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Workflow is packed with command below:
$ cwltool --pack cmsearch-multimodel-wf.cwl > cmsearch-multimodel-wf-packed.cwl
When importing the packed workflow in Galaxy, exception below occurs:
Traceback (most recent call last): File "lib/galaxy/web/framework/decorators.py", line 283, in decorator rval = func(self, trans, *args, **kwargs) File "lib/galaxy/webapps/galaxy/api/workflows.py", line 337, in create return self.__api_import_from_archive(trans, archive_data, source="uploaded file", from_path=os.path.abspath(uploaded_file_name)) File "lib/galaxy/webapps/galaxy/api/workflows.py", line 596, in __api_import_from_archive raw_workflow_description = self.__normalize_workflow(trans, data) File "lib/galaxy/webapps/galaxy/api/workflows.py", line 679, in __normalize_workflow return self.workflow_contents_manager.normalize_workflow_format(trans, as_dict) File "lib/galaxy/managers/workflows.py", line 315, in normalize_workflow_format workflow_path += "#" + object_id TypeError: unsupported operand type(s) for +=: 'NoneType' and 'str'
Adding 'src' and 'path' attributes in 'data' dict prevents the exception.
e6a4d11 (galaxy fork)
The text was updated successfully, but these errors were encountered:
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Workflow is packed with command below:
When importing the packed workflow in Galaxy, exception below occurs:
Adding 'src' and 'path' attributes in 'data' dict prevents the exception.
e6a4d11
(galaxy fork)
The text was updated successfully, but these errors were encountered: