset MPI_BIN ++ unset MPI_COMPILER ++ unset MPI_FORTRAN_MOD_DIR ++ unset MPI_HOME ++ unset MPI_INCLUDE ++ unset MPI_LIB ++ unset MPI_MAN ++ unset MPI_PYTHON2_SITEARCH ++ unset MPI_PYTHON3_SITEARCH ++ unset MPI_PYTHON_SITEARCH ++ unset MPI_SUFFIX ++ unset MPI_SYSCONFIG ++ __LMOD_REF_COUNT_PATH='/usr/bin:1;/bin:1;/usr/sbin:1;/sbin:1;/usr/local/sbin:1' ++ export __LMOD_REF_COUNT_PATH ++ PATH=/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin ++ export PATH ++ __LMOD_REF_COUNT_PKG_CONFIG_PATH='/usr/lib64/pkgconfig:1;/usr/share/pkgconfig:1' ++ export __LMOD_REF_COUNT_PKG_CONFIG_PATH ++ PKG_CONFIG_PATH=:/usr/lib64/pkgconfig:/usr/share/pkgconfig ++ export PKG_CONFIG_PATH ++ unset __LMOD_REF_COUNT__LMFILES_ ++ unset _LMFILES_ ++ _ModuleTable001_=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 ++ export _ModuleTable001_ ++ _ModuleTable002_=cmUvbG1vZC9sbW9kL21vZHVsZWZpbGVzL0NvcmUiLH0= ++ export _ModuleTable002_ ++ _ModuleTable_Sz_=2 ++ export _ModuleTable_Sz_ ++ : -s sh + eval + for mpi in mpich openmpi + module load mpi/openmpi-x86_64 ++ /usr/share/lmod/lmod/libexec/lmod bash load mpi/openmpi-x86_64 + eval '__LMOD_REF_COUNT_LD_LIBRARY_PATH=/usr/lib64/openmpi/lib:1;' export '__LMOD_REF_COUNT_LD_LIBRARY_PATH;' 'LD_LIBRARY_PATH=/usr/lib64/openmpi/lib;' export 'LD_LIBRARY_PATH;' '__LMOD_REF_COUNT_LOADEDMODULES=mpi/openmpi-x86_64:1;' export '__LMOD_REF_COUNT_LOADEDMODULES;' 'LOADEDMODULES=mpi/openmpi-x86_64;' export 'LOADEDMODULES;' '__LMOD_REF_COUNT_MANPATH=/usr/share/man/openmpi-x86_64:1\;/usr/share/lmod/lmod/share/man:1;' export '__LMOD_REF_COUNT_MANPATH;' 'MANPATH=:/usr/share/man/openmpi-x86_64:/usr/share/lmod/lmod/share/man;' export 'MANPATH;' 'MODULEPATH=/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core;' export 'MODULEPATH;' 'MPI_BIN=/usr/lib64/openmpi/bin;' export 'MPI_BIN;' 'MPI_COMPILER=openmpi-x86_64;' export 'MPI_COMPILER;' 'MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/openmpi;' export 'MPI_FORTRAN_MOD_DIR;' 'MPI_HOME=/usr/lib64/openmpi;' export 'MPI_HOME;' 'MPI_INCLUDE=/usr/include/openmpi-x86_64;' export 'MPI_INCLUDE;' 'MPI_LIB=/usr/lib64/openmpi/lib;' export 'MPI_LIB;' 'MPI_MAN=/usr/share/man/openmpi-x86_64;' export 'MPI_MAN;' 'MPI_PYTHON3_SITEARCH=/usr/lib64/python3.9/site-packages/openmpi;' export 'MPI_PYTHON3_SITEARCH;' 'MPI_SUFFIX=_openmpi;' export 'MPI_SUFFIX;' 'MPI_SYSCONFIG=/etc/openmpi-x86_64;' export 'MPI_SYSCONFIG;' '__LMOD_REF_COUNT_PATH=/usr/lib64/openmpi/bin:1\;/usr/bin:1\;/bin:1\;/usr/sbin:1\;/sbin:1\;/usr/local/sbin:1;' export '__LMOD_REF_COUNT_PATH;' 'PATH=/usr/lib64/openmpi/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin;' export 'PATH;' '__LMOD_REF_COUNT_PKG_CONFIG_PATH=/usr/lib64/openmpi/lib/pkgconfig:1\;/usr/lib64/pkgconfig:1\;/usr/share/pkgconfig:1;' export '__LMOD_REF_COUNT_PKG_CONFIG_PATH;' 'PKG_CONFIG_PATH=/usr/lib64/openmpi/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig;' export 'PKG_CONFIG_PATH;' '__LMOD_REF_COUNT__LMFILES_=/usr/share/modulefiles/mpi/openmpi-x86_64:1;' export '__LMOD_REF_COUNT__LMFILES_;' '_LMFILES_=/usr/share/modulefiles/mpi/openmpi-x86_64;' export '_LMFILES_;' '_ModuleTable001_=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;' export '_ModuleTable001_;' '_ModuleTable002_=ZS9tb2R1bGVmaWxlcy9Db3JlIiwiL3Vzci9zaGFyZS9sbW9kL2xtb2QvbW9kdWxlZmlsZXMvQ29yZSIsfSxbInN5c3RlbUJhc2VNUEFUSCJdPSIvZXRjL21vZHVsZWZpbGVzOi91c3Ivc2hhcmUvbW9kdWxlZmlsZXM6L3Vzci9zaGFyZS9tb2R1bGVmaWxlcy9MaW51eDovdXNyL3NoYXJlL21vZHVsZWZpbGVzL0NvcmU6L3Vzci9zaGFyZS9sbW9kL2xtb2QvbW9kdWxlZmlsZXMvQ29yZSIsfQ==;' export '_ModuleTable002_;' '_ModuleTable_Sz_=2;' export '_ModuleTable_Sz_;' ++ __LMOD_REF_COUNT_LD_LIBRARY_PATH=/usr/lib64/openmpi/lib:1 ++ export __LMOD_REF_COUNT_LD_LIBRARY_PATH ++ LD_LIBRARY_PATH=/usr/lib64/openmpi/lib ++ export LD_LIBRARY_PATH ++ __LMOD_REF_COUNT_LOADEDMODULES=mpi/openmpi-x86_64:1 ++ export __LMOD_REF_COUNT_LOADEDMODULES ++ LOADEDMODULES=mpi/openmpi-x86_64 ++ export LOADEDMODULES ++ __LMOD_REF_COUNT_MANPATH='/usr/share/man/openmpi-x86_64:1;/usr/share/lmod/lmod/share/man:1' ++ export __LMOD_REF_COUNT_MANPATH ++ MANPATH=:/usr/share/man/openmpi-x86_64:/usr/share/lmod/lmod/share/man ++ export MANPATH ++ MODULEPATH=/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core ++ export MODULEPATH ++ MPI_BIN=/usr/lib64/openmpi/bin ++ export MPI_BIN ++ MPI_COMPILER=openmpi-x86_64 ++ export MPI_COMPILER ++ MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/openmpi ++ export MPI_FORTRAN_MOD_DIR ++ MPI_HOME=/usr/lib64/openmpi ++ export MPI_HOME ++ MPI_INCLUDE=/usr/include/openmpi-x86_64 ++ export MPI_INCLUDE ++ MPI_LIB=/usr/lib64/openmpi/lib ++ export MPI_LIB ++ MPI_MAN=/usr/share/man/openmpi-x86_64 ++ export MPI_MAN ++ MPI_PYTHON3_SITEARCH=/usr/lib64/python3.9/site-packages/openmpi ++ export MPI_PYTHON3_SITEARCH ++ MPI_SUFFIX=_openmpi ++ export MPI_SUFFIX ++ MPI_SYSCONFIG=/etc/openmpi-x86_64 ++ export MPI_SYSCONFIG ++ __LMOD_REF_COUNT_PATH='/usr/lib64/openmpi/bin:1;/usr/bin:1;/bin:1;/usr/sbin:1;/sbin:1;/usr/local/sbin:1' ++ export __LMOD_REF_COUNT_PATH ++ PATH=/usr/lib64/openmpi/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin ++ export PATH ++ __LMOD_REF_COUNT_PKG_CONFIG_PATH='/usr/lib64/openmpi/lib/pkgconfig:1;/usr/lib64/pkgconfig:1;/usr/share/pkgconfig:1' ++ export __LMOD_REF_COUNT_PKG_CONFIG_PATH ++ PKG_CONFIG_PATH=/usr/lib64/openmpi/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig ++ export PKG_CONFIG_PATH ++ __LMOD_REF_COUNT__LMFILES_=/usr/share/modulefiles/mpi/openmpi-x86_64:1 ++ export __LMOD_REF_COUNT__LMFILES_ ++ _LMFILES_=/usr/share/modulefiles/mpi/openmpi-x86_64 ++ export _LMFILES_ ++ _ModuleTable001_=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 ++ export _ModuleTable001_ ++ _ModuleTable002_=ZS9tb2R1bGVmaWxlcy9Db3JlIiwiL3Vzci9zaGFyZS9sbW9kL2xtb2QvbW9kdWxlZmlsZXMvQ29yZSIsfSxbInN5c3RlbUJhc2VNUEFUSCJdPSIvZXRjL21vZHVsZWZpbGVzOi91c3Ivc2hhcmUvbW9kdWxlZmlsZXM6L3Vzci9zaGFyZS9tb2R1bGVmaWxlcy9MaW51eDovdXNyL3NoYXJlL21vZHVsZWZpbGVzL0NvcmU6L3Vzci9zaGFyZS9sbW9kL2xtb2QvbW9kdWxlZmlsZXMvQ29yZSIsfQ== ++ export _ModuleTable002_ ++ _ModuleTable_Sz_=2 ++ export _ModuleTable_Sz_ ++ : -s sh + eval + /usr/bin/make install DESTDIR=/builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64 'INSTALL=/usr/bin/install -p' -C openmpi make: Entering directory '/builddir/build/BUILD/espresso/openmpi' /usr/bin/cmake -S/builddir/build/BUILD/espresso -B/builddir/build/BUILD/espresso/openmpi --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/espresso/openmpi/CMakeFiles /builddir/build/BUILD/espresso/openmpi/CMakeFiles/progress.marks /usr/bin/make -f CMakeFiles/Makefile2 all make[1]: Entering directory '/builddir/build/BUILD/espresso/openmpi' /usr/bin/make -f src/pdbparser/CMakeFiles/pdbparser.dir/build.make src/pdbparser/CMakeFiles/pdbparser.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' cd /builddir/build/BUILD/espresso/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/pdbparser /builddir/build/BUILD/espresso/openmpi /builddir/build/BUILD/espresso/openmpi/src/pdbparser /builddir/build/BUILD/espresso/openmpi/src/pdbparser/CMakeFiles/pdbparser.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' /usr/bin/make -f src/pdbparser/CMakeFiles/pdbparser.dir/build.make src/pdbparser/CMakeFiles/pdbparser.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' make[2]: Nothing to be done for 'src/pdbparser/CMakeFiles/pdbparser.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' [ 1%] Built target pdbparser /usr/bin/make -f src/config/CMakeFiles/generate_config_features.dir/build.make src/config/CMakeFiles/generate_config_features.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' cd /builddir/build/BUILD/espresso/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/config /builddir/build/BUILD/espresso/openmpi /builddir/build/BUILD/espresso/openmpi/src/config /builddir/build/BUILD/espresso/openmpi/src/config/CMakeFiles/generate_config_features.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' /usr/bin/make -f src/config/CMakeFiles/generate_config_features.dir/build.make src/config/CMakeFiles/generate_config_features.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' make[2]: Nothing to be done for 'src/config/CMakeFiles/generate_config_features.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' [ 1%] Built target generate_config_features /usr/bin/make -f CMakeFiles/myconfig.dir/build.make CMakeFiles/myconfig.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' cd /builddir/build/BUILD/espresso/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/openmpi /builddir/build/BUILD/espresso/openmpi /builddir/build/BUILD/espresso/openmpi/CMakeFiles/myconfig.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' /usr/bin/make -f CMakeFiles/myconfig.dir/build.make CMakeFiles/myconfig.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' make[2]: Nothing to be done for 'CMakeFiles/myconfig.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' [ 1%] Built target myconfig /usr/bin/make -f src/config/CMakeFiles/version.dir/build.make src/config/CMakeFiles/version.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' cd /builddir/build/BUILD/espresso/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/config /builddir/build/BUILD/espresso/openmpi /builddir/build/BUILD/espresso/openmpi/src/config /builddir/build/BUILD/espresso/openmpi/src/config/CMakeFiles/version.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' /usr/bin/make -f src/config/CMakeFiles/version.dir/build.make src/config/CMakeFiles/version.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' cd /builddir/build/BUILD/espresso/openmpi/src/config && /usr/bin/cmake -DPROJECT_SOURCE_DIR=/builddir/build/BUILD/espresso -DPROJECT_VERSION=4.1.2 -DGIT_EXECUTABLE=GIT_EXECUTABLE-NOTFOUND -P /builddir/build/BUILD/espresso/cmake/version.cmake make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' [ 1%] Built target version /usr/bin/make -f src/config/CMakeFiles/check_myconfig.dir/build.make src/config/CMakeFiles/check_myconfig.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' cd /builddir/build/BUILD/espresso/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/config /builddir/build/BUILD/espresso/openmpi /builddir/build/BUILD/espresso/openmpi/src/config /builddir/build/BUILD/espresso/openmpi/src/config/CMakeFiles/check_myconfig.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' /usr/bin/make -f src/config/CMakeFiles/check_myconfig.dir/build.make src/config/CMakeFiles/check_myconfig.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' cd /builddir/build/BUILD/espresso/openmpi/src/config && /usr/bin/python3 /builddir/build/BUILD/espresso/src/config/check_myconfig.py /usr/bin/g++ /builddir/build/BUILD/espresso/src/config/features.def /builddir/build/BUILD/espresso/openmpi/src/config/myconfig-final.hpp cmake_config.hpp make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' [ 1%] Built target check_myconfig /usr/bin/make -f src/config/CMakeFiles/EspressoConfig.dir/build.make src/config/CMakeFiles/EspressoConfig.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' cd /builddir/build/BUILD/espresso/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/config /builddir/build/BUILD/espresso/openmpi /builddir/build/BUILD/espresso/openmpi/src/config /builddir/build/BUILD/espresso/openmpi/src/config/CMakeFiles/EspressoConfig.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' /usr/bin/make -f src/config/CMakeFiles/EspressoConfig.dir/build.make src/config/CMakeFiles/EspressoConfig.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' make[2]: Nothing to be done for 'src/config/CMakeFiles/EspressoConfig.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' [ 1%] Built target EspressoConfig /usr/bin/make -f src/core/CMakeFiles/EspressoCore.dir/build.make src/core/CMakeFiles/EspressoCore.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' cd /builddir/build/BUILD/espresso/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/core /builddir/build/BUILD/espresso/openmpi /builddir/build/BUILD/espresso/openmpi/src/core /builddir/build/BUILD/espresso/openmpi/src/core/CMakeFiles/EspressoCore.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' /usr/bin/make -f src/core/CMakeFiles/EspressoCore.dir/build.make src/core/CMakeFiles/EspressoCore.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' make[2]: Nothing to be done for 'src/core/CMakeFiles/EspressoCore.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' [ 45%] Built target EspressoCore /usr/bin/make -f src/core/io/writer/CMakeFiles/H5mdCore.dir/build.make src/core/io/writer/CMakeFiles/H5mdCore.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' cd /builddir/build/BUILD/espresso/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/core/io/writer /builddir/build/BUILD/espresso/openmpi /builddir/build/BUILD/espresso/openmpi/src/core/io/writer /builddir/build/BUILD/espresso/openmpi/src/core/io/writer/CMakeFiles/H5mdCore.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' /usr/bin/make -f src/core/io/writer/CMakeFiles/H5mdCore.dir/build.make src/core/io/writer/CMakeFiles/H5mdCore.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' make[2]: Nothing to be done for 'src/core/io/writer/CMakeFiles/H5mdCore.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' [ 46%] Built target H5mdCore /usr/bin/make -f src/core/io/reader/CMakeFiles/pdbreader.dir/build.make src/core/io/reader/CMakeFiles/pdbreader.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' cd /builddir/build/BUILD/espresso/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/core/io/reader /builddir/build/BUILD/espresso/openmpi /builddir/build/BUILD/espresso/openmpi/src/core/io/reader /builddir/build/BUILD/espresso/openmpi/src/core/io/reader/CMakeFiles/pdbreader.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' /usr/bin/make -f src/core/io/reader/CMakeFiles/pdbreader.dir/build.make src/core/io/reader/CMakeFiles/pdbreader.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' make[2]: Nothing to be done for 'src/core/io/reader/CMakeFiles/pdbreader.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' [ 46%] Built target pdbreader /usr/bin/make -f src/core/io/mpiio/CMakeFiles/mpiio.dir/build.make src/core/io/mpiio/CMakeFiles/mpiio.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' cd /builddir/build/BUILD/espresso/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/core/io/mpiio /builddir/build/BUILD/espresso/openmpi /builddir/build/BUILD/espresso/openmpi/src/core/io/mpiio /builddir/build/BUILD/espresso/openmpi/src/core/io/mpiio/CMakeFiles/mpiio.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' /usr/bin/make -f src/core/io/mpiio/CMakeFiles/mpiio.dir/build.make src/core/io/mpiio/CMakeFiles/mpiio.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' make[2]: Nothing to be done for 'src/core/io/mpiio/CMakeFiles/mpiio.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' [ 46%] Built target mpiio /usr/bin/make -f src/core/shapes/CMakeFiles/Shapes.dir/build.make src/core/shapes/CMakeFiles/Shapes.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' cd /builddir/build/BUILD/espresso/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/core/shapes /builddir/build/BUILD/espresso/openmpi /builddir/build/BUILD/espresso/openmpi/src/core/shapes /builddir/build/BUILD/espresso/openmpi/src/core/shapes/CMakeFiles/Shapes.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' /usr/bin/make -f src/core/shapes/CMakeFiles/Shapes.dir/build.make src/core/shapes/CMakeFiles/Shapes.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' make[2]: Nothing to be done for 'src/core/shapes/CMakeFiles/Shapes.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' [ 51%] Built target Shapes /usr/bin/make -f src/core/cluster_analysis/CMakeFiles/core_cluster_analysis.dir/build.make src/core/cluster_analysis/CMakeFiles/core_cluster_analysis.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' cd /builddir/build/BUILD/espresso/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/core/cluster_analysis /builddir/build/BUILD/espresso/openmpi /builddir/build/BUILD/espresso/openmpi/src/core/cluster_analysis /builddir/build/BUILD/espresso/openmpi/src/core/cluster_analysis/CMakeFiles/core_cluster_analysis.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' /usr/bin/make -f src/core/cluster_analysis/CMakeFiles/core_cluster_analysis.dir/build.make src/core/cluster_analysis/CMakeFiles/core_cluster_analysis.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' make[2]: Nothing to be done for 'src/core/cluster_analysis/CMakeFiles/core_cluster_analysis.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' [ 53%] Built target core_cluster_analysis /usr/bin/make -f src/script_interface/CMakeFiles/EspressoScriptInterface.dir/build.make src/script_interface/CMakeFiles/EspressoScriptInterface.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' cd /builddir/build/BUILD/espresso/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/script_interface /builddir/build/BUILD/espresso/openmpi /builddir/build/BUILD/espresso/openmpi/src/script_interface /builddir/build/BUILD/espresso/openmpi/src/script_interface/CMakeFiles/EspressoScriptInterface.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' /usr/bin/make -f src/script_interface/CMakeFiles/EspressoScriptInterface.dir/build.make src/script_interface/CMakeFiles/EspressoScriptInterface.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' make[2]: Nothing to be done for 'src/script_interface/CMakeFiles/EspressoScriptInterface.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' [ 57%] Built target EspressoScriptInterface /usr/bin/make -f src/python/object_in_fluid/CMakeFiles/object_in_fluid.dir/build.make src/python/object_in_fluid/CMakeFiles/object_in_fluid.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' cd /builddir/build/BUILD/espresso/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/object_in_fluid /builddir/build/BUILD/espresso/openmpi /builddir/build/BUILD/espresso/openmpi/src/python/object_in_fluid /builddir/build/BUILD/espresso/openmpi/src/python/object_in_fluid/CMakeFiles/object_in_fluid.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' /usr/bin/make -f src/python/object_in_fluid/CMakeFiles/object_in_fluid.dir/build.make src/python/object_in_fluid/CMakeFiles/object_in_fluid.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' cd /builddir/build/BUILD/espresso/openmpi/src/python/object_in_fluid && /usr/bin/cmake -E copy /builddir/build/BUILD/espresso/src/python/object_in_fluid/__init__.py /builddir/build/BUILD/espresso/openmpi/src/python/object_in_fluid//__init__.py cd /builddir/build/BUILD/espresso/openmpi/src/python/object_in_fluid && /usr/bin/cmake -E copy /builddir/build/BUILD/espresso/src/python/object_in_fluid/oif_classes.py /builddir/build/BUILD/espresso/openmpi/src/python/object_in_fluid//oif_classes.py cd /builddir/build/BUILD/espresso/openmpi/src/python/object_in_fluid && /usr/bin/cmake -E copy /builddir/build/BUILD/espresso/src/python/object_in_fluid/oif_utils.py /builddir/build/BUILD/espresso/openmpi/src/python/object_in_fluid//oif_utils.py make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' [ 57%] Built target object_in_fluid /usr/bin/make -f src/python/espressomd/CMakeFiles/gen_pxiconfig.dir/build.make src/python/espressomd/CMakeFiles/gen_pxiconfig.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' cd /builddir/build/BUILD/espresso/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/espressomd /builddir/build/BUILD/espresso/openmpi /builddir/build/BUILD/espresso/openmpi/src/python/espressomd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/gen_pxiconfig.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' /usr/bin/make -f src/python/espressomd/CMakeFiles/gen_pxiconfig.dir/build.make src/python/espressomd/CMakeFiles/gen_pxiconfig.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' make[2]: Nothing to be done for 'src/python/espressomd/CMakeFiles/gen_pxiconfig.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' [ 59%] Built target gen_pxiconfig /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_thermostat.dir/build.make src/python/espressomd/CMakeFiles/espressomd_thermostat.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' cd /builddir/build/BUILD/espresso/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/espressomd /builddir/build/BUILD/espresso/openmpi /builddir/build/BUILD/espresso/openmpi/src/python/espressomd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/espressomd_thermostat.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_thermostat.dir/build.make src/python/espressomd/CMakeFiles/espressomd_thermostat.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' make[2]: Nothing to be done for 'src/python/espressomd/CMakeFiles/espressomd_thermostat.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' [ 60%] Built target espressomd_thermostat /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_code_info.dir/build.make src/python/espressomd/CMakeFiles/espressomd_code_info.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' cd /builddir/build/BUILD/espresso/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/espressomd /builddir/build/BUILD/espresso/openmpi /builddir/build/BUILD/espresso/openmpi/src/python/espressomd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/espressomd_code_info.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_code_info.dir/build.make src/python/espressomd/CMakeFiles/espressomd_code_info.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' make[2]: Nothing to be done for 'src/python/espressomd/CMakeFiles/espressomd_code_info.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' [ 62%] Built target espressomd_code_info /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_visualization_opengl.dir/build.make src/python/espressomd/CMakeFiles/espressomd_visualization_opengl.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' cd /builddir/build/BUILD/espresso/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/espressomd /builddir/build/BUILD/espresso/openmpi /builddir/build/BUILD/espresso/openmpi/src/python/espressomd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/espressomd_visualization_opengl.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_visualization_opengl.dir/build.make src/python/espressomd/CMakeFiles/espressomd_visualization_opengl.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' make[2]: Nothing to be done for 'src/python/espressomd/CMakeFiles/espressomd_visualization_opengl.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' [ 64%] Built target espressomd_visualization_opengl /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_visualization_mayavi.dir/build.make src/python/espressomd/CMakeFiles/espressomd_visualization_mayavi.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' cd /builddir/build/BUILD/espresso/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/espressomd /builddir/build/BUILD/espresso/openmpi /builddir/build/BUILD/espresso/openmpi/src/python/espressomd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/espressomd_visualization_mayavi.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_visualization_mayavi.dir/build.make src/python/espressomd/CMakeFiles/espressomd_visualization_mayavi.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' make[2]: Nothing to be done for 'src/python/espressomd/CMakeFiles/espressomd_visualization_mayavi.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' [ 65%] Built target espressomd_visualization_mayavi /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_visualization.dir/build.make src/python/espressomd/CMakeFiles/espressomd_visualization.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' cd /builddir/build/BUILD/espresso/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/espressomd /builddir/build/BUILD/espresso/openmpi /builddir/build/BUILD/espresso/openmpi/src/python/espressomd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/espressomd_visualization.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_visualization.dir/build.make src/python/espressomd/CMakeFiles/espressomd_visualization.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' make[2]: Nothing to be done for 'src/python/espressomd/CMakeFiles/espressomd_visualization.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' [ 65%] Built target espressomd_visualization /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_version.dir/build.make src/python/espressomd/CMakeFiles/espressomd_version.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' cd /builddir/build/BUILD/espresso/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/espressomd /builddir/build/BUILD/espresso/openmpi /builddir/build/BUILD/espresso/openmpi/src/python/espressomd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/espressomd_version.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_version.dir/build.make src/python/espressomd/CMakeFiles/espressomd_version.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' make[2]: Nothing to be done for 'src/python/espressomd/CMakeFiles/espressomd_version.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' [ 67%] Built target espressomd_version /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_system.dir/build.make src/python/espressomd/CMakeFiles/espressomd_system.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' cd /builddir/build/BUILD/espresso/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/espressomd /builddir/build/BUILD/espresso/openmpi /builddir/build/BUILD/espresso/openmpi/src/python/espressomd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/espressomd_system.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_system.dir/build.make src/python/espressomd/CMakeFiles/espressomd_system.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' make[2]: Nothing to be done for 'src/python/espressomd/CMakeFiles/espressomd_system.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' [ 68%] Built target espressomd_system /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_electrostatic_extensions.dir/build.make src/python/espressomd/CMakeFiles/espressomd_electrostatic_extensions.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' cd /builddir/build/BUILD/espresso/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/espressomd /builddir/build/BUILD/espresso/openmpi /builddir/build/BUILD/espresso/openmpi/src/python/espressomd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/espressomd_electrostatic_extensions.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_electrostatic_extensions.dir/build.make src/python/espressomd/CMakeFiles/espressomd_electrostatic_extensions.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' make[2]: Nothing to be done for 'src/python/espressomd/CMakeFiles/espressomd_electrostatic_extensions.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' [ 70%] Built target espressomd_electrostatic_extensions /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_utils.dir/build.make src/python/espressomd/CMakeFiles/espressomd_utils.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' cd /builddir/build/BUILD/espresso/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/espressomd /builddir/build/BUILD/espresso/openmpi /builddir/build/BUILD/espresso/openmpi/src/python/espressomd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/espressomd_utils.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_utils.dir/build.make src/python/espressomd/CMakeFiles/espressomd_utils.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' make[2]: Nothing to be done for 'src/python/espressomd/CMakeFiles/espressomd_utils.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' [ 71%] Built target espressomd_utils /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_electrokinetics.dir/build.make src/python/espressomd/CMakeFiles/espressomd_electrokinetics.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' cd /builddir/build/BUILD/espresso/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/espressomd /builddir/build/BUILD/espresso/openmpi /builddir/build/BUILD/espresso/openmpi/src/python/espressomd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/espressomd_electrokinetics.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_electrokinetics.dir/build.make src/python/espressomd/CMakeFiles/espressomd_electrokinetics.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' make[2]: Nothing to be done for 'src/python/espressomd/CMakeFiles/espressomd_electrokinetics.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' [ 73%] Built target espressomd_electrokinetics /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_cellsystem.dir/build.make src/python/espressomd/CMakeFiles/espressomd_cellsystem.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' cd /builddir/build/BUILD/espresso/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/espressomd /builddir/build/BUILD/espresso/openmpi /builddir/build/BUILD/espresso/openmpi/src/python/espressomd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/espressomd_cellsystem.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_cellsystem.dir/build.make src/python/espressomd/CMakeFiles/espressomd_cellsystem.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' make[2]: Nothing to be done for 'src/python/espressomd/CMakeFiles/espressomd_cellsystem.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' [ 75%] Built target espressomd_cellsystem /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_electrostatics.dir/build.make src/python/espressomd/CMakeFiles/espressomd_electrostatics.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' cd /builddir/build/BUILD/espresso/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/espressomd /builddir/build/BUILD/espresso/openmpi /builddir/build/BUILD/espresso/openmpi/src/python/espressomd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/espressomd_electrostatics.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_electrostatics.dir/build.make src/python/espressomd/CMakeFiles/espressomd_electrostatics.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' make[2]: Nothing to be done for 'src/python/espressomd/CMakeFiles/espressomd_electrostatics.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' [ 76%] Built target espressomd_electrostatics /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_diamond.dir/build.make src/python/espressomd/CMakeFiles/espressomd_diamond.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' cd /builddir/build/BUILD/espresso/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/espressomd /builddir/build/BUILD/espresso/openmpi /builddir/build/BUILD/espresso/openmpi/src/python/espressomd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/espressomd_diamond.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_diamond.dir/build.make src/python/espressomd/CMakeFiles/espressomd_diamond.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' make[2]: Nothing to be done for 'src/python/espressomd/CMakeFiles/espressomd_diamond.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' [ 76%] Built target espressomd_diamond /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_cuda_init.dir/build.make src/python/espressomd/CMakeFiles/espressomd_cuda_init.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' cd /builddir/build/BUILD/espresso/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/espressomd /builddir/build/BUILD/espresso/openmpi /builddir/build/BUILD/espresso/openmpi/src/python/espressomd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/espressomd_cuda_init.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_cuda_init.dir/build.make src/python/espressomd/CMakeFiles/espressomd_cuda_init.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' make[2]: Nothing to be done for 'src/python/espressomd/CMakeFiles/espressomd_cuda_init.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' [ 78%] Built target espressomd_cuda_init /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_integrate.dir/build.make src/python/espressomd/CMakeFiles/espressomd_integrate.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' cd /builddir/build/BUILD/espresso/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/espressomd /builddir/build/BUILD/espresso/openmpi /builddir/build/BUILD/espresso/openmpi/src/python/espressomd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/espressomd_integrate.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_integrate.dir/build.make src/python/espressomd/CMakeFiles/espressomd_integrate.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' make[2]: Nothing to be done for 'src/python/espressomd/CMakeFiles/espressomd_integrate.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' [ 79%] Built target espressomd_integrate /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_actors.dir/build.make src/python/espressomd/CMakeFiles/espressomd_actors.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' cd /builddir/build/BUILD/espresso/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/espressomd /builddir/build/BUILD/espresso/openmpi /builddir/build/BUILD/espresso/openmpi/src/python/espressomd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/espressomd_actors.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_actors.dir/build.make src/python/espressomd/CMakeFiles/espressomd_actors.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' make[2]: Nothing to be done for 'src/python/espressomd/CMakeFiles/espressomd_actors.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' [ 81%] Built target espressomd_actors /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd__init.dir/build.make src/python/espressomd/CMakeFiles/espressomd__init.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' cd /builddir/build/BUILD/espresso/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/espressomd /builddir/build/BUILD/espresso/openmpi /builddir/build/BUILD/espresso/openmpi/src/python/espressomd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/espressomd__init.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd__init.dir/build.make src/python/espressomd/CMakeFiles/espressomd__init.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' make[2]: Nothing to be done for 'src/python/espressomd/CMakeFiles/espressomd__init.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' [ 81%] Built target espressomd__init /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_polymer.dir/build.make src/python/espressomd/CMakeFiles/espressomd_polymer.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' cd /builddir/build/BUILD/espresso/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/espressomd /builddir/build/BUILD/espresso/openmpi /builddir/build/BUILD/espresso/openmpi/src/python/espressomd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/espressomd_polymer.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_polymer.dir/build.make src/python/espressomd/CMakeFiles/espressomd_polymer.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' make[2]: Nothing to be done for 'src/python/espressomd/CMakeFiles/espressomd_polymer.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' [ 82%] Built target espressomd_polymer /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_galilei.dir/build.make src/python/espressomd/CMakeFiles/espressomd_galilei.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' cd /builddir/build/BUILD/espresso/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/espressomd /builddir/build/BUILD/espresso/openmpi /builddir/build/BUILD/espresso/openmpi/src/python/espressomd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/espressomd_galilei.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_galilei.dir/build.make src/python/espressomd/CMakeFiles/espressomd_galilei.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' make[2]: Nothing to be done for 'src/python/espressomd/CMakeFiles/espressomd_galilei.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' [ 84%] Built target espressomd_galilei /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_reaction_ensemble.dir/build.make src/python/espressomd/CMakeFiles/espressomd_reaction_ensemble.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' cd /builddir/build/BUILD/espresso/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/espressomd /builddir/build/BUILD/espresso/openmpi /builddir/build/BUILD/espresso/openmpi/src/python/espressomd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/espressomd_reaction_ensemble.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_reaction_ensemble.dir/build.make src/python/espressomd/CMakeFiles/espressomd_reaction_ensemble.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' make[2]: Nothing to be done for 'src/python/espressomd/CMakeFiles/espressomd_reaction_ensemble.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' [ 85%] Built target espressomd_reaction_ensemble /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_analyze.dir/build.make src/python/espressomd/CMakeFiles/espressomd_analyze.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' cd /builddir/build/BUILD/espresso/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/espressomd /builddir/build/BUILD/espresso/openmpi /builddir/build/BUILD/espresso/openmpi/src/python/espressomd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/espressomd_analyze.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_analyze.dir/build.make src/python/espressomd/CMakeFiles/espressomd_analyze.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' make[2]: Nothing to be done for 'src/python/espressomd/CMakeFiles/espressomd_analyze.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' [ 87%] Built target espressomd_analyze /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_particle_data.dir/build.make src/python/espressomd/CMakeFiles/espressomd_particle_data.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' cd /builddir/build/BUILD/espresso/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/espressomd /builddir/build/BUILD/espresso/openmpi /builddir/build/BUILD/espresso/openmpi/src/python/espressomd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/espressomd_particle_data.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_particle_data.dir/build.make src/python/espressomd/CMakeFiles/espressomd_particle_data.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' make[2]: Nothing to be done for 'src/python/espressomd/CMakeFiles/espressomd_particle_data.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' [ 89%] Built target espressomd_particle_data /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_collision_detection.dir/build.make src/python/espressomd/CMakeFiles/espressomd_collision_detection.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' cd /builddir/build/BUILD/espresso/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/espressomd /builddir/build/BUILD/espresso/openmpi /builddir/build/BUILD/espresso/openmpi/src/python/espressomd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/espressomd_collision_detection.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_collision_detection.dir/build.make src/python/espressomd/CMakeFiles/espressomd_collision_detection.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' make[2]: Nothing to be done for 'src/python/espressomd/CMakeFiles/espressomd_collision_detection.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' [ 90%] Built target espressomd_collision_detection /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_script_interface.dir/build.make src/python/espressomd/CMakeFiles/espressomd_script_interface.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' cd /builddir/build/BUILD/espresso/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/espressomd /builddir/build/BUILD/espresso/openmpi /builddir/build/BUILD/espresso/openmpi/src/python/espressomd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/espressomd_script_interface.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_script_interface.dir/build.make src/python/espressomd/CMakeFiles/espressomd_script_interface.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' make[2]: Nothing to be done for 'src/python/espressomd/CMakeFiles/espressomd_script_interface.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' [ 92%] Built target espressomd_script_interface /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_globals.dir/build.make src/python/espressomd/CMakeFiles/espressomd_globals.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' cd /builddir/build/BUILD/espresso/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/espressomd /builddir/build/BUILD/espresso/openmpi /builddir/build/BUILD/espresso/openmpi/src/python/espressomd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/espressomd_globals.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_globals.dir/build.make src/python/espressomd/CMakeFiles/espressomd_globals.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' make[2]: Nothing to be done for 'src/python/espressomd/CMakeFiles/espressomd_globals.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' [ 92%] Built target espressomd_globals /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_magnetostatic_extensions.dir/build.make src/python/espressomd/CMakeFiles/espressomd_magnetostatic_extensions.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' cd /builddir/build/BUILD/espresso/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/espressomd /builddir/build/BUILD/espresso/openmpi /builddir/build/BUILD/espresso/openmpi/src/python/espressomd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/espressomd_magnetostatic_extensions.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_magnetostatic_extensions.dir/build.make src/python/espressomd/CMakeFiles/espressomd_magnetostatic_extensions.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' make[2]: Nothing to be done for 'src/python/espressomd/CMakeFiles/espressomd_magnetostatic_extensions.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' [ 93%] Built target espressomd_magnetostatic_extensions /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_interactions.dir/build.make src/python/espressomd/CMakeFiles/espressomd_interactions.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' cd /builddir/build/BUILD/espresso/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/espressomd /builddir/build/BUILD/espresso/openmpi /builddir/build/BUILD/espresso/openmpi/src/python/espressomd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/espressomd_interactions.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_interactions.dir/build.make src/python/espressomd/CMakeFiles/espressomd_interactions.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' make[2]: Nothing to be done for 'src/python/espressomd/CMakeFiles/espressomd_interactions.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' [ 95%] Built target espressomd_interactions /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_lb.dir/build.make src/python/espressomd/CMakeFiles/espressomd_lb.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' cd /builddir/build/BUILD/espresso/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/espressomd /builddir/build/BUILD/espresso/openmpi /builddir/build/BUILD/espresso/openmpi/src/python/espressomd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/espressomd_lb.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_lb.dir/build.make src/python/espressomd/CMakeFiles/espressomd_lb.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' make[2]: Nothing to be done for 'src/python/espressomd/CMakeFiles/espressomd_lb.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' [ 96%] Built target espressomd_lb /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_minimize_energy.dir/build.make src/python/espressomd/CMakeFiles/espressomd_minimize_energy.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' cd /builddir/build/BUILD/espresso/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/espressomd /builddir/build/BUILD/espresso/openmpi /builddir/build/BUILD/espresso/openmpi/src/python/espressomd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/espressomd_minimize_energy.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_minimize_energy.dir/build.make src/python/espressomd/CMakeFiles/espressomd_minimize_energy.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' make[2]: Nothing to be done for 'src/python/espressomd/CMakeFiles/espressomd_minimize_energy.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' [ 96%] Built target espressomd_minimize_energy /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_magnetostatics.dir/build.make src/python/espressomd/CMakeFiles/espressomd_magnetostatics.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' cd /builddir/build/BUILD/espresso/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/espressomd /builddir/build/BUILD/espresso/openmpi /builddir/build/BUILD/espresso/openmpi/src/python/espressomd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/espressomd_magnetostatics.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_magnetostatics.dir/build.make src/python/espressomd/CMakeFiles/espressomd_magnetostatics.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' make[2]: Nothing to be done for 'src/python/espressomd/CMakeFiles/espressomd_magnetostatics.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' [ 98%] Built target espressomd_magnetostatics /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_profiler.dir/build.make src/python/espressomd/CMakeFiles/espressomd_profiler.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' cd /builddir/build/BUILD/espresso/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/espressomd /builddir/build/BUILD/espresso/openmpi /builddir/build/BUILD/espresso/openmpi/src/python/espressomd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/espressomd_profiler.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_profiler.dir/build.make src/python/espressomd/CMakeFiles/espressomd_profiler.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' make[2]: Nothing to be done for 'src/python/espressomd/CMakeFiles/espressomd_profiler.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' [100%] Built target espressomd_profiler /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_scafacos.dir/build.make src/python/espressomd/CMakeFiles/espressomd_scafacos.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' cd /builddir/build/BUILD/espresso/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/espressomd /builddir/build/BUILD/espresso/openmpi /builddir/build/BUILD/espresso/openmpi/src/python/espressomd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/espressomd_scafacos.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_scafacos.dir/build.make src/python/espressomd/CMakeFiles/espressomd_scafacos.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' make[2]: Nothing to be done for 'src/python/espressomd/CMakeFiles/espressomd_scafacos.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' [100%] Built target espressomd_scafacos /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd.dir/build.make src/python/espressomd/CMakeFiles/espressomd.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' cd /builddir/build/BUILD/espresso/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/espressomd /builddir/build/BUILD/espresso/openmpi /builddir/build/BUILD/espresso/openmpi/src/python/espressomd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd/CMakeFiles/espressomd.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd.dir/build.make src/python/espressomd/CMakeFiles/espressomd.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' cd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd && /usr/bin/cmake -E copy /builddir/build/BUILD/espresso/src/python/espressomd/__cinit__.py /builddir/build/BUILD/espresso/openmpi/src/python/espressomd//__cinit__.py cd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd && /usr/bin/cmake -E copy /builddir/build/BUILD/espresso/src/python/espressomd/__init__.py /builddir/build/BUILD/espresso/openmpi/src/python/espressomd//__init__.py cd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd && /usr/bin/cmake -E copy /builddir/build/BUILD/espresso/src/python/espressomd/accumulators.py /builddir/build/BUILD/espresso/openmpi/src/python/espressomd//accumulators.py cd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd && /usr/bin/cmake -E copy /builddir/build/BUILD/espresso/src/python/espressomd/checkpointing.py /builddir/build/BUILD/espresso/openmpi/src/python/espressomd//checkpointing.py cd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd && /usr/bin/cmake -E copy /builddir/build/BUILD/espresso/src/python/espressomd/cluster_analysis.py /builddir/build/BUILD/espresso/openmpi/src/python/espressomd//cluster_analysis.py cd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd && /usr/bin/cmake -E copy /builddir/build/BUILD/espresso/src/python/espressomd/comfixed.py /builddir/build/BUILD/espresso/openmpi/src/python/espressomd//comfixed.py cd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd && /usr/bin/cmake -E copy /builddir/build/BUILD/espresso/src/python/espressomd/constraints.py /builddir/build/BUILD/espresso/openmpi/src/python/espressomd//constraints.py cd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd && /usr/bin/cmake -E copy /builddir/build/BUILD/espresso/src/python/espressomd/drude_helpers.py /builddir/build/BUILD/espresso/openmpi/src/python/espressomd//drude_helpers.py cd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd && /usr/bin/cmake -E copy /builddir/build/BUILD/espresso/src/python/espressomd/ekboundaries.py /builddir/build/BUILD/espresso/openmpi/src/python/espressomd//ekboundaries.py cd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd && /usr/bin/cmake -E copy /builddir/build/BUILD/espresso/src/python/espressomd/gen_code_info.py /builddir/build/BUILD/espresso/openmpi/src/python/espressomd//gen_code_info.py cd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd && /usr/bin/cmake -E copy /builddir/build/BUILD/espresso/src/python/espressomd/gen_pxiconfig.py /builddir/build/BUILD/espresso/openmpi/src/python/espressomd//gen_pxiconfig.py cd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd && /usr/bin/cmake -E copy /builddir/build/BUILD/espresso/src/python/espressomd/highlander.py /builddir/build/BUILD/espresso/openmpi/src/python/espressomd//highlander.py cd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd && /usr/bin/cmake -E copy /builddir/build/BUILD/espresso/src/python/espressomd/lbboundaries.py /builddir/build/BUILD/espresso/openmpi/src/python/espressomd//lbboundaries.py cd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd && /usr/bin/cmake -E copy /builddir/build/BUILD/espresso/src/python/espressomd/observables.py /builddir/build/BUILD/espresso/openmpi/src/python/espressomd//observables.py cd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd && /usr/bin/cmake -E copy /builddir/build/BUILD/espresso/src/python/espressomd/pair_criteria.py /builddir/build/BUILD/espresso/openmpi/src/python/espressomd//pair_criteria.py cd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd && /usr/bin/cmake -E copy /builddir/build/BUILD/espresso/src/python/espressomd/shapes.py /builddir/build/BUILD/espresso/openmpi/src/python/espressomd//shapes.py cd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd && /usr/bin/cmake -E copy /builddir/build/BUILD/espresso/src/python/espressomd/virtual_sites.py /builddir/build/BUILD/espresso/openmpi/src/python/espressomd//virtual_sites.py cd /builddir/build/BUILD/espresso/openmpi/src/python/espressomd && /usr/bin/cmake -E copy /builddir/build/BUILD/espresso/src/python/espressomd/io/__init__.py /builddir/build/BUILD/espresso/openmpi/src/python/espressomd/io/__init__.py make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' [100%] Built target espressomd /usr/bin/make -f src/python/CMakeFiles/pypresso.dir/build.make src/python/CMakeFiles/pypresso.dir/depend make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' cd /builddir/build/BUILD/espresso/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python /builddir/build/BUILD/espresso/openmpi /builddir/build/BUILD/espresso/openmpi/src/python /builddir/build/BUILD/espresso/openmpi/src/python/CMakeFiles/pypresso.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' /usr/bin/make -f src/python/CMakeFiles/pypresso.dir/build.make src/python/CMakeFiles/pypresso.dir/build make[2]: Entering directory '/builddir/build/BUILD/espresso/openmpi' make[2]: Nothing to be done for 'src/python/CMakeFiles/pypresso.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' [100%] Built target pypresso make[1]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/espresso/openmpi/CMakeFiles 0 /usr/bin/make -f CMakeFiles/Makefile2 preinstall make[1]: Entering directory '/builddir/build/BUILD/espresso/openmpi' make[1]: Nothing to be done for 'preinstall'. make[1]: Leaving directory '/builddir/build/BUILD/espresso/openmpi' Install the project... /usr/bin/cmake -P cmake_install.cmake -- Install configuration: "Release" -- Installing: /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/openmpi/espressomd/EspressoCore.so -- Installing: /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/openmpi/espressomd/H5mdCore.so -- Installing: /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/openmpi/espressomd/pdbreader.so -- Installing: /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/openmpi/espressomd/mpiio.so -- Installing: /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/openmpi/espressomd/Shapes.so -- Installing: /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/openmpi/espressomd/core_cluster_analysis.so -- Installing: /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/openmpi/espressomd/EspressoConfig.so -- Installing: /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/openmpi/espressomd/pdbparser.so -- Installing: /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/openmpi/espressomd/EspressoScriptInterface.so -- Installing: /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/openmpi/espressomd/_init.so -- Installing: /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/openmpi/espressomd/actors.so -- Installing: /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/openmpi/espressomd/analyze.so -- Installing: /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/openmpi/espressomd/cellsystem.so -- Installing: /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/openmpi/espressomd/collision_detection.so -- Installing: /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/openmpi/espressomd/cuda_init.so -- Installing: /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/openmpi/espressomd/diamond.so -- Installing: /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/openmpi/espressomd/electrokinetics.so -- Installing: /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/openmpi/espressomd/electrostatic_extensions.so -- Installing: /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/openmpi/espressomd/electrostatics.so -- Installing: /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/openmpi/espressomd/galilei.so -- Installing: /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/openmpi/espressomd/globals.so -- Installing: /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/openmpi/espressomd/integrate.so -- Installing: /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/openmpi/espressomd/interactions.so -- Installing: /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/openmpi/espressomd/lb.so -- Installing: /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/openmpi/espressomd/magnetostatic_extensions.so -- Installing: /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/openmpi/espressomd/magnetostatics.so -- Installing: /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/openmpi/espressomd/minimize_energy.so -- Installing: /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/openmpi/espressomd/particle_data.so -- Installing: /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/openmpi/espressomd/polymer.so -- Installing: /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/openmpi/espressomd/profiler.so -- Installing: /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/openmpi/espressomd/reaction_ensemble.so -- Installing: /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/openmpi/espressomd/scafacos.so -- Installing: /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/openmpi/espressomd/script_interface.so -- Installing: /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/openmpi/espressomd/system.so -- Installing: /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/openmpi/espressomd/thermostat.so -- Installing: /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/openmpi/espressomd/utils.so -- Installing: /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/openmpi/espressomd/version.so -- Installing: /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/openmpi/espressomd/visualization.so -- Installing: /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/openmpi/espressomd/visualization_mayavi.so -- Installing: /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/openmpi/espressomd/visualization_opengl.so -- Installing: /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/openmpi/espressomd/code_info.so -- Up-to-date: /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/openmpi/espressomd -- Installing: /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/openmpi/espressomd/MDA_ESP -- Installing: /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/openmpi/espressomd/MDA_ESP/__init__.py -- Installing: /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/openmpi/espressomd/io -- Installing: /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/openmpi/espressomd/io/mpiio.py -- Installing: /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/openmpi/espressomd/io/writer -- Installing: /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/openmpi/espressomd/io/writer/__init__.py -- Installing: /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/openmpi/espressomd/io/writer/vtf.py -- Installing: /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/openmpi/espressomd/io/writer/h5md.py -- Installing: /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/openmpi/espressomd/io/__init__.py -- Installing: /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/openmpi/espressomd/ekboundaries.py -- Installing: /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/openmpi/espressomd/gen_code_info.py -- Installing: /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/openmpi/espressomd/gen_pxiconfig.py -- Installing: /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/openmpi/espressomd/highlander.py -- Installing: /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/openmpi/espressomd/lbboundaries.py -- Installing: /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/openmpi/espressomd/observables.py -- Installing: /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/openmpi/espressomd/pair_criteria.py -- Installing: /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/openmpi/espressomd/shapes.py -- Installing: /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/openmpi/espressomd/virtual_sites.py -- Installing: /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/openmpi/espressomd/__cinit__.py -- Installing: /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/openmpi/espressomd/__init__.py -- Installing: /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/openmpi/espressomd/accumulators.py -- Installing: /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/openmpi/espressomd/checkpointing.py -- Installing: /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/openmpi/espressomd/cluster_analysis.py -- Installing: /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/openmpi/espressomd/comfixed.py -- Installing: /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/openmpi/espressomd/constraints.py -- Installing: /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/openmpi/espressomd/drude_helpers.py make: Leaving directory '/builddir/build/BUILD/espresso/openmpi' + module unload mpi/openmpi-x86_64 ++ /usr/share/lmod/lmod/libexec/lmod bash unload mpi/openmpi-x86_64 + eval unset '__LMOD_REF_COUNT_LD_LIBRARY_PATH;' unset 'LD_LIBRARY_PATH;' unset '__LMOD_REF_COUNT_LOADEDMODULES;' unset 'LOADEDMODULES;' '__LMOD_REF_COUNT_MANPATH=/usr/share/lmod/lmod/share/man:1;' export '__LMOD_REF_COUNT_MANPATH;' 'MANPATH=/usr/share/lmod/lmod/share/man;' export 'MANPATH;' 'MODULEPATH=/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core;' export 'MODULEPATH;' unset 'MPI_BIN;' unset 'MPI_COMPILER;' unset 'MPI_FORTRAN_MOD_DIR;' unset 'MPI_HOME;' unset 'MPI_INCLUDE;' unset 'MPI_LIB;' unset 'MPI_MAN;' unset 'MPI_PYTHON3_SITEARCH;' unset 'MPI_SUFFIX;' unset 'MPI_SYSCONFIG;' '__LMOD_REF_COUNT_PATH=/usr/bin:1\;/bin:1\;/usr/sbin:1\;/sbin:1\;/usr/local/sbin:1;' export '__LMOD_REF_COUNT_PATH;' 'PATH=/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin;' export 'PATH;' '__LMOD_REF_COUNT_PKG_CONFIG_PATH=/usr/lib64/pkgconfig:1\;/usr/share/pkgconfig:1;' export '__LMOD_REF_COUNT_PKG_CONFIG_PATH;' 'PKG_CONFIG_PATH=:/usr/lib64/pkgconfig:/usr/share/pkgconfig;' export 'PKG_CONFIG_PATH;' unset '__LMOD_REF_COUNT__LMFILES_;' unset '_LMFILES_;' '_ModuleTable001_=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;' export '_ModuleTable001_;' '_ModuleTable002_=cmUvbG1vZC9sbW9kL21vZHVsZWZpbGVzL0NvcmUiLH0=;' export '_ModuleTable002_;' '_ModuleTable_Sz_=2;' export '_ModuleTable_Sz_;' ++ unset __LMOD_REF_COUNT_LD_LIBRARY_PATH ++ unset LD_LIBRARY_PATH ++ unset __LMOD_REF_COUNT_LOADEDMODULES ++ unset LOADEDMODULES ++ __LMOD_REF_COUNT_MANPATH=/usr/share/lmod/lmod/share/man:1 ++ export __LMOD_REF_COUNT_MANPATH ++ MANPATH=/usr/share/lmod/lmod/share/man ++ export MANPATH ++ MODULEPATH=/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core ++ export MODULEPATH ++ unset MPI_BIN ++ unset MPI_COMPILER ++ unset MPI_FORTRAN_MOD_DIR ++ unset MPI_HOME ++ unset MPI_INCLUDE ++ unset MPI_LIB ++ unset MPI_MAN ++ unset MPI_PYTHON3_SITEARCH ++ unset MPI_SUFFIX ++ unset MPI_SYSCONFIG ++ __LMOD_REF_COUNT_PATH='/usr/bin:1;/bin:1;/usr/sbin:1;/sbin:1;/usr/local/sbin:1' ++ export __LMOD_REF_COUNT_PATH ++ PATH=/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin ++ export PATH ++ __LMOD_REF_COUNT_PKG_CONFIG_PATH='/usr/lib64/pkgconfig:1;/usr/share/pkgconfig:1' ++ export __LMOD_REF_COUNT_PKG_CONFIG_PATH ++ PKG_CONFIG_PATH=:/usr/lib64/pkgconfig:/usr/share/pkgconfig ++ export PKG_CONFIG_PATH ++ unset __LMOD_REF_COUNT__LMFILES_ ++ unset _LMFILES_ ++ _ModuleTable001_=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 ++ export _ModuleTable001_ ++ _ModuleTable002_=cmUvbG1vZC9sbW9kL21vZHVsZWZpbGVzL0NvcmUiLH0= ++ export _ModuleTable002_ ++ _ModuleTable_Sz_=2 ++ export _ModuleTable_Sz_ ++ : -s sh + eval + /usr/lib/rpm/find-debuginfo.sh -j6 --strict-build-id -m -i --build-id-seed 4.1.2-4.fc33 --unique-debug-suffix -4.1.2-4.fc33.x86_64 --unique-debug-src-base espresso-4.1.2-4.fc33.x86_64 --run-dwz --dwz-low-mem-die-limit 10000000 --dwz-max-die-limit 110000000 -S debugsourcefiles.list /builddir/build/BUILD/espresso explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/mpich/espressomd/EspressoCore.so explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/mpich/espressomd/EspressoConfig.so explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/mpich/espressomd/EspressoScriptInterface.so explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/mpich/espressomd/_init.so explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/mpich/espressomd/H5mdCore.so extracting debug info from /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/mpich/espressomd/EspressoCore.so extracting debug info from /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/mpich/espressomd/EspressoScriptInterface.so explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/mpich/espressomd/Shapes.so extracting debug info from /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/mpich/espressomd/EspressoConfig.so extracting debug info from /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/mpich/espressomd/_init.so extracting debug info from /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/mpich/espressomd/H5mdCore.so extracting debug info from /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/mpich/espressomd/Shapes.so explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/mpich/espressomd/actors.so extracting debug info from /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/mpich/espressomd/actors.so explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/mpich/espressomd/analyze.so extracting debug info from /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/mpich/espressomd/analyze.so explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/mpich/espressomd/cellsystem.so extracting debug info from /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/mpich/espressomd/cellsystem.so explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/mpich/espressomd/code_info.so extracting debug info from /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/mpich/espressomd/code_info.so explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/mpich/espressomd/collision_detection.so extracting debug info from /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/mpich/espressomd/collision_detection.so explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/mpich/espressomd/core_cluster_analysis.so extracting debug info from /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/mpich/espressomd/core_cluster_analysis.so explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/mpich/espressomd/cuda_init.so explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/mpich/espressomd/diamond.so extracting debug info from /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/mpich/espressomd/cuda_init.so extracting debug info from /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/mpich/espressomd/diamond.so explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/mpich/espressomd/electrokinetics.so extracting debug info from /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/mpich/espressomd/electrokinetics.so explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/mpich/espressomd/electrostatic_extensions.so extracting debug info from /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/mpich/espressomd/electrostatic_extensions.so explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/mpich/espressomd/electrostatics.so extracting debug info from /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/mpich/espressomd/electrostatics.so explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/mpich/espressomd/galilei.so extracting debug info from /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/mpich/espressomd/galilei.so explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/mpich/espressomd/globals.so extracting debug info from /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/mpich/espressomd/globals.so explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/mpich/espressomd/integrate.so extracting debug info from /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/mpich/espressomd/integrate.so explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/mpich/espressomd/interactions.so extracting debug info from /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/mpich/espressomd/interactions.so explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/mpich/espressomd/lb.so extracting debug info from /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/mpich/espressomd/lb.so explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/mpich/espressomd/magnetostatic_extensions.so extracting debug info from /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/mpich/espressomd/magnetostatic_extensions.so explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/mpich/espressomd/magnetostatics.so extracting debug info from /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/mpich/espressomd/magnetostatics.so explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/mpich/espressomd/minimize_energy.so extracting debug info from /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/mpich/espressomd/minimize_energy.so explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/mpich/espressomd/mpiio.so extracting debug info from /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/mpich/espressomd/mpiio.so explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/mpich/espressomd/particle_data.so extracting debug info from /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/mpich/espressomd/particle_data.so explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/mpich/espressomd/pdbparser.so extracting debug info from /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/mpich/espressomd/pdbparser.so explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/mpich/espressomd/pdbreader.so extracting debug info from /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/mpich/espressomd/pdbreader.so explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/mpich/espressomd/polymer.so extracting debug info from /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/mpich/espressomd/polymer.so explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/mpich/espressomd/profiler.so extracting debug info from /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/mpich/espressomd/profiler.so explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/mpich/espressomd/reaction_ensemble.so extracting debug info from /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/mpich/espressomd/reaction_ensemble.so explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/mpich/espressomd/scafacos.so extracting debug info from /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/mpich/espressomd/scafacos.so explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/mpich/espressomd/script_interface.so extracting debug info from /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/mpich/espressomd/script_interface.so explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/mpich/espressomd/system.so extracting debug info from /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/mpich/espressomd/system.so explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/mpich/espressomd/thermostat.so extracting debug info from /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/mpich/espressomd/thermostat.so explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/mpich/espressomd/utils.so extracting debug info from /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/mpich/espressomd/utils.so explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/mpich/espressomd/version.so extracting debug info from /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/mpich/espressomd/version.so explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/mpich/espressomd/visualization.so extracting debug info from /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/mpich/espressomd/visualization.so explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/mpich/espressomd/visualization_mayavi.so extracting debug info from /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/mpich/espressomd/visualization_mayavi.so explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/mpich/espressomd/visualization_opengl.so extracting debug info from /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/mpich/espressomd/visualization_opengl.so explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/openmpi/espressomd/EspressoConfig.so extracting debug info from /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/openmpi/espressomd/EspressoConfig.so explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/openmpi/espressomd/EspressoCore.so extracting debug info from /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/openmpi/espressomd/EspressoCore.so explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/openmpi/espressomd/EspressoScriptInterface.so extracting debug info from /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/openmpi/espressomd/EspressoScriptInterface.so explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/openmpi/espressomd/H5mdCore.so extracting debug info from /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/openmpi/espressomd/H5mdCore.so explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/openmpi/espressomd/Shapes.so extracting debug info from /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/openmpi/espressomd/Shapes.so explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/openmpi/espressomd/_init.so extracting debug info from /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/openmpi/espressomd/_init.so explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/openmpi/espressomd/actors.so extracting debug info from /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/openmpi/espressomd/actors.so explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/openmpi/espressomd/analyze.so extracting debug info from /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/openmpi/espressomd/analyze.so explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/openmpi/espressomd/cellsystem.so extracting debug info from /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/openmpi/espressomd/cellsystem.so explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/openmpi/espressomd/code_info.so extracting debug info from /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/openmpi/espressomd/code_info.so explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/openmpi/espressomd/collision_detection.so extracting debug info from /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/openmpi/espressomd/collision_detection.so explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/openmpi/espressomd/core_cluster_analysis.so extracting debug info from /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/openmpi/espressomd/core_cluster_analysis.so explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/openmpi/espressomd/cuda_init.so extracting debug info from /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/openmpi/espressomd/cuda_init.so explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/openmpi/espressomd/diamond.so extracting debug info from /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/openmpi/espressomd/diamond.so explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/openmpi/espressomd/electrokinetics.so extracting debug info from /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/openmpi/espressomd/electrokinetics.so explicitly decompress any DWARF 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decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/openmpi/espressomd/globals.so extracting debug info from /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/openmpi/espressomd/globals.so explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/openmpi/espressomd/integrate.so extracting debug info from /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/openmpi/espressomd/integrate.so explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/openmpi/espressomd/interactions.so explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/openmpi/espressomd/lb.so extracting debug info from /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/openmpi/espressomd/interactions.so extracting debug info from /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/openmpi/espressomd/lb.so explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/openmpi/espressomd/magnetostatic_extensions.so extracting debug info from /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/openmpi/espressomd/magnetostatic_extensions.so explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/openmpi/espressomd/magnetostatics.so extracting debug info from /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/openmpi/espressomd/magnetostatics.so explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/openmpi/espressomd/minimize_energy.so extracting debug info from /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/openmpi/espressomd/minimize_energy.so explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/openmpi/espressomd/mpiio.so extracting debug info from /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/openmpi/espressomd/mpiio.so explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/openmpi/espressomd/particle_data.so extracting debug info from /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/openmpi/espressomd/particle_data.so explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/openmpi/espressomd/pdbparser.so extracting debug info from /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/openmpi/espressomd/pdbparser.so explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/openmpi/espressomd/pdbreader.so extracting debug info from /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/openmpi/espressomd/pdbreader.so explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/openmpi/espressomd/polymer.so extracting debug info from /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/openmpi/espressomd/polymer.so explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/openmpi/espressomd/profiler.so extracting debug info from /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/openmpi/espressomd/profiler.so explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/openmpi/espressomd/reaction_ensemble.so extracting debug info from /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/openmpi/espressomd/reaction_ensemble.so explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/openmpi/espressomd/scafacos.so extracting debug info from /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/openmpi/espressomd/scafacos.so explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/openmpi/espressomd/script_interface.so extracting debug info from /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/openmpi/espressomd/script_interface.so explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/openmpi/espressomd/system.so extracting debug info from /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/openmpi/espressomd/system.so explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/openmpi/espressomd/thermostat.so extracting debug info from /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/openmpi/espressomd/thermostat.so explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/openmpi/espressomd/utils.so extracting debug info from /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/openmpi/espressomd/utils.so explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/openmpi/espressomd/version.so extracting debug info from /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/openmpi/espressomd/version.so explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/openmpi/espressomd/visualization.so extracting debug info from /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/openmpi/espressomd/visualization.so explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/openmpi/espressomd/visualization_mayavi.so extracting debug info from /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/openmpi/espressomd/visualization_mayavi.so explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/openmpi/espressomd/visualization_opengl.so extracting debug info from /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/openmpi/espressomd/visualization_opengl.so original debug info size: 358608kB, size after compression: 278168kB /usr/lib/rpm/sepdebugcrcfix: Updated 82 CRC32s, 0 CRC32s did match. 104303 blocks + /usr/lib/rpm/check-buildroot + /usr/lib/rpm/redhat/brp-ldconfig + /usr/lib/rpm/brp-compress + /usr/lib/rpm/redhat/brp-strip-lto /usr/bin/strip + /usr/lib/rpm/brp-strip-static-archive /usr/bin/strip + /usr/lib/rpm/redhat/brp-python-bytecompile /usr/bin/python 1 0 Bytecompiling .py files below /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9 using /usr/bin/python3.9 Bytecompiling .py files below /builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib/debug/usr/lib64/python3.9 using /usr/bin/python3.9 + /usr/lib/rpm/brp-python-hardlink + /usr/lib/rpm/redhat/brp-mangle-shebangs Executing(%check): /bin/sh -e /var/tmp/rpm-tmp.jkl6kN + umask 022 + cd /builddir/build/BUILD + cd espresso + for mpi in mpich openmpi + module load mpi/mpich-x86_64 ++ /usr/share/lmod/lmod/libexec/lmod bash load mpi/mpich-x86_64 + eval '__LMOD_REF_COUNT_LD_LIBRARY_PATH=/usr/lib64/mpich/lib:1;' export '__LMOD_REF_COUNT_LD_LIBRARY_PATH;' 'LD_LIBRARY_PATH=/usr/lib64/mpich/lib;' export 'LD_LIBRARY_PATH;' '__LMOD_REF_COUNT_LOADEDMODULES=mpi/mpich-x86_64:1;' export '__LMOD_REF_COUNT_LOADEDMODULES;' 'LOADEDMODULES=mpi/mpich-x86_64;' export 'LOADEDMODULES;' '__LMOD_REF_COUNT_MANPATH=/usr/share/man/mpich-x86_64:1\;/usr/share/lmod/lmod/share/man:1;' export '__LMOD_REF_COUNT_MANPATH;' 'MANPATH=:/usr/share/man/mpich-x86_64:/usr/share/lmod/lmod/share/man;' export 'MANPATH;' '__LMOD_REF_COUNT_MODULEPATH=/etc/modulefiles:1\;/usr/share/modulefiles:1\;/usr/share/modulefiles/Linux:1\;/usr/share/modulefiles/Core:1\;/usr/share/lmod/lmod/modulefiles/Core:1;' export '__LMOD_REF_COUNT_MODULEPATH;' 'MODULEPATH=/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core;' export 'MODULEPATH;' 'MPI_BIN=/usr/lib64/mpich/bin;' export 'MPI_BIN;' 'MPI_COMPILER=mpich-x86_64;' export 'MPI_COMPILER;' 'MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/mpich;' export 'MPI_FORTRAN_MOD_DIR;' 'MPI_HOME=/usr/lib64/mpich;' export 'MPI_HOME;' 'MPI_INCLUDE=/usr/include/mpich-x86_64;' export 'MPI_INCLUDE;' 'MPI_LIB=/usr/lib64/mpich/lib;' export 'MPI_LIB;' 'MPI_MAN=/usr/share/man/mpich-x86_64;' export 'MPI_MAN;' 'MPI_PYTHON2_SITEARCH=%\{python2_sitearch\}/mpich;' export 'MPI_PYTHON2_SITEARCH;' 'MPI_PYTHON3_SITEARCH=/usr/lib64/python3.9/site-packages/mpich;' export 'MPI_PYTHON3_SITEARCH;' 'MPI_PYTHON_SITEARCH=%\{python2_sitearch\}/mpich;' export 'MPI_PYTHON_SITEARCH;' 'MPI_SUFFIX=_mpich;' export 'MPI_SUFFIX;' 'MPI_SYSCONFIG=/etc/mpich-x86_64;' export 'MPI_SYSCONFIG;' '__LMOD_REF_COUNT_PATH=/usr/lib64/mpich/bin:1\;/usr/bin:1\;/bin:1\;/usr/sbin:1\;/sbin:1\;/usr/local/sbin:1;' export '__LMOD_REF_COUNT_PATH;' 'PATH=/usr/lib64/mpich/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin;' export 'PATH;' '__LMOD_REF_COUNT_PKG_CONFIG_PATH=/usr/lib64/mpich/lib/pkgconfig:1\;/usr/lib64/pkgconfig:1\;/usr/share/pkgconfig:1;' export '__LMOD_REF_COUNT_PKG_CONFIG_PATH;' 'PKG_CONFIG_PATH=/usr/lib64/mpich/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig;' export 'PKG_CONFIG_PATH;' '__LMOD_REF_COUNT__LMFILES_=/usr/share/modulefiles/mpi/mpich-x86_64:1;' export '__LMOD_REF_COUNT__LMFILES_;' '_LMFILES_=/usr/share/modulefiles/mpi/mpich-x86_64;' export '_LMFILES_;' '_ModuleTable001_=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;' export '_ModuleTable001_;' '_ModuleTable002_=bGVmaWxlcy9Db3JlIiwiL3Vzci9zaGFyZS9sbW9kL2xtb2QvbW9kdWxlZmlsZXMvQ29yZSIsfSxbInN5c3RlbUJhc2VNUEFUSCJdPSIvZXRjL21vZHVsZWZpbGVzOi91c3Ivc2hhcmUvbW9kdWxlZmlsZXM6L3Vzci9zaGFyZS9tb2R1bGVmaWxlcy9MaW51eDovdXNyL3NoYXJlL21vZHVsZWZpbGVzL0NvcmU6L3Vzci9zaGFyZS9sbW9kL2xtb2QvbW9kdWxlZmlsZXMvQ29yZSIsfQ==;' export '_ModuleTable002_;' '_ModuleTable_Sz_=2;' export '_ModuleTable_Sz_;' ++ __LMOD_REF_COUNT_LD_LIBRARY_PATH=/usr/lib64/mpich/lib:1 ++ export __LMOD_REF_COUNT_LD_LIBRARY_PATH ++ LD_LIBRARY_PATH=/usr/lib64/mpich/lib ++ export LD_LIBRARY_PATH ++ __LMOD_REF_COUNT_LOADEDMODULES=mpi/mpich-x86_64:1 ++ export __LMOD_REF_COUNT_LOADEDMODULES ++ LOADEDMODULES=mpi/mpich-x86_64 ++ export LOADEDMODULES ++ __LMOD_REF_COUNT_MANPATH='/usr/share/man/mpich-x86_64:1;/usr/share/lmod/lmod/share/man:1' ++ export __LMOD_REF_COUNT_MANPATH ++ MANPATH=:/usr/share/man/mpich-x86_64:/usr/share/lmod/lmod/share/man ++ export MANPATH ++ __LMOD_REF_COUNT_MODULEPATH='/etc/modulefiles:1;/usr/share/modulefiles:1;/usr/share/modulefiles/Linux:1;/usr/share/modulefiles/Core:1;/usr/share/lmod/lmod/modulefiles/Core:1' ++ export __LMOD_REF_COUNT_MODULEPATH ++ MODULEPATH=/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core ++ export MODULEPATH ++ MPI_BIN=/usr/lib64/mpich/bin ++ export MPI_BIN ++ MPI_COMPILER=mpich-x86_64 ++ export MPI_COMPILER ++ MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/mpich ++ export MPI_FORTRAN_MOD_DIR ++ MPI_HOME=/usr/lib64/mpich ++ export MPI_HOME ++ MPI_INCLUDE=/usr/include/mpich-x86_64 ++ export MPI_INCLUDE ++ MPI_LIB=/usr/lib64/mpich/lib ++ export MPI_LIB ++ MPI_MAN=/usr/share/man/mpich-x86_64 ++ export MPI_MAN ++ MPI_PYTHON2_SITEARCH='%{python2_sitearch}/mpich' ++ export MPI_PYTHON2_SITEARCH ++ MPI_PYTHON3_SITEARCH=/usr/lib64/python3.9/site-packages/mpich ++ export MPI_PYTHON3_SITEARCH ++ MPI_PYTHON_SITEARCH='%{python2_sitearch}/mpich' ++ export MPI_PYTHON_SITEARCH ++ MPI_SUFFIX=_mpich ++ export MPI_SUFFIX ++ MPI_SYSCONFIG=/etc/mpich-x86_64 ++ export MPI_SYSCONFIG ++ __LMOD_REF_COUNT_PATH='/usr/lib64/mpich/bin:1;/usr/bin:1;/bin:1;/usr/sbin:1;/sbin:1;/usr/local/sbin:1' ++ export __LMOD_REF_COUNT_PATH ++ PATH=/usr/lib64/mpich/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin ++ export PATH ++ __LMOD_REF_COUNT_PKG_CONFIG_PATH='/usr/lib64/mpich/lib/pkgconfig:1;/usr/lib64/pkgconfig:1;/usr/share/pkgconfig:1' ++ export __LMOD_REF_COUNT_PKG_CONFIG_PATH ++ PKG_CONFIG_PATH=/usr/lib64/mpich/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig ++ export PKG_CONFIG_PATH ++ __LMOD_REF_COUNT__LMFILES_=/usr/share/modulefiles/mpi/mpich-x86_64:1 ++ export __LMOD_REF_COUNT__LMFILES_ ++ _LMFILES_=/usr/share/modulefiles/mpi/mpich-x86_64 ++ export _LMFILES_ ++ _ModuleTable001_=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 ++ export _ModuleTable001_ ++ _ModuleTable002_=bGVmaWxlcy9Db3JlIiwiL3Vzci9zaGFyZS9sbW9kL2xtb2QvbW9kdWxlZmlsZXMvQ29yZSIsfSxbInN5c3RlbUJhc2VNUEFUSCJdPSIvZXRjL21vZHVsZWZpbGVzOi91c3Ivc2hhcmUvbW9kdWxlZmlsZXM6L3Vzci9zaGFyZS9tb2R1bGVmaWxlcy9MaW51eDovdXNyL3NoYXJlL21vZHVsZWZpbGVzL0NvcmU6L3Vzci9zaGFyZS9sbW9kL2xtb2QvbW9kdWxlZmlsZXMvQ29yZSIsfQ== ++ export _ModuleTable002_ ++ _ModuleTable_Sz_=2 ++ export _ModuleTable_Sz_ ++ : -s sh + eval + LD_LIBRARY_PATH=/usr/lib64/mpich/lib:/builddir/build/BUILDROOT/espresso-4.1.2-4.fc33.x86_64/usr/lib64/python3.9/site-packages/mpich/espressomd + make -C mpich check CTEST_OUTPUT_ON_FAILURE=1 make: Entering directory '/builddir/build/BUILD/espresso/mpich' /usr/bin/cmake -S/builddir/build/BUILD/espresso -B/builddir/build/BUILD/espresso/mpich --check-build-system CMakeFiles/Makefile.cmake 0 make -f CMakeFiles/Makefile2 check make[1]: Entering directory '/builddir/build/BUILD/espresso/mpich' /usr/bin/cmake -S/builddir/build/BUILD/espresso -B/builddir/build/BUILD/espresso/mpich --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/espresso/mpich/CMakeFiles 91 make -f CMakeFiles/Makefile2 CMakeFiles/check.dir/all make[2]: Entering directory '/builddir/build/BUILD/espresso/mpich' make -f src/pdbparser/CMakeFiles/pdbparser.dir/build.make src/pdbparser/CMakeFiles/pdbparser.dir/depend make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/pdbparser /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/pdbparser /builddir/build/BUILD/espresso/mpich/src/pdbparser/CMakeFiles/pdbparser.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' make -f src/pdbparser/CMakeFiles/pdbparser.dir/build.make src/pdbparser/CMakeFiles/pdbparser.dir/build make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' make[3]: Nothing to be done for 'src/pdbparser/CMakeFiles/pdbparser.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 1%] Built target pdbparser make -f src/config/CMakeFiles/generate_config_features.dir/build.make src/config/CMakeFiles/generate_config_features.dir/depend make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/config /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/config /builddir/build/BUILD/espresso/mpich/src/config/CMakeFiles/generate_config_features.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' make -f src/config/CMakeFiles/generate_config_features.dir/build.make src/config/CMakeFiles/generate_config_features.dir/build make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' make[3]: Nothing to be done for 'src/config/CMakeFiles/generate_config_features.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 1%] Built target generate_config_features make -f CMakeFiles/myconfig.dir/build.make CMakeFiles/myconfig.dir/depend make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/CMakeFiles/myconfig.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' make -f CMakeFiles/myconfig.dir/build.make CMakeFiles/myconfig.dir/build make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' make[3]: Nothing to be done for 'CMakeFiles/myconfig.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 1%] Built target myconfig make -f src/config/CMakeFiles/version.dir/build.make src/config/CMakeFiles/version.dir/depend make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/config /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/config /builddir/build/BUILD/espresso/mpich/src/config/CMakeFiles/version.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' make -f src/config/CMakeFiles/version.dir/build.make src/config/CMakeFiles/version.dir/build make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich/src/config && /usr/bin/cmake -DPROJECT_SOURCE_DIR=/builddir/build/BUILD/espresso -DPROJECT_VERSION=4.1.2 -DGIT_EXECUTABLE=GIT_EXECUTABLE-NOTFOUND -P /builddir/build/BUILD/espresso/cmake/version.cmake make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 1%] Built target version make -f src/config/CMakeFiles/check_myconfig.dir/build.make src/config/CMakeFiles/check_myconfig.dir/depend make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/config /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/config /builddir/build/BUILD/espresso/mpich/src/config/CMakeFiles/check_myconfig.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' make -f src/config/CMakeFiles/check_myconfig.dir/build.make src/config/CMakeFiles/check_myconfig.dir/build make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich/src/config && /usr/bin/python3 /builddir/build/BUILD/espresso/src/config/check_myconfig.py /usr/bin/g++ /builddir/build/BUILD/espresso/src/config/features.def /builddir/build/BUILD/espresso/mpich/src/config/myconfig-final.hpp cmake_config.hpp make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 1%] Built target check_myconfig make -f src/config/CMakeFiles/EspressoConfig.dir/build.make src/config/CMakeFiles/EspressoConfig.dir/depend make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/config /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/config /builddir/build/BUILD/espresso/mpich/src/config/CMakeFiles/EspressoConfig.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' make -f src/config/CMakeFiles/EspressoConfig.dir/build.make src/config/CMakeFiles/EspressoConfig.dir/build make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' make[3]: Nothing to be done for 'src/config/CMakeFiles/EspressoConfig.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 1%] Built target EspressoConfig make -f src/pdbparser/unit_tests/CMakeFiles/PdbParser_test.dir/build.make src/pdbparser/unit_tests/CMakeFiles/PdbParser_test.dir/depend make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/pdbparser/unit_tests /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/pdbparser/unit_tests /builddir/build/BUILD/espresso/mpich/src/pdbparser/unit_tests/CMakeFiles/PdbParser_test.dir/DependInfo.cmake --color= Scanning dependencies of target PdbParser_test make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' make -f src/pdbparser/unit_tests/CMakeFiles/PdbParser_test.dir/build.make src/pdbparser/unit_tests/CMakeFiles/PdbParser_test.dir/build make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' [ 2%] Building CXX object src/pdbparser/unit_tests/CMakeFiles/PdbParser_test.dir/PdbParser_test.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/pdbparser/unit_tests && /usr/bin/g++ -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/pdbparser/include -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -std=c++14 -o CMakeFiles/PdbParser_test.dir/PdbParser_test.cpp.o -c /builddir/build/BUILD/espresso/src/pdbparser/unit_tests/PdbParser_test.cpp [ 2%] Linking CXX executable PdbParser_test cd /builddir/build/BUILD/espresso/mpich/src/pdbparser/unit_tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/PdbParser_test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -Wl,-rpath,/usr/lib64/python3.9/site-packages/mpich/espressomd CMakeFiles/PdbParser_test.dir/PdbParser_test.cpp.o -o PdbParser_test /usr/lib64/libboost_unit_test_framework.so ../pdbparser.so ../../config/EspressoConfig.so make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 2%] Built target PdbParser_test make -f src/core/CMakeFiles/EspressoCore.dir/build.make src/core/CMakeFiles/EspressoCore.dir/depend make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/core /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/core /builddir/build/BUILD/espresso/mpich/src/core/CMakeFiles/EspressoCore.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' make -f src/core/CMakeFiles/EspressoCore.dir/build.make src/core/CMakeFiles/EspressoCore.dir/build make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' make[3]: Nothing to be done for 'src/core/CMakeFiles/EspressoCore.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 32%] Built target EspressoCore make -f src/core/io/writer/CMakeFiles/H5mdCore.dir/build.make src/core/io/writer/CMakeFiles/H5mdCore.dir/depend make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/core/io/writer /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/core/io/writer /builddir/build/BUILD/espresso/mpich/src/core/io/writer/CMakeFiles/H5mdCore.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' make -f src/core/io/writer/CMakeFiles/H5mdCore.dir/build.make src/core/io/writer/CMakeFiles/H5mdCore.dir/build make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' make[3]: Nothing to be done for 'src/core/io/writer/CMakeFiles/H5mdCore.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 34%] Built target H5mdCore make -f src/core/io/reader/CMakeFiles/pdbreader.dir/build.make src/core/io/reader/CMakeFiles/pdbreader.dir/depend make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/core/io/reader /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/core/io/reader /builddir/build/BUILD/espresso/mpich/src/core/io/reader/CMakeFiles/pdbreader.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' make -f src/core/io/reader/CMakeFiles/pdbreader.dir/build.make src/core/io/reader/CMakeFiles/pdbreader.dir/build make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' make[3]: Nothing to be done for 'src/core/io/reader/CMakeFiles/pdbreader.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 34%] Built target pdbreader make -f src/core/io/mpiio/CMakeFiles/mpiio.dir/build.make src/core/io/mpiio/CMakeFiles/mpiio.dir/depend make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/core/io/mpiio /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/core/io/mpiio /builddir/build/BUILD/espresso/mpich/src/core/io/mpiio/CMakeFiles/mpiio.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' make -f src/core/io/mpiio/CMakeFiles/mpiio.dir/build.make src/core/io/mpiio/CMakeFiles/mpiio.dir/build make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' make[3]: Nothing to be done for 'src/core/io/mpiio/CMakeFiles/mpiio.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 34%] Built target mpiio make -f src/core/shapes/CMakeFiles/Shapes.dir/build.make src/core/shapes/CMakeFiles/Shapes.dir/depend make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/core/shapes /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/core/shapes /builddir/build/BUILD/espresso/mpich/src/core/shapes/CMakeFiles/Shapes.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' make -f src/core/shapes/CMakeFiles/Shapes.dir/build.make src/core/shapes/CMakeFiles/Shapes.dir/build make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' make[3]: Nothing to be done for 'src/core/shapes/CMakeFiles/Shapes.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 37%] Built target Shapes make -f src/core/cluster_analysis/CMakeFiles/core_cluster_analysis.dir/build.make src/core/cluster_analysis/CMakeFiles/core_cluster_analysis.dir/depend make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/core/cluster_analysis /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/core/cluster_analysis /builddir/build/BUILD/espresso/mpich/src/core/cluster_analysis/CMakeFiles/core_cluster_analysis.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' make -f src/core/cluster_analysis/CMakeFiles/core_cluster_analysis.dir/build.make src/core/cluster_analysis/CMakeFiles/core_cluster_analysis.dir/build make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' make[3]: Nothing to be done for 'src/core/cluster_analysis/CMakeFiles/core_cluster_analysis.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 38%] Built target core_cluster_analysis make -f src/script_interface/CMakeFiles/EspressoScriptInterface.dir/build.make src/script_interface/CMakeFiles/EspressoScriptInterface.dir/depend make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/script_interface /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/script_interface /builddir/build/BUILD/espresso/mpich/src/script_interface/CMakeFiles/EspressoScriptInterface.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' make -f src/script_interface/CMakeFiles/EspressoScriptInterface.dir/build.make src/script_interface/CMakeFiles/EspressoScriptInterface.dir/build make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' make[3]: Nothing to be done for 'src/script_interface/CMakeFiles/EspressoScriptInterface.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 41%] Built target EspressoScriptInterface make -f src/core/unit_tests/CMakeFiles/AutoParameter_test.dir/build.make src/core/unit_tests/CMakeFiles/AutoParameter_test.dir/depend make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/core/unit_tests /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/core/unit_tests /builddir/build/BUILD/espresso/mpich/src/core/unit_tests/CMakeFiles/AutoParameter_test.dir/DependInfo.cmake --color= Scanning dependencies of target AutoParameter_test make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' make -f src/core/unit_tests/CMakeFiles/AutoParameter_test.dir/build.make src/core/unit_tests/CMakeFiles/AutoParameter_test.dir/build make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' [ 42%] Building CXX object src/core/unit_tests/CMakeFiles/AutoParameter_test.dir/AutoParameter_test.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/core/unit_tests && /usr/bin/g++ -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/script_interface -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/core/io/mpiio -I/builddir/build/BUILD/espresso/src/core/io/reader -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/AutoParameter_test.dir/AutoParameter_test.cpp.o -c /builddir/build/BUILD/espresso/src/core/unit_tests/AutoParameter_test.cpp [ 42%] Linking CXX executable AutoParameter_test cd /builddir/build/BUILD/espresso/mpich/src/core/unit_tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/AutoParameter_test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -Wl,-rpath,/usr/lib64/python3.9/site-packages/mpich/espressomd -Wl,--as-needed -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags CMakeFiles/AutoParameter_test.dir/AutoParameter_test.cpp.o -o AutoParameter_test /usr/lib64/libboost_unit_test_framework.so ../../script_interface/EspressoScriptInterface.so ../shapes/Shapes.so ../cluster_analysis/core_cluster_analysis.so ../io/mpiio/mpiio.so ../io/reader/pdbreader.so ../EspressoCore.so ../../config/EspressoConfig.so /usr/lib64/mpich/lib/libboost_mpi.so /usr/lib64/libboost_serialization.so ../../pdbparser/pdbparser.so /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so -Wl,-rpath-link,/builddir/build/BUILD/espresso/mpich/src/core/io/writer:/usr/lib64/mpich/lib make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 42%] Built target AutoParameter_test make -f src/core/unit_tests/CMakeFiles/Variant_test.dir/build.make src/core/unit_tests/CMakeFiles/Variant_test.dir/depend make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/core/unit_tests /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/core/unit_tests /builddir/build/BUILD/espresso/mpich/src/core/unit_tests/CMakeFiles/Variant_test.dir/DependInfo.cmake --color= Scanning dependencies of target Variant_test make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' make -f src/core/unit_tests/CMakeFiles/Variant_test.dir/build.make src/core/unit_tests/CMakeFiles/Variant_test.dir/build make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' [ 42%] Building CXX object src/core/unit_tests/CMakeFiles/Variant_test.dir/Variant_test.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/core/unit_tests && /usr/bin/g++ -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/script_interface -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/core/io/mpiio -I/builddir/build/BUILD/espresso/src/core/io/reader -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/Variant_test.dir/Variant_test.cpp.o -c /builddir/build/BUILD/espresso/src/core/unit_tests/Variant_test.cpp [ 42%] Linking CXX executable Variant_test cd /builddir/build/BUILD/espresso/mpich/src/core/unit_tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/Variant_test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -Wl,-rpath,/usr/lib64/python3.9/site-packages/mpich/espressomd -Wl,--as-needed -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags CMakeFiles/Variant_test.dir/Variant_test.cpp.o -o Variant_test /usr/lib64/libboost_unit_test_framework.so ../../script_interface/EspressoScriptInterface.so ../shapes/Shapes.so ../cluster_analysis/core_cluster_analysis.so ../io/mpiio/mpiio.so ../io/reader/pdbreader.so ../EspressoCore.so ../../config/EspressoConfig.so /usr/lib64/mpich/lib/libboost_mpi.so /usr/lib64/libboost_serialization.so ../../pdbparser/pdbparser.so /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so -Wl,-rpath-link,/builddir/build/BUILD/espresso/mpich/src/core/io/writer:/usr/lib64/mpich/lib make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 42%] Built target Variant_test make -f src/core/unit_tests/CMakeFiles/AutoParameters_test.dir/build.make src/core/unit_tests/CMakeFiles/AutoParameters_test.dir/depend make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/core/unit_tests /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/core/unit_tests /builddir/build/BUILD/espresso/mpich/src/core/unit_tests/CMakeFiles/AutoParameters_test.dir/DependInfo.cmake --color= Scanning dependencies of target AutoParameters_test make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' make -f src/core/unit_tests/CMakeFiles/AutoParameters_test.dir/build.make src/core/unit_tests/CMakeFiles/AutoParameters_test.dir/build make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' [ 42%] Building CXX object src/core/unit_tests/CMakeFiles/AutoParameters_test.dir/AutoParameters_test.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/core/unit_tests && /usr/bin/g++ -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/script_interface -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/core/io/mpiio -I/builddir/build/BUILD/espresso/src/core/io/reader -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/AutoParameters_test.dir/AutoParameters_test.cpp.o -c /builddir/build/BUILD/espresso/src/core/unit_tests/AutoParameters_test.cpp [ 42%] Linking CXX executable AutoParameters_test cd /builddir/build/BUILD/espresso/mpich/src/core/unit_tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/AutoParameters_test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -Wl,-rpath,/usr/lib64/python3.9/site-packages/mpich/espressomd -Wl,--as-needed -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags CMakeFiles/AutoParameters_test.dir/AutoParameters_test.cpp.o -o AutoParameters_test /usr/lib64/libboost_unit_test_framework.so ../../script_interface/EspressoScriptInterface.so ../shapes/Shapes.so ../cluster_analysis/core_cluster_analysis.so ../io/mpiio/mpiio.so ../io/reader/pdbreader.so ../EspressoCore.so ../../config/EspressoConfig.so /usr/lib64/mpich/lib/libboost_mpi.so /usr/lib64/libboost_serialization.so ../../pdbparser/pdbparser.so /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so -Wl,-rpath-link,/builddir/build/BUILD/espresso/mpich/src/core/io/writer:/usr/lib64/mpich/lib make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 42%] Built target AutoParameters_test make -f src/core/unit_tests/CMakeFiles/ParallelScriptInterface_test.dir/build.make src/core/unit_tests/CMakeFiles/ParallelScriptInterface_test.dir/depend make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/core/unit_tests /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/core/unit_tests /builddir/build/BUILD/espresso/mpich/src/core/unit_tests/CMakeFiles/ParallelScriptInterface_test.dir/DependInfo.cmake --color= Scanning dependencies of target ParallelScriptInterface_test make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' make -f src/core/unit_tests/CMakeFiles/ParallelScriptInterface_test.dir/build.make src/core/unit_tests/CMakeFiles/ParallelScriptInterface_test.dir/build make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' [ 42%] Building CXX object src/core/unit_tests/CMakeFiles/ParallelScriptInterface_test.dir/ParallelScriptInterface_test.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/core/unit_tests && /usr/bin/g++ -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/script_interface -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/core/io/mpiio -I/builddir/build/BUILD/espresso/src/core/io/reader -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/ParallelScriptInterface_test.dir/ParallelScriptInterface_test.cpp.o -c /builddir/build/BUILD/espresso/src/core/unit_tests/ParallelScriptInterface_test.cpp [ 42%] Linking CXX executable ParallelScriptInterface_test cd /builddir/build/BUILD/espresso/mpich/src/core/unit_tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/ParallelScriptInterface_test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -Wl,-rpath,/usr/lib64/python3.9/site-packages/mpich/espressomd -Wl,--as-needed -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags CMakeFiles/ParallelScriptInterface_test.dir/ParallelScriptInterface_test.cpp.o -o ParallelScriptInterface_test /usr/lib64/libboost_unit_test_framework.so ../../script_interface/EspressoScriptInterface.so /usr/lib64/mpich/lib/libboost_mpi.so ../shapes/Shapes.so ../cluster_analysis/core_cluster_analysis.so ../io/mpiio/mpiio.so ../io/reader/pdbreader.so ../EspressoCore.so /usr/lib64/mpich/lib/libboost_mpi.so /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so ../../config/EspressoConfig.so /usr/lib64/libboost_serialization.so ../../pdbparser/pdbparser.so -Wl,-rpath-link,/builddir/build/BUILD/espresso/mpich/src/core/io/writer:/usr/lib64/mpich/lib make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 42%] Built target ParallelScriptInterface_test make -f src/core/unit_tests/CMakeFiles/verlet_ia_test.dir/build.make src/core/unit_tests/CMakeFiles/verlet_ia_test.dir/depend make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/core/unit_tests /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/core/unit_tests /builddir/build/BUILD/espresso/mpich/src/core/unit_tests/CMakeFiles/verlet_ia_test.dir/DependInfo.cmake --color= Scanning dependencies of target verlet_ia_test make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' make -f src/core/unit_tests/CMakeFiles/verlet_ia_test.dir/build.make src/core/unit_tests/CMakeFiles/verlet_ia_test.dir/build make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' [ 42%] Building CXX object src/core/unit_tests/CMakeFiles/verlet_ia_test.dir/verlet_ia_test.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/core/unit_tests && /usr/bin/g++ -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -std=c++14 -o CMakeFiles/verlet_ia_test.dir/verlet_ia_test.cpp.o -c /builddir/build/BUILD/espresso/src/core/unit_tests/verlet_ia_test.cpp [ 43%] Linking CXX executable verlet_ia_test cd /builddir/build/BUILD/espresso/mpich/src/core/unit_tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/verlet_ia_test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -Wl,-rpath,/usr/lib64/python3.9/site-packages/mpich/espressomd CMakeFiles/verlet_ia_test.dir/verlet_ia_test.cpp.o -o verlet_ia_test /usr/lib64/libboost_unit_test_framework.so ../../config/EspressoConfig.so make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 43%] Built target verlet_ia_test make -f src/core/unit_tests/CMakeFiles/Ellipsoid_test.dir/build.make src/core/unit_tests/CMakeFiles/Ellipsoid_test.dir/depend make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/core/unit_tests /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/core/unit_tests /builddir/build/BUILD/espresso/mpich/src/core/unit_tests/CMakeFiles/Ellipsoid_test.dir/DependInfo.cmake --color= Scanning dependencies of target Ellipsoid_test make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' make -f src/core/unit_tests/CMakeFiles/Ellipsoid_test.dir/build.make src/core/unit_tests/CMakeFiles/Ellipsoid_test.dir/build make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' [ 45%] Building CXX object src/core/unit_tests/CMakeFiles/Ellipsoid_test.dir/Ellipsoid_test.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/core/unit_tests && /usr/bin/g++ -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/utils/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/Ellipsoid_test.dir/Ellipsoid_test.cpp.o -c /builddir/build/BUILD/espresso/src/core/unit_tests/Ellipsoid_test.cpp [ 45%] Linking CXX executable Ellipsoid_test cd /builddir/build/BUILD/espresso/mpich/src/core/unit_tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/Ellipsoid_test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -Wl,-rpath,/usr/lib64/python3.9/site-packages/mpich/espressomd -Wl,--as-needed -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags CMakeFiles/Ellipsoid_test.dir/Ellipsoid_test.cpp.o -o Ellipsoid_test /usr/lib64/libboost_unit_test_framework.so ../shapes/Shapes.so ../EspressoCore.so ../../config/EspressoConfig.so /usr/lib64/mpich/lib/libboost_mpi.so /usr/lib64/libboost_serialization.so /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so -Wl,-rpath-link,/builddir/build/BUILD/espresso/mpich/src/pdbparser make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 45%] Built target Ellipsoid_test make -f src/core/unit_tests/CMakeFiles/ParticleIterator_test.dir/build.make src/core/unit_tests/CMakeFiles/ParticleIterator_test.dir/depend make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/core/unit_tests /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/core/unit_tests /builddir/build/BUILD/espresso/mpich/src/core/unit_tests/CMakeFiles/ParticleIterator_test.dir/DependInfo.cmake --color= Scanning dependencies of target ParticleIterator_test make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' make -f src/core/unit_tests/CMakeFiles/ParticleIterator_test.dir/build.make src/core/unit_tests/CMakeFiles/ParticleIterator_test.dir/build make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' [ 45%] Building CXX object src/core/unit_tests/CMakeFiles/ParticleIterator_test.dir/ParticleIterator_test.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/core/unit_tests && /usr/bin/g++ -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -std=c++14 -o CMakeFiles/ParticleIterator_test.dir/ParticleIterator_test.cpp.o -c /builddir/build/BUILD/espresso/src/core/unit_tests/ParticleIterator_test.cpp [ 45%] Linking CXX executable ParticleIterator_test cd /builddir/build/BUILD/espresso/mpich/src/core/unit_tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/ParticleIterator_test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -Wl,-rpath,/usr/lib64/python3.9/site-packages/mpich/espressomd CMakeFiles/ParticleIterator_test.dir/ParticleIterator_test.cpp.o -o ParticleIterator_test /usr/lib64/libboost_unit_test_framework.so ../../config/EspressoConfig.so make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 45%] Built target ParticleIterator_test make -f src/core/unit_tests/CMakeFiles/field_coupling_force_field.dir/build.make src/core/unit_tests/CMakeFiles/field_coupling_force_field.dir/depend make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/core/unit_tests /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/core/unit_tests /builddir/build/BUILD/espresso/mpich/src/core/unit_tests/CMakeFiles/field_coupling_force_field.dir/DependInfo.cmake --color= Scanning dependencies of target field_coupling_force_field make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' make -f src/core/unit_tests/CMakeFiles/field_coupling_force_field.dir/build.make src/core/unit_tests/CMakeFiles/field_coupling_force_field.dir/build make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' [ 45%] Building CXX object src/core/unit_tests/CMakeFiles/field_coupling_force_field.dir/field_coupling_force_field_test.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/core/unit_tests && /usr/bin/g++ -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -std=c++14 -o CMakeFiles/field_coupling_force_field.dir/field_coupling_force_field_test.cpp.o -c /builddir/build/BUILD/espresso/src/core/unit_tests/field_coupling_force_field_test.cpp [ 45%] Linking CXX executable field_coupling_force_field cd /builddir/build/BUILD/espresso/mpich/src/core/unit_tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/field_coupling_force_field.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -Wl,-rpath,/usr/lib64/python3.9/site-packages/mpich/espressomd CMakeFiles/field_coupling_force_field.dir/field_coupling_force_field_test.cpp.o -o field_coupling_force_field /usr/lib64/libboost_unit_test_framework.so ../../config/EspressoConfig.so make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 45%] Built target field_coupling_force_field make -f src/core/unit_tests/CMakeFiles/RuntimeError_test.dir/build.make src/core/unit_tests/CMakeFiles/RuntimeError_test.dir/depend make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/core/unit_tests /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/core/unit_tests /builddir/build/BUILD/espresso/mpich/src/core/unit_tests/CMakeFiles/RuntimeError_test.dir/DependInfo.cmake --color= Scanning dependencies of target RuntimeError_test make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' make -f src/core/unit_tests/CMakeFiles/RuntimeError_test.dir/build.make src/core/unit_tests/CMakeFiles/RuntimeError_test.dir/build make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' [ 45%] Building CXX object src/core/unit_tests/CMakeFiles/RuntimeError_test.dir/RuntimeError_test.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/core/unit_tests && /usr/bin/g++ -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -std=c++14 -o CMakeFiles/RuntimeError_test.dir/RuntimeError_test.cpp.o -c /builddir/build/BUILD/espresso/src/core/unit_tests/RuntimeError_test.cpp [ 45%] Linking CXX executable RuntimeError_test cd /builddir/build/BUILD/espresso/mpich/src/core/unit_tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/RuntimeError_test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -Wl,-rpath,/usr/lib64/python3.9/site-packages/mpich/espressomd CMakeFiles/RuntimeError_test.dir/RuntimeError_test.cpp.o -o RuntimeError_test /usr/lib64/libboost_unit_test_framework.so /usr/lib64/libboost_serialization.so ../../config/EspressoConfig.so make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 45%] Built target RuntimeError_test make -f src/core/unit_tests/CMakeFiles/link_cell_test.dir/build.make src/core/unit_tests/CMakeFiles/link_cell_test.dir/depend make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/core/unit_tests /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/core/unit_tests /builddir/build/BUILD/espresso/mpich/src/core/unit_tests/CMakeFiles/link_cell_test.dir/DependInfo.cmake --color= Scanning dependencies of target link_cell_test make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' make -f src/core/unit_tests/CMakeFiles/link_cell_test.dir/build.make src/core/unit_tests/CMakeFiles/link_cell_test.dir/build make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' [ 45%] Building CXX object src/core/unit_tests/CMakeFiles/link_cell_test.dir/link_cell_test.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/core/unit_tests && /usr/bin/g++ -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -std=c++14 -o CMakeFiles/link_cell_test.dir/link_cell_test.cpp.o -c /builddir/build/BUILD/espresso/src/core/unit_tests/link_cell_test.cpp [ 46%] Linking CXX executable link_cell_test cd /builddir/build/BUILD/espresso/mpich/src/core/unit_tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/link_cell_test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -Wl,-rpath,/usr/lib64/python3.9/site-packages/mpich/espressomd CMakeFiles/link_cell_test.dir/link_cell_test.cpp.o -o link_cell_test /usr/lib64/libboost_unit_test_framework.so ../../config/EspressoConfig.so make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 46%] Built target link_cell_test make -f src/core/unit_tests/CMakeFiles/ParticleCache_test.dir/build.make src/core/unit_tests/CMakeFiles/ParticleCache_test.dir/depend make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/core/unit_tests /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/core/unit_tests /builddir/build/BUILD/espresso/mpich/src/core/unit_tests/CMakeFiles/ParticleCache_test.dir/DependInfo.cmake --color= Scanning dependencies of target ParticleCache_test make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' make -f src/core/unit_tests/CMakeFiles/ParticleCache_test.dir/build.make src/core/unit_tests/CMakeFiles/ParticleCache_test.dir/build make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' [ 46%] Building CXX object src/core/unit_tests/CMakeFiles/ParticleCache_test.dir/ParticleCache_test.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/core/unit_tests && /usr/bin/g++ -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -isystem /usr/include/mpich-x86_64 -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/ParticleCache_test.dir/ParticleCache_test.cpp.o -c /builddir/build/BUILD/espresso/src/core/unit_tests/ParticleCache_test.cpp [ 47%] Linking CXX executable ParticleCache_test cd /builddir/build/BUILD/espresso/mpich/src/core/unit_tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/ParticleCache_test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -Wl,-rpath,/usr/lib64/python3.9/site-packages/mpich/espressomd -Wl,--as-needed -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags CMakeFiles/ParticleCache_test.dir/ParticleCache_test.cpp.o -o ParticleCache_test /usr/lib64/libboost_unit_test_framework.so /usr/lib64/mpich/lib/libboost_mpi.so /usr/lib64/libboost_serialization.so ../../config/EspressoConfig.so /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 47%] Built target ParticleCache_test make -f src/core/unit_tests/CMakeFiles/ScriptInterface_test.dir/build.make src/core/unit_tests/CMakeFiles/ScriptInterface_test.dir/depend make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/core/unit_tests /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/core/unit_tests /builddir/build/BUILD/espresso/mpich/src/core/unit_tests/CMakeFiles/ScriptInterface_test.dir/DependInfo.cmake --color= Scanning dependencies of target ScriptInterface_test make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' make -f src/core/unit_tests/CMakeFiles/ScriptInterface_test.dir/build.make src/core/unit_tests/CMakeFiles/ScriptInterface_test.dir/build make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' [ 47%] Building CXX object src/core/unit_tests/CMakeFiles/ScriptInterface_test.dir/ScriptInterface_test.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/core/unit_tests && /usr/bin/g++ -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/script_interface -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/core/io/mpiio -I/builddir/build/BUILD/espresso/src/core/io/reader -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/ScriptInterface_test.dir/ScriptInterface_test.cpp.o -c /builddir/build/BUILD/espresso/src/core/unit_tests/ScriptInterface_test.cpp [ 47%] Linking CXX executable ScriptInterface_test cd /builddir/build/BUILD/espresso/mpich/src/core/unit_tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/ScriptInterface_test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -Wl,-rpath,/usr/lib64/python3.9/site-packages/mpich/espressomd -Wl,--as-needed -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags CMakeFiles/ScriptInterface_test.dir/ScriptInterface_test.cpp.o -o ScriptInterface_test /usr/lib64/libboost_unit_test_framework.so ../../script_interface/EspressoScriptInterface.so ../shapes/Shapes.so ../cluster_analysis/core_cluster_analysis.so ../io/mpiio/mpiio.so ../io/reader/pdbreader.so ../EspressoCore.so ../../config/EspressoConfig.so /usr/lib64/mpich/lib/libboost_mpi.so /usr/lib64/libboost_serialization.so ../../pdbparser/pdbparser.so /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so -Wl,-rpath-link,/builddir/build/BUILD/espresso/mpich/src/core/io/writer:/usr/lib64/mpich/lib make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 47%] Built target ScriptInterface_test make -f src/core/unit_tests/CMakeFiles/Particle_test.dir/build.make src/core/unit_tests/CMakeFiles/Particle_test.dir/depend make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/core/unit_tests /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/core/unit_tests /builddir/build/BUILD/espresso/mpich/src/core/unit_tests/CMakeFiles/Particle_test.dir/DependInfo.cmake --color= Scanning dependencies of target Particle_test make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' make -f src/core/unit_tests/CMakeFiles/Particle_test.dir/build.make src/core/unit_tests/CMakeFiles/Particle_test.dir/build make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' [ 47%] Building CXX object src/core/unit_tests/CMakeFiles/Particle_test.dir/Particle_test.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/core/unit_tests && /usr/bin/g++ -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -std=c++14 -o CMakeFiles/Particle_test.dir/Particle_test.cpp.o -c /builddir/build/BUILD/espresso/src/core/unit_tests/Particle_test.cpp [ 47%] Linking CXX executable Particle_test cd /builddir/build/BUILD/espresso/mpich/src/core/unit_tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/Particle_test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -Wl,-rpath,/usr/lib64/python3.9/site-packages/mpich/espressomd CMakeFiles/Particle_test.dir/Particle_test.cpp.o -o Particle_test /usr/lib64/libboost_unit_test_framework.so /usr/lib64/libboost_serialization.so ../../config/EspressoConfig.so make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 47%] Built target Particle_test make -f src/core/unit_tests/CMakeFiles/field_coupling_couplings.dir/build.make src/core/unit_tests/CMakeFiles/field_coupling_couplings.dir/depend make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/core/unit_tests /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/core/unit_tests /builddir/build/BUILD/espresso/mpich/src/core/unit_tests/CMakeFiles/field_coupling_couplings.dir/DependInfo.cmake --color= Scanning dependencies of target field_coupling_couplings make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' make -f src/core/unit_tests/CMakeFiles/field_coupling_couplings.dir/build.make src/core/unit_tests/CMakeFiles/field_coupling_couplings.dir/build make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' [ 47%] Building CXX object src/core/unit_tests/CMakeFiles/field_coupling_couplings.dir/field_coupling_couplings_test.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/core/unit_tests && /usr/bin/g++ -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -std=c++14 -o CMakeFiles/field_coupling_couplings.dir/field_coupling_couplings_test.cpp.o -c /builddir/build/BUILD/espresso/src/core/unit_tests/field_coupling_couplings_test.cpp [ 47%] Linking CXX executable field_coupling_couplings cd /builddir/build/BUILD/espresso/mpich/src/core/unit_tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/field_coupling_couplings.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -Wl,-rpath,/usr/lib64/python3.9/site-packages/mpich/espressomd CMakeFiles/field_coupling_couplings.dir/field_coupling_couplings_test.cpp.o -o field_coupling_couplings /usr/lib64/libboost_unit_test_framework.so ../../config/EspressoConfig.so make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 47%] Built target field_coupling_couplings make -f src/core/unit_tests/CMakeFiles/periodic_fold_test.dir/build.make src/core/unit_tests/CMakeFiles/periodic_fold_test.dir/depend make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/core/unit_tests /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/core/unit_tests /builddir/build/BUILD/espresso/mpich/src/core/unit_tests/CMakeFiles/periodic_fold_test.dir/DependInfo.cmake --color= Scanning dependencies of target periodic_fold_test make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' make -f src/core/unit_tests/CMakeFiles/periodic_fold_test.dir/build.make src/core/unit_tests/CMakeFiles/periodic_fold_test.dir/build make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' [ 47%] Building CXX object src/core/unit_tests/CMakeFiles/periodic_fold_test.dir/periodic_fold_test.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/core/unit_tests && /usr/bin/g++ -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -std=c++14 -o CMakeFiles/periodic_fold_test.dir/periodic_fold_test.cpp.o -c /builddir/build/BUILD/espresso/src/core/unit_tests/periodic_fold_test.cpp [ 47%] Linking CXX executable periodic_fold_test cd /builddir/build/BUILD/espresso/mpich/src/core/unit_tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/periodic_fold_test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -Wl,-rpath,/usr/lib64/python3.9/site-packages/mpich/espressomd CMakeFiles/periodic_fold_test.dir/periodic_fold_test.cpp.o -o periodic_fold_test /usr/lib64/libboost_unit_test_framework.so ../../config/EspressoConfig.so make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 47%] Built target periodic_fold_test make -f src/core/unit_tests/CMakeFiles/get_value.dir/build.make src/core/unit_tests/CMakeFiles/get_value.dir/depend make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/core/unit_tests /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/core/unit_tests /builddir/build/BUILD/espresso/mpich/src/core/unit_tests/CMakeFiles/get_value.dir/DependInfo.cmake --color= Scanning dependencies of target get_value make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' make -f src/core/unit_tests/CMakeFiles/get_value.dir/build.make src/core/unit_tests/CMakeFiles/get_value.dir/build make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' [ 47%] Building CXX object src/core/unit_tests/CMakeFiles/get_value.dir/get_value_test.