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post_meta.yaml
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2018-04-19-cartopy-maps:
excerpt: Cartopy improves plots on maps
title: Improving map plots with Cartopy
tags:
- python
- plotting
2018-04-19-plotting-basics:
excerpt: Let's look at some basic plotting with Python
title: Plotting Basics
tags:
- python
- plotting
2018-04-24-reading-envi-met:
excerpt: null
title: Reading ENVI_MET files
tags:
- python
- xarray
2018-04-27-subplots:
excerpt: An advanced plot with multiple subplots and colour bars
title: Subplots
tags:
- python
- plotting
2018-04-27-xarray-plot-types:
excerpt: A few of the basic plot types that Xarray offers
title: Xarray plot types
tags:
- python
- xarray
- plotting
2018-05-01-latlon-reference:
excerpt: I keep forgetting where continents are. Let's make a map to help with that
using Cartopy
title: Python Tuesday - Lat-Lon reference chart
tags:
- python
- plotting
2018-05-22-python-netcdf:
excerpt: null
title: NetCDF Python library overview
tags:
- python
- xarray
- netcdf
2018-08-02-Merge-arrays-with-missing-data:
excerpt: How to merge two datasets of the same quantity together with proper handling
of missing data.
title: Merge arrays with missing data
tags:
- python
- xarray
2018-08-10-Fortran-Debugging-Videos:
excerpt: Presentation of Fortran Debugging Video Series
title: Fortran Debugging Video Series
tags:
- fortran
- debug
- video
2018-08-16-search-cmip5-data-interactively:
excerpt: How to use the ARCCSSive module to search and access CMIP5 data interactively
in your python code.
title: How to search CMIP5 data interactively
tags:
- python
- cmip
- data
2018-08-21-visualisation-in-shiny-app:
excerpt: How to use the R Shiny package to create cool visualisation apps
title: Visualisation in a Shiny App
tags:
- r
- plotting
2018-09-14-dask-era-interim:
excerpt: Using the power of Dask to start working with lots of files quickly
title: Speeding up large dataset loads with Dask
tags:
- python
- xarray
- dask
2018-09-28-line-plots-with-xarray:
excerpt: Demonstrating how to quickly plot timeseries and vertical profiles with
Xarray.
title: Line plots with Xarray
tags:
- python
- xarray
- plotting
2018-10-05-introduction-to-python-logging:
excerpt: Basic introduction of python logging module to add debug statements to
your code.
title: Introduction to python logging
tags:
- python
2018-10-12-create-netcdf:
excerpt: Quick guide on creating NetCDF files with Fortran and Python (xarray)
title: Creating NetCDF Files
tags:
- fortran
- python
- netcdf
2018-10-19-mppnccombine-fast:
excerpt: Introducing payu support for a new program for fast collation of tiled
MOM outputs (or any other FMS based model)
title: Fast MOM collation with payu and mppnncombine-fast
tags:
- payu
- data
2018-10-26-Setting-up-NetCDF-file-attributes:
excerpt: How to set up NetCDF global and variable attributes according to CF conventions
title: Setting up NetCDF file attributes
tags:
- netcdf
- data
2018-11-27-Value-when-other-is-max:
excerpt: Investigate how to find the values of variable B at the times variable
A is maximum.
title: Using a variable to mask another variable
tags:
- python
- xarray
2019-01-18-using-opendap:
excerpt: A short introduction to opendap and an example of how to use xarray and
opendap to access a remote dataset.
title: How to use opendap to access remote files.
tags:
- data
- python
- xarray
2019-03-01-coupling-resolution:
excerpt: null
title: Changing resolution in the ACCESS coupled model
tags:
- regridding
- model
2019-03-06-generating-print-quality-plots:
excerpt: null
title: Generating print-quality plots in R
tags:
- r
- plotting
2019-04-02-filter-file-lists-with-sed:
excerpt: null
title: Filter Lists of Files in bash Using sed
tags:
- bash
2019-07-29-multi-apply-along-axis:
excerpt: Use a trick with Numpy's apply_along_axis() to process multiple arrays
title: Time correlation at each gridpoint of multiple datasets
tags:
- python
- xarray
2019-09-03-python-animation:
excerpt: Quick guide on creating animated gifs and mp4 videos of datasets
title: Animating fields with Python
tags:
- python
- plotting
2019-11-12-Calendars-and-monthly-data:
excerpt: To compare timeseries on different calendars, you first need to get all
data on the same calendar. This blog shows a method in a simple case of monthly
data.
