From 7c4ea682b7fb1a409e4cda8beec6f02d0e25b80e Mon Sep 17 00:00:00 2001 From: Cornelius Roemer Date: Sun, 7 May 2023 12:33:49 +0200 Subject: [PATCH] Designate FL.1.3 (ORF1a:T1881I, ORF1b:M606I, South Korea) with 70 seqs --- lineage_notes.txt | 1 + lineages.csv | 71 ++++++++++++++++++++++++++++++++++++++++++++++- 2 files changed, 71 insertions(+), 1 deletion(-) diff --git a/lineage_notes.txt b/lineage_notes.txt index 48391c44..6d2d9047 100644 --- a/lineage_notes.txt +++ b/lineage_notes.txt @@ -2708,6 +2708,7 @@ XBB.1.9.1 S:F486P (after C11956T), Indonesia/Singapore/Malaysia/England FL.1 Alias of XBB.1.9.1.1, S:701V, ORF1a:G993S FL.1.1 Alias of XBB.1.9.1.1.1, ORF1b:Q2635P, USA/Australia FL.1.2 Alias of XBB.1.9.1.1.2, ORF1a:T4311I, South Korea/Italy/Spain +FL.1.3 Alias of XBB.1.9.1.1.3, ORF1a:T1881I, ORF1b:M606I, South Korea FL.2 Alias of XBB.1.9.1.2, T4579A FL.2.1 Alias of XBB.1.9.1.2.1, C10228T, Germany, global FL.2.2 Alias of XBB.1.9.1.2.2, S:T478R, Indonesia, from #1927 diff --git a/lineages.csv b/lineages.csv index 215f8521..5aae9b97 100644 --- a/lineages.csv +++ b/lineages.csv @@ -2359370,7 +2359370,6 @@ BHR/890862427/2023,FL.1 Israel/ICH-741196069/2023,FL.1 Oman/5233928/2023,FL.1 Austria/LB-R00127-S202/2023,FL.1 -Singapore/R18MR111/2023,FL.1 Netherlands/GE-RIVM-127025/2023,FL.1 Japan/PG-459082/2023,FL.1 SouthKorea/KDCA219540/2023,FL.1 @@ -2397093,3 +2397092,73 @@ Spain/CT-HUGTiP-D8R133/2023,FL.1.2 Spain/CT-HUGTiP-E1R134/2023,FL.1.2 Spain/CT-HUGTiP-E2R134/2023,FL.1.2 Spain/CT-HUGTiP-C3R134/2023,FL.1.2 +Japan/IC-16490/2023,FL.1.3 +Singapore/R18MR111/2023,FL.1.3 +Canada/NB-CHUDGLD-10D23-MM00012R/2023,FL.1.3 +USA/TX-CDC-QDX48956395/2023,FL.1.3 +Austria/AGES-1134718/2023,FL.1.3 +Austria/AGES-1135646/2023,FL.1.3 +Austria/AGES-1135653/2023,FL.1.3 +Switzerland/TI-EOC-22_27890891/2023,FL.1.3 +SouthKorea/KDCA227531/2023,FL.1.3 +Australia/NSW-ICPMR-45946/2023,FL.1.3 +Austria/AGES-1134612/2023,FL.1.3 +SouthKorea/KDCA231296/2023,FL.1.3 +Netherlands/NH-AUMC-001192/2023,FL.1.3 +SouthKorea/KDCA229205/2023,FL.1.3 +SouthKorea/KDCA229296/2023,FL.1.3 +SouthKorea/KDCA228593/2023,FL.1.3 +SouthKorea/KDCA230383/2023,FL.1.3 +SouthKorea/KDCA230555/2023,FL.1.3 +SouthKorea/KDCA230331/2023,FL.1.3 +SouthKorea/KDCA230148/2023,FL.1.3 +Anhui/LACDC-044/2023,FL.1.3 +SouthKorea/KDCA231764/2023,FL.1.3 +SouthKorea/KDCA228546/2023,FL.1.3 +SouthKorea/KDCA232217/2023,FL.1.3 +SouthKorea/KDCA226145/2023,FL.1.3 +SouthKorea/KDCA232484/2023,FL.1.3 +SouthKorea/KDCA232389/2023,FL.1.3 +SouthKorea/KDCA232218/2023,FL.1.3 +SouthKorea/KDCA231960/2023,FL.1.3 +SouthKorea/KDCA231919/2023,FL.1.3 +SouthKorea/KDCA232652/2023,FL.1.3 +SouthKorea/KDCA230676/2023,FL.1.3 +SouthKorea/KDCA228596/2023,FL.1.3 +SouthKorea/KDCA231674/2023,FL.1.3 +SouthKorea/KDCA225991/2023,FL.1.3 +SouthKorea/KDCA225930/2023,FL.1.3 +SouthKorea/KDCA226482/2023,FL.1.3 +SouthKorea/KDCA226413/2023,FL.1.3 +SouthKorea/KDCA226495/2023,FL.1.3 +SouthKorea/KDCA227457/2023,FL.1.3 +SouthKorea/KDCA226635/2023,FL.1.3 +SouthKorea/KDCA226572/2023,FL.1.3 +SouthKorea/KDCA227315/2023,FL.1.3 +SouthKorea/KDCA227310/2023,FL.1.3 +SouthKorea/KDCA228730/2023,FL.1.3 +SouthKorea/KDCA228161/2023,FL.1.3 +SouthKorea/KDCA229346/2023,FL.1.3 +SouthKorea/KDCA228285/2023,FL.1.3 +SouthKorea/KDCA226578/2023,FL.1.3 +SouthKorea/KDCA226504/2023,FL.1.3 +SouthKorea/KDCA227106/2023,FL.1.3 +SouthKorea/KDCA226720/2023,FL.1.3 +SouthKorea/KDCA227107/2023,FL.1.3 +SouthKorea/KDCA226580/2023,FL.1.3 +SouthKorea/KDCA229510/2023,FL.1.3 +SouthKorea/KDCA229985/2023,FL.1.3 +SouthKorea/KDCA229982/2023,FL.1.3 +SouthKorea/KDCA231940/2023,FL.1.3 +SouthKorea/KDCA231933/2023,FL.1.3 +SouthKorea/KDCA230215/2023,FL.1.3 +SouthKorea/KDCA231202/2023,FL.1.3 +SouthKorea/KDCA230173/2023,FL.1.3 +Japan/PG-471145/2023,FL.1.3 +SouthKorea/KDCA232725/2023,FL.1.3 +SouthKorea/KDCA230234/2023,FL.1.3 +SouthKorea/KDCA232506/2023,FL.1.3 +SouthKorea/KDCA231174/2023,FL.1.3 +SouthKorea/KDCA230159/2023,FL.1.3 +SouthKorea/KDCA229333/2023,FL.1.3 +SouthKorea/KDCA231589/2023,FL.1.3