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/core/unit_tests && /usr/bin/g++ -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/script_interface -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/core/io/mpiio -I/builddir/build/BUILD/espresso/src/core/io/reader -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/get_value.dir/get_value_test.cpp.o -c /builddir/build/BUILD/espresso/src/core/unit_tests/get_value_test.cpp [ 48%] Linking CXX executable get_value cd /builddir/build/BUILD/espresso/mpich/src/core/unit_tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/get_value.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -Wl,-rpath,/usr/lib64/python3.9/site-packages/mpich/espressomd -Wl,--as-needed -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags CMakeFiles/get_value.dir/get_value_test.cpp.o -o get_value /usr/lib64/libboost_unit_test_framework.so ../../script_interface/EspressoScriptInterface.so ../shapes/Shapes.so ../cluster_analysis/core_cluster_analysis.so ../io/mpiio/mpiio.so ../io/reader/pdbreader.so ../EspressoCore.so ../../config/EspressoConfig.so /usr/lib64/mpich/lib/libboost_mpi.so /usr/lib64/libboost_serialization.so ../../pdbparser/pdbparser.so /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so -Wl,-rpath-link,/builddir/build/BUILD/espresso/mpich/src/core/io/writer:/usr/lib64/mpich/lib make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 48%] Built target get_value make -f src/core/unit_tests/CMakeFiles/MpiCallbacks_test.dir/build.make src/core/unit_tests/CMakeFiles/MpiCallbacks_test.dir/depend make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/core/unit_tests /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/core/unit_tests /builddir/build/BUILD/espresso/mpich/src/core/unit_tests/CMakeFiles/MpiCallbacks_test.dir/DependInfo.cmake --color= Scanning dependencies of target MpiCallbacks_test make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' make -f src/core/unit_tests/CMakeFiles/MpiCallbacks_test.dir/build.make src/core/unit_tests/CMakeFiles/MpiCallbacks_test.dir/build make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' [ 49%] Building CXX object src/core/unit_tests/CMakeFiles/MpiCallbacks_test.dir/MpiCallbacks_test.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/core/unit_tests && /usr/bin/g++ -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -isystem /usr/include/mpich-x86_64 -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/MpiCallbacks_test.dir/MpiCallbacks_test.cpp.o -c /builddir/build/BUILD/espresso/src/core/unit_tests/MpiCallbacks_test.cpp [ 49%] Linking CXX executable MpiCallbacks_test cd /builddir/build/BUILD/espresso/mpich/src/core/unit_tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/MpiCallbacks_test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -Wl,-rpath,/usr/lib64/python3.9/site-packages/mpich/espressomd -Wl,--as-needed -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags CMakeFiles/MpiCallbacks_test.dir/MpiCallbacks_test.cpp.o -o MpiCallbacks_test /usr/lib64/libboost_unit_test_framework.so /usr/lib64/mpich/lib/libboost_mpi.so ../../config/EspressoConfig.so /usr/lib64/libboost_serialization.so /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 49%] Built target MpiCallbacks_test make -f src/core/unit_tests/CMakeFiles/field_coupling_fields.dir/build.make src/core/unit_tests/CMakeFiles/field_coupling_fields.dir/depend make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/core/unit_tests /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/core/unit_tests 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-fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -std=c++14 -o CMakeFiles/field_coupling_fields.dir/field_coupling_fields_test.cpp.o -c /builddir/build/BUILD/espresso/src/core/unit_tests/field_coupling_fields_test.cpp [ 50%] Linking CXX executable field_coupling_fields cd /builddir/build/BUILD/espresso/mpich/src/core/unit_tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/field_coupling_fields.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -Wl,-rpath,/usr/lib64/python3.9/site-packages/mpich/espressomd CMakeFiles/field_coupling_fields.dir/field_coupling_fields_test.cpp.o -o field_coupling_fields /usr/lib64/libboost_unit_test_framework.so ../../config/EspressoConfig.so make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 50%] Built target field_coupling_fields make -f src/core/unit_tests/CMakeFiles/LocalBox_test.dir/build.make src/core/unit_tests/CMakeFiles/LocalBox_test.dir/depend make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/core/unit_tests 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/builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/LocalBox_test.dir/LocalBox_test.cpp.o -c /builddir/build/BUILD/espresso/src/core/unit_tests/LocalBox_test.cpp [ 50%] Linking CXX executable LocalBox_test cd /builddir/build/BUILD/espresso/mpich/src/core/unit_tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/LocalBox_test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -Wl,-rpath,/usr/lib64/python3.9/site-packages/mpich/espressomd -Wl,--as-needed -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags CMakeFiles/LocalBox_test.dir/LocalBox_test.cpp.o -o LocalBox_test /usr/lib64/libboost_unit_test_framework.so ../EspressoCore.so ../../config/EspressoConfig.so /usr/lib64/mpich/lib/libboost_mpi.so /usr/lib64/libboost_serialization.so /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so -Wl,-rpath-link,/builddir/build/BUILD/espresso/mpich/src/pdbparser make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 50%] Built target LocalBox_test make -f src/core/unit_tests/CMakeFiles/None_test.dir/build.make src/core/unit_tests/CMakeFiles/None_test.dir/depend make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/core/unit_tests /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/core/unit_tests /builddir/build/BUILD/espresso/mpich/src/core/unit_tests/CMakeFiles/None_test.dir/DependInfo.cmake --color= Scanning dependencies of target None_test make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' make -f src/core/unit_tests/CMakeFiles/None_test.dir/build.make src/core/unit_tests/CMakeFiles/None_test.dir/build make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' [ 50%] Building CXX object src/core/unit_tests/CMakeFiles/None_test.dir/None_test.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/core/unit_tests && /usr/bin/g++ -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/script_interface -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/core/io/mpiio -I/builddir/build/BUILD/espresso/src/core/io/reader -I/builddir/build/BUILD/espresso/src/pdbparser/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/None_test.dir/None_test.cpp.o -c /builddir/build/BUILD/espresso/src/core/unit_tests/None_test.cpp [ 50%] Linking CXX executable None_test cd /builddir/build/BUILD/espresso/mpich/src/core/unit_tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/None_test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -Wl,-rpath,/usr/lib64/python3.9/site-packages/mpich/espressomd -Wl,--as-needed -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags CMakeFiles/None_test.dir/None_test.cpp.o -o None_test /usr/lib64/libboost_unit_test_framework.so ../../script_interface/EspressoScriptInterface.so ../shapes/Shapes.so ../cluster_analysis/core_cluster_analysis.so ../io/mpiio/mpiio.so ../io/reader/pdbreader.so ../EspressoCore.so ../../config/EspressoConfig.so /usr/lib64/mpich/lib/libboost_mpi.so /usr/lib64/libboost_serialization.so ../../pdbparser/pdbparser.so /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so -Wl,-rpath-link,/builddir/build/BUILD/espresso/mpich/src/core/io/writer:/usr/lib64/mpich/lib make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 50%] Built target None_test make -f src/core/unit_tests/CMakeFiles/RuntimeErrorCollector_test.dir/build.make src/core/unit_tests/CMakeFiles/RuntimeErrorCollector_test.dir/depend make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/core/unit_tests /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/core/unit_tests /builddir/build/BUILD/espresso/mpich/src/core/unit_tests/CMakeFiles/RuntimeErrorCollector_test.dir/DependInfo.cmake --color= Scanning dependencies of target RuntimeErrorCollector_test make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' make -f src/core/unit_tests/CMakeFiles/RuntimeErrorCollector_test.dir/build.make src/core/unit_tests/CMakeFiles/RuntimeErrorCollector_test.dir/build make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' [ 50%] Building CXX object src/core/unit_tests/CMakeFiles/RuntimeErrorCollector_test.dir/RuntimeErrorCollector_test.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/core/unit_tests && /usr/bin/g++ -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/utils/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/RuntimeErrorCollector_test.dir/RuntimeErrorCollector_test.cpp.o -c /builddir/build/BUILD/espresso/src/core/unit_tests/RuntimeErrorCollector_test.cpp [ 51%] Linking CXX executable RuntimeErrorCollector_test cd /builddir/build/BUILD/espresso/mpich/src/core/unit_tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/RuntimeErrorCollector_test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -Wl,-rpath,/usr/lib64/python3.9/site-packages/mpich/espressomd -Wl,--as-needed -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags CMakeFiles/RuntimeErrorCollector_test.dir/RuntimeErrorCollector_test.cpp.o -o RuntimeErrorCollector_test /usr/lib64/libboost_unit_test_framework.so ../EspressoCore.so /usr/lib64/mpich/lib/libboost_mpi.so ../../config/EspressoConfig.so /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so /usr/lib64/libboost_serialization.so -Wl,-rpath-link,/builddir/build/BUILD/espresso/mpich/src/pdbparser make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 51%] Built target RuntimeErrorCollector_test make -f src/core/unit_tests/CMakeFiles/grid_test.dir/build.make src/core/unit_tests/CMakeFiles/grid_test.dir/depend make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/core/unit_tests /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/core/unit_tests /builddir/build/BUILD/espresso/mpich/src/core/unit_tests/CMakeFiles/grid_test.dir/DependInfo.cmake --color= Scanning dependencies of target grid_test make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' make -f src/core/unit_tests/CMakeFiles/grid_test.dir/build.make src/core/unit_tests/CMakeFiles/grid_test.dir/build make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' [ 51%] Building CXX object src/core/unit_tests/CMakeFiles/grid_test.dir/grid_test.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/core/unit_tests && /usr/bin/g++ -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/utils/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/grid_test.dir/grid_test.cpp.o -c /builddir/build/BUILD/espresso/src/core/unit_tests/grid_test.cpp [ 51%] Linking CXX executable grid_test cd /builddir/build/BUILD/espresso/mpich/src/core/unit_tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/grid_test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -Wl,-rpath,/usr/lib64/python3.9/site-packages/mpich/espressomd -Wl,--as-needed -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags CMakeFiles/grid_test.dir/grid_test.cpp.o -o grid_test /usr/lib64/libboost_unit_test_framework.so ../EspressoCore.so ../../config/EspressoConfig.so /usr/lib64/mpich/lib/libboost_mpi.so /usr/lib64/libboost_serialization.so /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so -Wl,-rpath-link,/builddir/build/BUILD/espresso/mpich/src/pdbparser make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 51%] Built target grid_test make -f src/core/unit_tests/CMakeFiles/BoxGeometry_test.dir/build.make src/core/unit_tests/CMakeFiles/BoxGeometry_test.dir/depend make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/core/unit_tests /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/core/unit_tests /builddir/build/BUILD/espresso/mpich/src/core/unit_tests/CMakeFiles/BoxGeometry_test.dir/DependInfo.cmake --color= Scanning dependencies of target BoxGeometry_test make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' make -f src/core/unit_tests/CMakeFiles/BoxGeometry_test.dir/build.make src/core/unit_tests/CMakeFiles/BoxGeometry_test.dir/build make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' [ 51%] Building CXX object src/core/unit_tests/CMakeFiles/BoxGeometry_test.dir/BoxGeometry_test.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/core/unit_tests && /usr/bin/g++ -DR123_USE_MULHILO64_C99 -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -I/builddir/build/BUILD/espresso/src/utils/include -isystem /usr/include/mpich-x86_64 -isystem /builddir/build/BUILD/espresso/libs/Random123-1.09/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/BoxGeometry_test.dir/BoxGeometry_test.cpp.o -c /builddir/build/BUILD/espresso/src/core/unit_tests/BoxGeometry_test.cpp [ 52%] Linking CXX executable BoxGeometry_test cd /builddir/build/BUILD/espresso/mpich/src/core/unit_tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/BoxGeometry_test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -Wl,-rpath,/usr/lib64/python3.9/site-packages/mpich/espressomd -Wl,--as-needed -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags CMakeFiles/BoxGeometry_test.dir/BoxGeometry_test.cpp.o -o BoxGeometry_test /usr/lib64/libboost_unit_test_framework.so ../EspressoCore.so ../../config/EspressoConfig.so /usr/lib64/mpich/lib/libboost_mpi.so /usr/lib64/libboost_serialization.so /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so -Wl,-rpath-link,/builddir/build/BUILD/espresso/mpich/src/pdbparser make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 52%] Built target BoxGeometry_test make -f src/core/unit_tests/CMakeFiles/Wall_test.dir/build.make src/core/unit_tests/CMakeFiles/Wall_test.dir/depend make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/core/unit_tests /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/core/unit_tests /builddir/build/BUILD/espresso/mpich/src/core/unit_tests/CMakeFiles/Wall_test.dir/DependInfo.cmake --color= Scanning dependencies of target Wall_test make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' make -f src/core/unit_tests/CMakeFiles/Wall_test.dir/build.make src/core/unit_tests/CMakeFiles/Wall_test.dir/build make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' [ 53%] Building CXX object src/core/unit_tests/CMakeFiles/Wall_test.dir/Wall_test.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/core/unit_tests && /usr/bin/g++ -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -std=c++14 -o CMakeFiles/Wall_test.dir/Wall_test.cpp.o -c /builddir/build/BUILD/espresso/src/core/unit_tests/Wall_test.cpp [ 53%] Building CXX object src/core/unit_tests/CMakeFiles/Wall_test.dir/__/shapes/Wall.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/core/unit_tests && /usr/bin/g++ -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -std=c++14 -o CMakeFiles/Wall_test.dir/__/shapes/Wall.cpp.o -c /builddir/build/BUILD/espresso/src/core/shapes/Wall.cpp [ 53%] Linking CXX executable Wall_test cd /builddir/build/BUILD/espresso/mpich/src/core/unit_tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/Wall_test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -Wl,-rpath,/usr/lib64/python3.9/site-packages/mpich/espressomd CMakeFiles/Wall_test.dir/Wall_test.cpp.o CMakeFiles/Wall_test.dir/__/shapes/Wall.cpp.o -o Wall_test /usr/lib64/libboost_unit_test_framework.so ../../config/EspressoConfig.so make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 53%] Built target Wall_test make -f src/utils/tests/CMakeFiles/sendrecv_test.dir/build.make src/utils/tests/CMakeFiles/sendrecv_test.dir/depend make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/utils/tests /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/utils/tests /builddir/build/BUILD/espresso/mpich/src/utils/tests/CMakeFiles/sendrecv_test.dir/DependInfo.cmake --color= Scanning dependencies of target sendrecv_test make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' make -f src/utils/tests/CMakeFiles/sendrecv_test.dir/build.make src/utils/tests/CMakeFiles/sendrecv_test.dir/build make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' [ 53%] Building CXX object src/utils/tests/CMakeFiles/sendrecv_test.dir/sendrecv_test.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/utils/tests && /usr/bin/g++ -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -isystem /usr/include/mpich-x86_64 -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/sendrecv_test.dir/sendrecv_test.cpp.o -c /builddir/build/BUILD/espresso/src/utils/tests/sendrecv_test.cpp [ 53%] Linking CXX executable sendrecv_test cd /builddir/build/BUILD/espresso/mpich/src/utils/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/sendrecv_test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -Wl,-rpath,/usr/lib64/python3.9/site-packages/mpich/espressomd -Wl,--as-needed -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags CMakeFiles/sendrecv_test.dir/sendrecv_test.cpp.o -o sendrecv_test /usr/lib64/libboost_unit_test_framework.so /usr/lib64/mpich/lib/libboost_mpi.so ../../config/EspressoConfig.so /usr/lib64/libboost_serialization.so /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 53%] Built target sendrecv_test make -f src/utils/tests/CMakeFiles/all_gatherv_test.dir/build.make src/utils/tests/CMakeFiles/all_gatherv_test.dir/depend make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/utils/tests /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/utils/tests /builddir/build/BUILD/espresso/mpich/src/utils/tests/CMakeFiles/all_gatherv_test.dir/DependInfo.cmake --color= Scanning dependencies of target all_gatherv_test make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' make -f src/utils/tests/CMakeFiles/all_gatherv_test.dir/build.make src/utils/tests/CMakeFiles/all_gatherv_test.dir/build make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' [ 54%] Building CXX object src/utils/tests/CMakeFiles/all_gatherv_test.dir/all_gatherv_test.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/utils/tests && /usr/bin/g++ -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -isystem /usr/include/mpich-x86_64 -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/all_gatherv_test.dir/all_gatherv_test.cpp.o -c /builddir/build/BUILD/espresso/src/utils/tests/all_gatherv_test.cpp [ 54%] Linking CXX executable all_gatherv_test cd /builddir/build/BUILD/espresso/mpich/src/utils/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/all_gatherv_test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -Wl,-rpath,/usr/lib64/python3.9/site-packages/mpich/espressomd -Wl,--as-needed -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags CMakeFiles/all_gatherv_test.dir/all_gatherv_test.cpp.o -o all_gatherv_test /usr/lib64/libboost_unit_test_framework.so /usr/lib64/mpich/lib/libboost_mpi.so ../../config/EspressoConfig.so /usr/lib64/libboost_serialization.so /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 54%] Built target all_gatherv_test make -f src/utils/tests/CMakeFiles/gatherv_test.dir/build.make src/utils/tests/CMakeFiles/gatherv_test.dir/depend make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/utils/tests /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/utils/tests 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-fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/gatherv_test.dir/gatherv_test.cpp.o -c /builddir/build/BUILD/espresso/src/utils/tests/gatherv_test.cpp [ 54%] Linking CXX executable gatherv_test cd /builddir/build/BUILD/espresso/mpich/src/utils/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/gatherv_test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -Wl,-rpath,/usr/lib64/python3.9/site-packages/mpich/espressomd -Wl,--as-needed -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags CMakeFiles/gatherv_test.dir/gatherv_test.cpp.o -o gatherv_test /usr/lib64/libboost_unit_test_framework.so /usr/lib64/mpich/lib/libboost_mpi.so ../../config/EspressoConfig.so /usr/lib64/libboost_serialization.so /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 54%] Built target gatherv_test make -f src/utils/tests/CMakeFiles/all_compare_test.dir/build.make src/utils/tests/CMakeFiles/all_compare_test.dir/depend make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/utils/tests /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/utils/tests /builddir/build/BUILD/espresso/mpich/src/utils/tests/CMakeFiles/all_compare_test.dir/DependInfo.cmake --color= Scanning dependencies of target all_compare_test make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' make -f src/utils/tests/CMakeFiles/all_compare_test.dir/build.make src/utils/tests/CMakeFiles/all_compare_test.dir/build make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' [ 54%] Building CXX object src/utils/tests/CMakeFiles/all_compare_test.dir/all_compare_test.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/utils/tests && /usr/bin/g++ -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -isystem /usr/include/mpich-x86_64 -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/all_compare_test.dir/all_compare_test.cpp.o -c /builddir/build/BUILD/espresso/src/utils/tests/all_compare_test.cpp [ 54%] Linking CXX executable all_compare_test cd /builddir/build/BUILD/espresso/mpich/src/utils/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/all_compare_test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -Wl,-rpath,/usr/lib64/python3.9/site-packages/mpich/espressomd -Wl,--as-needed -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags CMakeFiles/all_compare_test.dir/all_compare_test.cpp.o -o all_compare_test /usr/lib64/libboost_unit_test_framework.so /usr/lib64/mpich/lib/libboost_mpi.so ../../config/EspressoConfig.so /usr/lib64/libboost_serialization.so /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 54%] Built target all_compare_test make -f src/utils/tests/CMakeFiles/gather_buffer_test.dir/build.make src/utils/tests/CMakeFiles/gather_buffer_test.dir/depend make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/utils/tests /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/utils/tests /builddir/build/BUILD/espresso/mpich/src/utils/tests/CMakeFiles/gather_buffer_test.dir/DependInfo.cmake --color= Scanning dependencies of target gather_buffer_test make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' make -f src/utils/tests/CMakeFiles/gather_buffer_test.dir/build.make src/utils/tests/CMakeFiles/gather_buffer_test.dir/build make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' [ 54%] Building CXX object src/utils/tests/CMakeFiles/gather_buffer_test.dir/gather_buffer_test.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/utils/tests && /usr/bin/g++ -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -isystem /usr/include/mpich-x86_64 -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/gather_buffer_test.dir/gather_buffer_test.cpp.o -c /builddir/build/BUILD/espresso/src/utils/tests/gather_buffer_test.cpp [ 54%] Linking CXX executable gather_buffer_test cd /builddir/build/BUILD/espresso/mpich/src/utils/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/gather_buffer_test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -Wl,-rpath,/usr/lib64/python3.9/site-packages/mpich/espressomd -Wl,--as-needed -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags CMakeFiles/gather_buffer_test.dir/gather_buffer_test.cpp.o -o gather_buffer_test /usr/lib64/libboost_unit_test_framework.so /usr/lib64/mpich/lib/libboost_mpi.so ../../config/EspressoConfig.so /usr/lib64/libboost_serialization.so /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 54%] Built target gather_buffer_test make -f src/utils/tests/CMakeFiles/uniform_test.dir/build.make src/utils/tests/CMakeFiles/uniform_test.dir/depend make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/utils/tests /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/utils/tests /builddir/build/BUILD/espresso/mpich/src/utils/tests/CMakeFiles/uniform_test.dir/DependInfo.cmake --color= Scanning dependencies of target uniform_test make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' make -f src/utils/tests/CMakeFiles/uniform_test.dir/build.make src/utils/tests/CMakeFiles/uniform_test.dir/build make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' [ 54%] Building CXX object src/utils/tests/CMakeFiles/uniform_test.dir/uniform_test.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/utils/tests && /usr/bin/g++ -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -std=c++14 -o CMakeFiles/uniform_test.dir/uniform_test.cpp.o -c /builddir/build/BUILD/espresso/src/utils/tests/uniform_test.cpp [ 56%] Linking CXX executable uniform_test cd /builddir/build/BUILD/espresso/mpich/src/utils/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/uniform_test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -Wl,-rpath,/usr/lib64/python3.9/site-packages/mpich/espressomd CMakeFiles/uniform_test.dir/uniform_test.cpp.o -o uniform_test /usr/lib64/libboost_unit_test_framework.so ../../config/EspressoConfig.so make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 56%] Built target uniform_test make -f src/utils/tests/CMakeFiles/coordinate_transformation_test.dir/build.make src/utils/tests/CMakeFiles/coordinate_transformation_test.dir/depend make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/utils/tests /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/utils/tests /builddir/build/BUILD/espresso/mpich/src/utils/tests/CMakeFiles/coordinate_transformation_test.dir/DependInfo.cmake --color= Scanning dependencies of target coordinate_transformation_test make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' make -f src/utils/tests/CMakeFiles/coordinate_transformation_test.dir/build.make src/utils/tests/CMakeFiles/coordinate_transformation_test.dir/build make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' [ 56%] Building CXX object src/utils/tests/CMakeFiles/coordinate_transformation_test.dir/coordinate_transformation.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/utils/tests && /usr/bin/g++ -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -std=c++14 -o CMakeFiles/coordinate_transformation_test.dir/coordinate_transformation.cpp.o -c /builddir/build/BUILD/espresso/src/utils/tests/coordinate_transformation.cpp [ 56%] Linking CXX executable coordinate_transformation_test cd /builddir/build/BUILD/espresso/mpich/src/utils/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/coordinate_transformation_test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -Wl,-rpath,/usr/lib64/python3.9/site-packages/mpich/espressomd CMakeFiles/coordinate_transformation_test.dir/coordinate_transformation.cpp.o -o coordinate_transformation_test /usr/lib64/libboost_unit_test_framework.so ../../config/EspressoConfig.so make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 56%] Built target coordinate_transformation_test make -f src/utils/tests/CMakeFiles/sampling_test.dir/build.make src/utils/tests/CMakeFiles/sampling_test.dir/depend make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/utils/tests /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/utils/tests /builddir/build/BUILD/espresso/mpich/src/utils/tests/CMakeFiles/sampling_test.dir/DependInfo.cmake --color= Scanning dependencies of target sampling_test make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' make -f src/utils/tests/CMakeFiles/sampling_test.dir/build.make src/utils/tests/CMakeFiles/sampling_test.dir/build make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' [ 56%] Building CXX object src/utils/tests/CMakeFiles/sampling_test.dir/sampling_test.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/utils/tests && /usr/bin/g++ -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -std=c++14 -o CMakeFiles/sampling_test.dir/sampling_test.cpp.o -c /builddir/build/BUILD/espresso/src/utils/tests/sampling_test.cpp [ 56%] Linking CXX executable sampling_test cd /builddir/build/BUILD/espresso/mpich/src/utils/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/sampling_test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -Wl,-rpath,/usr/lib64/python3.9/site-packages/mpich/espressomd CMakeFiles/sampling_test.dir/sampling_test.cpp.o -o sampling_test /usr/lib64/libboost_unit_test_framework.so ../../config/EspressoConfig.so make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 56%] Built target sampling_test make -f src/utils/tests/CMakeFiles/make_lin_space_test.dir/build.make src/utils/tests/CMakeFiles/make_lin_space_test.dir/depend make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/utils/tests /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/utils/tests /builddir/build/BUILD/espresso/mpich/src/utils/tests/CMakeFiles/make_lin_space_test.dir/DependInfo.cmake --color= Scanning dependencies of target make_lin_space_test make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' make -f src/utils/tests/CMakeFiles/make_lin_space_test.dir/build.make src/utils/tests/CMakeFiles/make_lin_space_test.dir/build make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' [ 56%] Building CXX object src/utils/tests/CMakeFiles/make_lin_space_test.dir/make_lin_space_test.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/utils/tests && /usr/bin/g++ -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -std=c++14 -o CMakeFiles/make_lin_space_test.dir/make_lin_space_test.cpp.o -c /builddir/build/BUILD/espresso/src/utils/tests/make_lin_space_test.cpp [ 56%] Linking CXX executable make_lin_space_test cd /builddir/build/BUILD/espresso/mpich/src/utils/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/make_lin_space_test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -Wl,-rpath,/usr/lib64/python3.9/site-packages/mpich/espressomd CMakeFiles/make_lin_space_test.dir/make_lin_space_test.cpp.o -o make_lin_space_test /usr/lib64/libboost_unit_test_framework.so ../../config/EspressoConfig.so make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 56%] Built target make_lin_space_test make -f src/utils/tests/CMakeFiles/for_each_pair_test.dir/build.make src/utils/tests/CMakeFiles/for_each_pair_test.dir/depend make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/utils/tests /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/utils/tests /builddir/build/BUILD/espresso/mpich/src/utils/tests/CMakeFiles/for_each_pair_test.dir/DependInfo.cmake --color= Scanning dependencies of target for_each_pair_test make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' make -f src/utils/tests/CMakeFiles/for_each_pair_test.dir/build.make src/utils/tests/CMakeFiles/for_each_pair_test.dir/build make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' [ 56%] Building CXX object src/utils/tests/CMakeFiles/for_each_pair_test.dir/for_each_pair_test.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/utils/tests && /usr/bin/g++ -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -std=c++14 -o CMakeFiles/for_each_pair_test.dir/for_each_pair_test.cpp.o -c /builddir/build/BUILD/espresso/src/utils/tests/for_each_pair_test.cpp [ 57%] Linking CXX executable for_each_pair_test cd /builddir/build/BUILD/espresso/mpich/src/utils/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/for_each_pair_test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -Wl,-rpath,/usr/lib64/python3.9/site-packages/mpich/espressomd CMakeFiles/for_each_pair_test.dir/for_each_pair_test.cpp.o -o for_each_pair_test /usr/lib64/libboost_unit_test_framework.so ../../config/EspressoConfig.so make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 57%] Built target for_each_pair_test make -f src/utils/tests/CMakeFiles/RunningAverage_test.dir/build.make src/utils/tests/CMakeFiles/RunningAverage_test.dir/depend make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/utils/tests /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/utils/tests /builddir/build/BUILD/espresso/mpich/src/utils/tests/CMakeFiles/RunningAverage_test.dir/DependInfo.cmake --color= Scanning dependencies of target RunningAverage_test make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' make -f src/utils/tests/CMakeFiles/RunningAverage_test.dir/build.make src/utils/tests/CMakeFiles/RunningAverage_test.dir/build make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' [ 57%] Building CXX object src/utils/tests/CMakeFiles/RunningAverage_test.dir/RunningAverage_test.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/utils/tests && /usr/bin/g++ -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -std=c++14 -o CMakeFiles/RunningAverage_test.dir/RunningAverage_test.cpp.o -c /builddir/build/BUILD/espresso/src/utils/tests/RunningAverage_test.cpp [ 57%] Linking CXX executable RunningAverage_test cd /builddir/build/BUILD/espresso/mpich/src/utils/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/RunningAverage_test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -Wl,-rpath,/usr/lib64/python3.9/site-packages/mpich/espressomd CMakeFiles/RunningAverage_test.dir/RunningAverage_test.cpp.o -o RunningAverage_test /usr/lib64/libboost_unit_test_framework.so ../../config/EspressoConfig.so make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 57%] Built target RunningAverage_test make -f src/utils/tests/CMakeFiles/strcat_alloc.dir/build.make src/utils/tests/CMakeFiles/strcat_alloc.dir/depend make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/utils/tests /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/utils/tests /builddir/build/BUILD/espresso/mpich/src/utils/tests/CMakeFiles/strcat_alloc.dir/DependInfo.cmake --color= Scanning dependencies of target strcat_alloc make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' make -f src/utils/tests/CMakeFiles/strcat_alloc.dir/build.make src/utils/tests/CMakeFiles/strcat_alloc.dir/build make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' [ 57%] Building CXX object src/utils/tests/CMakeFiles/strcat_alloc.dir/strcat_alloc_test.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/utils/tests && /usr/bin/g++ -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -std=c++14 -o CMakeFiles/strcat_alloc.dir/strcat_alloc_test.cpp.o -c /builddir/build/BUILD/espresso/src/utils/tests/strcat_alloc_test.cpp [ 57%] Linking CXX executable strcat_alloc cd /builddir/build/BUILD/espresso/mpich/src/utils/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/strcat_alloc.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -Wl,-rpath,/usr/lib64/python3.9/site-packages/mpich/espressomd CMakeFiles/strcat_alloc.dir/strcat_alloc_test.cpp.o -o strcat_alloc /usr/lib64/libboost_unit_test_framework.so ../../config/EspressoConfig.so make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 57%] Built target strcat_alloc make -f src/utils/tests/CMakeFiles/accumulator.dir/build.make src/utils/tests/CMakeFiles/accumulator.dir/depend make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/utils/tests /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/utils/tests /builddir/build/BUILD/espresso/mpich/src/utils/tests/CMakeFiles/accumulator.dir/DependInfo.cmake --color= Scanning dependencies of target accumulator make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' make -f src/utils/tests/CMakeFiles/accumulator.dir/build.make src/utils/tests/CMakeFiles/accumulator.dir/build make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' [ 57%] Building CXX object src/utils/tests/CMakeFiles/accumulator.dir/accumulator.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/utils/tests && /usr/bin/g++ -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -std=c++14 -o CMakeFiles/accumulator.dir/accumulator.cpp.o -c /builddir/build/BUILD/espresso/src/utils/tests/accumulator.cpp [ 57%] Linking CXX executable accumulator cd /builddir/build/BUILD/espresso/mpich/src/utils/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/accumulator.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -Wl,-rpath,/usr/lib64/python3.9/site-packages/mpich/espressomd CMakeFiles/accumulator.dir/accumulator.cpp.o -o accumulator /usr/lib64/libboost_unit_test_framework.so ../../config/EspressoConfig.so make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 57%] Built target accumulator make -f src/utils/tests/CMakeFiles/histogram.dir/build.make src/utils/tests/CMakeFiles/histogram.dir/depend make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/utils/tests /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/utils/tests /builddir/build/BUILD/espresso/mpich/src/utils/tests/CMakeFiles/histogram.dir/DependInfo.cmake --color= Scanning dependencies of target histogram make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' make -f src/utils/tests/CMakeFiles/histogram.dir/build.make src/utils/tests/CMakeFiles/histogram.dir/build make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' [ 57%] Building CXX object src/utils/tests/CMakeFiles/histogram.dir/histogram.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/utils/tests && /usr/bin/g++ -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -std=c++14 -o CMakeFiles/histogram.dir/histogram.cpp.o -c /builddir/build/BUILD/espresso/src/utils/tests/histogram.cpp [ 57%] Linking CXX executable histogram cd /builddir/build/BUILD/espresso/mpich/src/utils/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/histogram.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -Wl,-rpath,/usr/lib64/python3.9/site-packages/mpich/espressomd CMakeFiles/histogram.dir/histogram.cpp.o -o histogram /usr/lib64/libboost_unit_test_framework.so ../../config/EspressoConfig.so make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 57%] Built target histogram make -f src/utils/tests/CMakeFiles/keys_test.dir/build.make src/utils/tests/CMakeFiles/keys_test.dir/depend make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/utils/tests /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/utils/tests /builddir/build/BUILD/espresso/mpich/src/utils/tests/CMakeFiles/keys_test.dir/DependInfo.cmake --color= Scanning dependencies of target keys_test make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' make -f src/utils/tests/CMakeFiles/keys_test.dir/build.make src/utils/tests/CMakeFiles/keys_test.dir/build make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' [ 57%] Building CXX object src/utils/tests/CMakeFiles/keys_test.dir/keys_test.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/utils/tests && /usr/bin/g++ -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -std=c++14 -o CMakeFiles/keys_test.dir/keys_test.cpp.o -c /builddir/build/BUILD/espresso/src/utils/tests/keys_test.cpp [ 57%] Linking CXX executable keys_test cd /builddir/build/BUILD/espresso/mpich/src/utils/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/keys_test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -Wl,-rpath,/usr/lib64/python3.9/site-packages/mpich/espressomd CMakeFiles/keys_test.dir/keys_test.cpp.o -o keys_test /usr/lib64/libboost_unit_test_framework.so ../../config/EspressoConfig.so make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 57%] Built target keys_test make -f src/utils/tests/CMakeFiles/rotation_matrix_test.dir/build.make src/utils/tests/CMakeFiles/rotation_matrix_test.dir/depend make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/utils/tests /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/utils/tests /builddir/build/BUILD/espresso/mpich/src/utils/tests/CMakeFiles/rotation_matrix_test.dir/DependInfo.cmake --color= Scanning dependencies of target rotation_matrix_test make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' make -f src/utils/tests/CMakeFiles/rotation_matrix_test.dir/build.make src/utils/tests/CMakeFiles/rotation_matrix_test.dir/build make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' [ 57%] Building CXX object src/utils/tests/CMakeFiles/rotation_matrix_test.dir/rotation_matrix_test.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/utils/tests && /usr/bin/g++ -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -std=c++14 -o CMakeFiles/rotation_matrix_test.dir/rotation_matrix_test.cpp.o -c /builddir/build/BUILD/espresso/src/utils/tests/rotation_matrix_test.cpp [ 57%] Linking CXX executable rotation_matrix_test cd /builddir/build/BUILD/espresso/mpich/src/utils/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/rotation_matrix_test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -Wl,-rpath,/usr/lib64/python3.9/site-packages/mpich/espressomd CMakeFiles/rotation_matrix_test.dir/rotation_matrix_test.cpp.o -o rotation_matrix_test /usr/lib64/libboost_unit_test_framework.so ../../config/EspressoConfig.so make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 57%] Built target rotation_matrix_test make -f src/utils/tests/CMakeFiles/SkipIterator_test.dir/build.make src/utils/tests/CMakeFiles/SkipIterator_test.dir/depend make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/utils/tests /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/utils/tests /builddir/build/BUILD/espresso/mpich/src/utils/tests/CMakeFiles/SkipIterator_test.dir/DependInfo.cmake --color= Scanning dependencies of target SkipIterator_test make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' make -f src/utils/tests/CMakeFiles/SkipIterator_test.dir/build.make src/utils/tests/CMakeFiles/SkipIterator_test.dir/build make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' [ 57%] Building CXX object src/utils/tests/CMakeFiles/SkipIterator_test.dir/SkipIterator_test.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/utils/tests && /usr/bin/g++ -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -std=c++14 -o CMakeFiles/SkipIterator_test.dir/SkipIterator_test.cpp.o -c /builddir/build/BUILD/espresso/src/utils/tests/SkipIterator_test.cpp [ 57%] Linking CXX executable SkipIterator_test cd /builddir/build/BUILD/espresso/mpich/src/utils/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/SkipIterator_test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -Wl,-rpath,/usr/lib64/python3.9/site-packages/mpich/espressomd CMakeFiles/SkipIterator_test.dir/SkipIterator_test.cpp.o -o SkipIterator_test /usr/lib64/libboost_unit_test_framework.so ../../config/EspressoConfig.so make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 57%] Built target SkipIterator_test make -f src/utils/tests/CMakeFiles/Factory_test.dir/build.make src/utils/tests/CMakeFiles/Factory_test.dir/depend make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/utils/tests /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/utils/tests /builddir/build/BUILD/espresso/mpich/src/utils/tests/CMakeFiles/Factory_test.dir/DependInfo.cmake --color= Scanning dependencies of target Factory_test make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' make -f src/utils/tests/CMakeFiles/Factory_test.dir/build.make src/utils/tests/CMakeFiles/Factory_test.dir/build make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' [ 57%] Building CXX object src/utils/tests/CMakeFiles/Factory_test.dir/Factory_test.