r4.3.2_seurat5.0.1_for_analysis_20250116.yml

name: seurat5
channels:
  - local
  - bioconda
  - conda-forge
  - defaults
  - r
dependencies:
  - _libgcc_mutex=0.1=conda_forge
  - _openmp_mutex=4.5=2_gnu
  - _r-mutex=1.0.1=anacondar_1
  - aiohttp=3.9.3=py312h98912ed_0
  - aiosignal=1.3.1=pyhd8ed1ab_0
  - anndata=0.10.5.post1=pyhd8ed1ab_0
  - annotated-types=0.6.0=pyhd8ed1ab_0
  - anyio=4.3.0=pyhd8ed1ab_0
  - aom=3.8.1=h59595ed_0
  - argcomplete=3.2.2=pyhd8ed1ab_0
  - argon2-cffi=23.1.0=pyhd8ed1ab_0
  - argon2-cffi-bindings=21.2.0=py312h98912ed_4
  - arpack=3.8.0=nompi_h0baa96a_101
  - array-api-compat=1.4.1=pyhd8ed1ab_0
  - arrow=1.3.0=pyhd8ed1ab_0
  - asciitree=0.3.3=py_2
  - asttokens=2.4.1=pyhd8ed1ab_0
  - async-lru=2.0.4=pyhd8ed1ab_0
  - attrs=23.2.0=pyh71513ae_0
  - aws-c-auth=0.7.15=h70caa3e_0
  - aws-c-cal=0.6.9=h14ec70c_3
  - aws-c-common=0.9.12=hd590300_0
  - aws-c-compression=0.2.17=h572eabf_8
  - aws-c-event-stream=0.4.1=h17cd1f3_5
  - aws-c-http=0.8.0=hc6da83f_5
  - aws-c-io=0.14.3=h3c8c088_1
  - aws-c-mqtt=0.10.1=h0ef3971_3
  - aws-c-s3=0.5.0=h1b46bed_2
  - aws-c-sdkutils=0.1.14=h572eabf_0
  - aws-checksums=0.1.17=h572eabf_7
  - aws-crt-cpp=0.26.1=h33f84b2_9
  - aws-sdk-cpp=1.11.242=h65f022c_0
  - azure-core-cpp=1.10.3=h91d86a7_0
  - azure-storage-blobs-cpp=12.10.0=h00ab1b0_0
  - azure-storage-common-cpp=12.5.0=hb858b4b_2
  - babel=2.14.0=pyhd8ed1ab_0
  - beautifulsoup4=4.12.3=pyha770c72_0
  - binutils_impl_linux-64=2.40=hf600244_0
  - bioconductor-beachmat=2.18.0=r43hf17093f_0
  - bioconductor-biobase=2.62.0=r43ha9d7317_1
  - bioconductor-biocgenerics=0.48.1=r43hdfd78af_2
  - bioconductor-complexheatmap=2.18.0=r43hdfd78af_0
  - bioconductor-data-packages=20231203=hdfd78af_0
  - bioconductor-delayedarray=0.28.0=r43ha9d7317_1
  - bioconductor-delayedmatrixstats=1.24.0=r43hdfd78af_0
  - bioconductor-genomeinfodb=1.38.1=r43hdfd78af_1
  - bioconductor-genomeinfodbdata=1.2.11=r43hdfd78af_1
  - bioconductor-genomicranges=1.54.1=r43ha9d7317_1
  - bioconductor-glmgampoi=1.14.0=r43hf17093f_0
  - bioconductor-hdf5array=1.30.0=r43ha9d7317_0
  - bioconductor-iranges=2.36.0=r43ha9d7317_1
  - bioconductor-matrixgenerics=1.14.0=r43hdfd78af_1
  - bioconductor-rhdf5=2.46.1=r43hf17093f_0
  - bioconductor-rhdf5filters=1.14.1=r43hf17093f_0
  - bioconductor-rhdf5lib=1.24.0=r43ha9d7317_1
  - bioconductor-s4arrays=1.2.0=r43ha9d7317_1
  - bioconductor-s4vectors=0.40.2=r43ha9d7317_1
