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Normalization methods #18

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sanderslhc opened this issue May 20, 2024 · 0 comments
Open

Normalization methods #18

sanderslhc opened this issue May 20, 2024 · 0 comments

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@sanderslhc
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Hi,

Thank you for this amazing software. I'm using DWLS to run deconvolution. In your codes, DWLS will perform DE analysis to identify markers for each cell type. Does it mean the input file should be UMI counts, not any nomalized data? Can I use TPM or CPM as the input file?
Thank you.

Best regards
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