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/utils/tests && /usr/bin/g++ -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -std=c++14 -o CMakeFiles/Factory_test.dir/Factory_test.cpp.o -c /builddir/build/BUILD/espresso/src/utils/tests/Factory_test.cpp [ 57%] Linking CXX executable Factory_test cd /builddir/build/BUILD/espresso/mpich/src/utils/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/Factory_test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -Wl,-rpath,/usr/lib64/python3.9/site-packages/mpich/espressomd CMakeFiles/Factory_test.dir/Factory_test.cpp.o -o Factory_test /usr/lib64/libboost_unit_test_framework.so ../../config/EspressoConfig.so make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 57%] Built target Factory_test make -f src/utils/tests/CMakeFiles/ravel_index.dir/build.make src/utils/tests/CMakeFiles/ravel_index.dir/depend make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/utils/tests /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/utils/tests 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-mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -std=c++14 -o CMakeFiles/ravel_index.dir/index_test.cpp.o -c /builddir/build/BUILD/espresso/src/utils/tests/index_test.cpp [ 58%] Linking CXX executable ravel_index cd /builddir/build/BUILD/espresso/mpich/src/utils/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/ravel_index.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -Wl,-rpath,/usr/lib64/python3.9/site-packages/mpich/espressomd CMakeFiles/ravel_index.dir/index_test.cpp.o -o ravel_index /usr/lib64/libboost_unit_test_framework.so ../../config/EspressoConfig.so make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 58%] Built target ravel_index make -f src/utils/tests/CMakeFiles/make_function_test.dir/build.make src/utils/tests/CMakeFiles/make_function_test.dir/depend make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/utils/tests /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/utils/tests /builddir/build/BUILD/espresso/mpich/src/utils/tests/CMakeFiles/make_function_test.dir/DependInfo.cmake --color= Scanning dependencies of target make_function_test make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' make -f src/utils/tests/CMakeFiles/make_function_test.dir/build.make src/utils/tests/CMakeFiles/make_function_test.dir/build make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' [ 58%] Building CXX object src/utils/tests/CMakeFiles/make_function_test.dir/make_function_test.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/utils/tests && /usr/bin/g++ -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -std=c++14 -o CMakeFiles/make_function_test.dir/make_function_test.cpp.o -c /builddir/build/BUILD/espresso/src/utils/tests/make_function_test.cpp [ 58%] Linking CXX executable make_function_test cd /builddir/build/BUILD/espresso/mpich/src/utils/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/make_function_test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -Wl,-rpath,/usr/lib64/python3.9/site-packages/mpich/espressomd CMakeFiles/make_function_test.dir/make_function_test.cpp.o -o make_function_test /usr/lib64/libboost_unit_test_framework.so ../../config/EspressoConfig.so make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 58%] Built target make_function_test make -f src/utils/tests/CMakeFiles/Span_test.dir/build.make src/utils/tests/CMakeFiles/Span_test.dir/depend make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/utils/tests /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/utils/tests /builddir/build/BUILD/espresso/mpich/src/utils/tests/CMakeFiles/Span_test.dir/DependInfo.cmake --color= Scanning dependencies of target Span_test make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' make -f src/utils/tests/CMakeFiles/Span_test.dir/build.make src/utils/tests/CMakeFiles/Span_test.dir/build make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' [ 58%] Building CXX object src/utils/tests/CMakeFiles/Span_test.dir/Span_test.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/utils/tests && /usr/bin/g++ -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -std=c++14 -o CMakeFiles/Span_test.dir/Span_test.cpp.o -c /builddir/build/BUILD/espresso/src/utils/tests/Span_test.cpp [ 59%] Linking CXX executable Span_test cd /builddir/build/BUILD/espresso/mpich/src/utils/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/Span_test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -Wl,-rpath,/usr/lib64/python3.9/site-packages/mpich/espressomd CMakeFiles/Span_test.dir/Span_test.cpp.o -o Span_test /usr/lib64/libboost_unit_test_framework.so ../../config/EspressoConfig.so make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 59%] Built target Span_test make -f src/utils/tests/CMakeFiles/NumeratedContainer_test.dir/build.make src/utils/tests/CMakeFiles/NumeratedContainer_test.dir/depend make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/utils/tests /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/utils/tests /builddir/build/BUILD/espresso/mpich/src/utils/tests/CMakeFiles/NumeratedContainer_test.dir/DependInfo.cmake --color= Scanning dependencies of target NumeratedContainer_test make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' make -f src/utils/tests/CMakeFiles/NumeratedContainer_test.dir/build.make src/utils/tests/CMakeFiles/NumeratedContainer_test.dir/build make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' [ 60%] Building CXX object src/utils/tests/CMakeFiles/NumeratedContainer_test.dir/NumeratedContainer_test.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/utils/tests && /usr/bin/g++ -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -std=c++14 -o CMakeFiles/NumeratedContainer_test.dir/NumeratedContainer_test.cpp.o -c /builddir/build/BUILD/espresso/src/utils/tests/NumeratedContainer_test.cpp [ 60%] Linking CXX executable NumeratedContainer_test cd /builddir/build/BUILD/espresso/mpich/src/utils/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/NumeratedContainer_test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -Wl,-rpath,/usr/lib64/python3.9/site-packages/mpich/espressomd CMakeFiles/NumeratedContainer_test.dir/NumeratedContainer_test.cpp.o -o NumeratedContainer_test /usr/lib64/libboost_unit_test_framework.so ../../config/EspressoConfig.so make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 60%] Built target NumeratedContainer_test make -f src/utils/tests/CMakeFiles/scatter_buffer_test.dir/build.make src/utils/tests/CMakeFiles/scatter_buffer_test.dir/depend make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/utils/tests /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/utils/tests /builddir/build/BUILD/espresso/mpich/src/utils/tests/CMakeFiles/scatter_buffer_test.dir/DependInfo.cmake --color= 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-fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++14 -o CMakeFiles/scatter_buffer_test.dir/scatter_buffer_test.cpp.o -c /builddir/build/BUILD/espresso/src/utils/tests/scatter_buffer_test.cpp [ 61%] Linking CXX executable scatter_buffer_test cd /builddir/build/BUILD/espresso/mpich/src/utils/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/scatter_buffer_test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -Wl,-rpath,/usr/lib64/python3.9/site-packages/mpich/espressomd -Wl,--as-needed -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags CMakeFiles/scatter_buffer_test.dir/scatter_buffer_test.cpp.o -o scatter_buffer_test /usr/lib64/libboost_unit_test_framework.so /usr/lib64/mpich/lib/libboost_mpi.so ../../config/EspressoConfig.so /usr/lib64/libboost_serialization.so /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 61%] Built target scatter_buffer_test make -f src/utils/tests/CMakeFiles/Counter_test.dir/build.make src/utils/tests/CMakeFiles/Counter_test.dir/depend make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/utils/tests /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/utils/tests /builddir/build/BUILD/espresso/mpich/src/utils/tests/CMakeFiles/Counter_test.dir/DependInfo.cmake --color= Scanning dependencies of target Counter_test make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' make -f src/utils/tests/CMakeFiles/Counter_test.dir/build.make src/utils/tests/CMakeFiles/Counter_test.dir/build make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' [ 61%] Building CXX object src/utils/tests/CMakeFiles/Counter_test.dir/Counter_test.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/utils/tests && /usr/bin/g++ -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -std=c++14 -o CMakeFiles/Counter_test.dir/Counter_test.cpp.o -c /builddir/build/BUILD/espresso/src/utils/tests/Counter_test.cpp [ 61%] Linking CXX executable Counter_test cd /builddir/build/BUILD/espresso/mpich/src/utils/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/Counter_test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -Wl,-rpath,/usr/lib64/python3.9/site-packages/mpich/espressomd CMakeFiles/Counter_test.dir/Counter_test.cpp.o -o Counter_test /usr/lib64/libboost_unit_test_framework.so ../../config/EspressoConfig.so make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 61%] Built target Counter_test make -f src/utils/tests/CMakeFiles/raster_test.dir/build.make src/utils/tests/CMakeFiles/raster_test.dir/depend make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/utils/tests /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/utils/tests /builddir/build/BUILD/espresso/mpich/src/utils/tests/CMakeFiles/raster_test.dir/DependInfo.cmake --color= Scanning dependencies of target raster_test make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' make -f src/utils/tests/CMakeFiles/raster_test.dir/build.make src/utils/tests/CMakeFiles/raster_test.dir/build make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' [ 61%] Building CXX object src/utils/tests/CMakeFiles/raster_test.dir/raster_test.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/utils/tests && /usr/bin/g++ -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -std=c++14 -o CMakeFiles/raster_test.dir/raster_test.cpp.o -c /builddir/build/BUILD/espresso/src/utils/tests/raster_test.cpp [ 61%] Linking CXX executable raster_test cd /builddir/build/BUILD/espresso/mpich/src/utils/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/raster_test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -Wl,-rpath,/usr/lib64/python3.9/site-packages/mpich/espressomd CMakeFiles/raster_test.dir/raster_test.cpp.o -o raster_test /usr/lib64/libboost_unit_test_framework.so ../../config/EspressoConfig.so make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 61%] Built target raster_test make -f src/utils/tests/CMakeFiles/Vector_test.dir/build.make src/utils/tests/CMakeFiles/Vector_test.dir/depend make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/utils/tests /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/utils/tests /builddir/build/BUILD/espresso/mpich/src/utils/tests/CMakeFiles/Vector_test.dir/DependInfo.cmake --color= Scanning dependencies of target Vector_test make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' make -f src/utils/tests/CMakeFiles/Vector_test.dir/build.make src/utils/tests/CMakeFiles/Vector_test.dir/build make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' [ 61%] Building CXX object src/utils/tests/CMakeFiles/Vector_test.dir/Vector_test.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/utils/tests && /usr/bin/g++ -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -std=c++14 -o CMakeFiles/Vector_test.dir/Vector_test.cpp.o -c /builddir/build/BUILD/espresso/src/utils/tests/Vector_test.cpp [ 61%] Linking CXX executable Vector_test cd /builddir/build/BUILD/espresso/mpich/src/utils/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/Vector_test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -Wl,-rpath,/usr/lib64/python3.9/site-packages/mpich/espressomd CMakeFiles/Vector_test.dir/Vector_test.cpp.o -o Vector_test /usr/lib64/libboost_unit_test_framework.so ../../config/EspressoConfig.so make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 61%] Built target Vector_test make -f src/utils/tests/CMakeFiles/abs_test.dir/build.make src/utils/tests/CMakeFiles/abs_test.dir/depend make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/utils/tests /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/utils/tests /builddir/build/BUILD/espresso/mpich/src/utils/tests/CMakeFiles/abs_test.dir/DependInfo.cmake --color= Scanning dependencies of target abs_test make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' make -f src/utils/tests/CMakeFiles/abs_test.dir/build.make src/utils/tests/CMakeFiles/abs_test.dir/build make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' [ 61%] Building CXX object src/utils/tests/CMakeFiles/abs_test.dir/abs_test.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/utils/tests && /usr/bin/g++ -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -std=c++14 -o CMakeFiles/abs_test.dir/abs_test.cpp.o -c /builddir/build/BUILD/espresso/src/utils/tests/abs_test.cpp [ 62%] Linking CXX executable abs_test cd /builddir/build/BUILD/espresso/mpich/src/utils/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/abs_test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -Wl,-rpath,/usr/lib64/python3.9/site-packages/mpich/espressomd CMakeFiles/abs_test.dir/abs_test.cpp.o -o abs_test /usr/lib64/libboost_unit_test_framework.so ../../config/EspressoConfig.so make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 62%] Built target abs_test make -f src/utils/tests/CMakeFiles/int_pow.dir/build.make src/utils/tests/CMakeFiles/int_pow.dir/depend make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/utils/tests /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/utils/tests /builddir/build/BUILD/espresso/mpich/src/utils/tests/CMakeFiles/int_pow.dir/DependInfo.cmake --color= Scanning dependencies of target int_pow make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' make -f src/utils/tests/CMakeFiles/int_pow.dir/build.make src/utils/tests/CMakeFiles/int_pow.dir/build make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' [ 63%] Building CXX object src/utils/tests/CMakeFiles/int_pow.dir/int_pow_test.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/utils/tests && /usr/bin/g++ -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -std=c++14 -o CMakeFiles/int_pow.dir/int_pow_test.cpp.o -c /builddir/build/BUILD/espresso/src/utils/tests/int_pow_test.cpp [ 63%] Linking CXX executable int_pow cd /builddir/build/BUILD/espresso/mpich/src/utils/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/int_pow.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -Wl,-rpath,/usr/lib64/python3.9/site-packages/mpich/espressomd CMakeFiles/int_pow.dir/int_pow_test.cpp.o -o int_pow /usr/lib64/libboost_unit_test_framework.so ../../config/EspressoConfig.so make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 63%] Built target int_pow make -f src/utils/tests/CMakeFiles/sgn.dir/build.make src/utils/tests/CMakeFiles/sgn.dir/depend make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/utils/tests /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/utils/tests /builddir/build/BUILD/espresso/mpich/src/utils/tests/CMakeFiles/sgn.dir/DependInfo.cmake --color= Scanning dependencies of target sgn make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' make -f src/utils/tests/CMakeFiles/sgn.dir/build.make src/utils/tests/CMakeFiles/sgn.dir/build make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' [ 63%] Building CXX object src/utils/tests/CMakeFiles/sgn.dir/sgn_test.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/utils/tests && /usr/bin/g++ -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -std=c++14 -o CMakeFiles/sgn.dir/sgn_test.cpp.o -c /builddir/build/BUILD/espresso/src/utils/tests/sgn_test.cpp [ 64%] Linking CXX executable sgn cd /builddir/build/BUILD/espresso/mpich/src/utils/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/sgn.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -Wl,-rpath,/usr/lib64/python3.9/site-packages/mpich/espressomd CMakeFiles/sgn.dir/sgn_test.cpp.o -o sgn /usr/lib64/libboost_unit_test_framework.so ../../config/EspressoConfig.so make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 64%] Built target sgn make -f src/utils/tests/CMakeFiles/AS_erfc_part.dir/build.make src/utils/tests/CMakeFiles/AS_erfc_part.dir/depend make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/utils/tests /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/utils/tests /builddir/build/BUILD/espresso/mpich/src/utils/tests/CMakeFiles/AS_erfc_part.dir/DependInfo.cmake --color= Scanning dependencies of target AS_erfc_part make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' make -f src/utils/tests/CMakeFiles/AS_erfc_part.dir/build.make src/utils/tests/CMakeFiles/AS_erfc_part.dir/build make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' [ 64%] Building CXX object src/utils/tests/CMakeFiles/AS_erfc_part.dir/AS_erfc_part_test.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/utils/tests && /usr/bin/g++ -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -std=c++14 -o CMakeFiles/AS_erfc_part.dir/AS_erfc_part_test.cpp.o -c /builddir/build/BUILD/espresso/src/utils/tests/AS_erfc_part_test.cpp [ 64%] Linking CXX executable AS_erfc_part cd /builddir/build/BUILD/espresso/mpich/src/utils/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/AS_erfc_part.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -Wl,-rpath,/usr/lib64/python3.9/site-packages/mpich/espressomd CMakeFiles/AS_erfc_part.dir/AS_erfc_part_test.cpp.o -o AS_erfc_part /usr/lib64/libboost_unit_test_framework.so ../../config/EspressoConfig.so make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 64%] Built target AS_erfc_part make -f src/utils/tests/CMakeFiles/vec_rotate.dir/build.make src/utils/tests/CMakeFiles/vec_rotate.dir/depend make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/utils/tests /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/utils/tests /builddir/build/BUILD/espresso/mpich/src/utils/tests/CMakeFiles/vec_rotate.dir/DependInfo.cmake --color= Scanning dependencies of target vec_rotate make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' make -f src/utils/tests/CMakeFiles/vec_rotate.dir/build.make src/utils/tests/CMakeFiles/vec_rotate.dir/build make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' [ 64%] Building CXX object src/utils/tests/CMakeFiles/vec_rotate.dir/vec_rotate_test.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/utils/tests && /usr/bin/g++ -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -std=c++14 -o CMakeFiles/vec_rotate.dir/vec_rotate_test.cpp.o -c 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make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 64%] Built target vec_rotate make -f src/utils/tests/CMakeFiles/List_test.dir/build.make src/utils/tests/CMakeFiles/List_test.dir/depend make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/utils/tests /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/utils/tests /builddir/build/BUILD/espresso/mpich/src/utils/tests/CMakeFiles/List_test.dir/DependInfo.cmake --color= Scanning dependencies of target List_test make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' make -f src/utils/tests/CMakeFiles/List_test.dir/build.make src/utils/tests/CMakeFiles/List_test.dir/build make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' [ 64%] Building CXX object src/utils/tests/CMakeFiles/List_test.dir/List_test.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/utils/tests && /usr/bin/g++ -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -std=c++14 -o CMakeFiles/List_test.dir/List_test.cpp.o -c /builddir/build/BUILD/espresso/src/utils/tests/List_test.cpp [ 64%] Linking CXX executable List_test cd /builddir/build/BUILD/espresso/mpich/src/utils/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/List_test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -Wl,-rpath,/usr/lib64/python3.9/site-packages/mpich/espressomd CMakeFiles/List_test.dir/List_test.cpp.o -o List_test /usr/lib64/libboost_unit_test_framework.so /usr/lib64/libboost_serialization.so ../../config/EspressoConfig.so make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 64%] Built target List_test make -f src/utils/tests/CMakeFiles/sinc.dir/build.make src/utils/tests/CMakeFiles/sinc.dir/depend make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/utils/tests /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/utils/tests /builddir/build/BUILD/espresso/mpich/src/utils/tests/CMakeFiles/sinc.dir/DependInfo.cmake --color= Scanning dependencies of target sinc make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' make -f src/utils/tests/CMakeFiles/sinc.dir/build.make src/utils/tests/CMakeFiles/sinc.dir/build make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' [ 64%] Building CXX object src/utils/tests/CMakeFiles/sinc.dir/sinc_test.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/utils/tests && /usr/bin/g++ -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -std=c++14 -o CMakeFiles/sinc.dir/sinc_test.cpp.o -c /builddir/build/BUILD/espresso/src/utils/tests/sinc_test.cpp [ 64%] Linking CXX executable sinc cd /builddir/build/BUILD/espresso/mpich/src/utils/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/sinc.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -Wl,-rpath,/usr/lib64/python3.9/site-packages/mpich/espressomd CMakeFiles/sinc.dir/sinc_test.cpp.o -o sinc /usr/lib64/libboost_unit_test_framework.so ../../config/EspressoConfig.so make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 64%] Built target sinc make -f src/utils/tests/CMakeFiles/Cache_test.dir/build.make src/utils/tests/CMakeFiles/Cache_test.dir/depend make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/utils/tests /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/utils/tests /builddir/build/BUILD/espresso/mpich/src/utils/tests/CMakeFiles/Cache_test.dir/DependInfo.cmake --color= Scanning dependencies of target Cache_test make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' make -f src/utils/tests/CMakeFiles/Cache_test.dir/build.make src/utils/tests/CMakeFiles/Cache_test.dir/build make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' [ 64%] Building CXX object src/utils/tests/CMakeFiles/Cache_test.dir/Cache_test.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/utils/tests && /usr/bin/g++ -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -std=c++14 -o CMakeFiles/Cache_test.dir/Cache_test.cpp.o -c /builddir/build/BUILD/espresso/src/utils/tests/Cache_test.cpp [ 64%] Linking CXX executable Cache_test cd /builddir/build/BUILD/espresso/mpich/src/utils/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/Cache_test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -Wl,-rpath,/usr/lib64/python3.9/site-packages/mpich/espressomd CMakeFiles/Cache_test.dir/Cache_test.cpp.o -o Cache_test /usr/lib64/libboost_unit_test_framework.so ../../config/EspressoConfig.so make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 64%] Built target Cache_test make -f src/utils/tests/CMakeFiles/tuple_test.dir/build.make src/utils/tests/CMakeFiles/tuple_test.dir/depend make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/utils/tests /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/utils/tests /builddir/build/BUILD/espresso/mpich/src/utils/tests/CMakeFiles/tuple_test.dir/DependInfo.cmake --color= Scanning dependencies of target tuple_test make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' make -f src/utils/tests/CMakeFiles/tuple_test.dir/build.make src/utils/tests/CMakeFiles/tuple_test.dir/build make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' [ 64%] Building CXX object src/utils/tests/CMakeFiles/tuple_test.dir/tuple_test.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/utils/tests && /usr/bin/g++ -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -std=c++14 -o CMakeFiles/tuple_test.dir/tuple_test.cpp.o -c /builddir/build/BUILD/espresso/src/utils/tests/tuple_test.cpp [ 64%] Linking CXX executable tuple_test cd /builddir/build/BUILD/espresso/mpich/src/utils/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/tuple_test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -Wl,-rpath,/usr/lib64/python3.9/site-packages/mpich/espressomd CMakeFiles/tuple_test.dir/tuple_test.cpp.o -o tuple_test /usr/lib64/libboost_unit_test_framework.so ../../config/EspressoConfig.so make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 64%] Built target tuple_test make -f src/utils/tests/CMakeFiles/tensor_product.dir/build.make src/utils/tests/CMakeFiles/tensor_product.dir/depend make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/utils/tests /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/utils/tests /builddir/build/BUILD/espresso/mpich/src/utils/tests/CMakeFiles/tensor_product.dir/DependInfo.cmake --color= Scanning dependencies of target tensor_product make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' make -f src/utils/tests/CMakeFiles/tensor_product.dir/build.make src/utils/tests/CMakeFiles/tensor_product.dir/build make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' [ 65%] Building CXX object src/utils/tests/CMakeFiles/tensor_product.dir/tensor_product_test.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/utils/tests && /usr/bin/g++ -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -std=c++14 -o CMakeFiles/tensor_product.dir/tensor_product_test.cpp.o -c /builddir/build/BUILD/espresso/src/utils/tests/tensor_product_test.cpp [ 65%] Linking CXX executable tensor_product cd /builddir/build/BUILD/espresso/mpich/src/utils/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/tensor_product.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -Wl,-rpath,/usr/lib64/python3.9/site-packages/mpich/espressomd CMakeFiles/tensor_product.dir/tensor_product_test.cpp.o -o tensor_product /usr/lib64/libboost_unit_test_framework.so ../../config/EspressoConfig.so make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 65%] Built target tensor_product make -f src/utils/tests/CMakeFiles/as_const.dir/build.make src/utils/tests/CMakeFiles/as_const.dir/depend make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/utils/tests /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/utils/tests /builddir/build/BUILD/espresso/mpich/src/utils/tests/CMakeFiles/as_const.dir/DependInfo.cmake --color= Scanning dependencies of target as_const make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' make -f src/utils/tests/CMakeFiles/as_const.dir/build.make src/utils/tests/CMakeFiles/as_const.dir/build make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' [ 65%] Building CXX object src/utils/tests/CMakeFiles/as_const.dir/as_const_test.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/utils/tests && /usr/bin/g++ -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -std=c++14 -o CMakeFiles/as_const.dir/as_const_test.cpp.o -c /builddir/build/BUILD/espresso/src/utils/tests/as_const_test.cpp [ 65%] Linking CXX executable as_const cd /builddir/build/BUILD/espresso/mpich/src/utils/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/as_const.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -Wl,-rpath,/usr/lib64/python3.9/site-packages/mpich/espressomd CMakeFiles/as_const.dir/as_const_test.cpp.o -o as_const /usr/lib64/libboost_unit_test_framework.so ../../config/EspressoConfig.so make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 65%] Built target as_const make -f src/utils/tests/CMakeFiles/permute_ifield_test.dir/build.make src/utils/tests/CMakeFiles/permute_ifield_test.dir/depend make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/utils/tests /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/utils/tests /builddir/build/BUILD/espresso/mpich/src/utils/tests/CMakeFiles/permute_ifield_test.dir/DependInfo.cmake --color= Scanning dependencies of target permute_ifield_test make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' make -f src/utils/tests/CMakeFiles/permute_ifield_test.dir/build.make src/utils/tests/CMakeFiles/permute_ifield_test.dir/build make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' [ 67%] Building CXX object src/utils/tests/CMakeFiles/permute_ifield_test.dir/permute_ifield_test.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/utils/tests && /usr/bin/g++ -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -std=c++14 -o CMakeFiles/permute_ifield_test.dir/permute_ifield_test.cpp.o -c /builddir/build/BUILD/espresso/src/utils/tests/permute_ifield_test.cpp [ 67%] Linking CXX executable permute_ifield_test cd /builddir/build/BUILD/espresso/mpich/src/utils/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/permute_ifield_test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -Wl,-rpath,/usr/lib64/python3.9/site-packages/mpich/espressomd CMakeFiles/permute_ifield_test.dir/permute_ifield_test.cpp.o -o permute_ifield_test /usr/lib64/libboost_unit_test_framework.so ../../config/EspressoConfig.so make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 67%] Built target permute_ifield_test make -f src/utils/tests/CMakeFiles/interpolation.dir/build.make src/utils/tests/CMakeFiles/interpolation.dir/depend make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/utils/tests /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/utils/tests /builddir/build/BUILD/espresso/mpich/src/utils/tests/CMakeFiles/interpolation.dir/DependInfo.cmake --color= Scanning dependencies of target interpolation make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' make -f src/utils/tests/CMakeFiles/interpolation.dir/build.make src/utils/tests/CMakeFiles/interpolation.dir/build make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' [ 67%] Building CXX object src/utils/tests/CMakeFiles/interpolation.dir/interpolation_test.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/utils/tests && /usr/bin/g++ -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -std=c++14 -o CMakeFiles/interpolation.dir/interpolation_test.cpp.o -c /builddir/build/BUILD/espresso/src/utils/tests/interpolation_test.cpp [ 67%] Linking CXX executable interpolation cd /builddir/build/BUILD/espresso/mpich/src/utils/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/interpolation.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -Wl,-rpath,/usr/lib64/python3.9/site-packages/mpich/espressomd CMakeFiles/interpolation.dir/interpolation_test.cpp.o -o interpolation /usr/lib64/libboost_unit_test_framework.so ../../config/EspressoConfig.so make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 67%] Built target interpolation make -f src/utils/tests/CMakeFiles/interpolation_gradient.dir/build.make src/utils/tests/CMakeFiles/interpolation_gradient.dir/depend make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/utils/tests /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/utils/tests /builddir/build/BUILD/espresso/mpich/src/utils/tests/CMakeFiles/interpolation_gradient.dir/DependInfo.cmake --color= Scanning dependencies of target interpolation_gradient make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' make -f src/utils/tests/CMakeFiles/interpolation_gradient.dir/build.make src/utils/tests/CMakeFiles/interpolation_gradient.dir/build make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' [ 67%] Building CXX object src/utils/tests/CMakeFiles/interpolation_gradient.dir/interpolation_gradient_test.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/utils/tests && /usr/bin/g++ -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -std=c++14 -o CMakeFiles/interpolation_gradient.dir/interpolation_gradient_test.cpp.o -c /builddir/build/BUILD/espresso/src/utils/tests/interpolation_gradient_test.cpp [ 68%] Linking CXX executable interpolation_gradient cd /builddir/build/BUILD/espresso/mpich/src/utils/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/interpolation_gradient.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -Wl,-rpath,/usr/lib64/python3.9/site-packages/mpich/espressomd CMakeFiles/interpolation_gradient.dir/interpolation_gradient_test.cpp.o -o interpolation_gradient /usr/lib64/libboost_unit_test_framework.so ../../config/EspressoConfig.so make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 68%] Built target interpolation_gradient make -f src/utils/tests/CMakeFiles/matrix_vector_product.dir/build.make src/utils/tests/CMakeFiles/matrix_vector_product.dir/depend make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/utils/tests /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/utils/tests /builddir/build/BUILD/espresso/mpich/src/utils/tests/CMakeFiles/matrix_vector_product.dir/DependInfo.cmake --color= Scanning dependencies of target matrix_vector_product make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' make -f src/utils/tests/CMakeFiles/matrix_vector_product.dir/build.make src/utils/tests/CMakeFiles/matrix_vector_product.dir/build make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' [ 69%] Building CXX object src/utils/tests/CMakeFiles/matrix_vector_product.dir/matrix_vector_product.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/utils/tests && /usr/bin/g++ -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -std=c++14 -o CMakeFiles/matrix_vector_product.dir/matrix_vector_product.cpp.o -c /builddir/build/BUILD/espresso/src/utils/tests/matrix_vector_product.cpp [ 69%] Linking CXX executable matrix_vector_product cd /builddir/build/BUILD/espresso/mpich/src/utils/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/matrix_vector_product.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -Wl,-rpath,/usr/lib64/python3.9/site-packages/mpich/espressomd CMakeFiles/matrix_vector_product.dir/matrix_vector_product.cpp.o -o matrix_vector_product /usr/lib64/libboost_unit_test_framework.so ../../config/EspressoConfig.so make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 69%] Built target matrix_vector_product make -f src/utils/tests/CMakeFiles/Array_test.dir/build.make src/utils/tests/CMakeFiles/Array_test.dir/depend make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/utils/tests /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/utils/tests /builddir/build/BUILD/espresso/mpich/src/utils/tests/CMakeFiles/Array_test.dir/DependInfo.cmake --color= Scanning dependencies of target Array_test make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' make -f src/utils/tests/CMakeFiles/Array_test.dir/build.make src/utils/tests/CMakeFiles/Array_test.dir/build make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' [ 69%] Building CXX object src/utils/tests/CMakeFiles/Array_test.dir/Array_test.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/utils/tests && /usr/bin/g++ -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -std=c++14 -o CMakeFiles/Array_test.dir/Array_test.cpp.o -c /builddir/build/BUILD/espresso/src/utils/tests/Array_test.cpp [ 69%] Linking CXX executable Array_test cd /builddir/build/BUILD/espresso/mpich/src/utils/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/Array_test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -Wl,-rpath,/usr/lib64/python3.9/site-packages/mpich/espressomd CMakeFiles/Array_test.dir/Array_test.cpp.o -o Array_test /usr/lib64/libboost_unit_test_framework.so /usr/lib64/libboost_serialization.so ../../config/EspressoConfig.so make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 69%] Built target Array_test make -f src/utils/tests/CMakeFiles/contains_test.dir/build.make src/utils/tests/CMakeFiles/contains_test.dir/depend make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/utils/tests /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/utils/tests /builddir/build/BUILD/espresso/mpich/src/utils/tests/CMakeFiles/contains_test.dir/DependInfo.cmake --color= Scanning dependencies of target contains_test make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' make -f src/utils/tests/CMakeFiles/contains_test.dir/build.make src/utils/tests/CMakeFiles/contains_test.dir/build make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' [ 69%] Building CXX object src/utils/tests/CMakeFiles/contains_test.dir/contains_test.cpp.o cd /builddir/build/BUILD/espresso/mpich/src/utils/tests && /usr/bin/g++ -I/builddir/build/BUILD/espresso/src/core -I/builddir/build/BUILD/espresso/src/utils/include -I/builddir/build/BUILD/espresso/src/config -I/builddir/build/BUILD/espresso/mpich/src/config -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -std=c++14 -o CMakeFiles/contains_test.dir/contains_test.cpp.o -c /builddir/build/BUILD/espresso/src/utils/tests/contains_test.cpp [ 70%] Linking CXX executable contains_test cd /builddir/build/BUILD/espresso/mpich/src/utils/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/contains_test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -DNDEBUG -Wl,-rpath,/usr/lib64/python3.9/site-packages/mpich/espressomd CMakeFiles/contains_test.dir/contains_test.cpp.o -o contains_test /usr/lib64/libboost_unit_test_framework.so ../../config/EspressoConfig.so make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 70%] Built target contains_test make -f src/CMakeFiles/check_unit_tests.dir/build.make src/CMakeFiles/check_unit_tests.dir/depend make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src /builddir/build/BUILD/espresso/mpich/src/CMakeFiles/check_unit_tests.dir/DependInfo.cmake --color= Scanning dependencies of target check_unit_tests make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' make -f src/CMakeFiles/check_unit_tests.dir/build.make src/CMakeFiles/check_unit_tests.dir/build make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich/src && /usr/bin/ctest --timeout 300 --output-on-failure Test project /builddir/build/BUILD/espresso/mpich/src Start 1: RuntimeError_test 1/68 Test #1: RuntimeError_test ................ Passed 0.01 sec Start 2: RuntimeErrorCollector_test 2/68 Test #2: RuntimeErrorCollector_test ....... Passed 0.04 sec Start 3: ScriptInterface_test 3/68 Test #3: ScriptInterface_test ............. Passed 0.02 sec Start 4: Wall_test 4/68 Test #4: Wall_test ........................ Passed 0.04 sec Start 5: Ellipsoid_test 5/68 Test #5: Ellipsoid_test ................... Passed 0.01 sec Start 6: MpiCallbacks_test 6/68 Test #6: MpiCallbacks_test ................ Passed 0.05 sec Start 7: ParallelScriptInterface_test 7/68 Test #7: ParallelScriptInterface_test ..... Passed 0.05 sec Start 8: AutoParameters_test 8/68 Test #8: AutoParameters_test .............. Passed 0.02 sec Start 9: AutoParameter_test 9/68 Test #9: AutoParameter_test ............... Passed 0.00 sec Start 10: Variant_test 10/68 Test #10: Variant_test ..................... Passed 0.00 sec Start 11: ParticleIterator_test 11/68 Test #11: ParticleIterator_test ............ Passed 0.01 sec Start 12: link_cell_test 12/68 Test #12: link_cell_test ................... Passed 0.01 sec Start 13: verlet_ia_test 13/68 Test #13: verlet_ia_test ................... Passed 0.40 sec Start 14: ParticleCache_test 14/68 Test #14: ParticleCache_test ............... Passed 0.08 sec Start 15: Particle_test 15/68 Test #15: Particle_test .................... Passed 0.01 sec Start 16: get_value 16/68 Test #16: get_value ........................ Passed 0.00 sec Start 17: field_coupling_couplings 17/68 Test #17: field_coupling_couplings ......... Passed 0.00 sec Start 18: field_coupling_fields 18/68 Test #18: field_coupling_fields ............ Passed 0.01 sec Start 19: field_coupling_force_field 19/68 Test #19: field_coupling_force_field ....... Passed 0.00 sec Start 20: periodic_fold_test 20/68 Test #20: periodic_fold_test ............... Passed 0.00 sec Start 21: None_test 21/68 Test #21: None_test ........................ Passed 0.00 sec Start 22: grid_test 22/68 Test #22: grid_test ........................ Passed 0.01 sec Start 23: BoxGeometry_test 23/68 Test #23: BoxGeometry_test ................. Passed 0.00 sec Start 24: LocalBox_test 24/68 Test #24: LocalBox_test .................... Passed 0.00 sec Start 25: abs_test 25/68 Test #25: abs_test ......................... Passed 0.00 sec Start 26: Vector_test 26/68 Test #26: Vector_test ...................... Passed 0.01 sec Start 27: Factory_test 27/68 Test #27: Factory_test ..................... Passed 0.00 sec Start 28: NumeratedContainer_test 28/68 Test #28: NumeratedContainer_test .......... Passed 0.00 sec Start 29: make_function_test 29/68 Test #29: make_function_test ............... Passed 0.00 sec Start 30: List_test 30/68 Test #30: List_test ........................ Passed 0.01 sec Start 31: SkipIterator_test 31/68 Test #31: SkipIterator_test ................ Passed 0.00 sec Start 32: keys_test 32/68 Test #32: keys_test ........................ Passed 0.00 sec Start 33: Cache_test 33/68 Test #33: Cache_test ....................... Passed 0.01 sec Start 34: histogram 34/68 Test #34: histogram ........................ Passed 0.00 sec Start 35: accumulator 35/68 Test #35: accumulator ...................... Passed 0.00 sec Start 36: strcat_alloc 36/68 Test #36: strcat_alloc ..................... Passed 0.00 sec Start 37: int_pow 37/68 Test #37: int_pow .......................... Passed 0.00 sec Start 38: sgn 38/68 Test #38: sgn .............................. Passed 0.00 sec Start 39: AS_erfc_part 39/68 Test #39: AS_erfc_part ..................... Passed 0.00 sec Start 40: sinc 40/68 Test #40: sinc ............................. Passed 0.00 sec Start 41: as_const 41/68 Test #41: as_const ......................... Passed 0.00 sec Start 42: permute_ifield_test 42/68 Test #42: permute_ifield_test .............. Passed 0.00 sec Start 43: vec_rotate 43/68 Test #43: vec_rotate ....................... Passed 0.00 sec Start 44: tensor_product 44/68 Test #44: tensor_product ................... Passed 0.00 sec Start 45: interpolation_gradient 45/68 Test #45: interpolation_gradient ........... Passed 0.01 sec Start 46: interpolation 46/68 Test #46: interpolation .................... Passed 0.01 sec Start 47: Span_test 47/68 Test #47: Span_test ........................ Passed 0.01 sec Start 48: matrix_vector_product 48/68 Test #48: matrix_vector_product ............ Passed 0.00 sec Start 49: ravel_index 49/68 Test #49: ravel_index ...................... Passed 0.00 sec Start 50: tuple_test 50/68 Test #50: tuple_test ....................... Passed 0.00 sec Start 51: Array_test 51/68 Test #51: Array_test ....................... Passed 0.01 sec Start 52: contains_test 52/68 Test #52: contains_test .................... Passed 0.00 sec Start 53: Counter_test 53/68 Test #53: Counter_test ..................... Passed 0.00 sec Start 54: RunningAverage_test 54/68 Test #54: RunningAverage_test .............. Passed 0.00 sec Start 55: for_each_pair_test 55/68 Test #55: for_each_pair_test ............... Passed 0.01 sec Start 56: raster_test 56/68 Test #56: raster_test ...................... Passed 0.00 sec Start 57: make_lin_space_test 57/68 Test #57: make_lin_space_test .............. Passed 0.00 sec Start 58: sampling_test 58/68 Test #58: sampling_test .................... Passed 0.01 sec Start 59: coordinate_transformation_test 59/68 Test #59: coordinate_transformation_test ... Passed 0.00 sec Start 60: rotation_matrix_test 60/68 Test #60: rotation_matrix_test ............. Passed 0.00 sec Start 61: uniform_test 61/68 Test #61: uniform_test ..................... Passed 0.00 sec Start 62: gather_buffer_test 62/68 Test #62: gather_buffer_test ............... Passed 0.06 sec Start 63: scatter_buffer_test 63/68 Test #63: scatter_buffer_test .............. Passed 0.05 sec Start 64: all_compare_test 64/68 Test #64: all_compare_test ................. Passed 0.05 sec Start 65: gatherv_test 65/68 Test #65: gatherv_test ..................... Passed 0.02 sec Start 66: all_gatherv_test 66/68 Test #66: all_gatherv_test ................. Passed 0.02 sec Start 67: sendrecv_test 67/68 Test #67: sendrecv_test .................... Passed 0.05 sec Start 68: PdbParser_test 68/68 Test #68: PdbParser_test ................... Passed 0.00 sec 100% tests passed, 0 tests failed out of 68 Total Test time (real) = 1.25 sec make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 70%] Built target check_unit_tests make -f src/python/object_in_fluid/CMakeFiles/object_in_fluid.dir/build.make src/python/object_in_fluid/CMakeFiles/object_in_fluid.dir/depend make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/object_in_fluid /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/python/object_in_fluid /builddir/build/BUILD/espresso/mpich/src/python/object_in_fluid/CMakeFiles/object_in_fluid.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' make -f src/python/object_in_fluid/CMakeFiles/object_in_fluid.dir/build.make src/python/object_in_fluid/CMakeFiles/object_in_fluid.dir/build make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich/src/python/object_in_fluid && /usr/bin/cmake -E copy /builddir/build/BUILD/espresso/src/python/object_in_fluid/__init__.py /builddir/build/BUILD/espresso/mpich/src/python/object_in_fluid//__init__.py cd /builddir/build/BUILD/espresso/mpich/src/python/object_in_fluid && /usr/bin/cmake -E copy /builddir/build/BUILD/espresso/src/python/object_in_fluid/oif_classes.py /builddir/build/BUILD/espresso/mpich/src/python/object_in_fluid//oif_classes.py cd /builddir/build/BUILD/espresso/mpich/src/python/object_in_fluid && /usr/bin/cmake -E copy /builddir/build/BUILD/espresso/src/python/object_in_fluid/oif_utils.py /builddir/build/BUILD/espresso/mpich/src/python/object_in_fluid//oif_utils.py make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 70%] Built target object_in_fluid make -f src/python/espressomd/CMakeFiles/gen_pxiconfig.dir/build.make src/python/espressomd/CMakeFiles/gen_pxiconfig.dir/depend make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/espressomd /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/python/espressomd /builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/gen_pxiconfig.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' make -f src/python/espressomd/CMakeFiles/gen_pxiconfig.dir/build.make src/python/espressomd/CMakeFiles/gen_pxiconfig.dir/build make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' make[3]: Nothing to be done for 'src/python/espressomd/CMakeFiles/gen_pxiconfig.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 71%] Built target gen_pxiconfig make -f src/python/espressomd/CMakeFiles/espressomd_thermostat.dir/build.make src/python/espressomd/CMakeFiles/espressomd_thermostat.dir/depend make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/espressomd /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/python/espressomd /builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_thermostat.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' make -f src/python/espressomd/CMakeFiles/espressomd_thermostat.dir/build.make src/python/espressomd/CMakeFiles/espressomd_thermostat.dir/build make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' make[3]: Nothing to be done for 'src/python/espressomd/CMakeFiles/espressomd_thermostat.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 72%] Built target espressomd_thermostat make -f src/python/espressomd/CMakeFiles/espressomd_code_info.dir/build.make src/python/espressomd/CMakeFiles/espressomd_code_info.dir/depend make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/espressomd /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/python/espressomd /builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_code_info.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' make -f src/python/espressomd/CMakeFiles/espressomd_code_info.dir/build.make src/python/espressomd/CMakeFiles/espressomd_code_info.dir/build make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' make[3]: Nothing to be done for 'src/python/espressomd/CMakeFiles/espressomd_code_info.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 73%] Built target espressomd_code_info make -f src/python/espressomd/CMakeFiles/espressomd_visualization_opengl.dir/build.make src/python/espressomd/CMakeFiles/espressomd_visualization_opengl.dir/depend make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/espressomd /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/python/espressomd /builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_visualization_opengl.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' make -f src/python/espressomd/CMakeFiles/espressomd_visualization_opengl.dir/build.make src/python/espressomd/CMakeFiles/espressomd_visualization_opengl.dir/build make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' make[3]: Nothing to be done for 'src/python/espressomd/CMakeFiles/espressomd_visualization_opengl.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 74%] Built target espressomd_visualization_opengl make -f src/python/espressomd/CMakeFiles/espressomd_visualization_mayavi.dir/build.make src/python/espressomd/CMakeFiles/espressomd_visualization_mayavi.dir/depend make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/espressomd /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/python/espressomd /builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_visualization_mayavi.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' make -f src/python/espressomd/CMakeFiles/espressomd_visualization_mayavi.dir/build.make src/python/espressomd/CMakeFiles/espressomd_visualization_mayavi.dir/build make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' make[3]: Nothing to be done for 'src/python/espressomd/CMakeFiles/espressomd_visualization_mayavi.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 75%] Built target espressomd_visualization_mayavi make -f src/python/espressomd/CMakeFiles/espressomd_visualization.dir/build.make src/python/espressomd/CMakeFiles/espressomd_visualization.dir/depend make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/espressomd /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/python/espressomd /builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_visualization.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' make -f src/python/espressomd/CMakeFiles/espressomd_visualization.dir/build.make src/python/espressomd/CMakeFiles/espressomd_visualization.dir/build make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' make[3]: Nothing to be done for 'src/python/espressomd/CMakeFiles/espressomd_visualization.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 75%] Built target espressomd_visualization make -f src/python/espressomd/CMakeFiles/espressomd_version.dir/build.make src/python/espressomd/CMakeFiles/espressomd_version.dir/depend make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/espressomd /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/python/espressomd /builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_version.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' make -f src/python/espressomd/CMakeFiles/espressomd_version.dir/build.make src/python/espressomd/CMakeFiles/espressomd_version.dir/build make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' make[3]: Nothing to be done for 'src/python/espressomd/CMakeFiles/espressomd_version.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 76%] Built target espressomd_version make -f src/python/espressomd/CMakeFiles/espressomd_system.dir/build.make src/python/espressomd/CMakeFiles/espressomd_system.dir/depend make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/espressomd /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/python/espressomd /builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_system.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' make -f src/python/espressomd/CMakeFiles/espressomd_system.dir/build.make src/python/espressomd/CMakeFiles/espressomd_system.dir/build make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' make[3]: Nothing to be done for 'src/python/espressomd/CMakeFiles/espressomd_system.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 78%] Built target espressomd_system make -f src/python/espressomd/CMakeFiles/espressomd_electrostatic_extensions.dir/build.make src/python/espressomd/CMakeFiles/espressomd_electrostatic_extensions.dir/depend make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/espressomd /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/python/espressomd /builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_electrostatic_extensions.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' make -f src/python/espressomd/CMakeFiles/espressomd_electrostatic_extensions.dir/build.make src/python/espressomd/CMakeFiles/espressomd_electrostatic_extensions.dir/build make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' make[3]: Nothing to be done for 'src/python/espressomd/CMakeFiles/espressomd_electrostatic_extensions.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 79%] Built target espressomd_electrostatic_extensions make -f src/python/espressomd/CMakeFiles/espressomd_utils.dir/build.make src/python/espressomd/CMakeFiles/espressomd_utils.dir/depend make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/espressomd /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/python/espressomd /builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_utils.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' make -f src/python/espressomd/CMakeFiles/espressomd_utils.dir/build.make src/python/espressomd/CMakeFiles/espressomd_utils.dir/build make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' make[3]: Nothing to be done for 'src/python/espressomd/CMakeFiles/espressomd_utils.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 80%] Built target espressomd_utils make -f src/python/espressomd/CMakeFiles/espressomd_electrokinetics.dir/build.make src/python/espressomd/CMakeFiles/espressomd_electrokinetics.dir/depend make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/espressomd /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/python/espressomd /builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_electrokinetics.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' make -f src/python/espressomd/CMakeFiles/espressomd_electrokinetics.dir/build.make src/python/espressomd/CMakeFiles/espressomd_electrokinetics.dir/build make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' make[3]: Nothing to be done for 'src/python/espressomd/CMakeFiles/espressomd_electrokinetics.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 81%] Built target espressomd_electrokinetics make -f src/python/espressomd/CMakeFiles/espressomd_cellsystem.dir/build.make src/python/espressomd/CMakeFiles/espressomd_cellsystem.dir/depend make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/espressomd /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/python/espressomd /builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_cellsystem.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' make -f src/python/espressomd/CMakeFiles/espressomd_cellsystem.dir/build.make src/python/espressomd/CMakeFiles/espressomd_cellsystem.dir/build make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' make[3]: Nothing to be done for 'src/python/espressomd/CMakeFiles/espressomd_cellsystem.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 82%] Built target espressomd_cellsystem make -f src/python/espressomd/CMakeFiles/espressomd_electrostatics.dir/build.make src/python/espressomd/CMakeFiles/espressomd_electrostatics.dir/depend make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/espressomd /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/python/espressomd /builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_electrostatics.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' make -f src/python/espressomd/CMakeFiles/espressomd_electrostatics.dir/build.make src/python/espressomd/CMakeFiles/espressomd_electrostatics.dir/build make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' make[3]: Nothing to be done for 'src/python/espressomd/CMakeFiles/espressomd_electrostatics.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 83%] Built target espressomd_electrostatics make -f src/python/espressomd/CMakeFiles/espressomd_diamond.dir/build.make src/python/espressomd/CMakeFiles/espressomd_diamond.dir/depend make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/espressomd /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/python/espressomd /builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_diamond.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' make -f src/python/espressomd/CMakeFiles/espressomd_diamond.dir/build.make src/python/espressomd/CMakeFiles/espressomd_diamond.dir/build make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' make[3]: Nothing to be done for 'src/python/espressomd/CMakeFiles/espressomd_diamond.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 83%] Built target espressomd_diamond make -f src/python/espressomd/CMakeFiles/espressomd_cuda_init.dir/build.make src/python/espressomd/CMakeFiles/espressomd_cuda_init.dir/depend make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/espressomd /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/python/espressomd /builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_cuda_init.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' make -f src/python/espressomd/CMakeFiles/espressomd_cuda_init.dir/build.make src/python/espressomd/CMakeFiles/espressomd_cuda_init.dir/build make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' make[3]: Nothing to be done for 'src/python/espressomd/CMakeFiles/espressomd_cuda_init.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 84%] Built target espressomd_cuda_init make -f src/python/espressomd/CMakeFiles/espressomd_integrate.dir/build.make src/python/espressomd/CMakeFiles/espressomd_integrate.dir/depend make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/espressomd /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/python/espressomd /builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_integrate.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' make -f src/python/espressomd/CMakeFiles/espressomd_integrate.dir/build.make src/python/espressomd/CMakeFiles/espressomd_integrate.dir/build make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' make[3]: Nothing to be done for 'src/python/espressomd/CMakeFiles/espressomd_integrate.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 85%] Built target espressomd_integrate make -f src/python/espressomd/CMakeFiles/espressomd_actors.dir/build.make src/python/espressomd/CMakeFiles/espressomd_actors.dir/depend make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/espressomd /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/python/espressomd /builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_actors.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' make -f src/python/espressomd/CMakeFiles/espressomd_actors.dir/build.make src/python/espressomd/CMakeFiles/espressomd_actors.dir/build make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' make[3]: Nothing to be done for 'src/python/espressomd/CMakeFiles/espressomd_actors.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 86%] Built target espressomd_actors make -f src/python/espressomd/CMakeFiles/espressomd__init.dir/build.make src/python/espressomd/CMakeFiles/espressomd__init.dir/depend make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/espressomd /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/python/espressomd /builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd__init.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' make -f src/python/espressomd/CMakeFiles/espressomd__init.dir/build.make src/python/espressomd/CMakeFiles/espressomd__init.dir/build make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' make[3]: Nothing to be done for 'src/python/espressomd/CMakeFiles/espressomd__init.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 86%] Built target espressomd__init make -f src/python/espressomd/CMakeFiles/espressomd_polymer.dir/build.make src/python/espressomd/CMakeFiles/espressomd_polymer.dir/depend make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/espressomd /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/python/espressomd /builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_polymer.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' make -f src/python/espressomd/CMakeFiles/espressomd_polymer.dir/build.make src/python/espressomd/CMakeFiles/espressomd_polymer.dir/build make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' make[3]: Nothing to be done for 'src/python/espressomd/CMakeFiles/espressomd_polymer.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 87%] Built target espressomd_polymer make -f src/python/espressomd/CMakeFiles/espressomd_galilei.dir/build.make src/python/espressomd/CMakeFiles/espressomd_galilei.dir/depend make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/espressomd /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/python/espressomd /builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_galilei.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' make -f src/python/espressomd/CMakeFiles/espressomd_galilei.dir/build.make src/python/espressomd/CMakeFiles/espressomd_galilei.dir/build make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' make[3]: Nothing to be done for 'src/python/espressomd/CMakeFiles/espressomd_galilei.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 89%] Built target espressomd_galilei make -f src/python/espressomd/CMakeFiles/espressomd_reaction_ensemble.dir/build.make src/python/espressomd/CMakeFiles/espressomd_reaction_ensemble.dir/depend make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/espressomd /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/python/espressomd /builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_reaction_ensemble.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' make -f src/python/espressomd/CMakeFiles/espressomd_reaction_ensemble.dir/build.make src/python/espressomd/CMakeFiles/espressomd_reaction_ensemble.dir/build make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' make[3]: Nothing to be done for 'src/python/espressomd/CMakeFiles/espressomd_reaction_ensemble.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 90%] Built target espressomd_reaction_ensemble make -f src/python/espressomd/CMakeFiles/espressomd_analyze.dir/build.make src/python/espressomd/CMakeFiles/espressomd_analyze.dir/depend make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/espressomd /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/python/espressomd /builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_analyze.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' make -f src/python/espressomd/CMakeFiles/espressomd_analyze.dir/build.make src/python/espressomd/CMakeFiles/espressomd_analyze.dir/build make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' make[3]: Nothing to be done for 'src/python/espressomd/CMakeFiles/espressomd_analyze.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 91%] Built target espressomd_analyze make -f src/python/espressomd/CMakeFiles/espressomd_particle_data.dir/build.make src/python/espressomd/CMakeFiles/espressomd_particle_data.dir/depend make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/espressomd /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/python/espressomd /builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_particle_data.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' make -f src/python/espressomd/CMakeFiles/espressomd_particle_data.dir/build.make src/python/espressomd/CMakeFiles/espressomd_particle_data.dir/build make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' make[3]: Nothing to be done for 'src/python/espressomd/CMakeFiles/espressomd_particle_data.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 92%] Built target espressomd_particle_data make -f src/python/espressomd/CMakeFiles/espressomd_collision_detection.dir/build.make src/python/espressomd/CMakeFiles/espressomd_collision_detection.dir/depend make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/espressomd /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/python/espressomd /builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_collision_detection.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' make -f src/python/espressomd/CMakeFiles/espressomd_collision_detection.dir/build.make src/python/espressomd/CMakeFiles/espressomd_collision_detection.dir/build make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' make[3]: Nothing to be done for 'src/python/espressomd/CMakeFiles/espressomd_collision_detection.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 93%] Built target espressomd_collision_detection make -f src/python/espressomd/CMakeFiles/espressomd_script_interface.dir/build.make src/python/espressomd/CMakeFiles/espressomd_script_interface.dir/depend make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/espressomd /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/python/espressomd /builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_script_interface.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' make -f src/python/espressomd/CMakeFiles/espressomd_script_interface.dir/build.make src/python/espressomd/CMakeFiles/espressomd_script_interface.dir/build make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' make[3]: Nothing to be done for 'src/python/espressomd/CMakeFiles/espressomd_script_interface.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 94%] Built target espressomd_script_interface make -f src/python/espressomd/CMakeFiles/espressomd_globals.dir/build.make src/python/espressomd/CMakeFiles/espressomd_globals.dir/depend make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/espressomd /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/python/espressomd /builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_globals.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' make -f src/python/espressomd/CMakeFiles/espressomd_globals.dir/build.make src/python/espressomd/CMakeFiles/espressomd_globals.dir/build make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' make[3]: Nothing to be done for 'src/python/espressomd/CMakeFiles/espressomd_globals.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 94%] Built target espressomd_globals make -f src/python/espressomd/CMakeFiles/espressomd_magnetostatic_extensions.dir/build.make src/python/espressomd/CMakeFiles/espressomd_magnetostatic_extensions.dir/depend make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/espressomd /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/python/espressomd /builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_magnetostatic_extensions.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' make -f src/python/espressomd/CMakeFiles/espressomd_magnetostatic_extensions.dir/build.make src/python/espressomd/CMakeFiles/espressomd_magnetostatic_extensions.dir/build make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' make[3]: Nothing to be done for 'src/python/espressomd/CMakeFiles/espressomd_magnetostatic_extensions.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 95%] Built target espressomd_magnetostatic_extensions make -f src/python/espressomd/CMakeFiles/espressomd_interactions.dir/build.make src/python/espressomd/CMakeFiles/espressomd_interactions.dir/depend make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/espressomd /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/python/espressomd /builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_interactions.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' make -f src/python/espressomd/CMakeFiles/espressomd_interactions.dir/build.make src/python/espressomd/CMakeFiles/espressomd_interactions.dir/build make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' make[3]: Nothing to be done for 'src/python/espressomd/CMakeFiles/espressomd_interactions.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 96%] Built target espressomd_interactions make -f src/python/espressomd/CMakeFiles/espressomd_lb.dir/build.make src/python/espressomd/CMakeFiles/espressomd_lb.dir/depend make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/espressomd /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/python/espressomd /builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_lb.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' make -f src/python/espressomd/CMakeFiles/espressomd_lb.dir/build.make src/python/espressomd/CMakeFiles/espressomd_lb.dir/build make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' make[3]: Nothing to be done for 'src/python/espressomd/CMakeFiles/espressomd_lb.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 97%] Built target espressomd_lb make -f src/python/espressomd/CMakeFiles/espressomd_minimize_energy.dir/build.make src/python/espressomd/CMakeFiles/espressomd_minimize_energy.dir/depend make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/espressomd /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/python/espressomd /builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_minimize_energy.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' make -f src/python/espressomd/CMakeFiles/espressomd_minimize_energy.dir/build.make src/python/espressomd/CMakeFiles/espressomd_minimize_energy.dir/build make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' make[3]: Nothing to be done for 'src/python/espressomd/CMakeFiles/espressomd_minimize_energy.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 97%] Built target espressomd_minimize_energy make -f src/python/espressomd/CMakeFiles/espressomd_magnetostatics.dir/build.make src/python/espressomd/CMakeFiles/espressomd_magnetostatics.dir/depend make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/espressomd /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/python/espressomd /builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_magnetostatics.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' make -f src/python/espressomd/CMakeFiles/espressomd_magnetostatics.dir/build.make src/python/espressomd/CMakeFiles/espressomd_magnetostatics.dir/build make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' make[3]: Nothing to be done for 'src/python/espressomd/CMakeFiles/espressomd_magnetostatics.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [ 98%] Built target espressomd_magnetostatics make -f src/python/espressomd/CMakeFiles/espressomd_profiler.dir/build.make src/python/espressomd/CMakeFiles/espressomd_profiler.dir/depend make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/espressomd /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/python/espressomd /builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_profiler.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' make -f src/python/espressomd/CMakeFiles/espressomd_profiler.dir/build.make src/python/espressomd/CMakeFiles/espressomd_profiler.dir/build make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' make[3]: Nothing to be done for 'src/python/espressomd/CMakeFiles/espressomd_profiler.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [100%] Built target espressomd_profiler make -f src/python/espressomd/CMakeFiles/espressomd_scafacos.dir/build.make src/python/espressomd/CMakeFiles/espressomd_scafacos.dir/depend make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/espressomd /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/python/espressomd /builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd_scafacos.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' make -f src/python/espressomd/CMakeFiles/espressomd_scafacos.dir/build.make src/python/espressomd/CMakeFiles/espressomd_scafacos.dir/build make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' make[3]: Nothing to be done for 'src/python/espressomd/CMakeFiles/espressomd_scafacos.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [100%] Built target espressomd_scafacos make -f src/python/espressomd/CMakeFiles/espressomd.dir/build.make src/python/espressomd/CMakeFiles/espressomd.dir/depend make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python/espressomd /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/python/espressomd /builddir/build/BUILD/espresso/mpich/src/python/espressomd/CMakeFiles/espressomd.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' make -f src/python/espressomd/CMakeFiles/espressomd.dir/build.make src/python/espressomd/CMakeFiles/espressomd.dir/build make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich/src/python/espressomd && /usr/bin/cmake -E copy /builddir/build/BUILD/espresso/src/python/espressomd/__cinit__.py /builddir/build/BUILD/espresso/mpich/src/python/espressomd//__cinit__.py cd /builddir/build/BUILD/espresso/mpich/src/python/espressomd && /usr/bin/cmake -E copy /builddir/build/BUILD/espresso/src/python/espressomd/__init__.py /builddir/build/BUILD/espresso/mpich/src/python/espressomd//__init__.py cd /builddir/build/BUILD/espresso/mpich/src/python/espressomd && /usr/bin/cmake -E copy /builddir/build/BUILD/espresso/src/python/espressomd/accumulators.py /builddir/build/BUILD/espresso/mpich/src/python/espressomd//accumulators.py cd /builddir/build/BUILD/espresso/mpich/src/python/espressomd && /usr/bin/cmake -E copy /builddir/build/BUILD/espresso/src/python/espressomd/checkpointing.py /builddir/build/BUILD/espresso/mpich/src/python/espressomd//checkpointing.py cd /builddir/build/BUILD/espresso/mpich/src/python/espressomd && /usr/bin/cmake -E copy /builddir/build/BUILD/espresso/src/python/espressomd/cluster_analysis.py /builddir/build/BUILD/espresso/mpich/src/python/espressomd//cluster_analysis.py cd /builddir/build/BUILD/espresso/mpich/src/python/espressomd && /usr/bin/cmake -E copy /builddir/build/BUILD/espresso/src/python/espressomd/comfixed.py /builddir/build/BUILD/espresso/mpich/src/python/espressomd//comfixed.py cd /builddir/build/BUILD/espresso/mpich/src/python/espressomd && /usr/bin/cmake -E copy /builddir/build/BUILD/espresso/src/python/espressomd/constraints.py /builddir/build/BUILD/espresso/mpich/src/python/espressomd//constraints.py cd /builddir/build/BUILD/espresso/mpich/src/python/espressomd && /usr/bin/cmake -E copy /builddir/build/BUILD/espresso/src/python/espressomd/drude_helpers.py /builddir/build/BUILD/espresso/mpich/src/python/espressomd//drude_helpers.py cd /builddir/build/BUILD/espresso/mpich/src/python/espressomd && /usr/bin/cmake -E copy /builddir/build/BUILD/espresso/src/python/espressomd/ekboundaries.py /builddir/build/BUILD/espresso/mpich/src/python/espressomd//ekboundaries.py cd /builddir/build/BUILD/espresso/mpich/src/python/espressomd && /usr/bin/cmake -E copy /builddir/build/BUILD/espresso/src/python/espressomd/gen_code_info.py /builddir/build/BUILD/espresso/mpich/src/python/espressomd//gen_code_info.py cd /builddir/build/BUILD/espresso/mpich/src/python/espressomd && /usr/bin/cmake -E copy /builddir/build/BUILD/espresso/src/python/espressomd/gen_pxiconfig.py /builddir/build/BUILD/espresso/mpich/src/python/espressomd//gen_pxiconfig.py cd /builddir/build/BUILD/espresso/mpich/src/python/espressomd && /usr/bin/cmake -E copy /builddir/build/BUILD/espresso/src/python/espressomd/highlander.py /builddir/build/BUILD/espresso/mpich/src/python/espressomd//highlander.py cd /builddir/build/BUILD/espresso/mpich/src/python/espressomd && /usr/bin/cmake -E copy /builddir/build/BUILD/espresso/src/python/espressomd/lbboundaries.py /builddir/build/BUILD/espresso/mpich/src/python/espressomd//lbboundaries.py cd /builddir/build/BUILD/espresso/mpich/src/python/espressomd && /usr/bin/cmake -E copy /builddir/build/BUILD/espresso/src/python/espressomd/observables.py /builddir/build/BUILD/espresso/mpich/src/python/espressomd//observables.py cd /builddir/build/BUILD/espresso/mpich/src/python/espressomd && /usr/bin/cmake -E copy /builddir/build/BUILD/espresso/src/python/espressomd/pair_criteria.py /builddir/build/BUILD/espresso/mpich/src/python/espressomd//pair_criteria.py cd /builddir/build/BUILD/espresso/mpich/src/python/espressomd && /usr/bin/cmake -E copy /builddir/build/BUILD/espresso/src/python/espressomd/shapes.py /builddir/build/BUILD/espresso/mpich/src/python/espressomd//shapes.py cd /builddir/build/BUILD/espresso/mpich/src/python/espressomd && /usr/bin/cmake -E copy /builddir/build/BUILD/espresso/src/python/espressomd/virtual_sites.py /builddir/build/BUILD/espresso/mpich/src/python/espressomd//virtual_sites.py cd /builddir/build/BUILD/espresso/mpich/src/python/espressomd && /usr/bin/cmake -E copy /builddir/build/BUILD/espresso/src/python/espressomd/io/__init__.py /builddir/build/BUILD/espresso/mpich/src/python/espressomd/io/__init__.py make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [100%] Built target espressomd make -f src/python/CMakeFiles/pypresso.dir/build.make src/python/CMakeFiles/pypresso.dir/depend make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/src/python /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/src/python /builddir/build/BUILD/espresso/mpich/src/python/CMakeFiles/pypresso.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' make -f src/python/CMakeFiles/pypresso.dir/build.make src/python/CMakeFiles/pypresso.dir/build make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' make[3]: Nothing to be done for 'src/python/CMakeFiles/pypresso.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [100%] Built target pypresso make -f testsuite/python/CMakeFiles/python_test_data.dir/build.make testsuite/python/CMakeFiles/python_test_data.dir/depend make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/testsuite/python /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/testsuite/python /builddir/build/BUILD/espresso/mpich/testsuite/python/CMakeFiles/python_test_data.dir/DependInfo.cmake --color= Scanning dependencies of target python_test_data make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' make -f testsuite/python/CMakeFiles/python_test_data.dir/build.make testsuite/python/CMakeFiles/python_test_data.dir/build make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich/testsuite/python && /usr/bin/cmake -E copy_directory /builddir/build/BUILD/espresso/testsuite/python/data /builddir/build/BUILD/espresso/mpich/testsuite/python/data cd /builddir/build/BUILD/espresso/mpich/testsuite/python && /usr/bin/cmake -E copy /builddir/build/BUILD/espresso/testsuite/python/tests_common.py /builddir/build/BUILD/espresso/mpich/testsuite/python cd /builddir/build/BUILD/espresso/mpich/testsuite/python && /usr/bin/cmake -E copy /builddir/build/BUILD/espresso/testsuite/python/unittest_decorators.py /builddir/build/BUILD/espresso/mpich/testsuite/python cd /builddir/build/BUILD/espresso/mpich/testsuite/python && /usr/bin/cmake -E copy /builddir/build/BUILD/espresso/testsuite/python/virtual_sites_tracers_common.py /builddir/build/BUILD/espresso/mpich/testsuite/python cd /builddir/build/BUILD/espresso/mpich/testsuite/python && /usr/bin/cmake -E copy /builddir/build/BUILD/espresso/testsuite/python/ek_common.py /builddir/build/BUILD/espresso/mpich/testsuite/python cd /builddir/build/BUILD/espresso/mpich/testsuite/python && /usr/bin/cmake -E copy /builddir/build/BUILD/espresso/testsuite/python/ek_eof_one_species_base.py /builddir/build/BUILD/espresso/mpich/testsuite/python make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' [100%] Built target python_test_data make -f testsuite/python/CMakeFiles/check_python.dir/build.make testsuite/python/CMakeFiles/check_python.dir/depend make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/espresso /builddir/build/BUILD/espresso/testsuite/python /builddir/build/BUILD/espresso/mpich /builddir/build/BUILD/espresso/mpich/testsuite/python /builddir/build/BUILD/espresso/mpich/testsuite/python/CMakeFiles/check_python.dir/DependInfo.cmake --color= Scanning dependencies of target check_python make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' make -f testsuite/python/CMakeFiles/check_python.dir/build.make testsuite/python/CMakeFiles/check_python.dir/build make[3]: Entering directory '/builddir/build/BUILD/espresso/mpich' cd /builddir/build/BUILD/espresso/mpich/testsuite/python && /usr/bin/ctest --timeout 300 -j4 --output-on-failure Test project /builddir/build/BUILD/espresso/mpich/testsuite/python Start 1: save_checkpoint_lb.cpu-p3m.cpu-lj-therm.lb_1 1/146 Test #1: save_checkpoint_lb.cpu-p3m.cpu-lj-therm.lb_1 ......***Failed 1.03 sec /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. =================================================================================== = BAD TERMINATION OF ONE OF YOUR APPLICATION PROCESSES = PID 4143224 RUNNING AT buildvm-17.phx2.fedoraproject.org = EXIT CODE: 134 = CLEANING UP REMAINING PROCESSES = YOU CAN IGNORE THE BELOW CLEANUP MESSAGES =================================================================================== YOUR APPLICATION TERMINATED WITH THE EXIT STRING: Aborted (signal 6) This typically refers to a problem with your application. Please see the FAQ page for debugging suggestions Start 3: save_checkpoint_lb.cpu-p3m.cpu-lj-therm.lb_0 2/146 Test #3: save_checkpoint_lb.cpu-p3m.cpu-lj-therm.lb_0 ......***Failed 1.01 sec /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. =================================================================================== = BAD TERMINATION OF ONE OF YOUR APPLICATION PROCESSES = PID 4143258 RUNNING AT buildvm-17.phx2.fedoraproject.org = EXIT CODE: 134 = CLEANING UP REMAINING PROCESSES = YOU CAN IGNORE THE BELOW CLEANUP MESSAGES =================================================================================== YOUR APPLICATION TERMINATED WITH THE EXIT STRING: Aborted (signal 6) This typically refers to a problem with your application. Please see the FAQ page for debugging suggestions Start 5: save_checkpoint_lb.gpu-p3m.cpu-lj-therm.lb_1 3/146 Test #5: save_checkpoint_lb.gpu-p3m.cpu-lj-therm.lb_1 ......***Failed 0.92 sec /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. =================================================================================== = BAD TERMINATION OF ONE OF YOUR APPLICATION PROCESSES = PID 4143309 RUNNING AT buildvm-17.phx2.fedoraproject.org = EXIT CODE: 134 = CLEANING UP REMAINING PROCESSES = YOU CAN IGNORE THE BELOW CLEANUP MESSAGES =================================================================================== YOUR APPLICATION TERMINATED WITH THE EXIT STRING: Aborted (signal 6) This typically refers to a problem with your application. Please see the FAQ page for debugging suggestions Start 7: save_checkpoint_lb.gpu-p3m.cpu-lj-therm.lb_0 4/146 Test #7: save_checkpoint_lb.gpu-p3m.cpu-lj-therm.lb_0 ......***Failed 0.97 sec /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. =================================================================================== = BAD TERMINATION OF ONE OF YOUR APPLICATION PROCESSES = PID 4143356 RUNNING AT buildvm-17.phx2.fedoraproject.org = EXIT CODE: 134 = CLEANING UP REMAINING PROCESSES = YOU CAN IGNORE THE BELOW CLEANUP MESSAGES =================================================================================== YOUR APPLICATION TERMINATED WITH THE EXIT STRING: Aborted (signal 6) This typically refers to a problem with your application. Please see the FAQ page for debugging suggestions Start 9: save_checkpoint_ek.gpu_1 5/146 Test #9: save_checkpoint_ek.gpu_1 ..........................***Failed 0.97 sec /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. =================================================================================== = BAD TERMINATION OF ONE OF YOUR APPLICATION PROCESSES = PID 4143407 RUNNING AT buildvm-17.phx2.fedoraproject.org = EXIT CODE: 134 = CLEANING UP REMAINING PROCESSES = YOU CAN IGNORE THE BELOW CLEANUP MESSAGES =================================================================================== YOUR APPLICATION TERMINATED WITH THE EXIT STRING: Aborted (signal 6) This typically refers to a problem with your application. Please see the FAQ page for debugging suggestions Start 11: save_checkpoint_ek.gpu_0 6/146 Test #11: save_checkpoint_ek.gpu_0 ..........................