  - bioconductor-singlecellexperiment=1.24.0=r43hdfd78af_0
  - bioconductor-sparsearray=1.2.2=r43ha9d7317_1
  - bioconductor-sparsematrixstats=1.14.0=r43hf17093f_0
  - bioconductor-summarizedexperiment=1.32.0=r43hdfd78af_0
  - bioconductor-xvector=0.42.0=r43ha9d7317_1
  - bioconductor-zlibbioc=1.48.0=r43ha9d7317_1
  - bleach=6.1.0=pyhd8ed1ab_0
  - blosc=1.21.5=h0f2a231_0
  - bokeh=3.3.4=pyhd8ed1ab_0
  - brotli=1.1.0=hd590300_1
  - brotli-bin=1.1.0=hd590300_1
  - brotli-python=1.1.0=py312h30efb56_1
  - brunsli=0.1=h9c3ff4c_0
  - bwidget=1.9.14=ha770c72_1
  - bzip2=1.0.8=hd590300_5
  - c-ares=1.26.0=hd590300_0
  - c-blosc2=2.12.0=hb4ffafa_0
  - ca-certificates=2024.12.14=hbcca054_0
  - cached-property=1.5.2=hd8ed1ab_1
  - cached_property=1.5.2=pyha770c72_1
  - cairo=1.18.0=h3faef2a_0
  - certifi=2024.12.14=pyhd8ed1ab_0
  - cffi=1.16.0=py312hf06ca03_0
  - cfitsio=4.3.1=hbdc6101_0
  - charls=2.4.2=h59595ed_0
  - charset-normalizer=3.3.2=pyhd8ed1ab_0
  - click=8.1.7=unix_pyh707e725_0
  - cloudpickle=3.0.0=pyhd8ed1ab_0
  - colorama=0.4.6=pyhd8ed1ab_0
  - comm=0.2.1=pyhd8ed1ab_0
  - contourpy=1.2.0=py312h8572e83_0
  - curl=8.5.0=hca28451_0
  - cycler=0.12.1=pyhd8ed1ab_0
  - cytoolz=0.12.3=py312h98912ed_0
  - dask=2024.2.1=pyhd8ed1ab_0
  - dask-core=2024.2.1=pyhd8ed1ab_0
  - dask-image=2023.8.1=pyhd8ed1ab_0
  - dav1d=1.2.1=hd590300_0
  - debugpy=1.8.1=py312h30efb56_0
  - decorator=5.1.1=pyhd8ed1ab_0
  - defusedxml=0.7.1=pyhd8ed1ab_0
  - distributed=2024.2.1=pyhd8ed1ab_0
  - docrep=0.3.2=pyh44b312d_0
  - entrypoints=0.4=pyhd8ed1ab_0
  - exceptiongroup=1.2.0=pyhd8ed1ab_2
  - executing=2.0.1=pyhd8ed1ab_0
  - expat=2.5.0=hcb278e6_1
  - fasteners=0.17.3=pyhd8ed1ab_0
  - font-ttf-dejavu-sans-mono=2.37=hab24e00_0
  - font-ttf-inconsolata=3.000=h77eed37_0
  - font-ttf-source-code-pro=2.038=h77eed37_0
  - font-ttf-ubuntu=0.83=h77eed37_1
  - fontconfig=2.14.2=h14ed4e7_0
  - fonts-conda-ecosystem=1=0
  - fonts-conda-forge=1=0
  - fonttools=4.49.0=py312h98912ed_0
  - fqdn=1.5.1=pyhd8ed1ab_0
  - freetype=2.12.1=h267a509_2
  - freexl=2.0.0=h743c826_0
  - fribidi=1.0.10=h36c2ea0_0
  - frozenlist=1.4.1=py312h98912ed_0
  - fsspec=2024.2.0=pyhca7485f_0
  - gcc_impl_linux-64=13.2.0=h338b0a0_4
  - geos=3.12.1=h59595ed_0
  - geotiff=1.7.1=h6b2125f_15
  - get-annotations=0.1.2=pyhd8ed1ab_0
  - gettext=0.21.1=h27087fc_0
  - gflags=2.2.2=he1b5a44_1004
