mamba 1.1.0 ImportError:libstdc++.so.6: version `GLIBCXX_3.4.26' not found (py3.10)

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Solution to issue cannot be found in the documentation.

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Issue

ImportError: /home/hit-master/software/miniconda3/lib/python3.10/site-packages/libmambapy/../../../libstdc++.so.6: version `GLIBCXX_3.4.26' not found (required by /home/hit-master/software/miniconda3/lib/python3.10/site-packages/libmambapy/bindings.cpython-310-x86_64-linux-gnu.so)

Installed packages

_libgcc_mutex             0.1                 conda_forge    conda-forge
_openmp_mutex             4.5                  2_kmp_llvm    conda-forge
aioeasywebdav             2.4.0              pyha770c72_0    conda-forge
aiohttp                   3.8.4           py310h1fa729e_0    conda-forge
aiosignal                 1.3.1              pyhd8ed1ab_0    conda-forge
alsa-lib                  1.2.8                h166bdaf_0    conda-forge
amply                     0.1.5              pyhd8ed1ab_0    conda-forge
anyio                     3.7.0              pyhd8ed1ab_1    conda-forge
appdirs                   1.4.4              pyh9f0ad1d_0    conda-forge
argcomplete               3.0.8              pyhd8ed1ab_0    conda-forge
argh                      0.27.2             pyhd8ed1ab_0    conda-forge
argon2-cffi               21.3.0             pyhd8ed1ab_0    conda-forge
argon2-cffi-bindings      21.2.0          py310h5764c6d_3    conda-forge
argtable2                 2.13              h14c3975_1001    conda-forge
asciitree                 0.3.3                      py_2    conda-forge
aspera-cli                3.9.6                h5e1937b_0    hcc
asttokens                 2.2.1              pyhd8ed1ab_0    conda-forge
async-lru                 2.0.2              pyhd8ed1ab_0    conda-forge
async-timeout             4.0.2              pyhd8ed1ab_0    conda-forge
atk-1.0                   2.38.0               hd4edc92_1    conda-forge
attmap                    0.13.2             pyhd8ed1ab_0    conda-forge
attr                      2.5.1                h166bdaf_1    conda-forge
attrs                     23.1.0             pyh71513ae_1    conda-forge
aws-c-auth                0.6.27               he072965_1    conda-forge
aws-c-cal                 0.5.26               hf677bf3_1    conda-forge
aws-c-common              0.8.19               hd590300_0    conda-forge
aws-c-compression         0.2.16               hbad4bc6_7    conda-forge
aws-c-event-stream        0.2.20               hb4b372c_7    conda-forge
aws-c-http                0.7.7                h2632f9a_4    conda-forge
aws-c-io                  0.13.21              h9fef7b8_5    conda-forge
aws-c-mqtt                0.8.11               h2282364_1    conda-forge
aws-c-s3                  0.3.0                hcb5a9b2_2    conda-forge
aws-c-sdkutils            0.1.9                hbad4bc6_2    conda-forge
aws-checksums             0.1.14               hbad4bc6_7    conda-forge
aws-crt-cpp               0.20.2               he0fdcb3_0    conda-forge
aws-sdk-cpp               1.10.57             h059227d_13    conda-forge
babel                     2.12.1             pyhd8ed1ab_1    conda-forge
backcall                  0.2.0              pyh9f0ad1d_0    conda-forge
backports                 1.0                pyhd8ed1ab_3    conda-forge
backports.functools_lru_cache 1.6.4              pyhd8ed1ab_0    conda-forge
bamtools                  2.5.2                hdcf5f25_2    bioconda
bcftools                  1.17                 h3cc50cf_1    bioconda
bcrypt                    3.2.2           py310h5764c6d_1    conda-forge
beautifulsoup4            4.12.2             pyha770c72_0    conda-forge
bedtools                  2.31.0               hf5e1c6e_2    bioconda
biopython                 1.81            py310h1fa729e_0    conda-forge
bismark                   0.24.1               hdfd78af_0    bioconda
blast                     2.14.0               h7d5a4b4_1    bioconda
bleach                    6.0.0              pyhd8ed1ab_0    conda-forge
blosc                     1.21.4               h0f2a231_0    conda-forge
bokeh                     3.1.1              pyhd8ed1ab_0    conda-forge
boltons                   23.0.0          py310h06a4308_0  
boto3                     1.26.148           pyhd8ed1ab_0    conda-forge
botocore                  1.29.148           pyhd8ed1ab_0    conda-forge
bowtie                    1.3.1           py310h4070885_4    bioconda
bowtie2                   2.5.1           py310h8d7afc0_0    bioconda
brotli                    1.0.9                h166bdaf_8    conda-forge
brotli-bin                1.0.9                h166bdaf_8    conda-forge
brotlipy                  0.7.0           py310h7f8727e_1002  
bwa                       0.7.17              he4a0461_11    bioconda
bzip2                     1.0.8                h7b6447c_0  
c-ares                    1.19.1               hd590300_0    conda-forge
c-blosc2                  2.9.2                hb4ffafa_0    conda-forge
ca-certificates           2023.7.22            hbcca054_0    conda-forge
cached-property           1.5.2                hd8ed1ab_1    conda-forge
cached_property           1.5.2              pyha770c72_1    conda-forge
cachetools                5.3.0              pyhd8ed1ab_0    conda-forge
cairo                     1.16.0               hb05425b_5  
certifi                   2023.7.22          pyhd8ed1ab_0    conda-forge
cffi                      1.15.1          py310h5eee18b_3  
charset-normalizer        2.0.4              pyhd3eb1b0_0  
click                     8.1.3           unix_pyhd8ed1ab_2    conda-forge
cloudpickle               2.2.1              pyhd8ed1ab_0    conda-forge
clustalo                  1.2.4                hdbdd923_7    bioconda
coin-or-cbc               2.10.10              h9002f0b_0    conda-forge
coin-or-cgl               0.60.7               h516709c_0    conda-forge
coin-or-clp               1.17.8               h1ee7a9c_0    conda-forge
coin-or-osi               0.108.8              ha2443b9_0    conda-forge
coin-or-utils             2.11.9               hee58242_0    conda-forge
coincbc                   2.10.10           0_metapackage    conda-forge
colorama                  0.4.6              pyhd8ed1ab_0    conda-forge
coloredlogs               15.0.1             pyhd8ed1ab_3    conda-forge
colormath                 3.0.0                      py_2    conda-forge
comm                      0.1.3              pyhd8ed1ab_0    conda-forge
conda                     23.3.1          py310hff52083_0    conda-forge
conda-content-trust       0.1.3           py310h06a4308_0  
conda-package-handling    2.0.2           py310h06a4308_0  
conda-package-streaming   0.7.0           py310h06a4308_0  
configargparse            1.5.3              pyhd8ed1ab_0    conda-forge
connection_pool           0.0.3              pyhd3deb0d_0    conda-forge
contourpy                 1.0.7           py310hdf3cbec_0    conda-forge
cooler                    0.9.2              pyh7cba7a3_0    bioconda
coreutils                 8.25                          1    bioconda
cryptography              38.0.4          py310h600f1e7_0    conda-forge
curl                      8.1.2                h409715c_0    conda-forge
cutadapt                  4.4             py310h4b81fae_1    bioconda
cycler                    0.11.0             pyhd8ed1ab_0    conda-forge
cytoolz                   0.12.0          py310h5764c6d_1    conda-forge
dask                      2023.5.1           pyhd8ed1ab_0    conda-forge
dask-core                 2023.5.1           pyhd8ed1ab_0    conda-forge
datrie                    0.8.2           py310h5764c6d_6    conda-forge
dbus                      1.13.18              hb2f20db_0  
debugpy                   1.6.7           py310heca2aa9_0    conda-forge
decorator                 5.1.1              pyhd8ed1ab_0    conda-forge
deeptools                 3.5.2              pyhdfd78af_0    bioconda
deeptoolsintervals        0.1.9           py310h1425a21_4    bioconda
defusedxml                0.7.1              pyhd8ed1ab_0    conda-forge
dill                      0.3.6              pyhd8ed1ab_1    conda-forge
distributed               2023.5.1           pyhd8ed1ab_0    conda-forge
dnaio                     0.10.0          py310h4b81fae_3    bioconda
docutils                  0.20.1          py310hff52083_0    conda-forge
dpath                     2.1.6              pyha770c72_0    conda-forge
dropbox                   11.36.0            pyhd8ed1ab_0    conda-forge
eigen                     3.4.0                h4bd325d_0    conda-forge
entrez-direct             16.2                 he881be0_1    bioconda
entrypoints               0.4                pyhd8ed1ab_0    conda-forge
exceptiongroup            1.1.1              pyhd8ed1ab_0    conda-forge
executing                 1.2.0              pyhd8ed1ab_0    conda-forge
expat                     2.5.0                hcb278e6_1    conda-forge
fastqc                    0.12.1               hdfd78af_0    bioconda
filechunkio               1.8                        py_2    conda-forge
filelock                  3.12.0             pyhd8ed1ab_0    conda-forge
fit_nbinom                1.1                pyh864c0ab_2    bioconda
flit-core                 3.9.0              pyhd8ed1ab_0    conda-forge
fmt                       9.1.0                h924138e_0    conda-forge
font-ttf-dejavu-sans-mono 2.37                 hab24e00_0    conda-forge
font-ttf-inconsolata      3.000                h77eed37_0    conda-forge
font-ttf-source-code-pro  2.038                h77eed37_0    conda-forge
font-ttf-ubuntu           0.83                 hab24e00_0    conda-forge
fontconfig                2.14.2               h14ed4e7_0    conda-forge
fonts-conda-ecosystem     1                             0    conda-forge
fonts-conda-forge         1                             0    conda-forge
fonttools                 4.39.4          py310h2372a71_0    conda-forge
freetype                  2.12.1               hca18f0e_1    conda-forge
fribidi                   1.0.10               h36c2ea0_0    conda-forge
frozenlist                1.3.3           py310h5764c6d_0    conda-forge
fsspec                    2023.5.0           pyh1a96a4e_0    conda-forge
ftputil                   5.0.4              pyhd8ed1ab_0    conda-forge
future                    0.18.3             pyhd8ed1ab_0    conda-forge
gdal                      3.2.2.1                  pypi_0    pypi
gdk-pixbuf                2.42.6               h04a7f16_0    conda-forge
gettext                   0.21.1               h27087fc_0    conda-forge
gffutils                  0.11.1             pyh7cba7a3_0    bioconda
gflags                    2.2.2             he1b5a44_1004    conda-forge