***Failed 0.93 sec /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. =================================================================================== = BAD TERMINATION OF ONE OF YOUR APPLICATION PROCESSES = PID 4143452 RUNNING AT buildvm-17.phx2.fedoraproject.org = EXIT CODE: 134 = CLEANING UP REMAINING PROCESSES = YOU CAN IGNORE THE BELOW CLEANUP MESSAGES =================================================================================== YOUR APPLICATION TERMINATED WITH THE EXIT STRING: Aborted (signal 6) This typically refers to a problem with your application. Please see the FAQ page for debugging suggestions Start 13: save_checkpoint_lb.off-therm.npt-int.npt_1 7/146 Test #13: save_checkpoint_lb.off-therm.npt-int.npt_1 ........***Failed 1.01 sec /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. =================================================================================== = BAD TERMINATION OF ONE OF YOUR APPLICATION PROCESSES = PID 4143497 RUNNING AT buildvm-17.phx2.fedoraproject.org = EXIT CODE: 134 = CLEANING UP REMAINING PROCESSES = YOU CAN IGNORE THE BELOW CLEANUP MESSAGES =================================================================================== YOUR APPLICATION TERMINATED WITH THE EXIT STRING: Aborted (signal 6) This typically refers to a problem with your application. Please see the FAQ page for debugging suggestions Start 15: save_checkpoint_lb.off-therm.langevin-int.nvt_1 8/146 Test #15: save_checkpoint_lb.off-therm.langevin-int.nvt_1 ...***Failed 0.98 sec /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. =================================================================================== = BAD TERMINATION OF ONE OF YOUR APPLICATION PROCESSES = PID 4143547 RUNNING AT buildvm-17.phx2.fedoraproject.org = EXIT CODE: 134 = CLEANING UP REMAINING PROCESSES = YOU CAN IGNORE THE BELOW CLEANUP MESSAGES =================================================================================== YOUR APPLICATION TERMINATED WITH THE EXIT STRING: Aborted (signal 6) This typically refers to a problem with your application. Please see the FAQ page for debugging suggestions Start 17: save_checkpoint_lb.off-therm.dpd-int.sd_1 9/146 Test #17: save_checkpoint_lb.off-therm.dpd-int.sd_1 .........***Failed 0.91 sec /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. =================================================================================== = BAD TERMINATION OF ONE OF YOUR APPLICATION PROCESSES = PID 4143593 RUNNING AT buildvm-17.phx2.fedoraproject.org = EXIT CODE: 134 = CLEANING UP REMAINING PROCESSES = YOU CAN IGNORE THE BELOW CLEANUP MESSAGES =================================================================================== YOUR APPLICATION TERMINATED WITH THE EXIT STRING: Aborted (signal 6) This typically refers to a problem with your application. Please see the FAQ page for debugging suggestions Start 2: test_checkpoint_lb.cpu-p3m.cpu-lj-therm.lb_1 10/146 Test #2: test_checkpoint_lb.cpu-p3m.cpu-lj-therm.lb_1 ......***Failed 0.43 sec E ====================================================================== ERROR: setUpClass (__main__.CheckpointTest) ---------------------------------------------------------------------- Traceback (most recent call last): File "/builddir/build/BUILD/espresso/mpich/testsuite/python/test_checkpoint_lb.cpu-p3m.cpu-lj-therm.lb_1.py", line 46, in setUpClass cls.checkpoint.load(0) File "/builddir/build/BUILD/espresso/mpich/src/python/espressomd/checkpointing.py", line 232, in load with open(filename, "rb") as f: FileNotFoundError: [Errno 2] No such file or directory: '/builddir/build/BUILD/espresso/mpich/testsuite/python/mycheckpoint_lb__cpu-p3m__cpu-lj-therm__lb_1/0.checkpoint' ---------------------------------------------------------------------- Ran 0 tests in 0.014s FAILED (errors=1) Start 4: test_checkpoint_lb.cpu-p3m.cpu-lj-therm.lb_0 11/146 Test #4: test_checkpoint_lb.cpu-p3m.cpu-lj-therm.lb_0 ......***Failed 0.39 sec E ====================================================================== ERROR: setUpClass (__main__.CheckpointTest) ---------------------------------------------------------------------- Traceback (most recent call last): File "/builddir/build/BUILD/espresso/mpich/testsuite/python/test_checkpoint_lb.cpu-p3m.cpu-lj-therm.lb_0.py", line 46, in setUpClass cls.checkpoint.load(0) File "/builddir/build/BUILD/espresso/mpich/src/python/espressomd/checkpointing.py", line 232, in load with open(filename, "rb") as f: FileNotFoundError: [Errno 2] No such file or directory: '/builddir/build/BUILD/espresso/mpich/testsuite/python/mycheckpoint_lb__cpu-p3m__cpu-lj-therm__lb_0/0.checkpoint' ---------------------------------------------------------------------- Ran 0 tests in 0.014s FAILED (errors=1) Start 6: test_checkpoint_lb.gpu-p3m.cpu-lj-therm.lb_1 12/146 Test #6: test_checkpoint_lb.gpu-p3m.cpu-lj-therm.lb_1 ......***Failed 0.39 sec E ====================================================================== ERROR: setUpClass (__main__.CheckpointTest) ---------------------------------------------------------------------- Traceback (most recent call last): File "/builddir/build/BUILD/espresso/mpich/testsuite/python/test_checkpoint_lb.gpu-p3m.cpu-lj-therm.lb_1.py", line 46, in setUpClass cls.checkpoint.load(0) File "/builddir/build/BUILD/espresso/mpich/src/python/espressomd/checkpointing.py", line 232, in load with open(filename, "rb") as f: FileNotFoundError: [Errno 2] No such file or directory: '/builddir/build/BUILD/espresso/mpich/testsuite/python/mycheckpoint_lb__gpu-p3m__cpu-lj-therm__lb_1/0.checkpoint' ---------------------------------------------------------------------- Ran 0 tests in 0.014s FAILED (errors=1) Start 8: test_checkpoint_lb.gpu-p3m.cpu-lj-therm.lb_0 13/146 Test #8: test_checkpoint_lb.gpu-p3m.cpu-lj-therm.lb_0 ......***Failed 0.40 sec E ====================================================================== ERROR: setUpClass (__main__.CheckpointTest) ---------------------------------------------------------------------- Traceback (most recent call last): File "/builddir/build/BUILD/espresso/mpich/testsuite/python/test_checkpoint_lb.gpu-p3m.cpu-lj-therm.lb_0.py", line 46, in setUpClass cls.checkpoint.load(0) File "/builddir/build/BUILD/espresso/mpich/src/python/espressomd/checkpointing.py", line 232, in load with open(filename, "rb") as f: FileNotFoundError: [Errno 2] No such file or directory: '/builddir/build/BUILD/espresso/mpich/testsuite/python/mycheckpoint_lb__gpu-p3m__cpu-lj-therm__lb_0/0.checkpoint' ---------------------------------------------------------------------- Ran 0 tests in 0.014s FAILED (errors=1) Start 10: test_checkpoint_ek.gpu_1 14/146 Test #10: test_checkpoint_ek.gpu_1 ..........................***Failed 0.40 sec E ====================================================================== ERROR: setUpClass (__main__.CheckpointTest) ---------------------------------------------------------------------- Traceback (most recent call last): File "/builddir/build/BUILD/espresso/mpich/testsuite/python/test_checkpoint_ek.gpu_1.py", line 46, in setUpClass cls.checkpoint.load(0) File "/builddir/build/BUILD/espresso/mpich/src/python/espressomd/checkpointing.py", line 232, in load with open(filename, "rb") as f: FileNotFoundError: [Errno 2] No such file or directory: '/builddir/build/BUILD/espresso/mpich/testsuite/python/mycheckpoint_ek__gpu_1/0.checkpoint' ---------------------------------------------------------------------- Ran 0 tests in 0.013s FAILED (errors=1) Start 12: test_checkpoint_ek.gpu_0 15/146 Test #12: test_checkpoint_ek.gpu_0 ..........................***Failed 0.40 sec E ====================================================================== ERROR: setUpClass (__main__.CheckpointTest) ---------------------------------------------------------------------- Traceback (most recent call last): File "/builddir/build/BUILD/espresso/mpich/testsuite/python/test_checkpoint_ek.gpu_0.py", line 46, in setUpClass cls.checkpoint.load(0) File "/builddir/build/BUILD/espresso/mpich/src/python/espressomd/checkpointing.py", line 232, in load with open(filename, "rb") as f: FileNotFoundError: [Errno 2] No such file or directory: '/builddir/build/BUILD/espresso/mpich/testsuite/python/mycheckpoint_ek__gpu_0/0.checkpoint' ---------------------------------------------------------------------- Ran 0 tests in 0.013s FAILED (errors=1) Start 14: test_checkpoint_lb.off-therm.npt-int.npt_1 16/146 Test #14: test_checkpoint_lb.off-therm.npt-int.npt_1 ........***Failed 0.43 sec E ====================================================================== ERROR: setUpClass (__main__.CheckpointTest) ---------------------------------------------------------------------- Traceback (most recent call last): File "/builddir/build/BUILD/espresso/mpich/testsuite/python/test_checkpoint_lb.off-therm.npt-int.npt_1.py", line 46, in setUpClass cls.checkpoint.load(0) File "/builddir/build/BUILD/espresso/mpich/src/python/espressomd/checkpointing.py", line 232, in load with open(filename, "rb") as f: FileNotFoundError: [Errno 2] No such file or directory: '/builddir/build/BUILD/espresso/mpich/testsuite/python/mycheckpoint_lb__off-therm__npt-int__npt_1/0.checkpoint' ---------------------------------------------------------------------- Ran 0 tests in 0.014s FAILED (errors=1) Start 16: test_checkpoint_lb.off-therm.langevin-int.nvt_1 17/146 Test #16: test_checkpoint_lb.off-therm.langevin-int.nvt_1 ...***Failed 0.41 sec E ====================================================================== ERROR: setUpClass (__main__.CheckpointTest) ---------------------------------------------------------------------- Traceback (most recent call last): File "/builddir/build/BUILD/espresso/mpich/testsuite/python/test_checkpoint_lb.off-therm.langevin-int.nvt_1.py", line 46, in setUpClass cls.checkpoint.load(0) File "/builddir/build/BUILD/espresso/mpich/src/python/espressomd/checkpointing.py", line 232, in load with open(filename, "rb") as f: FileNotFoundError: [Errno 2] No such file or directory: '/builddir/build/BUILD/espresso/mpich/testsuite/python/mycheckpoint_lb__off-therm__langevin-int__nvt_1/0.checkpoint' ---------------------------------------------------------------------- Ran 0 tests in 0.015s FAILED (errors=1) Start 18: test_checkpoint_lb.off-therm.dpd-int.sd_1 18/146 Test #18: test_checkpoint_lb.off-therm.dpd-int.sd_1 .........***Failed 0.44 sec E ====================================================================== ERROR: setUpClass (__main__.CheckpointTest) ---------------------------------------------------------------------- Traceback (most recent call last): File "/builddir/build/BUILD/espresso/mpich/testsuite/python/test_checkpoint_lb.off-therm.dpd-int.sd_1.py", line 46, in setUpClass cls.checkpoint.load(0) File "/builddir/build/BUILD/espresso/mpich/src/python/espressomd/checkpointing.py", line 232, in load with open(filename, "rb") as f: FileNotFoundError: [Errno 2] No such file or directory: '/builddir/build/BUILD/espresso/mpich/testsuite/python/mycheckpoint_lb__off-therm__dpd-int__sd_1/0.checkpoint' ---------------------------------------------------------------------- Ran 0 tests in 0.014s FAILED (errors=1) Start 19: cellsystem 19/146 Test #19: cellsystem ........................................***Failed 0.90 sec /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. =================================================================================== = BAD TERMINATION OF ONE OF YOUR APPLICATION PROCESSES = PID 4143888 RUNNING AT buildvm-17.phx2.fedoraproject.org = EXIT CODE: 134 = CLEANING UP REMAINING PROCESSES = YOU CAN IGNORE THE BELOW CLEANUP MESSAGES =================================================================================== YOUR APPLICATION TERMINATED WITH THE EXIT STRING: Aborted (signal 6) This typically refers to a problem with your application. Please see the FAQ page for debugging suggestions Start 20: tune_skin Start 22: constraint_shape_based Start 34: magnetostaticInteractions 20/146 Test #20: tune_skin ......................................... Passed 0.42 sec Start 53: rotational-diffusion-aniso 21/146 Test #34: magnetostaticInteractions ......................... Passed 0.43 sec Start 56: widom_insertion 22/146 Test #22: constraint_shape_based ............................***Failed 0.90 sec /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. =================================================================================== = BAD TERMINATION OF ONE OF YOUR APPLICATION PROCESSES = PID 4143925 RUNNING AT buildvm-17.phx2.fedoraproject.org = EXIT CODE: 134 = CLEANING UP REMAINING PROCESSES = YOU CAN IGNORE THE BELOW CLEANUP MESSAGES =================================================================================== YOUR APPLICATION TERMINATED WITH THE EXIT STRING: Aborted (signal 6) This typically refers to a problem with your application. Please see the FAQ page for debugging suggestions Start 29: electrostaticInteractions 23/146 Test #29: electrostaticInteractions .........................***Failed 0.83 sec /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. =================================================================================== = BAD TERMINATION OF ONE OF YOUR APPLICATION PROCESSES = PID 4143982 RUNNING AT buildvm-17.phx2.fedoraproject.org = EXIT CODE: 134 = CLEANING UP REMAINING PROCESSES = YOU CAN IGNORE THE BELOW CLEANUP MESSAGES =================================================================================== YOUR APPLICATION TERMINATED WITH THE EXIT STRING: Aborted (signal 6) This typically refers to a problem with your application. Please see the FAQ page for debugging suggestions Start 35: mass-and-rinertia_per_particle 24/146 Test #56: widom_insertion ................................... Passed 1.58 sec Start 66: langevin_thermostat 25/146 Test #35: mass-and-rinertia_per_particle ....................***Failed 1.01 sec /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. =================================================================================== = BAD TERMINATION OF ONE OF YOUR APPLICATION PROCESSES = PID 4144003 RUNNING AT buildvm-17.phx2.fedoraproject.org = EXIT CODE: 134 = CLEANING UP REMAINING PROCESSES = YOU CAN IGNORE THE BELOW CLEANUP MESSAGES =================================================================================== YOUR APPLICATION TERMINATED WITH THE EXIT STRING: Aborted (signal 6) This typically refers to a problem with your application. Please see the FAQ page for debugging suggestions Start 39: interactions_bonded 26/146 Test #53: rotational-diffusion-aniso ........................ Passed 2.75 sec Start 74: dipolar_mdlc_p3m_scafacos_p2nfft 27/146 Test #39: interactions_bonded ...............................***Failed 0.84 sec /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. =================================================================================== = BAD TERMINATION OF ONE OF YOUR APPLICATION PROCESSES = PID 4144032 RUNNING AT buildvm-17.phx2.fedoraproject.org = EXIT CODE: 134 = CLEANING UP REMAINING PROCESSES = YOU CAN IGNORE THE BELOW CLEANUP MESSAGES =================================================================================== YOUR APPLICATION TERMINATED WITH THE EXIT STRING: Aborted (signal 6) This typically refers to a problem with your application. Please see the FAQ page for debugging suggestions Start 48: tabulated 28/146 Test #48: tabulated .........................................***Failed 0.88 sec /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. =================================================================================== = BAD TERMINATION OF ONE OF YOUR APPLICATION PROCESSES = PID 4144061 RUNNING AT buildvm-17.phx2.fedoraproject.org = EXIT CODE: 134 = CLEANING UP REMAINING PROCESSES = YOU CAN IGNORE THE BELOW CLEANUP MESSAGES =================================================================================== YOUR APPLICATION TERMINATED WITH THE EXIT STRING: Aborted (signal 6) This typically refers to a problem with your application. Please see the FAQ page for debugging suggestions Start 65: exclusions 29/146 Test #65: exclusions ........................................***Failed 0.90 sec /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. =================================================================================== = BAD TERMINATION OF ONE OF YOUR APPLICATION PROCESSES = PID 4144082 RUNNING AT buildvm-17.phx2.fedoraproject.org = EXIT CODE: 134 = CLEANING UP REMAINING PROCESSES = YOU CAN IGNORE THE BELOW CLEANUP MESSAGES =================================================================================== YOUR APPLICATION TERMINATED WITH THE EXIT STRING: Aborted (signal 6) This typically refers to a problem with your application. Please see the FAQ page for debugging suggestions Start 68: virtual_sites_relative 30/146 Test #68: virtual_sites_relative ............................***Failed 0.93 sec /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. =================================================================================== = BAD TERMINATION OF ONE OF YOUR APPLICATION PROCESSES = PID 4144103 RUNNING AT buildvm-17.phx2.fedoraproject.org = EXIT CODE: 134 = CLEANING UP REMAINING PROCESSES = YOU CAN IGNORE THE BELOW CLEANUP MESSAGES =================================================================================== YOUR APPLICATION TERMINATED WITH THE EXIT STRING: Aborted (signal 6) This typically refers to a problem with your application. Please see the FAQ page for debugging suggestions Start 69: virtual_sites_tracers 31/146 Test #69: virtual_sites_tracers .............................***Failed 0.86 sec /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. =================================================================================== = BAD TERMINATION OF ONE OF YOUR APPLICATION PROCESSES = PID 4144125 RUNNING AT buildvm-17.phx2.fedoraproject.org = EXIT CODE: 134 = CLEANING UP REMAINING PROCESSES = YOU CAN IGNORE THE BELOW CLEANUP MESSAGES =================================================================================== YOUR APPLICATION TERMINATED WITH THE EXIT STRING: Aborted (signal 6) This typically refers to a problem with your application. Please see the FAQ page for debugging suggestions Start 76: force_cap 32/146 Test #76: force_cap .........................................***Failed 0.94 sec /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. =================================================================================== = BAD TERMINATION OF ONE OF YOUR APPLICATION PROCESSES = PID 4144146 RUNNING AT buildvm-17.phx2.fedoraproject.org = EXIT CODE: 134 = CLEANING UP REMAINING PROCESSES = YOU CAN IGNORE THE BELOW CLEANUP MESSAGES =================================================================================== YOUR APPLICATION TERMINATED WITH THE EXIT STRING: Aborted (signal 6) This typically refers to a problem with your application. Please see the FAQ page for debugging suggestions Start 79: analyze_energy 33/146 Test #79: analyze_energy ....................................***Failed 0.91 sec /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. =================================================================================== = BAD TERMINATION OF ONE OF YOUR APPLICATION PROCESSES = PID 4144167 RUNNING AT buildvm-17.phx2.fedoraproject.org = EXIT CODE: 134 = CLEANING UP REMAINING PROCESSES = YOU CAN IGNORE THE BELOW CLEANUP MESSAGES =================================================================================== YOUR APPLICATION TERMINATED WITH THE EXIT STRING: Aborted (signal 6) This typically refers to a problem with your application. Please see the FAQ page for debugging suggestions Start 81: rdf Start 89: auto_exclusions 34/146 Test #81: rdf ............................................... Passed 0.38 sec Start 93: analyze_chains 35/146 Test #89: auto_exclusions ................................... Passed 0.39 sec Start 94: analyze_distance 36/146 Test #93: analyze_chains .................................... Passed 0.32 sec Start 101: wang_landau_reaction_ensemble 37/146 Test #94: analyze_distance .................................. Passed 0.38 sec Start 103: analyze_distribution 38/146 Test #74: dipolar_mdlc_p3m_scafacos_p2nfft .................. Passed 6.84 sec Start 111: actor 39/146 Test #103: analyze_distribution .............................. Passed 0.33 sec Start 116: lb_boundary_velocity 40/146 Test #111: actor ............................................. Passed 0.33 sec Start 122: analyze_gyration_tensor 41/146 Test #116: lb_boundary_velocity .............................. Passed 0.63 sec Start 124: simple_pore 42/146 Test #122: analyze_gyration_tensor ........................... Passed 0.45 sec Start 125: field_test 43/146 Test #124: simple_pore ....................................... Passed 0.55 sec Start 133: sigint 44/146 Test #133: sigint ............................................ Passed 1.09 sec Start 134: lb_density 45/146 Test #134: lb_density ........................................ Passed 0.53 sec Start 138: features 46/146 Test #138: features .......................................... Passed 0.31 sec Start 140: time_series 47/146 Test #140: time_series ....................................... Passed 0.37 sec 48/146 Test #66: langevin_thermostat ............................... Passed 16.77 sec Start 90: subt_lj 49/146 Test #90: subt_lj ...........................................***Failed 0.91 sec /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. =================================================================================== = BAD TERMINATION OF ONE OF YOUR APPLICATION PROCESSES = PID 4144310 RUNNING AT buildvm-17.phx2.fedoraproject.org = EXIT CODE: 134 = CLEANING UP REMAINING PROCESSES = YOU CAN IGNORE THE BELOW CLEANUP MESSAGES =================================================================================== YOUR APPLICATION TERMINATED WITH THE EXIT STRING: Aborted (signal 6) This typically refers to a problem with your application. Please see the FAQ page for debugging suggestions Start 95: comfixed 50/146 Test #95: comfixed ..........................................***Failed 0.87 sec /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. =================================================================================== = BAD TERMINATION OF ONE OF YOUR APPLICATION PROCESSES = PID 4144326 RUNNING AT buildvm-17.phx2.fedoraproject.org = EXIT CODE: 134 = CLEANING UP REMAINING PROCESSES = YOU CAN IGNORE THE BELOW CLEANUP MESSAGES =================================================================================== YOUR APPLICATION TERMINATED WITH THE EXIT STRING: Aborted (signal 6) This typically refers to a problem with your application. Please see the FAQ page for debugging suggestions Start 96: rescale 51/146 Test #96: rescale ...........................................***Failed 0.83 sec /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. =================================================================================== = BAD TERMINATION OF ONE OF YOUR APPLICATION PROCESSES = PID 4144347 RUNNING AT buildvm-17.phx2.fedoraproject.org = EXIT CODE: 134 = CLEANING UP REMAINING PROCESSES = YOU CAN IGNORE THE BELOW CLEANUP MESSAGES =================================================================================== YOUR APPLICATION TERMINATED WITH THE EXIT STRING: Aborted (signal 6) This typically refers to a problem with your application. Please see the FAQ page for debugging suggestions Start 98: elc_vs_mmm2d_neutral 52/146 Test #125: field_test ........................................ Passed 10.76 sec 53/146 Test #98: elc_vs_mmm2d_neutral ..............................***Failed 0.83 sec /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. =================================================================================== = BAD TERMINATION OF ONE OF YOUR APPLICATION PROCESSES = PID 4144368 RUNNING AT buildvm-17.phx2.fedoraproject.org = EXIT CODE: 134 = CLEANING UP REMAINING PROCESSES = YOU CAN IGNORE THE BELOW CLEANUP MESSAGES =================================================================================== YOUR APPLICATION TERMINATED WITH THE EXIT STRING: Aborted (signal 6) This typically refers to a problem with your application. Please see the FAQ page for debugging suggestions Start 99: elc_vs_mmm2d_nonneutral 54/146 Test #99: elc_vs_mmm2d_nonneutral ...........................***Failed 0.82 sec /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. =================================================================================== = BAD TERMINATION OF ONE OF YOUR APPLICATION PROCESSES = PID 4144389 RUNNING AT buildvm-17.phx2.fedoraproject.org = EXIT CODE: 134 = CLEANING UP REMAINING PROCESSES = YOU CAN IGNORE THE BELOW CLEANUP MESSAGES =================================================================================== YOUR APPLICATION TERMINATED WITH THE EXIT STRING: Aborted (signal 6) This typically refers to a problem with your application. Please see the FAQ page for debugging suggestions Start 112: drude 55/146 Test #112: drude ............................................. Passed 0.36 sec Start 123: oif_volume_conservation 56/146 Test #123: oif_volume_conservation ........................... Passed 0.35 sec Start 132: p3m_electrostatic_pressure 57/146 Test #132: p3m_electrostatic_pressure ........................***Failed 0.85 sec /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. =================================================================================== = BAD TERMINATION OF ONE OF YOUR APPLICATION PROCESSES = PID 4144443 RUNNING AT buildvm-17.phx2.fedoraproject.org = EXIT CODE: 134 = CLEANING UP REMAINING PROCESSES = YOU CAN IGNORE THE BELOW CLEANUP MESSAGES =================================================================================== YOUR APPLICATION TERMINATED WITH THE EXIT STRING: Aborted (signal 6) This typically refers to a problem with your application. Please see the FAQ page for debugging suggestions Start 144: elc 58/146 Test #144: elc ...............................................***Failed 0.88 sec /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. =================================================================================== = BAD TERMINATION OF ONE OF YOUR APPLICATION PROCESSES = PID 4144459 RUNNING AT buildvm-17.phx2.fedoraproject.org = EXIT CODE: 134 = CLEANING UP REMAINING PROCESSES = YOU CAN IGNORE THE BELOW CLEANUP MESSAGES =================================================================================== YOUR APPLICATION TERMINATED WITH THE EXIT STRING: Aborted (signal 6) This typically refers to a problem with your application. Please see the FAQ page for debugging suggestions Start 145: elc_and_mmm2d_vs_analytic 59/146 Test #101: wang_landau_reaction_ensemble ..................... Passed 16.04 sec Start 146: h5md 60/146 Test #145: elc_and_mmm2d_vs_analytic .........................***Failed 0.89 sec /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. =================================================================================== = BAD TERMINATION OF ONE OF YOUR APPLICATION PROCESSES = PID 4144480 RUNNING AT buildvm-17.phx2.fedoraproject.org = EXIT CODE: 134 = CLEANING UP REMAINING PROCESSES = YOU CAN IGNORE THE BELOW CLEANUP MESSAGES =================================================================================== YOUR APPLICATION TERMINATED WITH THE EXIT STRING: Aborted (signal 6) This typically refers to a problem with your application. Please see the FAQ page for debugging suggestions 61/146 Test #146: h5md ..............................................***Failed 0.92 sec /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. =================================================================================== = BAD TERMINATION OF ONE OF YOUR APPLICATION PROCESSES = PID 4144499 RUNNING AT buildvm-17.phx2.fedoraproject.org = EXIT CODE: 134 = CLEANING UP REMAINING PROCESSES = YOU CAN IGNORE THE BELOW CLEANUP MESSAGES =================================================================================== YOUR APPLICATION TERMINATED WITH THE EXIT STRING: Aborted (signal 6) This typically refers to a problem with your application. Please see the FAQ page for debugging suggestions Start 21: constraint_homogeneous_magnetic_field 62/146 Test #21: constraint_homogeneous_magnetic_field .............***Failed 0.99 sec /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. =================================================================================== = BAD TERMINATION OF ONE OF YOUR APPLICATION PROCESSES = PID 4144523 RUNNING AT buildvm-17.phx2.fedoraproject.org = EXIT CODE: 134 = CLEANING UP REMAINING PROCESSES = YOU CAN IGNORE THE BELOW CLEANUP MESSAGES =================================================================================== YOUR APPLICATION TERMINATED WITH THE EXIT STRING: Aborted (signal 6) This typically refers to a problem with your application. Please see the FAQ page for debugging suggestions Start 23: coulomb_cloud_wall 63/146 Test #23: coulomb_cloud_wall ................................***Failed 0.98 sec /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. =================================================================================== = BAD TERMINATION OF ONE OF YOUR APPLICATION PROCESSES = PID 4144561 RUNNING AT buildvm-17.phx2.fedoraproject.org = EXIT CODE: 134 = CLEANING UP REMAINING PROCESSES = YOU CAN IGNORE THE BELOW CLEANUP MESSAGES =================================================================================== YOUR APPLICATION TERMINATED WITH THE EXIT STRING: Aborted (signal 6) This typically refers to a problem with your application. Please see the FAQ page for debugging suggestions Start 24: coulomb_tuning 64/146 Test #24: coulomb_tuning ....................................***Failed 1.00 sec /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. =================================================================================== = BAD TERMINATION OF ONE OF YOUR APPLICATION PROCESSES = PID 4144609 RUNNING AT buildvm-17.phx2.fedoraproject.org = EXIT CODE: 134 = CLEANING UP REMAINING PROCESSES = YOU CAN IGNORE THE BELOW CLEANUP MESSAGES =================================================================================== YOUR APPLICATION TERMINATED WITH THE EXIT STRING: Aborted (signal 6) This typically refers to a problem with your application. Please see the FAQ page for debugging suggestions Start 25: correlation 65/146 Test #25: correlation .......................................***Failed 0.94 sec /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. =================================================================================== = BAD TERMINATION OF ONE OF YOUR APPLICATION PROCESSES = PID 4144656 RUNNING AT buildvm-17.phx2.fedoraproject.org = EXIT CODE: 134 = CLEANING UP REMAINING PROCESSES = YOU CAN IGNORE THE BELOW CLEANUP MESSAGES =================================================================================== YOUR APPLICATION TERMINATED WITH THE EXIT STRING: Aborted (signal 6) This typically refers to a problem with your application. Please see the FAQ page for debugging suggestions Start 26: dawaanr-and-dds-gpu 66/146 Test #26: dawaanr-and-dds-gpu ............................... Passed 0.41 sec Start 27: dawaanr-and-bh-gpu 67/146 Test #27: dawaanr-and-bh-gpu ................................ Passed 0.28 sec Start 28: dds-and-bh-gpu 68/146 Test #28: dds-and-bh-gpu ....................................***Failed 0.94 sec /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. =================================================================================== = BAD TERMINATION OF ONE OF YOUR APPLICATION PROCESSES = PID 4144731 RUNNING AT buildvm-17.phx2.fedoraproject.org = EXIT CODE: 134 = CLEANING UP REMAINING PROCESSES = YOU CAN IGNORE THE BELOW CLEANUP MESSAGES =================================================================================== YOUR APPLICATION TERMINATED WITH THE EXIT STRING: Aborted (signal 6) This typically refers to a problem with your application. Please see the FAQ page for debugging suggestions Start 30: engine_langevin 69/146 Test #30: engine_langevin ...................................***Failed 1.01 sec /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. =================================================================================== = BAD TERMINATION OF ONE OF YOUR APPLICATION PROCESSES = PID 4144762 RUNNING AT buildvm-17.phx2.fedoraproject.org = EXIT CODE: 134 = CLEANING UP REMAINING PROCESSES = YOU CAN IGNORE THE BELOW CLEANUP MESSAGES =================================================================================== YOUR APPLICATION TERMINATED WITH THE EXIT STRING: Aborted (signal 6) This typically refers to a problem with your application. Please see the FAQ page for debugging suggestions Start 31: engine_lb 70/146 Test #31: engine_lb .........................................***Failed 0.87 sec /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. =================================================================================== = BAD TERMINATION OF ONE OF YOUR APPLICATION PROCESSES = PID 4144812 RUNNING AT buildvm-17.phx2.fedoraproject.org = EXIT CODE: 134 = CLEANING UP REMAINING PROCESSES = YOU CAN IGNORE THE BELOW CLEANUP MESSAGES =================================================================================== YOUR APPLICATION TERMINATED WITH THE EXIT STRING: Aborted (signal 6) This typically refers to a problem with your application. Please see the FAQ page for debugging suggestions Start 32: experimental_decorator 71/146 Test #32: experimental_decorator ............................ Passed 0.42 sec Start 33: icc 72/146 Test #33: icc ...............................................***Failed 0.97 sec /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. =================================================================================== = BAD TERMINATION OF ONE OF YOUR APPLICATION PROCESSES = PID 4144877 RUNNING AT buildvm-17.phx2.fedoraproject.org = EXIT CODE: 134 = CLEANING UP REMAINING PROCESSES = YOU CAN IGNORE THE BELOW CLEANUP MESSAGES =================================================================================== YOUR APPLICATION TERMINATED WITH THE EXIT STRING: Aborted (signal 6) This typically refers to a problem with your application. Please see the FAQ page for debugging suggestions Start 36: integrate 73/146 Test #36: integrate .........................................***Failed 0.99 sec /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. =================================================================================== = BAD TERMINATION OF ONE OF YOUR APPLICATION PROCESSES = PID 4144909 RUNNING AT buildvm-17.phx2.fedoraproject.org = EXIT CODE: 134 = CLEANING UP REMAINING PROCESSES = YOU CAN IGNORE THE BELOW CLEANUP MESSAGES =================================================================================== YOUR APPLICATION TERMINATED WITH THE EXIT STRING: Aborted (signal 6) This typically refers to a problem with your application. Please see the FAQ page for debugging suggestions Start 37: interactions_bond_angle 74/146 Test #37: interactions_bond_angle ...........................***Failed 1.06 sec /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. =================================================================================== = BAD TERMINATION OF ONE OF YOUR APPLICATION PROCESSES = PID 4144956 RUNNING AT buildvm-17.phx2.fedoraproject.org = EXIT CODE: 134 = CLEANING UP REMAINING PROCESSES = YOU CAN IGNORE THE BELOW CLEANUP MESSAGES =================================================================================== YOUR APPLICATION TERMINATED WITH THE EXIT STRING: Aborted (signal 6) This typically refers to a problem with your application. Please see the FAQ page for debugging suggestions Start 38: interactions_bonded_interface 75/146 Test #38: interactions_bonded_interface .....................***Failed 1.01 sec /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. =================================================================================== = BAD TERMINATION OF ONE OF YOUR APPLICATION PROCESSES = PID 4145001 RUNNING AT buildvm-17.phx2.fedoraproject.org = EXIT CODE: 134 = CLEANING UP REMAINING PROCESSES = YOU CAN IGNORE THE BELOW CLEANUP MESSAGES =================================================================================== YOUR APPLICATION TERMINATED WITH THE EXIT STRING: Aborted (signal 6) This typically refers to a problem with your application. Please see the FAQ page for debugging suggestions Start 40: interactions_dihedral 76/146 Test #40: interactions_dihedral .............................***Failed 0.98 sec /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. =================================================================================== = BAD TERMINATION OF ONE OF YOUR APPLICATION PROCESSES = PID 4145049 RUNNING AT buildvm-17.phx2.fedoraproject.org = EXIT CODE: 134 = CLEANING UP REMAINING PROCESSES = YOU CAN IGNORE THE BELOW CLEANUP MESSAGES =================================================================================== YOUR APPLICATION TERMINATED WITH THE EXIT STRING: Aborted (signal 6) This typically refers to a problem with your application. Please see the FAQ page for debugging suggestions Start 41: interactions_non-bonded_interface 77/146 Test #41: interactions_non-bonded_interface .................***Failed 0.97 sec /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. =================================================================================== = BAD TERMINATION OF ONE OF YOUR APPLICATION PROCESSES = PID 4145097 RUNNING AT buildvm-17.phx2.fedoraproject.org = EXIT CODE: 134 = CLEANING UP REMAINING PROCESSES = YOU CAN IGNORE THE BELOW CLEANUP MESSAGES =================================================================================== YOUR APPLICATION TERMINATED WITH THE EXIT STRING: Aborted (signal 6) This typically refers to a problem with your application. Please see the FAQ page for debugging suggestions Start 42: interactions_non-bonded 78/146 Test #42: interactions_non-bonded ...........................***Failed 1.00 sec /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. =================================================================================== = BAD TERMINATION OF ONE OF YOUR APPLICATION PROCESSES = PID 4145144 RUNNING AT buildvm-17.phx2.fedoraproject.org = EXIT CODE: 134 = CLEANING UP REMAINING PROCESSES = YOU CAN IGNORE THE BELOW CLEANUP MESSAGES =================================================================================== YOUR APPLICATION TERMINATED WITH THE EXIT STRING: Aborted (signal 6) This typically refers to a problem with your application. Please see the FAQ page for debugging suggestions Start 43: observables 79/146 Test #43: observables .......................................***Failed 0.92 sec /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. =================================================================================== = BAD TERMINATION OF ONE OF YOUR APPLICATION PROCESSES = PID 4145189 RUNNING AT buildvm-17.phx2.fedoraproject.org = EXIT CODE: 134 = CLEANING UP REMAINING PROCESSES = YOU CAN IGNORE THE BELOW CLEANUP MESSAGES =================================================================================== YOUR APPLICATION TERMINATED WITH THE EXIT STRING: Aborted (signal 6) This typically refers to a problem with your application. Please see the FAQ page for debugging suggestions Start 44: p3m_gpu 80/146 Test #44: p3m_gpu ........................................... Passed 0.48 sec Start 45: particle 81/146 Test #45: particle ..........................................***Failed 0.97 sec /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. =================================================================================== = BAD TERMINATION OF ONE OF YOUR APPLICATION PROCESSES = PID 4145278 RUNNING AT buildvm-17.phx2.fedoraproject.org = EXIT CODE: 134 = CLEANING UP REMAINING PROCESSES = YOU CAN IGNORE THE BELOW CLEANUP MESSAGES =================================================================================== YOUR APPLICATION TERMINATED WITH THE EXIT STRING: Aborted (signal 6) This typically refers to a problem with your application. Please see the FAQ page for debugging suggestions Start 46: stress 82/146 Test #46: stress ............................................***Failed 1.10 sec /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. =================================================================================== = BAD TERMINATION OF ONE OF YOUR APPLICATION PROCESSES = PID 4145308 RUNNING AT buildvm-17.phx2.fedoraproject.org = EXIT CODE: 134 = CLEANING UP REMAINING PROCESSES = YOU CAN IGNORE THE BELOW CLEANUP MESSAGES =================================================================================== YOUR APPLICATION TERMINATED WITH THE EXIT STRING: Aborted (signal 6) This typically refers to a problem with your application. Please see the FAQ page for debugging suggestions Start 47: scafacos_dipoles_1d_2d 83/146 Test #47: scafacos_dipoles_1d_2d ............................ Passed 0.51 sec Start 49: particle_slice 84/146 Test #49: particle_slice ....................................***Failed 0.99 sec /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. =================================================================================== = BAD TERMINATION OF ONE OF YOUR APPLICATION PROCESSES = PID 4145396 RUNNING AT buildvm-17.phx2.fedoraproject.org = EXIT CODE: 134 = CLEANING UP REMAINING PROCESSES = YOU CAN IGNORE THE BELOW CLEANUP MESSAGES =================================================================================== YOUR APPLICATION TERMINATED WITH THE EXIT STRING: Aborted (signal 6) This typically refers to a problem with your application. Please see the FAQ page for debugging suggestions Start 50: rigid_bond 85/146 Test #50: rigid_bond ........................................***Failed 1.02 sec /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. =================================================================================== = BAD TERMINATION OF ONE OF YOUR APPLICATION PROCESSES = PID 4145429 RUNNING AT buildvm-17.phx2.fedoraproject.org = EXIT CODE: 134 = CLEANING UP REMAINING PROCESSES = YOU CAN IGNORE THE BELOW CLEANUP MESSAGES =================================================================================== YOUR APPLICATION TERMINATED WITH THE EXIT STRING: Aborted (signal 6) This typically refers to a problem with your application. Please see the FAQ page for debugging suggestions Start 51: rotation_per_particle 86/146 Test #51: rotation_per_particle .............................