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orthologr.yml
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orthologr.yml
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name: orthologr
channels:
- biobuilds
- conda-forge
- bioconda
- defaults
dependencies:
- _r-mutex=1.0.1=anacondar_1
- argtable2=2.13=h1de35cc_1001
- bioconductor-biobase=2.42.0=r351h1de35cc_1
- bioconductor-biocgenerics=0.28.0=r351_1
- bioconductor-biocparallel=1.16.6=r351h71abe9c_0
- bioconductor-biostrings=2.50.2=r351h1de35cc_0
- bioconductor-delayedarray=0.8.0=r351h1de35cc_0
- bioconductor-genomeinfodb=1.18.1=r351_0
- bioconductor-genomeinfodbdata=1.2.1=r351_0
- bioconductor-genomicalignments=1.18.1=r351h1de35cc_0
- bioconductor-genomicranges=1.34.0=r351h1de35cc_0
- bioconductor-iranges=2.16.0=r351h1de35cc_0
- bioconductor-rsamtools=1.34.0=r351h0a44026_0
- bioconductor-rtracklayer=1.42.1=r351hc2b1221_1
- bioconductor-s4vectors=0.20.1=r351h470a237_0
- bioconductor-summarizedexperiment=1.12.0=r351_0
- bioconductor-xvector=0.22.0=r351h1de35cc_0
- bioconductor-zlibbioc=1.28.0=r351h1de35cc_0
- blast=2.6.0=boost1.64_2
- boost=1.68.0=py27h9888f84_1001
- boost-cpp=1.68.0=h6f8c590_1000
- bwidget=1.9.11=1
- bzip2=1.0.6=h1de35cc_1002
- ca-certificates=2019.6.16=hecc5488_0
- cairo=1.16.0=h0ab9d94_1001
- cctools=895=h7512d6f_0
- certifi=2019.6.16=py27_0
- clang=4.0.1=h662ec87_0
- clang_osx-64=4.0.1=h1ce6c1d_16
- clangxx=4.0.1=hc9b4283_0
- clangxx_osx-64=4.0.1=h22b1bf0_16
- cloog=0.18.0=10
- clustalo=1.2.4=hfc679d8_2
- clustalw=2.1=1
- compiler-rt=4.0.1=h5487866_0
- curl=7.64.1=h22ea746_0
- diamond=0.9.24=hbde9309_1
- dlcpar=1.0=py27h24bf2e0_1
- fastme=2.1.5=0
- fasttree=2.1.10=h1de35cc_3
- fontconfig=2.13.1=h1027ab8_1000
- freetype=2.10.0=h24853df_0
- gawk=4.2.1=h1de35cc_1000
- gcc=4.8.5=8
- gettext=0.19.8.1=h46ab8bc_1002
- gfortran_osx-64=4.8.5=h22b1bf0_8
- glib=2.58.3=h9d45998_1001
- gmp=5.1.2=6
- graphite2=1.3.13=h2098e52_1000
- gsl=2.5=ha2d443c_0
- harfbuzz=2.4.0=h92b87b8_1
- icu=58.2=h0a44026_1000
- iqtree=1.6.11=h5c9b4e4_0
- isl=0.12.2=1
- jpeg=9c=h1de35cc_1001
- krb5=1.16.3=hcfa6398_1001
- ld64=274.2=h7c2db76_0
- libblas=3.8.0=10_openblas
- libcblas=3.8.0=10_openblas
- libcurl=7.64.1=h16faf7d_0
- libcxx=4.0.1=h579ed51_0
- libcxxabi=4.0.1=hebd6815_0
- libedit=3.1.20170329=hcfe32e1_1001
- libffi=3.2.1=h6de7cb9_1006
- libgcc=4.8.5=hdbeacc1_10
- libgfortran=3.0.1=0
- libiconv=1.15=h01d97ff_1005
- liblapack=3.8.0=10_openblas
- libopenblas=0.3.6=hd44dcd8_4
- libpng=1.6.37=h2573ce8_0
- libssh2=1.8.2=hcdc9a53_2
- libtiff=4.0.10=h79f4b77_1001
- libxml2=2.9.9=hd80cff7_1
- llvm=4.0.1=hc748206_0
- llvm-lto-tapi=4.0.1=h6701bc3_0
- llvm-openmp=8.0.0=h770b8ee_0
- lz4-c=1.8.3=h6de7cb9_1001
- mafft=7.407=h0a44026_2
- make=4.2.1=h1de35cc_2004
- mcl=14.137=pl526h470a237_4
- mmseqs2=9.d36de=hacce2fa_0
- mpc=1.1.0=4
- mpfr=3.1.5=0
- muscle=3.8.1551=h04f5b5a_4
- ncurses=6.1=h0a44026_1002
- numpy=1.16.4=py27h6b0580a_0
- openblas=0.3.6=hd44dcd8_4
- openmp=8.0.0=0
- openssl=1.1.1c=h01d97ff_0
- orthofinder=2.3.3=0
- pango=1.40.14=h0da9b22_1005
- pcre=8.41=h0a44026_1003
- perl=5.26.2=haec8ef5_1006
- pip=19.1.1=py27_0
- pixman=0.38.0=h01d97ff_1003
- python=2.7.15=hd51d24c_1009
- r=3.5.1=r351_1000
- r-base=3.5.1=h49b657e_1008
- r-bh=1.69.0_1=r351h6115d3f_0
- r-bitops=1.0_6=r351h46e59ec_1002
- r-boot=1.3_23=r351h6115d3f_0
- r-class=7.3_15=r351h46e59ec_1000
- r-cluster=2.1.0=r35haf69682_0
- r-codetools=0.2_16=r351h6115d3f_1000
- r-foreign=0.8_71=r351h46e59ec_1002
- r-formatr=1.7=r35h6115d3f_0
- r-futile.logger=1.4.3=r351h6115d3f_1001
- r-futile.options=1.0.1=r351h6115d3f_1000
- r-kernsmooth=2.23_15=r351hfffe0aa_1002
- r-lambda.r=1.2.3=r351h6115d3f_1000
- r-lattice=0.20_38=r351h46e59ec_1000
- r-mass=7.3_51.4=r351h159158b_0
- r-matrix=1.2_17=r351h159158b_0
- r-matrixstats=0.54.0=r351h46e59ec_1000
- r-mgcv=1.8_28=r351h159158b_0
- r-nlme=3.1_140=r351haf69682_0
- r-nnet=7.3_12=r351h46e59ec_1002
- r-rcurl=1.95_4.12=r351h159158b_0
- r-recommended=3.5.1=r351_1001
- r-rpart=4.1_15=r351h159158b_0
- r-snow=0.4_3=r351h6115d3f_1000
- r-spatial=7.3_11=r351h46e59ec_1002
- r-survival=2.44_1.1=r351h159158b_0
- r-xml=3.98_1.20=r35h159158b_0
- raxml=8.2.12=h1de35cc_1
- readline=8.0=hcfe32e1_0
- scipy=1.2.1=py27hbd7caa9_1
- setuptools=41.0.1=py27_0
- sqlite=3.29.0=hb7d70f7_0
- t-coffee=11.00.00_8cbe486=1
- tk=8.6.9=h2573ce8_1002
- tktable=2.10=h1de35cc_0
- wheel=0.33.4=py27_0
- xz=5.2.4=h1de35cc_1001
- zlib=1.2.11=h1de35cc_1004
prefix: /miniconda3/envs/orthologr