ghostscript               9.18                          1    bioconda
giflib                    5.2.1                h0b41bf4_3    conda-forge
gitdb                     4.0.10             pyhd8ed1ab_0    conda-forge
gitpython                 3.1.31             pyhd8ed1ab_0    conda-forge
glib                      2.76.3               hfc55251_0    conda-forge
glib-tools                2.76.3               hfc55251_0    conda-forge
glog                      0.6.0                h6f12383_0    conda-forge
google-api-core           2.11.0             pyhd8ed1ab_0    conda-forge
google-api-python-client  2.88.0             pyhd8ed1ab_0    conda-forge
google-auth               2.19.1             pyh1a96a4e_0    conda-forge
google-auth-httplib2      0.1.0              pyhd8ed1ab_1    conda-forge
google-cloud-core         2.3.2              pyhd8ed1ab_0    conda-forge
google-cloud-storage      2.9.0              pyh1a96a4e_0    conda-forge
google-crc32c             1.1.2           py310he8fe98e_4    conda-forge
google-resumable-media    2.5.0              pyhd8ed1ab_0    conda-forge
googleapis-common-protos  1.57.1             pyhd8ed1ab_0    conda-forge
graphite2                 1.3.13            h58526e2_1001    conda-forge
graphviz                  2.47.1               hebd9034_0    conda-forge
grpcio                    1.54.2          py310heca2aa9_2    conda-forge
gsl                       2.7                  he838d99_0    conda-forge
gst-plugins-base          1.14.1               h6a678d5_1  
gstreamer                 1.14.1               h5eee18b_1  
gtk2                      2.24.33              hab0c2f8_0    conda-forge
gts                       0.7.6                h64030ff_2    conda-forge
h5py                      3.8.0           nompi_py310ha66b2ad_101    conda-forge
harfbuzz                  2.4.0                h37c48d4_1    conda-forge
hdf5                      1.14.0          nompi_hb72d44e_103    conda-forge
hic2cool                  0.8.3              pyh864c0ab_2    bioconda
hicexplorer               3.5.1                      py_0    bioconda
hicmatrix                 17                 pyhdfd78af_0    bioconda
hisat2                    2.2.1                hdbdd923_6    bioconda
htop                      3.2.2                h8228510_0    conda-forge
htslib                    1.17                 h81da01d_2    bioconda
httplib2                  0.22.0             pyhd8ed1ab_0    conda-forge
humanfriendly             10.0            py310hff52083_4    conda-forge
hyperopt                  0.2.7              pyhd8ed1ab_0    conda-forge
icu                       58.2              hf484d3e_1000    conda-forge
idna                      3.4             py310h06a4308_0  
importlib-metadata        6.6.0              pyha770c72_0    conda-forge
importlib_metadata        6.6.0                hd8ed1ab_0    conda-forge
importlib_resources       5.12.0             pyhd8ed1ab_0    conda-forge
iniconfig                 2.0.0              pyhd8ed1ab_0    conda-forge
intervaltree              3.1.0              pyhd8ed1ab_1    conda-forge
ipykernel                 6.23.1             pyh210e3f2_0    conda-forge
ipython                   8.14.0             pyh41d4057_0    conda-forge
ipython_genutils          0.2.0                      py_1    conda-forge
ipywidgets                8.0.6              pyhd8ed1ab_0    conda-forge
isa-l                     2.30.0               ha770c72_4    conda-forge
jedi                      0.18.2             pyhd8ed1ab_0    conda-forge
jinja2                    3.1.2              pyhd8ed1ab_1    conda-forge
jmespath                  1.0.1              pyhd8ed1ab_0    conda-forge
jpeg                      9e                   h166bdaf_2    conda-forge
json5                     0.9.5              pyh9f0ad1d_0    conda-forge
jsonpatch                 1.32               pyhd3eb1b0_0  
jsonpointer               2.1                pyhd3eb1b0_0  
jsonschema                4.17.3             pyhd8ed1ab_0    conda-forge
jupyter                   1.0.0           py310hff52083_8    conda-forge
jupyter-lsp               2.2.0              pyhd8ed1ab_0    conda-forge
jupyter_client            8.2.0              pyhd8ed1ab_0    conda-forge
jupyter_console           6.6.3              pyhd8ed1ab_0    conda-forge
jupyter_core              5.3.0           py310hff52083_0    conda-forge
jupyter_events            0.6.3              pyhd8ed1ab_0    conda-forge
jupyter_server            2.6.0              pyhd8ed1ab_0    conda-forge
jupyter_server_terminals  0.4.4              pyhd8ed1ab_1    conda-forge
jupyterlab                4.0.1              pyhd8ed1ab_0    conda-forge
jupyterlab_pygments       0.2.2              pyhd8ed1ab_0    conda-forge
jupyterlab_server         2.22.1             pyhd8ed1ab_0    conda-forge
jupyterlab_widgets        3.0.7              pyhd8ed1ab_1    conda-forge
k8                        0.2.5                hdcf5f25_4    bioconda
keyutils                  1.6.1                h166bdaf_0    conda-forge
kiwisolver                1.4.4           py310hbf28c38_1    conda-forge
krb5                      1.20.1               h81ceb04_0    conda-forge
krbalancing               0.0.5           py310h0dbaff4_7    bioconda
lame                      3.100             h166bdaf_1003    conda-forge
lcms2                     2.12                 hddcbb42_0    conda-forge
ld_impl_linux-64          2.38                 h1181459_1  
