diff --git a/lineage_notes.txt b/lineage_notes.txt index 74fbe039..40ce02b6 100644 --- a/lineage_notes.txt +++ b/lineage_notes.txt @@ -2883,6 +2883,7 @@ JD.1.1.2 Alias of XBB.1.5.102.1.1.2, S:E583D, Ireland/UK, from sars-cov-2-varian JD.1.1.3 Alias of XBB.1.5.102.1.1.3, S:T470N, ORF1a:V1584M, France/Denmark JD.1.2 Alias of XBB.1.5.102.1.2, S:P1162S, Brazil, from sars-cov-2-variants/lineage-proposals#136 JD.2 Alias of XBB.1.5.102.2, ORF1b:H2388Y, G4255A, Brazil +JD.2.1 Alias of XBB.1.5.102.2.1, S:E554K, Brazil XBB.1.5.103 S:F456L (T22928C), S:180/184del, S:N185D, ORF1a:T1437I, ORF7b:C41W, T21357C, Argentina, from #2192 XBB.1.5.104 S:K304Q, USA, from #1798 XBB.1.5.105 S:K304N, USA/Europe diff --git a/lineages.csv b/lineages.csv index 33393016..b9a7fa62 100644 --- a/lineages.csv +++ b/lineages.csv @@ -2467384,20 +2467384,6 @@ Brazil/AM-FIOCRUZ-ILMD2300708/2023,JD.2 Brazil/AM-FIOCRUZ-ILMD2300723/2023,JD.2 Brazil/AM-030501-IEC/2023,JD.2 Brazil/RR23-016041-IEC/2023,JD.2 -Japan/PG-527289/2023,JD.2 -USA/IL-CDC-QDX49773696/2023,JD.2 -USA/OH-ODH-SC3032348/2023,JD.2 -USA/UT-UPHL-230926420941/2023,JD.2 -USA/CA-HLX-STM-CC4EY32RZ/2023,JD.2 -Brazil/AM-019202-IEC/2023,JD.2 -Brazil/AM-030493-IEC/2023,JD.2 -Brazil/RR-020177-IEC/2023,JD.2 -Brazil/AM-FIOCRUZ-ILMD2301753/2023,JD.2 -Brazil/AM-FIOCRUZ-ILMD2301755/2023,JD.2 -Brazil/RR-021819-IEC/2023,JD.2 -Spain/CL-43272/2023,JD.2 -Spain/PV-HUD-70039747/2023,JD.2 -Spain/PV-HUD-70042900/2023,JD.2 Brazil/AM-FIOCRUZ-ILMD2300836/2023,JD.2 Brazil/AM-FIOCRUZ-ILMD2300966/2023,JD.2 Brazil/AM-FIOCRUZ-ILMD2300845/2023,JD.2 @@ -2469769,3 +2469755,21 @@ USA/CA-CDC-QDX84838389/2023,XBB.2.3.17 USA/CA-CDC-LC1051827/2023,XBB.2.3.17 USA/CA-HLX-STM-DRQ924EEU/2023,XBB.2.3.17 USA/CA-CDC-LC1054234/2023,XBB.2.3.17 +Japan/PG-527289/2023,JD.2.1 +USA/IL-CDC-QDX49773696/2023,JD.2.1 +USA/OH-ODH-SC3032348/2023,JD.2.1 +USA/UT-UPHL-230926420941/2023,JD.2.1 +USA/UT-UPHL-231003650964/2023,JD.2.1 +USA/UT-UPHL-231003826399/2023,JD.2.1 +USA/CA-HLX-STM-CC4EY32RZ/2023,JD.2.1 +Brazil/AM-019202-IEC/2023,JD.2.1 +Brazil/AM-030493-IEC/2023,JD.2.1 +Brazil/RR-020177-IEC/2023,JD.2.1 +Brazil/AM-FIOCRUZ-ILMD2301753/2023,JD.2.1 +Brazil/AM-FIOCRUZ-ILMD2301755/2023,JD.2.1 +Brazil/RR-021819-IEC/2023,JD.2.1 +Spain/NC-CHN-01008579/2023,JD.2.1 +Spain/CL-43272/2023,JD.2.1 +Spain/PV-HUD-97095518/2023,JD.2.1 +Spain/PV-HUD-70039747/2023,JD.2.1 +Spain/PV-HUD-70042900/2023,JD.2.1