Merge branch 'feature_1852_useCase_physics_tendency' of https://githu…

…b.com/dtcenter/METplus into feature_1852_useCase_physics_tendency
dtcenter · Oct 25, 2022 · 3f804fb · 3f804fb
2 parents e698e31 + 4a9209d
commit 3f804fb
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diff --git a/...es/model_applications/short_range/UserScript_fcstFV3_fcstOnly_PhysicsTendency_Planview.py b/...es/model_applications/short_range/UserScript_fcstFV3_fcstOnly_PhysicsTendency_Planview.py
@@ -15,7 +15,7 @@
 # To plot tendencies of temperature, moisture, and wind components averaged over 
 # a time window and spatial domain.  Tendencies are partitioned into physics 
 # parameterizations and dynamics.  Physics parameterizations include schemes like 
-# deep convection, convective gravity wave drag, short wave radiatioin, plantetary
+# deep convection, convective gravity wave drag, short wave radiation, plantetary
 # boundary layer, microphysics, and others.  Non-physics tendencies (or dynamics)
 # are due to horizontal and vertical motion.  The residual (which should be zero)
 # is the difference between the actual change in the state variable over the
@@ -45,6 +45,24 @@
 #  the value of INPUT_BASE. See the "Running METplus" section below for more
 #  information.
 
+
+##############################################################################
+# External Dependencies 
+# ---------------------
+# You will need to use a versio of Python 3.86 that has the following packages
+# installed:
+#
+#  * cartopy (0.20.3 only)
+#  * matplotlib
+#  * metpy
+#  * numpy
+#  * pandas
+#  * shapely
+#  * xarray
+#
+
+
+
 ##############################################################################
 # METplus Components
 # ------------------

diff --git a/...lications/short_range/UserScript_fcstFV3_fcstOnly_PhysicsTendency_VerticalCrossSection.py b/...lications/short_range/UserScript_fcstFV3_fcstOnly_PhysicsTendency_VerticalCrossSection.py
@@ -13,7 +13,7 @@
 # To plot tendencies of temperature, moisture, and wind components averaged over 
 # a time window and spatial domain.  Tendencies are partitioned into physics 
 # parameterizations and dynamics.  Physics parameterizations include schemes like 
-# deep convection, convective gravity wave drag, short wave radiatioin, plantetary
+# deep convection, convective gravity wave drag, short wave radiation, plantetary
 # boundary layer, microphysics, and others.  Non-physics tendencies (or dynamics)
 # are due to horizontal and vertical motion.  The residual (which should be zero)
 # is the difference between the actual change in the state variable over the requested
@@ -40,6 +40,24 @@
 #
 
 
+
+##############################################################################
+# External Dependencies 
+# ---------------------
+# You will need to use a versio of Python 3.86 that has the following packages
+# installed:
+#
+#  * cartopy (0.20.3 only)
+#  * matplotlib
+#  * metpy
+#  * numpy
+#  * pandas
+#  * shapely
+#  * xarray
+#
+
+
+
 ##############################################################################
 # METplus Components
 # ------------------

diff --git a/...l_applications/short_range/UserScript_fcstFV3_fcstOnly_PhysicsTendency_VerticalProfile.py b/...l_applications/short_range/UserScript_fcstFV3_fcstOnly_PhysicsTendency_VerticalProfile.py
@@ -13,7 +13,7 @@
 # To plot tendencies of temperature, moisture, and wind components averaged over 
 # a time window and spatial domain.  Tendencies are partitioned into physics 
 # parameterizations and dynamics.  Physics parameterizations include schemes like 
-# deep convection, convective gravity wave drag, short wave radiatioin, plantetary
+# deep convection, convective gravity wave drag, short wave radiation, plantetary
 # boundary layer, microphysics, and others.  Non-physics tendencies (or dynamics)
 # are due to horizontal and vertical motion.  The residual (which should be zero)
 # is the difference between the actual change in the state variable over the requested
@@ -48,6 +48,25 @@
 # | The tarball should be unpacked into the directory that you will set the value of INPUT_BASE. See `Running METplus`_ section for more information.
 #
 
+
+
+##############################################################################
+# External Dependencies 
+# ---------------------
+# You will need to use a versio of Python 3.86 that has the following packages
+# installed:
+#
+#  * cartopy (0.20.3 only)
+#  * matplotlib
+#  * metpy
+#  * numpy
+#  * pandas
+#  * shapely
+#  * xarray
+#
+
+
+
 ##############################################################################
 # METplus Components
 # ------------------

diff --git a/.../model_applications/short_range/UserScript_fcstFV3_fcstOnly_PhysicsTendency_Planview.conf b/.../model_applications/short_range/UserScript_fcstFV3_fcstOnly_PhysicsTendency_Planview.conf
@@ -37,7 +37,10 @@ USER_SCRIPT_RUNTIME_FREQ = RUN_ONCE
 # https://metplus.readthedocs.io/en/latest/Users_Guide/wrappers.html#userscript
 ###
 