ldc                       1.28.1               hcf88599_0    conda-forge
lerc                      4.0.0                h27087fc_0    conda-forge
libabseil                 20230125.2      cxx17_h59595ed_2    conda-forge
libaec                    1.0.6                hcb278e6_1    conda-forge
libarchive                3.5.2                hada088e_3    conda-forge
libarrow                  12.0.0           hed73b3e_6_cpu    conda-forge
libblas                   3.9.0           17_linux64_openblas    conda-forge
libbrotlicommon           1.0.9                h166bdaf_8    conda-forge
libbrotlidec              1.0.9                h166bdaf_8    conda-forge
libbrotlienc              1.0.9                h166bdaf_8    conda-forge
libcap                    2.67                 he9d0100_0    conda-forge
libcblas                  3.9.0           17_linux64_openblas    conda-forge
libclang                  14.0.6          default_h7634d5b_1    conda-forge
libclang13                14.0.6          default_h9986a30_1    conda-forge
libcrc32c                 1.1.2                h9c3ff4c_0    conda-forge
libcups                   2.3.3                h36d4200_3    conda-forge
libcurl                   8.1.2                h409715c_0    conda-forge
libdeflate                1.18                 h0b41bf4_0    conda-forge
libedit                   3.1.20191231         he28a2e2_2    conda-forge
libev                     4.33                 h516909a_1    conda-forge
libevent                  2.1.12               hf998b51_1    conda-forge
libexpat                  2.5.0                hcb278e6_1    conda-forge
libffi                    3.4.2                h6a678d5_6  
libflac                   1.4.2                h27087fc_0    conda-forge
libgcc                    7.2.0                h69d50b8_2    conda-forge
libgcc-ng                 13.1.0               he5830b7_0    conda-forge
libgcrypt                 1.10.1               h166bdaf_0    conda-forge
libgd                     2.3.3                h6a678d5_3  
libgfortran-ng            13.1.0               h69a702a_0    conda-forge
libgfortran5              13.1.0               h15d22d2_0    conda-forge
libglib                   2.76.3               hebfc3b9_0    conda-forge
libgoogle-cloud           2.11.0               hac9eb74_1    conda-forge
libgpg-error              1.46                 h620e276_0    conda-forge
libgrpc                   1.54.2               hb20ce57_2    conda-forge
libhwloc                  2.8.0                h32351e8_1    conda-forge
libiconv                  1.17                 h166bdaf_0    conda-forge
libidn2                   2.3.4                h166bdaf_0    conda-forge
libjpeg-turbo             2.1.4                h166bdaf_0    conda-forge
liblapack                 3.9.0           17_linux64_openblas    conda-forge
liblapacke                3.9.0           17_linux64_openblas    conda-forge
libllvm12                 12.0.1               hf817b99_2    conda-forge
libllvm14                 14.0.6               hcd5def8_4    conda-forge
libllvm15                 15.0.3               h503ea73_0    conda-forge
libmamba                  1.1.0                h70b1f8a_2    conda-forge
libmambapy                1.1.0           py310h69aa5bf_2    conda-forge
libnghttp2                1.52.0               h61bc06f_0    conda-forge
libnl                     3.7.0                h166bdaf_0    conda-forge
libnsl                    2.0.0                h7f98852_0    conda-forge
libnuma                   2.0.16               h0b41bf4_1    conda-forge
libogg                    1.3.4                h7f98852_1    conda-forge
libopenblas               0.3.23          pthreads_h80387f5_0    conda-forge
libopus                   1.3.1                h7f98852_1    conda-forge
libpng                    1.6.39               h753d276_0    conda-forge
libpq                     12.15                hdbd6064_1  
libprotobuf               3.21.12              h3eb15da_0    conda-forge
librsvg                   2.50.3               hfa39831_1    conda-forge
libsndfile                1.2.0                hb75c966_0    conda-forge
libsodium                 1.0.18               h36c2ea0_1    conda-forge
libsolv                   0.7.24               h3eb15da_0    conda-forge
libsqlite                 3.42.0               h2797004_0    conda-forge
libssh2                   1.11.0               h0841786_0    conda-forge
libstdcxx-ng              13.1.0               hfd8a6a1_0    conda-forge
libsystemd0               253                  h8c4010b_1    conda-forge
libthrift                 0.18.1               h8fd135c_2    conda-forge
libtiff                   4.2.0                hf544144_3    conda-forge
libtool                   2.4.7                h27087fc_0    conda-forge
libunistring              0.9.10               h7f98852_0    conda-forge
libutf8proc               2.8.0                h166bdaf_0    conda-forge
libuuid                   2.38.1               h0b41bf4_0    conda-forge
libuv                     1.44.2               h166bdaf_0    conda-forge
libvorbis                 1.3.7                h9c3ff4c_0    conda-forge
libwebp                   1.2.4                h11a3e52_1  
libwebp-base              1.2.4                h166bdaf_0    conda-forge
libxcb                    1.15                 h0b41bf4_0    conda-forge
libxkbcommon              1.0.3                he3ba5ed_0    conda-forge
libxml2                   2.9.14               h74e7548_0  
libzlib                   1.2.13               h166bdaf_4    conda-forge
llvm-openmp               16.0.5               h4dfa4b3_0    conda-forge
locket                    1.0.0              pyhd8ed1ab_0    conda-forge
logmuse                   0.2.6              pyh8c360ce_0    conda-forge
lz4                       4.3.2           py310h0cfdcf0_0    conda-forge
lz4-c                     1.9.4                hcb278e6_0    conda-forge
lzo                       2.10              h516909a_1000    conda-forge
lzstring                  1.0.4                   py_1001    conda-forge
mamba                     1.1.0           py310h51d5547_2    conda-forge
markdown                  3.4.3              pyhd8ed1ab_0    conda-forge
markdown-it-py            2.2.0              pyhd8ed1ab_0    conda-forge
markupsafe                2.1.3           py310h2372a71_0    conda-forge
matplotlib                3.7.1           py310hff52083_0    conda-forge
matplotlib-base           3.7.1           py310he60537e_0    conda-forge
matplotlib-inline         0.1.6              pyhd8ed1ab_0    conda-forge
mdurl                     0.1.0              pyhd8ed1ab_0    conda-forge
minimap2                  2.26                 he4a0461_1    bioconda
mistune                   2.0.5              pyhd8ed1ab_0    conda-forge
mpg123                    1.31.3               hcb278e6_0    conda-forge
msgpack-python            1.0.5           py310hdf3cbec_0    conda-forge
multidict                 6.0.4           py310h1fa729e_0    conda-forge
multiprocess              0.70.14         py310h5764c6d_3    conda-forge
multiqc                   1.14               pyhdfd78af_0    bioconda
munkres                   1.0.7                      py_1    bioconda
mysql                     5.7.20            hf484d3e_1001    conda-forge
mysql-common              8.0.32               hf1915f5_2    conda-forge
mysql-libs                8.0.32               hca2cd23_2    conda-forge
nbclassic                 1.0.0              pyhb4ecaf3_1    conda-forge
nbclient                  0.8.0              pyhd8ed1ab_0    conda-forge
nbconvert                 7.4.0              pyhd8ed1ab_0    conda-forge
nbconvert-core            7.4.0              pyhd8ed1ab_0    conda-forge
nbconvert-pandoc          7.4.0              pyhd8ed1ab_0    conda-forge
nbformat                  5.9.0              pyhd8ed1ab_0    conda-forge
ncbi-vdb                  3.0.8                hdbdd923_0    bioconda
ncdu                      1.16                 h46c0cb4_0    conda-forge
ncurses                   6.4                  hcb278e6_0    conda-forge
nest-asyncio              1.5.6              pyhd8ed1ab_0    conda-forge
networkx                  3.1                pyhd8ed1ab_0    conda-forge
nodejs                    12.4.0               he1b5a44_0    conda-forge
nomkl                     1.0                  h5ca1d4c_0    conda-forge
notebook                  6.5.4              pyha770c72_0    conda-forge
notebook-shim             0.2.3              pyhd8ed1ab_0    conda-forge
nspr                      4.35                 h27087fc_0    conda-forge
nss                       3.89                 he45b914_0    conda-forge
numexpr                   2.8.4           py310h690d005_100    conda-forge
numpy                     1.23.5          py310h53a5b5f_0    conda-forge
oauth2client              4.1.3                      py_0    conda-forge
openjdk                   11.0.1            h516909a_1016    conda-forge
openjpeg                  2.4.0                hb52868f_1    conda-forge
openssl                   3.1.3                hd590300_0    conda-forge
orc                       1.8.3                h2f23424_1    conda-forge
ossuuid                   1.6.2             hf484d3e_1000    conda-forge
overrides                 7.3.1              pyhd8ed1ab_0    conda-forge
packaging                 23.0            py310h06a4308_0  
pairix                    0.3.7           py310h83093d7_5    bioconda
pandarallel               1.6.5              pyhd8ed1ab_0    conda-forge
pandas                    2.0.2           py310h7cbd5c2_0    conda-forge
pandoc                    2.19.2               h32600fe_2    conda-forge
pandocfilters             1.5.0              pyhd8ed1ab_0    conda-forge
pango                     1.42.4               h7062337_4    conda-forge
parallel-fastq-dump       0.6.7              pyhdfd78af_0    bioconda
paramiko                  3.2.0              pyhd8ed1ab_0    conda-forge
parso                     0.8.3              pyhd8ed1ab_0    conda-forge
partd                     1.4.0              pyhd8ed1ab_0    conda-forge
pbzip2                    1.1.13                        0    conda-forge
pcre                      8.45                 h9c3ff4c_0    conda-forge
pcre2                     10.40                hc3806b6_0    conda-forge
peppy                     0.35.5             pyhd8ed1ab_0    conda-forge
perl                      5.32.1          2_h7f98852_perl5    conda-forge
perl-alien-build          2.48            pl5321hec16e2b_0    bioconda
perl-alien-libxml2        0.17            pl5321hec16e2b_0    bioconda
perl-archive-tar          2.40            pl5321hdfd78af_0    bioconda
perl-business-isbn        3.007           pl5321hdfd78af_0    bioconda
perl-business-isbn-data   20210112.006    pl5321hdfd78af_0    bioconda
