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Reconstruction fails #23

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mech314 opened this issue Jan 18, 2025 · 0 comments
Open

Reconstruction fails #23

mech314 opened this issue Jan 18, 2025 · 0 comments

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@mech314
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mech314 commented Jan 18, 2025

Hello!

I'm working on reconstructing some tomograms. Out of 8 tilt series reconstruction of 2 series results in an error:
Fit local motion.
Refine tilt aixs and z: 84.31 1.55078e+00
Refine tilt aixs and z: 84.11 1.55447e+00
Refine tilt aixs and z: 83.96 1.16846e+00
Refine tilt aixs and z: 83.81 1.17032e+00
Refine tilt aixs and z: 83.66 1.17230e+00
Refine tilt aixs and z: 83.51 1.17444e+00
Refine tilt aixs and z: 83.41 7.83997e-01

malloc(): invalid next size (unsorted)

Here is my command:

AreTomo3 -InPrefix ./CA1 -InSuffix .mrc -InSkips _ODD,_EVN,_Vol,_CTF -OutDir ./ -AtBin 6 -AtPatch 4 4 -VolZ 1800 -AlignZ 1100.0 -OutImod 1 -Wbp 1 -DarkTol 0.1 -FlipVol 1 -TiltAxis 84.2 -Kv 300 -PixSize 1.965 -TiltCor 1 -Cmd 1 -Wbp 1 -Serial 1 -Gpu 0 1 2 3

I tried different work stations and CUDA versions and I'm getting the same issue.

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