  - gfortran_impl_linux-64=13.2.0=h76e1118_4
  - giflib=5.2.1=h0b41bf4_3
  - glog=0.6.0=h6f12383_0
  - glpk=5.0=h445213a_0
  - gmp=6.3.0=h59595ed_0
  - graphite2=1.3.13=h58526e2_1001
  - gsl=2.7=he838d99_0
  - gxx_impl_linux-64=13.2.0=h338b0a0_4
  - h11=0.14.0=pyhd8ed1ab_0
  - h2=4.1.0=pyhd8ed1ab_0
  - h5py=3.10.0=nompi_py312h1b477d7_101
  - harfbuzz=8.3.0=h3d44ed6_0
  - hdf4=4.2.15=h2a13503_7
  - hdf5=1.14.3=nompi_h4f84152_100
  - hpack=4.0.0=pyh9f0ad1d_0
  - httpcore=1.0.4=pyhd8ed1ab_0
  - httpx=0.27.0=pyhd8ed1ab_0
  - hyperframe=6.0.1=pyhd8ed1ab_0
  - icu=73.2=h59595ed_0
  - idna=3.6=pyhd8ed1ab_0
  - igraph=0.10.9=h153f77b_0
  - imagecodecs=2024.1.1=py312ha6884dc_0
  - imageio=2.34.0=pyh4b66e23_0
  - importlib-metadata=7.0.1=pyha770c72_0
  - importlib_metadata=7.0.1=hd8ed1ab_0
  - importlib_resources=6.1.2=pyhd8ed1ab_0
  - inflect=7.0.0=pyhd8ed1ab_0
  - ipykernel=6.29.3=pyhd33586a_0
  - ipython=8.22.2=pyh707e725_0
  - ipywidgets=8.1.2=pyhd8ed1ab_0
  - isoduration=20.11.0=pyhd8ed1ab_0
  - jedi=0.19.1=pyhd8ed1ab_0
  - jinja2=3.1.3=pyhd8ed1ab_0
  - joblib=1.3.2=pyhd8ed1ab_0
  - jq=1.5=0
  - json-c=0.17=h7ab15ed_0
  - json5=0.9.20=pyhd8ed1ab_0
  - jsonpointer=2.4=py312h7900ff3_3
  - jsonschema=4.21.1=pyhd8ed1ab_0
  - jsonschema-specifications=2023.12.1=pyhd8ed1ab_0
  - jsonschema-with-format-nongpl=4.21.1=pyhd8ed1ab_0
  - jupyter=1.0.0=pyhd8ed1ab_10
  - jupyter-lsp=2.2.3=pyhd8ed1ab_0
  - jupyter_client=8.6.0=pyhd8ed1ab_0
  - jupyter_console=6.6.3=pyhd8ed1ab_0
  - jupyter_core=5.7.1=py312h7900ff3_0
  - jupyter_events=0.9.0=pyhd8ed1ab_0
  - jupyter_server=2.13.0=pyhd8ed1ab_0
  - jupyter_server_terminals=0.5.2=pyhd8ed1ab_0
  - jupyterlab=4.1.2=pyhd8ed1ab_0
  - jupyterlab_pygments=0.3.0=pyhd8ed1ab_1
  - jupyterlab_server=2.25.3=pyhd8ed1ab_0
  - jupyterlab_widgets=3.0.10=pyhd8ed1ab_0
  - jxrlib=1.1=hd590300_3
  - kealib=1.5.3=h2f55d51_0
  - kernel-headers_linux-64=2.6.32=he073ed8_16
  - keyutils=1.6.1=h166bdaf_0
  - kiwisolver=1.4.5=py312h8572e83_1
  - krb5=1.21.2=h659d440_0
  - lazy_loader=0.3=pyhd8ed1ab_0
  - lcms2=2.16=hb7c19ff_0
  - ld_impl_linux-64=2.40=h41732ed_0
  - leidenalg=0.10.2=py312h30efb56_0
  - lerc=4.0.0=h27087fc_0
  - libabseil=20230802.1=cxx17_h59595ed_0
  - libaec=1.1.2=h59595ed_1
  - libarchive=3.7.2=h2aa1ff5_1
  - libarrow=14.0.2=he2c5238_5_cpu
  - libarrow-acero=14.0.2=h59595ed_5_cpu
  - libarrow-dataset=14.0.2=h59595ed_5_cpu
  - libarrow-flight=14.0.2=hdc44a87_5_cpu
