Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Enable container-based execution without the need to explicitly specify the container call #72

Open
m-wierzba opened this issue Dec 9, 2024 · 1 comment

Comments

@m-wierzba
Copy link
Contributor

m-wierzba commented Dec 9, 2024

The user should be able to initiate container-based execution without the need to explicitly specify singularity run / singularity exec. Instead datalad make should use information (metadata) attached to the dataset that tracks the container and its preconfigured container calls.

This would be a result of a sufficient metadata description. In such a description there would be some level that specifies something like {"use_container": true, "container_runner": "singularity"}. That would enclose any computation in the specified container, without the need to know this beforehand.

@christian-monch
Copy link
Contributor

That would be nice. We should start specifying a "make-target" based on the schemas and vocabulary we are using.

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

No branches or pull requests

2 participants