From 2382a57779af01e4f1359e5bd02d1ef40aa76042 Mon Sep 17 00:00:00 2001 From: Ege Ulgen Date: Mon, 14 Oct 2024 11:31:55 +0100 Subject: [PATCH] update docs --- DESCRIPTION | 2 +- NEWS.md | 5 +++++ README.Rmd | 2 +- README.md | 2 +- 4 files changed, 8 insertions(+), 3 deletions(-) diff --git a/DESCRIPTION b/DESCRIPTION index 311edfa4..2b4aea77 100644 --- a/DESCRIPTION +++ b/DESCRIPTION @@ -1,7 +1,7 @@ Package: pathfindR Type: Package Title: Enrichment Analysis Utilizing Active Subnetworks -Version: 2.4.1.9000 +Version: 2.4.1.9001 Authors@R: c(person("Ege", "Ulgen", role = c("cre", "cph"), email = "egeulgen@gmail.com", diff --git a/NEWS.md b/NEWS.md index 17c35fea..05e2613e 100644 --- a/NEWS.md +++ b/NEWS.md @@ -1,5 +1,10 @@ # pathfindR (development version) +## Minor Changes and Bug Fixes + +- fixed a bug in `visualize_KEGG_diagram()` where `ggkegg` was raising an error (#214) + + # pathfindR 2.4.1 ## Minor Changes and Bug Fixes diff --git a/README.Rmd b/README.Rmd index ff0a6fad..f761b22f 100644 --- a/README.Rmd +++ b/README.Rmd @@ -17,7 +17,7 @@ suppressPackageStartupMessages(library(pathfindR)) [![R-CMD-check](https://github.com/egeulgen/pathfindR/actions/workflows/R-CMD-check.yaml/badge.svg)](https://github.com/egeulgen/pathfindR/actions/workflows/R-CMD-check.yaml) [![Codecov test coverage](https://codecov.io/gh/egeulgen/pathfindR/branch/master/graph/badge.svg)](https://app.codecov.io/gh/egeulgen/pathfindR) -[![CRAN version](http://www.r-pkg.org/badges/version-ago/pathfindR)](https://cran.r-project.org/package=pathfindR) +[![CRAN version](https://www.r-pkg.org/badges/version/pathfindR)](https://cran.r-project.org/package=pathfindR) [![CRAN total downloads](https://cranlogs.r-pkg.org/badges/grand-total/pathfindR)](https://cran.r-project.org/package=pathfindR) [![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/r-pathfindr/README.html) [![License: MIT](https://img.shields.io/badge/License-MIT-yellow.svg)](https://opensource.org/license/mit) diff --git a/README.md b/README.md index 544d62c3..a1a62be6 100644 --- a/README.md +++ b/README.md @@ -9,7 +9,7 @@ [![Codecov test coverage](https://codecov.io/gh/egeulgen/pathfindR/branch/master/graph/badge.svg)](https://app.codecov.io/gh/egeulgen/pathfindR) [![CRAN -version](http://www.r-pkg.org/badges/version-ago/pathfindR)](https://cran.r-project.org/package=pathfindR) +version](https://www.r-pkg.org/badges/version/pathfindR)](https://cran.r-project.org/package=pathfindR) [![CRAN total downloads](https://cranlogs.r-pkg.org/badges/grand-total/pathfindR)](https://cran.r-project.org/package=pathfindR) [![install with