-USER_SCRIPT_COMMAND = {PARM_BASE}/use_cases/model_applications/short_range/UserScript_fcstFV3_fcstOnly_PhysicsTendency_Planview/planview_plot.py {PARM_BASE}/use_cases/model_applications/short_range/UserScript_fcstFV3_fcstOnly_PhysicsTendency_Planview/physics_tendency_planview.yaml {INPUT_BASE}/model_applications/short_range/UserScript_fcstFV3_fcstOnly_PhysicsTendency/fv3_history.nc {INPUT_BASE}/model_applications/short_range/UserScript_fcstFV3_fcstOnly_PhysicsTendency/grid_spec.nc tmp pbl -p 500 -t 1 -v 20190504T14 -o {OUTPUT_BASE}/plots/short_range-physics_tendency_planview.png --nofineprint
+FV3_HISTORY_FILE = {INPUT_BASE}/model_applications/short_range/UserScript_fcstFV3_fcstOnly_PhysicsTendency/fv3_history.nc
+GRID_SPEC_FILE = {INPUT_BASE}/model_applications/short_range/UserScript_fcstFV3_fcstOnly_PhysicsTendency/grid_spec.nc
+PRESSURE_LEVEL = 500
+USER_SCRIPT_COMMAND = {PARM_BASE}/use_cases/model_applications/short_range/UserScript_fcstFV3_fcstOnly_PhysicsTendency_Planview/planview_plot.py {PARM_BASE}/use_cases/model_applications/short_range/UserScript_fcstFV3_fcstOnly_PhysicsTendency_Planview/physics_tendency_planview.yaml {FV3_HISTORY_FILE} {GRID_SPEC_FILE} tmp pbl -p {PRESSURE_LEVEL} -t 1 -v 20190504T14 -o {OUTPUT_BASE}/plots/short_range-physics_tendency_planview.png --nofineprint
 
 [user_env_vars]
 
@@ -48,6 +51,3 @@ LOG_FILE = "planview.log"
 LOG_LEVEL = "DEBUG"
 
 YAML_CONFIG_NAME = {PARM_BASE}/use_cases/model_applications/short_range/UserScript_fcstFV3_fcstOnly_PhysicsTendency_Planview/physics_tendency_planview.yaml
-
-METPLOTPY_BASE = {METPLUS_BASE}/../METplotpy
-PYTHONPATH = {METPLOTPY_BASE}:{METPLOTPY_BASE}/metplotpy:{METPLOTPY_BASE}/metplotpy/contributed:{METPLOTPY_BASE}/metplotpy/contributed/fv3_physics_tend
diff --git a/...cations/short_range/UserScript_fcstFV3_fcstOnly_PhysicsTendency_VerticalCrossSection.conf b/...cations/short_range/UserScript_fcstFV3_fcstOnly_PhysicsTendency_VerticalCrossSection.conf
@@ -37,7 +37,9 @@ USER_SCRIPT_RUNTIME_FREQ = RUN_ONCE
 # https://metplus.readthedocs.io/en/latest/Users_Guide/wrappers.html#userscript
 ###
 
-USER_SCRIPT_COMMAND = {PARM_BASE}/use_cases/model_applications/short_range/UserScript_fcstFV3_fcstOnly_PhysicsTendency_VerticalCrossSection/vertical_cross_section_plot.py {PARM_BASE}/use_cases/model_applications/short_range/UserScript_fcstFV3_fcstOnly_PhysicsTendency_VerticalCrossSection/physics_tendency_vertical_cross_section.yaml {INPUT_BASE}/model_applications/short_range/UserScript_fcstFV3_fcstOnly_PhysicsTendency/fv3_history.nc {INPUT_BASE}/model_applications/short_range/UserScript_fcstFV3_fcstOnly_PhysicsTendency/grid_spec.nc tmp -t 2 -v 20190504T14 -s 32 -115 -e 34 -82 -o {OUTPUT_BASE}/plots/short_range-physics_tendency_vertical_cross_section.png --nofineprint
+FV3_HISTORY_FILE = {INPUT_BASE}/model_applications/short_range/UserScript_fcstFV3_fcstOnly_PhysicsTendency/fv3_history.nc
+GRID_SPEC_FILE = {INPUT_BASE}/model_applications/short_range/UserScript_fcstFV3_fcstOnly_PhysicsTendency/grid_spec.nc
+USER_SCRIPT_COMMAND = {PARM_BASE}/use_cases/model_applications/short_range/UserScript_fcstFV3_fcstOnly_PhysicsTendency_VerticalCrossSection/vertical_cross_section_plot.py {PARM_BASE}/use_cases/model_applications/short_range/UserScript_fcstFV3_fcstOnly_PhysicsTendency_VerticalCrossSection/physics_tendency_vertical_cross_section.yaml {FV3_HISTORY_FILE} {GRID_SPEC_FILE} tmp -t 2 -v 20190504T14 -s 32 -115 -e 34 -82 -o {OUTPUT_BASE}/plots/short_range-physics_tendency_vertical_cross_section.png --nofineprint
 
