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guppy.yml
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name: guppy_cpg_snakemake
channels:
- activisiongamescience
- bioconda
- conda-forge
- defaults
- r
- biobuilds
dependencies:
- _libgcc_mutex=0.1=main
- aioeasywebdav=2.4.0=py36_1000
- aiohttp=3.6.2=py36h516909a_0
- appdirs=1.4.3=py_1
- async-timeout=3.0.1=py_1000
- attrs=19.3.0=py_0
- bcftools=1.9=ha228f0b_4
- bcrypt=3.1.7=py36h8c4c3a4_1
- blas=1.0=mkl
- boto3=1.14.29=pyh9f0ad1d_0
- botocore=1.17.29=pyh9f0ad1d_0
- brotlipy=0.7.0=py36h8c4c3a4_1000
- bzip2=1.0.8=h7b6447c_0
- ca-certificates=2020.6.20=hecda079_0
- cachetools=4.1.1=py_0
- cairo=1.16.0=hcf35c78_1003
- certifi=2020.6.20=py36h9f0ad1d_0
- cffi=1.14.1=py36h0ff685e_0
- chardet=3.0.4=py36h9f0ad1d_1006
- configargparse=1.2.3=pyh9f0ad1d_0
- cryptography=3.0=py36h45558ae_0
- curl=7.65.2=hbc83047_0
- datrie=0.8.2=py36h8c4c3a4_0
- decorator=4.4.2=py_0
- docutils=0.15.2=py36_0
- dropbox=10.1.1=pyh9f0ad1d_0
- expat=2.2.9=he1b5a44_2
- filechunkio=1.6=py36_0
- fontconfig=2.13.1=h86ecdb6_1001
- freetype=2.10.2=he06d7ca_0
- ftputil=3.2=py36_0
- gettext=0.19.8.1=hc5be6a0_1002
- gitdb=4.0.5=py_0
- gitpython=3.1.3=py_0
- glib=2.65.0=h6f030ca_0
- google-api-core=1.22.0=py36h9f0ad1d_1
- google-auth=1.19.2=py_0
- google-cloud-core=1.3.0=py_0
- google-cloud-storage=1.28.1=pyh9f0ad1d_0
- google-resumable-media=0.5.1=pyh9f0ad1d_0
- googleapis-common-protos=1.51.0=py36h9f0ad1d_2
- graphite2=1.3.13=he1b5a44_1001
- graphviz=2.38.0=hf68f40c_1011
- harfbuzz=2.4.0=h9f30f68_3
- htslib=1.9=ha228f0b_7
- icu=64.2=he1b5a44_1
- idna=2.10=pyh9f0ad1d_0
- idna_ssl=1.1.0=py36_1000
- importlib-metadata=1.7.0=py36h9f0ad1d_0
- importlib_metadata=1.7.0=0
- intel-openmp=2019.4=243
- jinja2=2.11.2=pyh9f0ad1d_0
- jmespath=0.10.0=pyh9f0ad1d_0
- jpeg=9d=h516909a_0
- jsonschema=3.2.0=py36h9f0ad1d_1
- k8=0.2.5=he513fc3_0
- krb5=1.16.1=h173b8e3_7
- libcurl=7.65.2=h20c2e04_0
- libdeflate=1.0=h14c3975_1
- libedit=3.1.20181209=hc058e9b_0
- libffi=3.2.1=hd88cf55_4
- libgcc-ng=9.1.0=hdf63c60_0
- libgfortran-ng=7.3.0=hdf63c60_0
- libiconv=1.15=h516909a_1006
- libpng=1.6.37=hed695b0_1
- libprotobuf=3.12.3=h8b12597_2
- libssh2=1.8.2=h1ba5d50_0
- libstdcxx-ng=9.1.0=hdf63c60_0
- libtiff=4.0.10=h9022e91_1002
- libtool=2.4.6=h14c3975_1002
- libuuid=2.32.1=h14c3975_1000
- libxcb=1.13=h14c3975_1002
- libxml2=2.9.10=hee79883_0