  - libarrow-flight-sql=14.0.2=hfbc7f12_5_cpu
  - libarrow-gandiva=14.0.2=hacb8726_5_cpu
  - libarrow-substrait=14.0.2=hfbc7f12_5_cpu
  - libavif16=1.0.4=h1dcd450_1
  - libblas=3.9.0=21_linux64_openblas
  - libboost-headers=1.84.0=ha770c72_0
  - libbrotlicommon=1.1.0=hd590300_1
  - libbrotlidec=1.1.0=hd590300_1
  - libbrotlienc=1.1.0=hd590300_1
  - libcblas=3.9.0=21_linux64_openblas
  - libcrc32c=1.1.2=h9c3ff4c_0
  - libcurl=8.5.0=hca28451_0
  - libdeflate=1.19=hd590300_0
  - libedit=3.1.20191231=he28a2e2_2
  - libev=4.33=hd590300_2
  - libevent=2.1.12=hf998b51_1
  - libexpat=2.5.0=hcb278e6_1
  - libffi=3.4.2=h7f98852_5
  - libgcc=14.2.0=h77fa898_1
  - libgcc-devel_linux-64=13.2.0=ha9c7c90_104
  - libgcc-ng=14.2.0=h69a702a_1
  - libgdal=3.8.3=hcd1fc54_0
  - libgfortran-ng=13.2.0=h69a702a_4
  - libgfortran5=13.2.0=ha4646dd_4
  - libglib=2.78.3=h783c2da_0
  - libgomp=14.2.0=h77fa898_1
  - libgoogle-cloud=2.12.0=hef10d8f_5
  - libgrpc=1.60.0=h74775cd_0
  - libhwloc=2.9.3=default_h554bfaf_1009
  - libiconv=1.17=hd590300_2
  - libjpeg-turbo=3.0.0=hd590300_1
  - libkml=1.3.0=h01aab08_1018
  - liblapack=3.9.0=21_linux64_openblas
  - libleidenalg=0.11.1=h00ab1b0_0
  - libllvm14=14.0.6=hcd5def8_4
  - libllvm15=15.0.7=hb3ce162_4
  - libnetcdf=4.9.2=nompi_h9612171_113
  - libnghttp2=1.58.0=h47da74e_1
  - libnl=3.9.0=hd590300_0
  - libnsl=2.0.1=hd590300_0
  - libnuma=2.0.16=h0b41bf4_1
  - libopenblas=0.3.26=pthreads_h413a1c8_0
  - libparquet=14.0.2=h352af49_5_cpu
  - libpng=1.6.39=h753d276_0
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  - libprotobuf=4.25.1=hf27288f_0
  - libre2-11=2023.06.02=h7a70373_0
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  - libsqlite=3.44.2=h2797004_0
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  - minizip=4.0.4=h0ab5242_0
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  - nbconvert=7.16.2=pyhd8ed1ab_0
  - nbconvert-core=7.16.2=pyhd8ed1ab_0
  - nbconvert-pandoc=7.16.2=pyhd8ed1ab_0
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  - ncurses=6.4=h59595ed_2
  - nest-asyncio=1.6.0=pyhd8ed1ab_0
  - networkx=3.2.1=pyhd8ed1ab_0
  - nlopt=2.7.1=py312h2707f30_5
  - notebook=7.1.1=pyhd8ed1ab_0
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  - nspr=4.35=h27087fc_0
  - nss=3.97=h1d7d5a4_0
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  - numpy=1.26.4=py312heda63a1_0