perl-capture-tiny         0.48            pl5321hdfd78af_2    bioconda
perl-carp                 1.38            pl5321hdfd78af_4    bioconda
perl-common-sense         3.75            pl5321hdfd78af_0    bioconda
perl-compress-raw-bzip2   2.201           pl5321h87f3376_1    bioconda
perl-compress-raw-zlib    2.105           pl5321h87f3376_0    bioconda
perl-constant             1.33            pl5321hdfd78af_2    bioconda
perl-data-dumper          2.183           pl5321hec16e2b_1    bioconda
perl-encode               3.19            pl5321hec16e2b_1    bioconda
perl-exporter             5.72            pl5321hdfd78af_2    bioconda
perl-exporter-tiny        1.002002        pl5321hdfd78af_0    bioconda
perl-extutils-makemaker   7.70            pl5321hd8ed1ab_0    conda-forge
perl-ffi-checklib         0.28            pl5321hdfd78af_0    bioconda
perl-file-chdir           0.1010          pl5321hdfd78af_3    bioconda
perl-file-path            2.18            pl5321hd8ed1ab_0    conda-forge
perl-file-temp            0.2304          pl5321hd8ed1ab_0    conda-forge
perl-file-which           1.24            pl5321hd8ed1ab_0    conda-forge
perl-importer             0.026           pl5321hdfd78af_0    bioconda
perl-io-compress          2.201           pl5321hdbdd923_2    bioconda
perl-io-zlib              1.14            pl5321hdfd78af_0    bioconda
perl-json                 4.10            pl5321hdfd78af_0    bioconda
perl-json-xs              2.34            pl5321h4ac6f70_6    bioconda
perl-list-moreutils       0.430           pl5321hdfd78af_0    bioconda
perl-list-moreutils-xs    0.430           pl5321h031d066_2    bioconda
perl-mime-base64          3.16            pl5321hec16e2b_2    bioconda
perl-parent               0.236           pl5321hdfd78af_2    bioconda
perl-path-tiny            0.122           pl5321hdfd78af_0    bioconda
perl-pathtools            3.75            pl5321hec16e2b_3    bioconda
perl-scalar-list-utils    1.62            pl5321hec16e2b_1    bioconda
perl-scope-guard          0.21            pl5321hdfd78af_3    bioconda
perl-sub-info             0.002           pl5321hdfd78af_1    bioconda
perl-term-table           0.016           pl5321hdfd78af_0    bioconda
perl-test2-suite          0.000145        pl5321hdfd78af_0    bioconda
perl-types-serialiser     1.01            pl5321hdfd78af_0    bioconda
perl-uri                  5.12            pl5321hdfd78af_0    bioconda
perl-xml-libxml           2.0207          pl5321h661654b_0    bioconda
perl-xml-namespacesupport 1.12            pl5321hdfd78af_1    bioconda
perl-xml-sax              1.02            pl5321hdfd78af_1    bioconda
perl-xml-sax-base         1.09            pl5321hdfd78af_1    bioconda
pexpect                   4.8.0              pyh1a96a4e_2    conda-forge
pickleshare               0.7.5                   py_1003    conda-forge
pigz                      2.6                  h27826a3_0    conda-forge
pillow                    9.4.0           py310h6a678d5_0  
pip                       23.2.1                   pypi_0    pypi
pixman                    0.40.0               h36c2ea0_0    conda-forge
pkgutil-resolve-name      1.3.10             pyhd8ed1ab_0    conda-forge
plac                      1.3.5              pyhd8ed1ab_0    conda-forge
platformdirs              3.5.1              pyhd8ed1ab_0    conda-forge
plotly                    5.14.1             pyhd8ed1ab_0    conda-forge
pluggy                    1.0.0           py310h06a4308_1  
ply                       3.11                       py_1    conda-forge
pooch                     1.7.0              pyha770c72_3    conda-forge
prettytable               3.7.0              pyhd8ed1ab_0    conda-forge
prometheus_client         0.17.0             pyhd8ed1ab_0    conda-forge
prompt-toolkit            3.0.38             pyha770c72_0    conda-forge
prompt_toolkit            3.0.38               hd8ed1ab_0    conda-forge
protobuf                  4.21.12         py310heca2aa9_0    conda-forge
psutil                    5.9.5           py310h1fa729e_0    conda-forge
pthread-stubs             0.4               h36c2ea0_1001    conda-forge
ptyprocess                0.7.0              pyhd3deb0d_0    conda-forge
pulp                      2.7.0           py310hff52083_0    conda-forge
pulseaudio-client         16.1                 hb77b528_4    conda-forge
pure_eval                 0.2.2              pyhd8ed1ab_0    conda-forge
py-cpuinfo                9.0.0              pyhd8ed1ab_0    conda-forge
py2bit                    0.3.0           py310h4b81fae_8    bioconda
py4j                      0.10.9.7           pyhd8ed1ab_0    conda-forge
pyarrow                   12.0.0          py310he6bfd7f_6_cpu    conda-forge
pyasn1                    0.4.8                      py_0    conda-forge
pyasn1-modules            0.2.7                      py_0    conda-forge
pybedtools                0.9.0           py310h2b6aa90_2    bioconda
pybigwig                  0.3.22          py310h79000e5_1    bioconda
pybind11                  2.10.4          py310hdf3cbec_0    conda-forge
pybind11-abi              4                    hd8ed1ab_3    conda-forge
pybind11-global           2.10.4          py310hdf3cbec_0    conda-forge
pycosat                   0.6.4           py310h5eee18b_0  
pycparser                 2.21               pyhd3eb1b0_0  
pyfaidx                   0.7.2.1            pyh7cba7a3_1    bioconda
