_pkgdown.yml

template:
  bootstrap: 5
  
url: https://cmu-delphi.github.io/epiprocess/

home:
  links:
  - text: Get the epipredict R package
    href: https://cmu-delphi.github.io/epiprocess/
  - text: Get the covidcast R package
    href: https://cmu-delphi.github.io/covidcast/covidcastR/

articles:
- title: Using the package
  desc: Basic usage and examples.
  navbar: ~
  contents:
  - epiprocess
  - slide
  - growth_rate
  - correlation
  - aggregation
  - outliers
  - archive
  - advanced

repo:
  url:
    home: https://github.com/cmu-delphi/epiprocess/tree/main/
    source: https://github.com/cmu-delphi/epiprocess/blob/main/
    issue: https://github.com/cmu-delphi/epiprocess/issues
    user: https://github.com/


reference:
- title: epi_df basics
  desc: Details on `epi_df` format, and basic functionality.
- contents:
  - matches("epi_df")
- title: epi_*() functions
  desc: Functions that act on `epi_df` objects.
- contents:
  - epi_slide
  - epi_cor
- title: Vector functions
  desc: Functions that act directly on signal variables.
- contents:
  - growth_rate
  - detect_outlr
  - detect_outlr_rm
  - detect_outlr_stl
- title: epi_archive basics
  desc: Details on `epi_archive`, and basic functionality.
- contents:
  - matches("archive")
- title: epix_*() functions
  desc: Functions that act on an `epi_archive` object.
- contents:
  - starts_with("epix")
- title: Example data
- contents:
  - archive_cases_dv_subset
  - incidence_num_outlier_example
  - contains("jhu_csse")
- title: internal
- contents:
  - epiprocess