- mappy=2.17=py36h84994c4_0
- markupsafe=1.1.1=py36h8c4c3a4_1
- minimap2=2.17=hed695b0_3
- mkl=2019.4=243
- mkl_fft=1.0.12=py36ha843d7b_0
- mkl_random=1.0.2=py36hd81dba3_0
- multidict=4.7.5=py36h8c4c3a4_1
- ncurses=6.1=he6710b0_1
- networkx=2.4=py_1
- numpy=1.16.4=py36h7e9f1db_0
- numpy-base=1.16.4=py36hde5b4d6_0
- openssl=1.1.1g=h516909a_0
- pandas=1.0.5=py36h830a2c2_0
- pango=1.40.14=he7ab937_1005
- paramiko=2.7.1=pyh9f0ad1d_1
- pcre=8.44=he1b5a44_0
- pip=19.1.1=py36_0
- pixman=0.38.0=h516909a_1003
- prettytable=0.7.2=py_3
- protobuf=3.12.3=py36h831f99a_0
- psutil=5.7.2=py36h8c4c3a4_0
- pthread-stubs=0.4=h14c3975_1001
- pyasn1=0.4.8=py_0
- pyasn1-modules=0.2.7=py_0
- pycparser=2.20=pyh9f0ad1d_2
- pygraphviz=1.3.1=py36_0
- pynacl=1.3.0=py36h516909a_1001
- pyopenssl=19.1.0=py_1
- pyrsistent=0.16.0=py36h8c4c3a4_0
- pysam=0.15.3=py36h5ad169c_0
- pysftp=0.2.9=py36_0
- pysocks=1.7.1=py36h9f0ad1d_1
- python=3.6.9=h265db76_0
- python-dateutil=2.8.1=py_0
- python-irodsclient=0.8.2=py_0
- python_abi=3.6=1_cp36m
- pytz=2020.1=pyh9f0ad1d_0
- pyyaml=5.3.1=py36h8c4c3a4_0
- r-data.table=1.13.0=r36h0eb13af_0
- r-dplyr=1.0.2=r36h0357c0b_0
- r-plyr=1.8.6=r36h0357c0b_1
- ratelimiter=1.2.0=py36h9f0ad1d_1001
- readline=7.0=h7b6447c_5
- requests=2.24.0=pyh9f0ad1d_0
- rocksdb=5.3.6=0
- rsa=3.1.4=py36_0
- s3transfer=0.3.3=py36h9f0ad1d_1
- samtools=1.9=h8571acd_11
- setuptools=41.0.1=py36_0
- smmap=3.0.4=pyh9f0ad1d_0
- snakemake=5.3.0=py36_1
- snakemake-minimal=5.3.0=py36_1
- snappy=1.1.7=h343f3c5_0
- sqlite=3.29.0=h7b6447c_0
- tk=8.6.8=hbc83047_0
- tqdm=4.32.1=py_0
- typing_extensions=3.7.4.2=py_0
- urllib3=1.25.10=py_0
- wheel=0.33.4=py36_0
- wrapt=1.12.1=py36h8c4c3a4_1
- xmlrunner=1.7.7=py_0
- xorg-kbproto=1.0.7=h14c3975_1002
- xorg-libice=1.0.10=h516909a_0
- xorg-libsm=1.2.3=h84519dc_1000
- xorg-libx11=1.6.9=h516909a_0
- xorg-libxau=1.0.9=h14c3975_0
- xorg-libxdmcp=1.1.3=h516909a_0
- xorg-libxext=1.3.4=h516909a_0
- xorg-libxpm=3.5.13=h516909a_0
- xorg-libxrender=0.9.10=h516909a_1002
- xorg-libxt=1.1.5=h516909a_1003
- xorg-renderproto=0.11.1=h14c3975_1002
- xorg-xextproto=7.3.0=h14c3975_1002
- xorg-xproto=7.0.31=h14c3975_1007
- xz=5.2.4=h14c3975_4
- yaml=0.2.5=h516909a_0
- yarl=1.4.2=py36h516909a_0
- zipp=3.1.0=py_0
- zlib=1.2.11=h7b6447c_3
- zstd=1.3.3=1
- pip:
- cython
- h5py==2.10.0
- ont-fast5-api==2.0.0
- progressbar33==2.4
- python-rocksdb==0.6.7
- six==1.13.0