From 23bda51df6c00f8e141b82c1df7312132d4b8ca7 Mon Sep 17 00:00:00 2001
From: George McCabe <23407799+georgemccabe@users.noreply.github.com>
Date: Tue, 26 Jul 2022 11:45:14 -0600
Subject: [PATCH] bugfix #1706 fix PhaseDiagram use case to avoid writing into
 INPUT_BASE (#1708)

---
 .../s2s_mjo/UserScript_obsERA_obsOnly_PhaseDiagram.conf      | 4 ++--
 .../save_input_files_txt.py                                  | 5 +++++
 2 files changed, 7 insertions(+), 2 deletions(-)

diff --git a/parm/use_cases/model_applications/s2s_mjo/UserScript_obsERA_obsOnly_PhaseDiagram.conf b/parm/use_cases/model_applications/s2s_mjo/UserScript_obsERA_obsOnly_PhaseDiagram.conf
index bb8168e9b4..e4617cf895 100644
--- a/parm/use_cases/model_applications/s2s_mjo/UserScript_obsERA_obsOnly_PhaseDiagram.conf
+++ b/parm/use_cases/model_applications/s2s_mjo/UserScript_obsERA_obsOnly_PhaseDiagram.conf
@@ -50,7 +50,7 @@ FCST_RUN = False
 # Input and Output Directories for the OBS OLR Files and output text file containing the file list
 OBS_PDTIME_FMT = %Y%m%d-%H%M%S
 OBS_PDTIME_INPUT_TEMPLATE = {valid?fmt=%Y%m%d-%H%M%S}
-OBS_PDTIME_OUTPUT_DIR = {INPUT_BASE}/model_applications/s2s_mjo/UserScript_obsERA_obsOnly_PhaseDiagram/
+OBS_PDTIME_OUTPUT_DIR = {OUTPUT_BASE}/model_applications/s2s_mjo/UserScript_obsERA_obsOnly_PhaseDiagram/
 OBS_PDTIME_OUTPUT_TEMPLATE = time_list_lead{lead?fmt=%HHH}.txt
 
 
@@ -75,7 +75,7 @@ SCRIPT_OUTPUT_BASE = {OUTPUT_BASE}
 PLOT_INDEX = RMM
 
 # Input Directories
-OBS_PHASE_DIAGRAM_INPUT_DIR = {OBS_PDTIME_OUTPUT_DIR}
+OBS_PHASE_DIAGRAM_INPUT_DIR = {INPUT_BASE}/model_applications/s2s_mjo/UserScript_obsERA_obsOnly_PhaseDiagram
 
 # Input filename template
 OBS_PHASE_DIAGRAM_INPUT_FILE = rmm.1x.txt
diff --git a/parm/use_cases/model_applications/s2s_mjo/UserScript_obsERA_obsOnly_PhaseDiagram/save_input_files_txt.py b/parm/use_cases/model_applications/s2s_mjo/UserScript_obsERA_obsOnly_PhaseDiagram/save_input_files_txt.py
index 69a7e65d09..b8954f9569 100755
--- a/parm/use_cases/model_applications/s2s_mjo/UserScript_obsERA_obsOnly_PhaseDiagram/save_input_files_txt.py
+++ b/parm/use_cases/model_applications/s2s_mjo/UserScript_obsERA_obsOnly_PhaseDiagram/save_input_files_txt.py
@@ -6,6 +6,11 @@
 input_file = sys.argv[1]
 output_file = sys.argv[2]
 
+output_dir = os.path.dirname(output_file)
+if not os.path.exists(output_dir):
+    print(f'Creating output dir: {output_dir}')
+    os.makedirs(output_dir)
+
 filelist = open(output_file,'a+')
 filelist.write(input_file + '\n')
 filelist.close()