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Possibility to get specific cell type expression values in bulk RNAseq data after DWLS #19

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sunnysunnygood opened this issue May 21, 2024 · 0 comments
Open

Possibility to get specific cell type expression values in bulk RNAseq data after DWLS #19

sunnysunnygood opened this issue May 21, 2024 · 0 comments

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@sunnysunnygood
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sunnysunnygood commented May 21, 2024 •
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Dear guys,

Is it possible to get the cell type expression values in bulkRNAseq after DWLS?

Say, there are 10 cell types in the bulkRNAseq data (deconvolution by scRNAseq, which has 10 cell types); is it possible to only extract the cell type 5 expression in the bulkRNAseq data?
@sunnysunnygood sunnysunnygood changed the title Error in aggregate.data.frame: no rows to aggregate at the buildSignatureMatrixMAST step Possibility to get cell type expression values in bulk RNAseq data after DWLS May 27, 2024
@sunnysunnygood sunnysunnygood changed the title Possibility to get cell type expression values in bulk RNAseq data after DWLS Possibility to get specific cell type expression values in bulk RNAseq data after DWLS May 27, 2024
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