pygenometracks            3.3                        py_0    bioconda
pygments                  2.15.1             pyhd8ed1ab_0    conda-forge
pynacl                    1.5.0           py310h5764c6d_2    conda-forge
pyopenssl                 23.0.0          py310h06a4308_0  
pyparsing                 3.0.9              pyhd8ed1ab_0    conda-forge
pyqt                      5.15.4          py310hd8f1fbe_0    conda-forge
pyqt5-sip                 12.9.0          py310hd8f1fbe_0    conda-forge
pyrsistent                0.19.3          py310h1fa729e_0    conda-forge
pysam                     0.21.0          py310h41dec4a_1    bioconda
pysftp                    0.2.9                      py_1    conda-forge
pysocks                   1.7.1           py310h06a4308_0  
pytables                  3.8.0           py310hde6a235_1    conda-forge
pytest                    7.3.1              pyhd8ed1ab_0    conda-forge
python                    3.10.11         he550d4f_0_cpython    conda-forge
python-dateutil           2.8.2              pyhd8ed1ab_0    conda-forge
python-fastjsonschema     2.17.1             pyhd8ed1ab_0    conda-forge
python-graphviz           0.20.1             pyh22cad53_0    conda-forge
python-irodsclient        1.1.8              pyhd8ed1ab_0    conda-forge
python-isal               1.1.0           py310h2372a71_2    conda-forge
python-json-logger        2.0.7              pyhd8ed1ab_0    conda-forge
python-tzdata             2023.3             pyhd8ed1ab_0    conda-forge
python_abi                3.10                    3_cp310    conda-forge
pytz                      2023.3             pyhd8ed1ab_0    conda-forge
pyu2f                     0.1.5              pyhd8ed1ab_0    conda-forge
pyvcf3                    1.0.3              pyhdfd78af_0    bioconda
pyyaml                    6.0             py310h5764c6d_5    conda-forge
pyzmq                     25.1.0          py310h5bbb5d0_0    conda-forge
qt-main                   5.15.2               h7358343_9  
qtconsole                 5.4.3              pyhd8ed1ab_0    conda-forge
qtconsole-base            5.4.3              pyha770c72_0    conda-forge
qtpy                      2.3.1              pyhd8ed1ab_0    conda-forge
rdma-core                 28.9                 h59595ed_1    conda-forge
re2                       2023.03.02           h8c504da_0    conda-forge
readline                  8.2                  h8228510_1    conda-forge
reproc                    14.2.4               h0b41bf4_0    conda-forge
reproc-cpp                14.2.4               hcb278e6_0    conda-forge
requests                  2.28.1          py310h06a4308_1  
reretry                   0.11.8             pyhd8ed1ab_0    conda-forge
rfc3339-validator         0.1.4              pyhd8ed1ab_0    conda-forge
rfc3986-validator         0.1.1              pyh9f0ad1d_0    conda-forge
rich                      13.4.1             pyhd8ed1ab_0    conda-forge
rich-click                1.6.1              pyhd8ed1ab_0    conda-forge
rsa                       4.9                pyhd8ed1ab_0    conda-forge
ruamel.yaml               0.17.21         py310h5eee18b_0  
ruamel.yaml.clib          0.2.6           py310h5eee18b_1  
s2n                       1.3.44               h06160fa_0    conda-forge
s3transfer                0.6.1              pyhd8ed1ab_0    conda-forge
sambamba                  1.0                  h98b6b92_0    bioconda
samclip                   0.4.0                hdfd78af_1    bioconda
samtools                  1.17                 hd87286a_1    bioconda
scipy                     1.10.1          py310ha4c1d20_3    conda-forge
screen                    4.8.0                he28a2e2_0    conda-forge
send2trash                1.8.2              pyh41d4057_0    conda-forge
setuptools                68.0.0                   pypi_0    pypi
setuptools-scm            7.1.0              pyhd8ed1ab_0    conda-forge
simplejson                3.19.1          py310h1fa729e_0    conda-forge
sip                       6.5.1           py310h122e73d_2    conda-forge
six                       1.16.0             pyhd3eb1b0_1  
slacker                   0.14.0                     py_0    conda-forge
smart_open                6.3.0              pyhd8ed1ab_1    conda-forge
smmap                     3.0.5              pyh44b312d_0    conda-forge
snakemake                 7.26.0               hdfd78af_0    bioconda
snakemake-minimal         7.26.0             pyhdfd78af_0    bioconda
snappy                    1.1.10               h9fff704_0    conda-forge
sniffio                   1.3.0              pyhd8ed1ab_0    conda-forge
sortedcontainers          2.4.0              pyhd8ed1ab_0    conda-forge
soupsieve                 2.3.2.post1        pyhd8ed1ab_0    conda-forge
spectra                   0.0.11                     py_1    conda-forge
sqlite                    3.42.0               h2c6b66d_0    conda-forge
sra-tools                 3.0.7                h9f5acd7_0    bioconda
stack_data                0.6.2              pyhd8ed1ab_0    conda-forge
stone                     3.3.1              pyhd8ed1ab_0    conda-forge
stopit                    1.1.2                      py_0    conda-forge
subread                   2.0.3                he4a0461_3    bioconda
tabulate                  0.9.0              pyhd8ed1ab_1    conda-forge
tbb                       2021.7.0             h924138e_1    conda-forge
