Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Using fasta file as input #2

Open
druvus opened this issue May 17, 2016 · 1 comment
Open

Using fasta file as input #2

druvus opened this issue May 17, 2016 · 1 comment

Comments

@druvus
Copy link
Collaborator

druvus commented May 17, 2016

Stand-alone basecallers (Deepnano and Nanocall) produces a single fasta-file with all basecalled sequences. If possible, it would be nice to be able to choose between fast5 and fasta as starting

@druvus
Copy link
Collaborator Author

druvus commented Feb 6, 2018

Currrent versions of albacore produces fastq or fast5 files. The code needs to be updated to handle fastq files with 1-n entries.

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

No branches or pull requests

1 participant