 [user_env_vars]
 
@@ -48,7 +50,3 @@ LOG_FILE = "VerticalCrossSection.log"
 LOG_LEVEL = "DEBUG"
 
 YAML_CONFIG_NAME = {PARM_BASE}/use_cases/model_applications/short_range/UserScript_fcstFV3_fcstOnly_PhysicsTendency_VerticalCrossSection/physics_tendency_vertical_cross_section.yaml
-
-METPLOTPY_BASE = {METPLUS_BASE}/../METplotpy
-PYTHONPATH = {METPLOTPY_BASE}:{METPLOTPY_BASE}/metplotpy:{METPLOTPY_BASE}/metplotpy/contributed:{METPLOTPY_BASE}/metplotpy/contributed/fv3_physics_tend
-
diff --git a/...applications/short_range/UserScript_fcstFV3_fcstOnly_PhysicsTendency_VerticalProfile.conf b/...applications/short_range/UserScript_fcstFV3_fcstOnly_PhysicsTendency_VerticalProfile.conf
@@ -37,7 +37,12 @@ USER_SCRIPT_RUNTIME_FREQ = RUN_ONCE
 # https://metplus.readthedocs.io/en/latest/Users_Guide/wrappers.html#userscript
 ###
 
-USER_SCRIPT_COMMAND = {PARM_BASE}/use_cases/model_applications/short_range/UserScript_fcstFV3_fcstOnly_PhysicsTendency_VerticalProfile/vertical_profile_plot.py {PARM_BASE}/use_cases/model_applications/short_range/UserScript_fcstFV3_fcstOnly_PhysicsTendency_VerticalProfile/physics_tendency_vertical_profile.yaml {INPUT_BASE}/model_applications/short_range/UserScript_fcstFV3_fcstOnly_PhysicsTendency/fv3_history.nc {INPUT_BASE}/model_applications/short_range/UserScript_fcstFV3_fcstOnly_PhysicsTendency/grid_spec.nc tmp -t 2 -v 20190504T14 -o {OUTPUT_BASE}/plots/short_range-physics_tendency_vertical_profile.png -s {INPUT_BASE}/model_applications/short_range/UserScript_fcstFV3_fcstOnly_PhysicsTendency/shapefiles/MID_CONUS --nofineprint
+FV3_HISTORY_FILE = {INPUT_BASE}/model_applications/short_range/UserScript_fcstFV3_fcstOnly_PhysicsTendency/fv3_history.nc
+GRID_SPEC_FILE = {INPUT_BASE}/model_applications/short_range/UserScript_fcstFV3_fcstOnly_PhysicsTendency/grid_spec.nc
+USER_SCRIPT_COMMAND = {PARM_BASE}/use_cases/model_applications/short_range/UserScript_fcstFV3_fcstOnly_PhysicsTendency_Planview
+
+
+USER_SCRIPT_COMMAND = {PARM_BASE}/use_cases/model_applications/short_range/UserScript_fcstFV3_fcstOnly_PhysicsTendency_VerticalProfile/vertical_profile_plot.py {PARM_BASE}/use_cases/model_applications/short_range/UserScript_fcstFV3_fcstOnly_PhysicsTendency_VerticalProfile/physics_tendency_vertical_profile.yaml {FV3_HISTORY_FILE} {GRID_SPEC_FILE} tmp -t 2 -v 20190504T14 -o {OUTPUT_BASE}/plots/short_range-physics_tendency_vertical_profile.png -s {INPUT_BASE}/model_applications/short_range/UserScript_fcstFV3_fcstOnly_PhysicsTendency/shapefiles/MID_CONUS --nofineprint
 
 
 [user_env_vars]
@@ -49,7 +54,3 @@ LOG_FILE = "VerticalProfile.log"
 LOG_LEVEL = "DEBUG"
 
 YAML_CONFIG_NAME = {PARM_BASE}/use_cases/model_applications/short_range/UserScript_fcstFV3_fcstOnly_PhysicsTendency_VerticalProfile/physics_tendency_vertical_profile.yaml
-
-METPLOTPY_BASE = {METPLUS_BASE}/../METplotpy
-PYTHONPATH = {METPLOTPY_BASE}:{METPLOTPY_BASE}/metplotpy:{METPLOTPY_BASE}/metplotpy/contributed:{METPLOTPY_BASE}/metplotpy/contributed/fv3_physics_tend
-