title: Aligning dates for monthly data on different calendars
tags:
- python
- xarray
2020-09-22-wrapping-pcolormesh:
excerpt: How to avoid blank gaps at the meridian and poles
tags:
- python
- plotting
title: Wrapping pyplot.pcolormesh around the globe
2020-09-23-split-yaxis:
excerpt: Making a plot where the top and bottom half have different axis ranges
tags:
- python
- plotting
title: Plots with a split y axis
2020-09-28-climate-finder-introduction:
excerpt: 'Using CleF command line to query CMIP5 and CMIP6 data at NCI '
tags:
- data
- cmip
title: CleF - Climate Finder basic commands
2020-09-28-eventdetection:
excerpt: Calculating basic statistics on events
tags:
- python
- events
title: Basic event detection
2020-10-12-climate-finder-extended-command-line:
excerpt: Advanced usage of CleF command line options to query CMIP5 and CMIP6 data
at NCI
tags:
- data
- cmip
title: CleF - Climate Finder advanced command line options
2021-04-09-xesmf-regrid:
excerpt: Use xesmf.Regridder to interpolate data efficiently
tags:
- python
- regridding
title: Efficient Regridding with xesmf
2021-07-29-coarsen_climatology:
excerpt: A reasonably recent addition to Xarray is the 'coarsen' function, which
allows you to resample a DataArray at a regular frequency. For well-behaved datasets
this provides some interesting opportunities for optimisation, getting around
the inefficiencies of 'groupby' from needing to work with arbitrary time spacings.
tags:
- xarray
- climatology
title: Climatologies with 'coarsen'
2021-10-01-pyproj:
tags: [pyproj, xarray]
2021-11-02-pyproj-regrid:
tags: [pyproj, xarray, regridding]
2021-11-24-api:
tags: [xarray, dask]
2022-03-15-reading-nonstandard-data:
tags: [xarray, pandas, paleoclimate]
2022-04-26-storage-where-what-why-how:
excerpt: Where is my stuff? What even is it? Why is it taking up so much space and
how can I fix it?
title: Storage - where, what, why and how?
tags: [data, netcdf, storage]
2022-11-10-jobfs:
title: How and when to use PBS Jobfs on NCI HPC systems
tags: [data, netcdf, storage]
2022-10-26-Date-Quarantine:
excerpt: How to prevent your data from going into quarantine and how to retrive it if it does.
title: Data quarantine and expiry.
tags: [data, storage]
2022-12-05-building-on-gadi:
title: Using Gadi's software environment to build your applications
tags: [fortran, python]
2023-01-27-using-symlink-home:
title: How to stop temporary files filling up your `/home` directory on Gadi
tags: [storage, disk]
2023-02-27-introducing-new-conda:
title: Introducing the new hh5 conda environment
tags: [ python ]
2023-03-30-file-expiry-shortcut:
title: Quick tip - Feed `nci-file-expiry` output back into itself
tags: [ storage, disk ]
2023-05-31-vscode-are:
title: Working with ARE notebooks in VS Code
tags: [ vscode, python, jupyter ]
2023-05-31-adding-new-task-to-cylc:
title: Adding a new task to a rose/cylc suite
excerpt: Describes the steps required to add an additional task to the ACCESS-CM2 model, using annualy changing Sea Surface Temperatures as an example.
tags: [ um, access ]
2023-06-22-mfdataset-preprocess:
title: More efficent use of xarray.open_mfdataset()
tags: [ python, xarray, dask, netcdf, data ]
2023-07-05-select-region-shapefile:
title: Using a shapefile to select a region and calculate statistics
tags: [ python, xarray, dask, raster, shapefile ]
2023-09-20-dask-optimiser:
title: Introducing `dask-optimiser`
tags: [ xarray, dask, python, jupyter ]
2023-11-02-gnu-parallel:
title: Using GNU Parallel in bash scripts to optimize python processes
tags: [ python, bash ]
2023-11-04-seasonal-means:
title: Getting seasonal means out of a dataset
tags:
- python
- xarray
2023-12-12-apply-ufunc:
title: Speed up custom operations with universal functions.
tags:
- python
- xarray
- dask
tags: [python, xarray]
2024-05-02-comparison-of-performance:
title: Python Performance Options
author: Holger Wolff
excerpt: Investigates how the performance of python code can be enhanced without parallelisation.
tags: [ python ]
2024-05-20-pytorch_intro:
title: Introduction to Pytorch
tags: [ python ML ]
2024-06-05-mixing-python-envs:
title: Building custom python environments on top of conda/analysis3
tags: [ python ]