***Failed 1.00 sec /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. =================================================================================== = BAD TERMINATION OF ONE OF YOUR APPLICATION PROCESSES = PID 4145474 RUNNING AT buildvm-17.phx2.fedoraproject.org = EXIT CODE: 134 = CLEANING UP REMAINING PROCESSES = YOU CAN IGNORE THE BELOW CLEANUP MESSAGES =================================================================================== YOUR APPLICATION TERMINATED WITH THE EXIT STRING: Aborted (signal 6) This typically refers to a problem with your application. Please see the FAQ page for debugging suggestions Start 52: rotational_inertia 87/146 Test #52: rotational_inertia ................................***Failed 0.99 sec /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. =================================================================================== = BAD TERMINATION OF ONE OF YOUR APPLICATION PROCESSES = PID 4145520 RUNNING AT buildvm-17.phx2.fedoraproject.org = EXIT CODE: 134 = CLEANING UP REMAINING PROCESSES = YOU CAN IGNORE THE BELOW CLEANUP MESSAGES =================================================================================== YOUR APPLICATION TERMINATED WITH THE EXIT STRING: Aborted (signal 6) This typically refers to a problem with your application. Please see the FAQ page for debugging suggestions Start 54: script_interface_object_params 88/146 Test #54: script_interface_object_params .................... Passed 0.55 sec Start 55: reaction_ensemble 89/146 Test #55: reaction_ensemble .................................***Failed 1.03 sec /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. =================================================================================== = BAD TERMINATION OF ONE OF YOUR APPLICATION PROCESSES = PID 4145609 RUNNING AT buildvm-17.phx2.fedoraproject.org = EXIT CODE: 134 = CLEANING UP REMAINING PROCESSES = YOU CAN IGNORE THE BELOW CLEANUP MESSAGES =================================================================================== YOUR APPLICATION TERMINATED WITH THE EXIT STRING: Aborted (signal 6) This typically refers to a problem with your application. Please see the FAQ page for debugging suggestions Start 57: constant_pH 90/146 Test #57: constant_pH .......................................***Failed 1.01 sec /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. =================================================================================== = BAD TERMINATION OF ONE OF YOUR APPLICATION PROCESSES = PID 4145639 RUNNING AT buildvm-17.phx2.fedoraproject.org = EXIT CODE: 134 = CLEANING UP REMAINING PROCESSES = YOU CAN IGNORE THE BELOW CLEANUP MESSAGES =================================================================================== YOUR APPLICATION TERMINATED WITH THE EXIT STRING: Aborted (signal 6) This typically refers to a problem with your application. Please see the FAQ page for debugging suggestions Start 58: writevtf 91/146 Test #58: writevtf ..........................................***Failed 1.59 sec /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. =================================================================================== = BAD TERMINATION OF ONE OF YOUR APPLICATION PROCESSES = PID 4145685 RUNNING AT buildvm-17.phx2.fedoraproject.org = EXIT CODE: 134 = CLEANING UP REMAINING PROCESSES = YOU CAN IGNORE THE BELOW CLEANUP MESSAGES =================================================================================== YOUR APPLICATION TERMINATED WITH THE EXIT STRING: Aborted (signal 6) This typically refers to a problem with your application. Please see the FAQ page for debugging suggestions Start 59: lb_stokes_sphere 92/146 Test #59: lb_stokes_sphere ..................................***Failed 1.20 sec /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. =================================================================================== = BAD TERMINATION OF ONE OF YOUR APPLICATION PROCESSES = PID 4145732 RUNNING AT buildvm-17.phx2.fedoraproject.org = EXIT CODE: 134 = CLEANING UP REMAINING PROCESSES = YOU CAN IGNORE THE BELOW CLEANUP MESSAGES =================================================================================== YOUR APPLICATION TERMINATED WITH THE EXIT STRING: Aborted (signal 6) This typically refers to a problem with your application. Please see the FAQ page for debugging suggestions Start 60: ek_fluctuations 93/146 Test #60: ek_fluctuations ................................... Passed 0.30 sec Start 61: ek_charged_plate 94/146 Test #61: ek_charged_plate .................................. Passed 0.28 sec Start 62: ek_eof_one_species_x 95/146 Test #62: ek_eof_one_species_x .............................. Passed 0.37 sec Start 63: ek_eof_one_species_y 96/146 Test #63: ek_eof_one_species_y .............................. Passed 0.30 sec Start 64: ek_eof_one_species_z 97/146 Test #64: ek_eof_one_species_z .............................. Passed 0.33 sec Start 67: nsquare 98/146 Test #67: nsquare ...........................................***Failed 1.06 sec /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. =================================================================================== = BAD TERMINATION OF ONE OF YOUR APPLICATION PROCESSES = PID 4145835 RUNNING AT buildvm-17.phx2.fedoraproject.org = EXIT CODE: 134 = CLEANING UP REMAINING PROCESSES = YOU CAN IGNORE THE BELOW CLEANUP MESSAGES =================================================================================== YOUR APPLICATION TERMINATED WITH THE EXIT STRING: Aborted (signal 6) This typically refers to a problem with your application. Please see the FAQ page for debugging suggestions Start 70: virtual_sites_tracers_gpu 99/146 Test #70: virtual_sites_tracers_gpu .........................***Failed 0.89 sec /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. =================================================================================== = BAD TERMINATION OF ONE OF YOUR APPLICATION PROCESSES = PID 4145867 RUNNING AT buildvm-17.phx2.fedoraproject.org = EXIT CODE: 134 = CLEANING UP REMAINING PROCESSES = YOU CAN IGNORE THE BELOW CLEANUP MESSAGES =================================================================================== YOUR APPLICATION TERMINATED WITH THE EXIT STRING: Aborted (signal 6) This typically refers to a problem with your application. Please see the FAQ page for debugging suggestions Start 71: domain_decomposition 100/146 Test #71: domain_decomposition ..............................***Failed 0.94 sec /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. =================================================================================== = BAD TERMINATION OF ONE OF YOUR APPLICATION PROCESSES = PID 4145897 RUNNING AT buildvm-17.phx2.fedoraproject.org = EXIT CODE: 134 = CLEANING UP REMAINING PROCESSES = YOU CAN IGNORE THE BELOW CLEANUP MESSAGES =================================================================================== YOUR APPLICATION TERMINATED WITH THE EXIT STRING: Aborted (signal 6) This typically refers to a problem with your application. Please see the FAQ page for debugging suggestions Start 72: layered 101/146 Test #72: layered ...........................................***Failed 0.92 sec /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. =================================================================================== = BAD TERMINATION OF ONE OF YOUR APPLICATION PROCESSES = PID 4145933 RUNNING AT buildvm-17.phx2.fedoraproject.org = EXIT CODE: 134 = CLEANING UP REMAINING PROCESSES = YOU CAN IGNORE THE BELOW CLEANUP MESSAGES =================================================================================== YOUR APPLICATION TERMINATED WITH THE EXIT STRING: Aborted (signal 6) This typically refers to a problem with your application. Please see the FAQ page for debugging suggestions Start 73: minimize_energy 102/146 Test #73: minimize_energy ...................................***Failed 0.95 sec /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. =================================================================================== = BAD TERMINATION OF ONE OF YOUR APPLICATION PROCESSES = PID 4145982 RUNNING AT buildvm-17.phx2.fedoraproject.org = EXIT CODE: 134 = CLEANING UP REMAINING PROCESSES = YOU CAN IGNORE THE BELOW CLEANUP MESSAGES =================================================================================== YOUR APPLICATION TERMINATED WITH THE EXIT STRING: Aborted (signal 6) This typically refers to a problem with your application. Please see the FAQ page for debugging suggestions Start 75: lb 103/146 Test #75: lb ................................................***Failed 0.90 sec /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. =================================================================================== = BAD TERMINATION OF ONE OF YOUR APPLICATION PROCESSES = PID 4146027 RUNNING AT buildvm-17.phx2.fedoraproject.org = EXIT CODE: 134 = CLEANING UP REMAINING PROCESSES = YOU CAN IGNORE THE BELOW CLEANUP MESSAGES =================================================================================== YOUR APPLICATION TERMINATED WITH THE EXIT STRING: Aborted (signal 6) This typically refers to a problem with your application. Please see the FAQ page for debugging suggestions Start 77: dpd 104/146 Test #77: dpd ...............................................***Failed 0.85 sec /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. =================================================================================== = BAD TERMINATION OF ONE OF YOUR APPLICATION PROCESSES = PID 4146059 RUNNING AT buildvm-17.phx2.fedoraproject.org = EXIT CODE: 134 = CLEANING UP REMAINING PROCESSES = YOU CAN IGNORE THE BELOW CLEANUP MESSAGES =================================================================================== YOUR APPLICATION TERMINATED WITH THE EXIT STRING: Aborted (signal 6) This typically refers to a problem with your application. Please see the FAQ page for debugging suggestions Start 78: hat 105/146 Test #78: hat ...............................................***Failed 0.85 sec /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. =================================================================================== = BAD TERMINATION OF ONE OF YOUR APPLICATION PROCESSES = PID 4146097 RUNNING AT buildvm-17.phx2.fedoraproject.org = EXIT CODE: 134 = CLEANING UP REMAINING PROCESSES = YOU CAN IGNORE THE BELOW CLEANUP MESSAGES =================================================================================== YOUR APPLICATION TERMINATED WITH THE EXIT STRING: Aborted (signal 6) This typically refers to a problem with your application. Please see the FAQ page for debugging suggestions Start 80: analyze_mass_related 106/146 Test #80: analyze_mass_related ..............................***Failed 0.94 sec /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. =================================================================================== = BAD TERMINATION OF ONE OF YOUR APPLICATION PROCESSES = PID 4146142 RUNNING AT buildvm-17.phx2.fedoraproject.org = EXIT CODE: 134 = CLEANING UP REMAINING PROCESSES = YOU CAN IGNORE THE BELOW CLEANUP MESSAGES =================================================================================== YOUR APPLICATION TERMINATED WITH THE EXIT STRING: Aborted (signal 6) This typically refers to a problem with your application. Please see the FAQ page for debugging suggestions Start 82: coulomb_mixed_periodicity 107/146 Test #82: coulomb_mixed_periodicity .........................***Failed 0.91 sec /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. =================================================================================== = BAD TERMINATION OF ONE OF YOUR APPLICATION PROCESSES = PID 4146189 RUNNING AT buildvm-17.phx2.fedoraproject.org = EXIT CODE: 134 = CLEANING UP REMAINING PROCESSES = YOU CAN IGNORE THE BELOW CLEANUP MESSAGES =================================================================================== YOUR APPLICATION TERMINATED WITH THE EXIT STRING: Aborted (signal 6) This typically refers to a problem with your application. Please see the FAQ page for debugging suggestions Start 83: coulomb_cloud_wall_duplicated 108/146 Test #83: coulomb_cloud_wall_duplicated .....................***Failed 0.89 sec /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. =================================================================================== = BAD TERMINATION OF ONE OF YOUR APPLICATION PROCESSES = PID 4146238 RUNNING AT buildvm-17.phx2.fedoraproject.org = EXIT CODE: 134 = CLEANING UP REMAINING PROCESSES = YOU CAN IGNORE THE BELOW CLEANUP MESSAGES =================================================================================== YOUR APPLICATION TERMINATED WITH THE EXIT STRING: Aborted (signal 6) This typically refers to a problem with your application. Please see the FAQ page for debugging suggestions Start 84: collision_detection 109/146 Test #84: collision_detection ...............................***Failed 0.89 sec /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. =================================================================================== = BAD TERMINATION OF ONE OF YOUR APPLICATION PROCESSES = PID 4146283 RUNNING AT buildvm-17.phx2.fedoraproject.org = EXIT CODE: 134 = CLEANING UP REMAINING PROCESSES = YOU CAN IGNORE THE BELOW CLEANUP MESSAGES =================================================================================== YOUR APPLICATION TERMINATED WITH THE EXIT STRING: Aborted (signal 6) This typically refers to a problem with your application. Please see the FAQ page for debugging suggestions Start 85: lb_get_u_at_pos 110/146 Test #85: lb_get_u_at_pos ................................... Passed 0.48 sec Start 86: lj 111/146 Test #86: lj ................................................***Failed 0.83 sec /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. =================================================================================== = BAD TERMINATION OF ONE OF YOUR APPLICATION PROCESSES = PID 4146373 RUNNING AT buildvm-17.phx2.fedoraproject.org = EXIT CODE: 134 = CLEANING UP REMAINING PROCESSES = YOU CAN IGNORE THE BELOW CLEANUP MESSAGES =================================================================================== YOUR APPLICATION TERMINATED WITH THE EXIT STRING: Aborted (signal 6) This typically refers to a problem with your application. Please see the FAQ page for debugging suggestions Start 87: pairs 112/146 Test #87: pairs .............................................***Failed 0.86 sec /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. =================================================================================== = BAD TERMINATION OF ONE OF YOUR APPLICATION PROCESSES = PID 4146403 RUNNING AT buildvm-17.phx2.fedoraproject.org = EXIT CODE: 134 = CLEANING UP REMAINING PROCESSES = YOU CAN IGNORE THE BELOW CLEANUP MESSAGES =================================================================================== YOUR APPLICATION TERMINATED WITH THE EXIT STRING: Aborted (signal 6) This typically refers to a problem with your application. Please see the FAQ page for debugging suggestions Start 88: polymer 113/146 Test #88: polymer ...........................................***Failed 0.89 sec /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. =================================================================================== = BAD TERMINATION OF ONE OF YOUR APPLICATION PROCESSES = PID 4146451 RUNNING AT buildvm-17.phx2.fedoraproject.org = EXIT CODE: 134 = CLEANING UP REMAINING PROCESSES = YOU CAN IGNORE THE BELOW CLEANUP MESSAGES =================================================================================== YOUR APPLICATION TERMINATED WITH THE EXIT STRING: Aborted (signal 6) This typically refers to a problem with your application. Please see the FAQ page for debugging suggestions Start 91: observable_cylindrical 114/146 Test #91: observable_cylindrical ............................***Failed 0.86 sec /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. =================================================================================== = BAD TERMINATION OF ONE OF YOUR APPLICATION PROCESSES = PID 4146498 RUNNING AT buildvm-17.phx2.fedoraproject.org = EXIT CODE: 134 = CLEANING UP REMAINING PROCESSES = YOU CAN IGNORE THE BELOW CLEANUP MESSAGES =================================================================================== YOUR APPLICATION TERMINATED WITH THE EXIT STRING: Aborted (signal 6) This typically refers to a problem with your application. Please see the FAQ page for debugging suggestions Start 92: observable_cylindricalLB 115/146 Test #92: observable_cylindricalLB .......................... Passed 0.31 sec Start 97: npt 116/146 Test #97: npt ...............................................***Failed 0.87 sec /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. =================================================================================== = BAD TERMINATION OF ONE OF YOUR APPLICATION PROCESSES = PID 4146569 RUNNING AT buildvm-17.phx2.fedoraproject.org = EXIT CODE: 134 = CLEANING UP REMAINING PROCESSES = YOU CAN IGNORE THE BELOW CLEANUP MESSAGES =================================================================================== YOUR APPLICATION TERMINATED WITH THE EXIT STRING: Aborted (signal 6) This typically refers to a problem with your application. Please see the FAQ page for debugging suggestions Start 100: accumulator 117/146 Test #100: accumulator .......................................***Failed 1.24 sec test_accumulator (__main__.AccumulatorTest) Check that accumulator results are the same as the respective numpy result. ... /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. =================================================================================== = BAD TERMINATION OF ONE OF YOUR APPLICATION PROCESSES = PID 4146602 RUNNING AT buildvm-17.phx2.fedoraproject.org = EXIT CODE: 134 = CLEANING UP REMAINING PROCESSES = YOU CAN IGNORE THE BELOW CLEANUP MESSAGES =================================================================================== YOUR APPLICATION TERMINATED WITH THE EXIT STRING: Aborted (signal 6) This typically refers to a problem with your application. Please see the FAQ page for debugging suggestions Start 102: array_properties 118/146 Test #102: array_properties ..................................***Failed 1.05 sec /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. =================================================================================== = BAD TERMINATION OF ONE OF YOUR APPLICATION PROCESSES = PID 4146648 RUNNING AT buildvm-17.phx2.fedoraproject.org = EXIT CODE: 134 = CLEANING UP REMAINING PROCESSES = YOU CAN IGNORE THE BELOW CLEANUP MESSAGES =================================================================================== YOUR APPLICATION TERMINATED WITH THE EXIT STRING: Aborted (signal 6) This typically refers to a problem with your application. Please see the FAQ page for debugging suggestions Start 104: observable_profile 119/146 Test #104: observable_profile ................................***Failed 0.91 sec /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. =================================================================================== = BAD TERMINATION OF ONE OF YOUR APPLICATION PROCESSES = PID 4146696 RUNNING AT buildvm-17.phx2.fedoraproject.org = EXIT CODE: 134 = CLEANING UP REMAINING PROCESSES = YOU CAN IGNORE THE BELOW CLEANUP MESSAGES =================================================================================== YOUR APPLICATION TERMINATED WITH THE EXIT STRING: Aborted (signal 6) This typically refers to a problem with your application. Please see the FAQ page for debugging suggestions Start 105: observable_profileLB 120/146 Test #105: observable_profileLB .............................. Passed 0.63 sec Start 106: rotate_system 121/146 Test #106: rotate_system .....................................***Failed 0.89 sec /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. =================================================================================== = BAD TERMINATION OF ONE OF YOUR APPLICATION PROCESSES = PID 4146764 RUNNING AT buildvm-17.phx2.fedoraproject.org = EXIT CODE: 134 = CLEANING UP REMAINING PROCESSES = YOU CAN IGNORE THE BELOW CLEANUP MESSAGES =================================================================================== YOUR APPLICATION TERMINATED WITH THE EXIT STRING: Aborted (signal 6) This typically refers to a problem with your application. Please see the FAQ page for debugging suggestions Start 107: random_pairs 122/146 Test #107: random_pairs ......................................***Failed 0.85 sec /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. =================================================================================== = BAD TERMINATION OF ONE OF YOUR APPLICATION PROCESSES = PID 4146797 RUNNING AT buildvm-17.phx2.fedoraproject.org = EXIT CODE: 134 = CLEANING UP REMAINING PROCESSES = YOU CAN IGNORE THE BELOW CLEANUP MESSAGES =================================================================================== YOUR APPLICATION TERMINATED WITH THE EXIT STRING: Aborted (signal 6) This typically refers to a problem with your application. Please see the FAQ page for debugging suggestions Start 108: lb_electrohydrodynamics 123/146 Test #108: lb_electrohydrodynamics ...........................***Failed 0.86 sec /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. =================================================================================== = BAD TERMINATION OF ONE OF YOUR APPLICATION PROCESSES = PID 4146845 RUNNING AT buildvm-17.phx2.fedoraproject.org = EXIT CODE: 134 = CLEANING UP REMAINING PROCESSES = YOU CAN IGNORE THE BELOW CLEANUP MESSAGES =================================================================================== YOUR APPLICATION TERMINATED WITH THE EXIT STRING: Aborted (signal 6) This typically refers to a problem with your application. Please see the FAQ page for debugging suggestions Start 109: cluster_analysis 124/146 Test #109: cluster_analysis ..................................***Failed 0.90 sec /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. =================================================================================== = BAD TERMINATION OF ONE OF YOUR APPLICATION PROCESSES = PID 4146891 RUNNING AT buildvm-17.phx2.fedoraproject.org = EXIT CODE: 134 = CLEANING UP REMAINING PROCESSES = YOU CAN IGNORE THE BELOW CLEANUP MESSAGES =================================================================================== YOUR APPLICATION TERMINATED WITH THE EXIT STRING: Aborted (signal 6) This typically refers to a problem with your application. Please see the FAQ page for debugging suggestions Start 110: pair_criteria 125/146 Test #110: pair_criteria .....................................***Failed 0.86 sec /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. =================================================================================== = BAD TERMINATION OF ONE OF YOUR APPLICATION PROCESSES = PID 4146937 RUNNING AT buildvm-17.phx2.fedoraproject.org = EXIT CODE: 134 = CLEANING UP REMAINING PROCESSES = YOU CAN IGNORE THE BELOW CLEANUP MESSAGES =================================================================================== YOUR APPLICATION TERMINATED WITH THE EXIT STRING: Aborted (signal 6) This typically refers to a problem with your application. Please see the FAQ page for debugging suggestions Start 113: thermalized_bond 126/146 Test #113: thermalized_bond ..................................***Failed 0.94 sec /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. =================================================================================== = BAD TERMINATION OF ONE OF YOUR APPLICATION PROCESSES = PID 4146982 RUNNING AT buildvm-17.phx2.fedoraproject.org = EXIT CODE: 134 = CLEANING UP REMAINING PROCESSES = YOU CAN IGNORE THE BELOW CLEANUP MESSAGES =================================================================================== YOUR APPLICATION TERMINATED WITH THE EXIT STRING: Aborted (signal 6) This typically refers to a problem with your application. Please see the FAQ page for debugging suggestions Start 114: thole 127/146 Test #114: thole .............................................***Failed 0.84 sec /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. =================================================================================== = BAD TERMINATION OF ONE OF YOUR APPLICATION PROCESSES = PID 4147029 RUNNING AT buildvm-17.phx2.fedoraproject.org = EXIT CODE: 134 = CLEANING UP REMAINING PROCESSES = YOU CAN IGNORE THE BELOW CLEANUP MESSAGES =================================================================================== YOUR APPLICATION TERMINATED WITH THE EXIT STRING: Aborted (signal 6) This typically refers to a problem with your application. Please see the FAQ page for debugging suggestions Start 115: lb_switch 128/146 Test #115: lb_switch ......................................... Passed 0.30 sec Start 117: lb_boundary_volume_force 129/146 Test #117: lb_boundary_volume_force ..........................***Failed 0.84 sec /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. =================================================================================== = BAD TERMINATION OF ONE OF YOUR APPLICATION PROCESSES = PID 4147097 RUNNING AT buildvm-17.phx2.fedoraproject.org = EXIT CODE: 134 = CLEANING UP REMAINING PROCESSES = YOU CAN IGNORE THE BELOW CLEANUP MESSAGES =================================================================================== YOUR APPLICATION TERMINATED WITH THE EXIT STRING: Aborted (signal 6) This typically refers to a problem with your application. Please see the FAQ page for debugging suggestions Start 118: lb_thermo_virtual 130/146 Test #118: lb_thermo_virtual .................................***Failed 0.82 sec /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. =================================================================================== = BAD TERMINATION OF ONE OF YOUR APPLICATION PROCESSES = PID 4147129 RUNNING AT buildvm-17.phx2.fedoraproject.org = EXIT CODE: 134 = CLEANING UP REMAINING PROCESSES = YOU CAN IGNORE THE BELOW CLEANUP MESSAGES =================================================================================== YOUR APPLICATION TERMINATED WITH THE EXIT STRING: Aborted (signal 6) This typically refers to a problem with your application. Please see the FAQ page for debugging suggestions Start 119: lb_poiseuille 131/146 Test #119: lb_poiseuille .....................................***Failed 0.81 sec /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. =================================================================================== = BAD TERMINATION OF ONE OF YOUR APPLICATION PROCESSES = PID 4147161 RUNNING AT buildvm-17.phx2.fedoraproject.org = EXIT CODE: 134 = CLEANING UP REMAINING PROCESSES = YOU CAN IGNORE THE BELOW CLEANUP MESSAGES =================================================================================== YOUR APPLICATION TERMINATED WITH THE EXIT STRING: Aborted (signal 6) This typically refers to a problem with your application. Please see the FAQ page for debugging suggestions Start 120: lb_poiseuille_cylinder 132/146 Test #120: lb_poiseuille_cylinder ............................***Failed 0.78 sec /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. =================================================================================== = BAD TERMINATION OF ONE OF YOUR APPLICATION PROCESSES = PID 4147196 RUNNING AT buildvm-17.phx2.fedoraproject.org = EXIT CODE: 134 = CLEANING UP REMAINING PROCESSES = YOU CAN IGNORE THE BELOW CLEANUP MESSAGES =================================================================================== YOUR APPLICATION TERMINATED WITH THE EXIT STRING: Aborted (signal 6) This typically refers to a problem with your application. Please see the FAQ page for debugging suggestions Start 121: lb_interpolation 133/146 Test #121: lb_interpolation ..................................***Failed 0.80 sec /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. =================================================================================== = BAD TERMINATION OF ONE OF YOUR APPLICATION PROCESSES = PID 4147228 RUNNING AT buildvm-17.phx2.fedoraproject.org = EXIT CODE: 134 = CLEANING UP REMAINING PROCESSES = YOU CAN IGNORE THE BELOW CLEANUP MESSAGES =================================================================================== YOUR APPLICATION TERMINATED WITH THE EXIT STRING: Aborted (signal 6) This typically refers to a problem with your application. Please see the FAQ page for debugging suggestions Start 126: lb_boundary 134/146 Test #126: lb_boundary .......................................***Failed 0.80 sec /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. =================================================================================== = BAD TERMINATION OF ONE OF YOUR APPLICATION PROCESSES = PID 4147263 RUNNING AT buildvm-17.phx2.fedoraproject.org = EXIT CODE: 134 = CLEANING UP REMAINING PROCESSES = YOU CAN IGNORE THE BELOW CLEANUP MESSAGES =================================================================================== YOUR APPLICATION TERMINATED WITH THE EXIT STRING: Aborted (signal 6) This typically refers to a problem with your application. Please see the FAQ page for debugging suggestions Start 127: lb_streaming 135/146 Test #127: lb_streaming ......................................***Failed 0.85 sec /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. =================================================================================== = BAD TERMINATION OF ONE OF YOUR APPLICATION PROCESSES = PID 4147294 RUNNING AT buildvm-17.phx2.fedoraproject.org = EXIT CODE: 134 = CLEANING UP REMAINING PROCESSES = YOU CAN IGNORE THE BELOW CLEANUP MESSAGES =================================================================================== YOUR APPLICATION TERMINATED WITH THE EXIT STRING: Aborted (signal 6) This typically refers to a problem with your application. Please see the FAQ page for debugging suggestions Start 128: lb_shear 136/146 Test #128: lb_shear ..........................................***Failed 0.85 sec /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. =================================================================================== = BAD TERMINATION OF ONE OF YOUR APPLICATION PROCESSES = PID 4147330 RUNNING AT buildvm-17.phx2.fedoraproject.org = EXIT CODE: 134 = CLEANING UP REMAINING PROCESSES = YOU CAN IGNORE THE BELOW CLEANUP MESSAGES =================================================================================== YOUR APPLICATION TERMINATED WITH THE EXIT STRING: Aborted (signal 6) This typically refers to a problem with your application. Please see the FAQ page for debugging suggestions Start 129: lb_thermostat 137/146 Test #129: lb_thermostat .....................................***Failed 0.74 sec /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. =================================================================================== = BAD TERMINATION OF ONE OF YOUR APPLICATION PROCESSES = PID 4147361 RUNNING AT buildvm-17.phx2.fedoraproject.org = EXIT CODE: 134 = CLEANING UP REMAINING PROCESSES = YOU CAN IGNORE THE BELOW CLEANUP MESSAGES =================================================================================== YOUR APPLICATION TERMINATED WITH THE EXIT STRING: Aborted (signal 6) This typically refers to a problem with your application. Please see the FAQ page for debugging suggestions Start 130: lb_buoyancy_force 138/146 Test #130: lb_buoyancy_force .................................***Failed 0.90 sec /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. =================================================================================== = BAD TERMINATION OF ONE OF YOUR APPLICATION PROCESSES = PID 4147382 RUNNING AT buildvm-17.phx2.fedoraproject.org = EXIT CODE: 134 = CLEANING UP REMAINING PROCESSES = YOU CAN IGNORE THE BELOW CLEANUP MESSAGES =================================================================================== YOUR APPLICATION TERMINATED WITH THE EXIT STRING: Aborted (signal 6) This typically refers to a problem with your application. Please see the FAQ page for debugging suggestions Start 131: lb_momentum_conservation 139/146 Test #131: lb_momentum_conservation ..........................***Failed 0.87 sec /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. =================================================================================== = BAD TERMINATION OF ONE OF YOUR APPLICATION PROCESSES = PID 4147421 RUNNING AT buildvm-17.phx2.fedoraproject.org = EXIT CODE: 134 = CLEANING UP REMAINING PROCESSES = YOU CAN IGNORE THE BELOW CLEANUP MESSAGES =================================================================================== YOUR APPLICATION TERMINATED WITH THE EXIT STRING: Aborted (signal 6) This typically refers to a problem with your application. Please see the FAQ page for debugging suggestions Start 135: observable_chain 140/146 Test #135: observable_chain ..................................***Failed 0.89 sec /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. =================================================================================== = BAD TERMINATION OF ONE OF YOUR APPLICATION PROCESSES = PID 4147467 RUNNING AT buildvm-17.phx2.fedoraproject.org = EXIT CODE: 134 = CLEANING UP REMAINING PROCESSES = YOU CAN IGNORE THE BELOW CLEANUP MESSAGES =================================================================================== YOUR APPLICATION TERMINATED WITH THE EXIT STRING: Aborted (signal 6) This typically refers to a problem with your application. Please see the FAQ page for debugging suggestions Start 136: mpiio 141/146 Test #136: mpiio .............................................***Failed 0.84 sec /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. =================================================================================== = BAD TERMINATION OF ONE OF YOUR APPLICATION PROCESSES = PID 4147512 RUNNING AT buildvm-17.phx2.fedoraproject.org = EXIT CODE: 134 = CLEANING UP REMAINING PROCESSES = YOU CAN IGNORE THE BELOW CLEANUP MESSAGES =================================================================================== YOUR APPLICATION TERMINATED WITH THE EXIT STRING: Aborted (signal 6) This typically refers to a problem with your application. Please see the FAQ page for debugging suggestions Start 137: gpu_availability 142/146 Test #137: gpu_availability .................................. Passed 0.24 sec Start 139: galilei 143/146 Test #139: galilei ...........................................***Failed 0.83 sec /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. =================================================================================== = BAD TERMINATION OF ONE OF YOUR APPLICATION PROCESSES = PID 4147581 RUNNING AT buildvm-17.phx2.fedoraproject.org = EXIT CODE: 134 = CLEANING UP REMAINING PROCESSES = YOU CAN IGNORE THE BELOW CLEANUP MESSAGES =================================================================================== YOUR APPLICATION TERMINATED WITH THE EXIT STRING: Aborted (signal 6) This typically refers to a problem with your application. Please see the FAQ page for debugging suggestions Start 141: linear_momentum 144/146 Test #141: linear_momentum ...................................***Failed 1.00 sec /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. =================================================================================== = BAD TERMINATION OF ONE OF YOUR APPLICATION PROCESSES = PID 4147614 RUNNING AT buildvm-17.phx2.fedoraproject.org = EXIT CODE: 134 = CLEANING UP REMAINING PROCESSES = YOU CAN IGNORE THE BELOW CLEANUP MESSAGES =================================================================================== YOUR APPLICATION TERMINATED WITH THE EXIT STRING: Aborted (signal 6) This typically refers to a problem with your application. Please see the FAQ page for debugging suggestions Start 142: linear_momentum_lb 145/146 Test #142: linear_momentum_lb ................................***Failed 0.85 sec /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. =================================================================================== = BAD TERMINATION OF ONE OF YOUR APPLICATION PROCESSES = PID 4147658 RUNNING AT buildvm-17.phx2.fedoraproject.org = EXIT CODE: 134 = CLEANING UP REMAINING PROCESSES = YOU CAN IGNORE THE BELOW CLEANUP MESSAGES =================================================================================== YOUR APPLICATION TERMINATED WITH THE EXIT STRING: Aborted (signal 6) This typically refers to a problem with your application. Please see the FAQ page for debugging suggestions Start 143: mmm1d 146/146 Test #143: mmm1d .............................................***Failed 0.76 sec /usr/include/c++/10/bits/stl_vector.h:1123: std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = char; _Alloc = boost::mpi::allocator; std::vector<_Tp, _Alloc>::reference = char&]: Assertion '__builtin_expect(!this->empty(), true)' failed. =================================================================================== = BAD TERMINATION OF ONE OF YOUR APPLICATION PROCESSES = PID 4147689 RUNNING AT buildvm-17.phx2.fedoraproject.org = EXIT CODE: 134 = CLEANING UP REMAINING PROCESSES = YOU CAN IGNORE THE BELOW CLEANUP MESSAGES =================================================================================== YOUR APPLICATION TERMINATED WITH THE EXIT STRING: Aborted (signal 6) This typically refers to a problem with your application. Please see the FAQ page for debugging suggestions 27% tests passed, 107 tests failed out of 146 Label Time Summary: gpu = 86.11 sec*proc (42 tests) long = 34.87 sec*proc (5 tests) parallel = 339.19 sec*proc (114 tests) parallel_odd = 287.65 sec*proc (83 tests) Total Test time (real) = 110.65 sec The following tests FAILED: 1 - save_checkpoint_lb.cpu-p3m.cpu-lj-therm.lb_1 (Failed) 2 - test_checkpoint_lb.cpu-p3m.cpu-lj-therm.lb_1 (Failed) 3 - save_checkpoint_lb.cpu-p3m.cpu-lj-therm.lb_0 (Failed) 4 - test_checkpoint_lb.cpu-p3m.cpu-lj-therm.lb_0 (Failed) 5 - save_checkpoint_lb.gpu-p3m.cpu-lj-therm.lb_1 (Failed) 6 - test_checkpoint_lb.gpu-p3m.cpu-lj-therm.lb_1 (Failed) 7 - save_checkpoint_lb.gpu-p3m.cpu-lj-therm.lb_0 (Failed) 8 - test_checkpoint_lb.gpu-p3m.cpu-lj-therm.lb_0 (Failed) 9 - save_checkpoint_ek.gpu_1 (Failed) 10 - test_checkpoint_ek.gpu_1 (Failed) 11 - save_checkpoint_ek.gpu_0 (Failed) 12 - test_checkpoint_ek.gpu_0 (Failed) 13 - save_checkpoint_lb.off-therm.npt-int.npt_1 (Failed) 14 - test_checkpoint_lb.off-therm.npt-int.npt_1 (Failed) 15 - save_checkpoint_lb.off-therm.langevin-int.nvt_1 (Failed) 16 - test_checkpoint_lb.off-therm.langevin-int.nvt_1 (Failed) 17 - save_checkpoint_lb.off-therm.dpd-int.sd_1 (Failed) 18 - test_checkpoint_lb.off-therm.dpd-int.sd_1 (Failed) 19 - cellsystem (Failed) 21 - constraint_homogeneous_magnetic_field (Failed) 22 - constraint_shape_based (Failed) 23 - coulomb_cloud_wall (Failed) 24 - coulomb_tuning (Failed) 25 - correlation (Failed) 28 - dds-and-bh-gpu (Failed) 29 - electrostaticInteractions (Failed) 30 - engine_langevin (Failed) 31 - engine_lb (Failed) 33 - icc (Failed) 35 - mass-and-rinertia_per_particle (Failed) 36 - integrate (Failed) 37 - interactions_bond_angle (Failed) 38 - interactions_bonded_interface (Failed) 39 - interactions_bonded (Failed) 40 - interactions_dihedral (Failed) 41 - interactions_non-bonded_interface (Failed) 42 - interactions_non-bonded (Failed) 43 - observables (Failed) 45 - particle (Failed) 46 - stress (Failed) 48 - tabulated (Failed) 49 - particle_slice (Failed) 50 - rigid_bond (Failed) 51 - rotation_per_particle (Failed) 52 - rotational_inertia (Failed) 55 - reaction_ensemble (Failed) 57 - constant_pH (Failed) 58 - writevtf (Failed) 59 - lb_stokes_sphere (Failed) 65 - exclusions (Failed) 67 - nsquare (Failed) 68 - virtual_sites_relative (Failed) 69 - virtual_sites_tracers (Failed) 70 - virtual_sites_tracers_gpu (Failed) 71 - domain_decomposition (Failed) 72 - layered (Failed) 73 - minimize_energy (Failed) 75 - lb (Failed) 76 - force_cap (Failed) 77 - dpd (Failed) 78 - hat (Failed) 79 - analyze_energy (Failed) 80 - analyze_mass_related (Failed) 82 - coulomb_mixed_periodicity (Failed) 83 - coulomb_cloud_wall_duplicated (Failed) 84 - collision_detection (Failed) 86 - lj (Failed) 87 - pairs (Failed) 88 - polymer (Failed) 90 - subt_lj (Failed) 91 - observable_cylindrical (Failed) 95 - comfixed (Failed) 96 - rescale (Failed) 97 - npt (Failed) 98 - elc_vs_mmm2d_neutral (Failed) 99 - elc_vs_mmm2d_nonneutral (Failed) 100 - accumulator (Failed) 102 - array_properties (Failed) 104 - observable_profile (Failed) 106 - rotate_system (Failed) 107 - random_pairs (Failed) 108 - lb_electrohydrodynamics (Failed) 109 - cluster_analysis (Failed) 110 - pair_criteria (Failed) 113 - thermalized_bond (Failed) 114 - thole (Failed) 117 - lb_boundary_volume_force (Failed) 118 - lb_thermo_virtual (Failed) 119 - lb_poiseuille (Failed) 120 - lb_poiseuille_cylinder (Failed) 121 - lb_interpolation (Failed) 126 - lb_boundary (Failed) 127 - lb_streaming (Failed) 128 - lb_shear (Failed) 129 - lb_thermostat (Failed) 130 - lb_buoyancy_force (Failed) 131 - lb_momentum_conservation (Failed) 132 - p3m_electrostatic_pressure (Failed) 135 - observable_chain (Failed) 136 - mpiio (Failed) 139 - galilei (Failed) 141 - linear_momentum (Failed) 142 - linear_momentum_lb (Failed) 143 - mmm1d (Failed) 144 - elc (Failed) 145 - elc_and_mmm2d_vs_analytic (Failed) 146 - h5md (Failed) Errors while running CTest make[3]: *** [testsuite/python/CMakeFiles/check_python.dir/build.make:80: testsuite/python/CMakeFiles/check_python] Error 8 make[2]: *** [CMakeFiles/Makefile2:1225: testsuite/python/CMakeFiles/check_python.dir/all] Error 2 make[1]: *** [CMakeFiles/Makefile2:1177: CMakeFiles/check.dir/rule] Error 2 make[3]: Leaving directory '/builddir/build/BUILD/espresso/mpich' make[2]: Leaving directory '/builddir/build/BUILD/espresso/mpich' make[1]: Leaving directory '/builddir/build/BUILD/espresso/mpich' make: Leaving directory '/builddir/build/BUILD/espresso/mpich' make: *** [Makefile:198: check] Error 2 error: Bad exit status from /var/tmp/rpm-tmp.jkl6kN (%check) Bad exit status from /var/tmp/rpm-tmp.jkl6kN (%check) RPM build errors: Child return code was: 1 EXCEPTION: [Error()] Traceback (most recent call last): File "/usr/lib/python3.7/site-packages/mockbuild/trace_decorator.py", line 93, in trace result = func(*args, **kw) File "/usr/lib/python3.7/site-packages/mockbuild/util.py", line 755, in do_with_status raise exception.Error("Command failed: \n # %s\n%s" % (command, output), child.returncode) mockbuild.exception.Error: Command failed: # bash --login -c /usr/bin/rpmbuild -bb --target x86_64 --nodeps /builddir/build/SPECS/espresso.spec