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  - openjpeg=2.5.0=h488ebb8_3
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  - pysocks=1.7.1=pyha2e5f31_6
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  - python-json-logger=2.0.7=pyhd8ed1ab_0
  - python-tzdata=2024.1=pyhd8ed1ab_0
  - python_abi=3.12=4_cp312
  - pytz=2024.1=pyhd8ed1ab_0
  - pywavelets=1.4.1=py312hc7c0aa3_1
  - pyyaml=6.0.1=py312h98912ed_1
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  - qtconsole-base=5.5.1=pyha770c72_0
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  - r-abind=1.4_5=r43hc72bb7e_1005
  - r-ape=5.8=r43hb424bfc_1
  - r-arrow=14.0.1=r43h59595ed_0
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  - r-assertthat=0.2.1=r43hc72bb7e_4
  - r-backports=1.4.1=r43h57805ef_2
  - r-base=4.3.2=hb8ee39d_2
  - r-base64enc=0.1_3=r43h57805ef_1006
  - r-bayestestr=0.14.0=r43hc72bb7e_0
  - r-beeswarm=0.4.0=r43h57805ef_3
  - r-bh=1.84.0_0=r43hc72bb7e_0
  - r-bit=4.0.5=r43h57805ef_1
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  - tzdata=2023d=h0c530f3_0
  - ucx=1.15.0=h75e419f_3
  - umap-learn=0.5.5=py312h7900ff3_1
  - uri-template=1.3.0=pyhd8ed1ab_0
  - uriparser=0.9.7=hcb278e6_1
  - urllib3=2.2.1=pyhd8ed1ab_0
  - validators=0.22.0=pyhd8ed1ab_0
  - wcwidth=0.2.13=pyhd8ed1ab_0
  - webcolors=1.13=pyhd8ed1ab_0
  - webencodings=0.5.1=pyhd8ed1ab_2
  - websocket-client=1.7.0=pyhd8ed1ab_0
  - wheel=0.42.0=pyhd8ed1ab_0
  - widgetsnbextension=4.0.10=pyhd8ed1ab_0
  - wrapt=1.16.0=py312h98912ed_0
  - xarray=2024.2.0=pyhd8ed1ab_0
  - xerces-c=3.2.5=hac6953d_0
  - xmltodict=0.13.0=pyhd8ed1ab_0
  - xorg-kbproto=1.0.7=h7f98852_1002
  - xorg-libice=1.1.1=hd590300_0
  - xorg-libsm=1.2.4=h7391055_0
  - xorg-libx11=1.8.7=h8ee46fc_0
  - xorg-libxau=1.0.11=hd590300_0
  - xorg-libxdmcp=1.1.3=h7f98852_0
  - xorg-libxext=1.3.4=h0b41bf4_2
  - xorg-libxrender=0.9.11=hd590300_0
  - xorg-libxt=1.3.0=hd590300_1
  - xorg-renderproto=0.11.1=h7f98852_1002
  - xorg-xextproto=7.3.0=h0b41bf4_1003
  - xorg-xproto=7.0.31=h7f98852_1007
  - xyzservices=2023.10.1=pyhd8ed1ab_0
  - xz=5.2.6=h166bdaf_0
  - yaml=0.2.5=h7f98852_2
  - yarl=1.9.4=py312h98912ed_0
  - yq=3.2.3=pyhd8ed1ab_0
  - zarr=2.17.0=pyhd8ed1ab_0
  - zeromq=4.3.5=h59595ed_1
  - zfp=1.0.1=h59595ed_0
  - zict=3.0.0=pyhd8ed1ab_0
  - zipp=3.17.0=pyhd8ed1ab_0
  - zlib=1.2.13=hd590300_5
  - zlib-ng=2.0.7=h0b41bf4_0
  - zstd=1.5.5=hfc55251_0