tblib                     1.7.0              pyhd8ed1ab_0    conda-forge
tenacity                  8.2.2              pyhd8ed1ab_0    conda-forge
terminado                 0.17.1             pyh41d4057_0    conda-forge
throttler                 1.2.1              pyhd8ed1ab_0    conda-forge
tinycss2                  1.2.1              pyhd8ed1ab_0    conda-forge
tk                        8.6.12               h1ccaba5_0  
toml                      0.10.2             pyhd8ed1ab_0    conda-forge
tomli                     2.0.1              pyhd8ed1ab_0    conda-forge
toolz                     0.12.0          py310h06a4308_0  
toposort                  1.10               pyhd8ed1ab_0    conda-forge
tornado                   6.3.2           py310h2372a71_0    conda-forge
tqdm                      4.65.0          py310h2f386ee_0  
traitlets                 5.9.0              pyhd8ed1ab_0    conda-forge
typing-extensions         4.6.3                hd8ed1ab_0    conda-forge
typing_extensions         4.6.3              pyha770c72_0    conda-forge
typing_utils              0.1.0              pyhd8ed1ab_0    conda-forge
tzdata                    2023c                h04d1e81_0  
ubiquerg                  0.6.2              pyhd8ed1ab_0    conda-forge
ucx                       1.14.1               hf587318_2    conda-forge
unicodedata2              15.0.0          py310h5764c6d_0    conda-forge
unidecode                 1.3.6              pyhd8ed1ab_0    conda-forge
uritemplate               4.1.1              pyhd8ed1ab_0    conda-forge
urllib3                   1.26.15         py310h06a4308_0  
vcftools                  0.1.16          pl5321hdcf5f25_9    bioconda
veracitools               0.1.3                      py_0    conda-forge
wcwidth                   0.2.6              pyhd8ed1ab_0    conda-forge
webencodings              0.5.1                      py_1    conda-forge
weblogo                   3.7.9              pyhdfd78af_0    bioconda
websocket-client          1.5.2              pyhd8ed1ab_0    conda-forge
wget                      1.20.3               ha35d2d1_1    conda-forge
wheel                     0.41.0                   pypi_0    pypi
widgetsnbextension        4.0.7              pyhd8ed1ab_0    conda-forge
wrapt                     1.15.0          py310h1fa729e_0    conda-forge
xcb-util                  0.4.0                hd590300_1    conda-forge
xcb-util-image            0.4.0                h8ee46fc_1    conda-forge
xcb-util-keysyms          0.4.0                h8ee46fc_1    conda-forge
xcb-util-renderutil       0.3.9                hd590300_1    conda-forge
xcb-util-wm               0.4.1                h8ee46fc_1    conda-forge
xkeyboard-config          2.38                 h0b41bf4_0    conda-forge
xopen                     1.7.0           py310hff52083_2    conda-forge
xorg-fixesproto           5.0               h7f98852_1002    conda-forge
xorg-inputproto           2.3.2             h7f98852_1002    conda-forge
xorg-kbproto              1.0.7             h7f98852_1002    conda-forge
xorg-libice               1.1.1                hd590300_0    conda-forge
xorg-libsm                1.2.4                h7391055_0    conda-forge
xorg-libx11               1.8.5                h8ee46fc_0    conda-forge
xorg-libxau               1.0.11               hd590300_0    conda-forge
xorg-libxdmcp             1.1.3                h7f98852_0    conda-forge
xorg-libxext              1.3.4                h0b41bf4_2    conda-forge
xorg-libxfixes            5.0.3             h7f98852_1004    conda-forge
xorg-libxi                1.7.10               h7f98852_0    conda-forge
xorg-libxrender           0.9.10            h7f98852_1003    conda-forge
xorg-libxtst              1.2.3             h7f98852_1002    conda-forge
xorg-recordproto          1.14.2            h7f98852_1002    conda-forge
xorg-renderproto          0.11.1            h7f98852_1002    conda-forge
xorg-xextproto            7.3.0             h0b41bf4_1003    conda-forge
xorg-xf86vidmodeproto     2.3.1             h7f98852_1002    conda-forge
xorg-xproto               7.0.31            h7f98852_1007    conda-forge
xyzservices               2023.5.0           pyhd8ed1ab_1    conda-forge
xz                        5.2.10               h5eee18b_1  
yaml                      0.2.5                h7f98852_2    conda-forge
yaml-cpp                  0.7.0                h27087fc_2    conda-forge
yarl                      1.9.2           py310h2372a71_0    conda-forge
yte                       1.5.1              pyha770c72_2    conda-forge
zeromq                    4.3.4                h9c3ff4c_1    conda-forge
zict                      3.0.0              pyhd8ed1ab_0    conda-forge
zipp                      3.15.0             pyhd8ed1ab_0    conda-forge
zlib                      1.2.13               h166bdaf_4    conda-forge
zlib-ng                   2.0.7                h0b41bf4_0    conda-forge
zstandard                 0.19.0          py310h5eee18b_0  
zstd                      1.5.2                h3eb15da_6    conda-forge

Environment info

python 3.10

[wolfv]

What is your OS?

[MoonlightFansty]

What is your OS?

Ubuntu 20.04.6 LTS (GNU/Linux 5.19.11-051911-generic x86_64), Thank you for your time and assistance.

[jjerphan]

Hi @MoonlightFansty,

Has this issue been resolved in the meantime?

[jjerphan]

This must have been resolved. Feel free to reopen if this has not been the case.