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version_edit.go
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// Copyright 2012 The LevelDB-Go and Pebble Authors. All rights reserved. Use
// of this source code is governed by a BSD-style license that can be found in
// the LICENSE file.
package manifest
import (
"bufio"
"bytes"
"encoding/binary"
"io"
"sync/atomic"
"github.com/cockroachdb/errors"
"github.com/cockroachdb/pebble/internal/base"
)
// TODO(peter): describe the MANIFEST file format, independently of the C++
// project.
var errCorruptManifest = base.CorruptionErrorf("pebble: corrupt manifest")
type byteReader interface {
io.ByteReader
io.Reader
}
// Tags for the versionEdit disk format.
// Tag 8 is no longer used.
const (
// LevelDB tags.
tagComparator = 1
tagLogNumber = 2
tagNextFileNumber = 3
tagLastSequence = 4
tagCompactPointer = 5
tagDeletedFile = 6
tagNewFile = 7
tagPrevLogNumber = 9
// RocksDB tags.
tagNewFile2 = 100
tagNewFile3 = 102
tagNewFile4 = 103
tagColumnFamily = 200
tagColumnFamilyAdd = 201
tagColumnFamilyDrop = 202
tagMaxColumnFamily = 203
// The custom tags sub-format used by tagNewFile4.
customTagTerminate = 1
customTagNeedsCompaction = 2
customTagCreationTime = 6
customTagPathID = 65
customTagNonSafeIgnoreMask = 1 << 6
// Pebble tags.
tagNewFile4RangeKeys = 300
)
// DeletedFileEntry holds the state for a file deletion from a level. The file
// itself might still be referenced by another level.
type DeletedFileEntry struct {
Level int
FileNum base.FileNum
}
// NewFileEntry holds the state for a new file or one moved from a different
// level.
type NewFileEntry struct {
Level int
Meta *FileMetadata
}
// VersionEdit holds the state for an edit to a Version along with other
// on-disk state (log numbers, next file number, and the last sequence number).
type VersionEdit struct {
// ComparerName is the value of Options.Comparer.Name. This is only set in
// the first VersionEdit in a manifest (either when the DB is created, or
// when a new manifest is created) and is used to verify that the comparer
// specified at Open matches the comparer that was previously used.
ComparerName string
// MinUnflushedLogNum is the smallest WAL log file number corresponding to
// mutations that have not been flushed to an sstable.
//
// This is an optional field, and 0 represents it is not set.
MinUnflushedLogNum base.FileNum
// ObsoletePrevLogNum is a historic artifact from LevelDB that is not used by
// Pebble, RocksDB, or even LevelDB. Its use in LevelDB was deprecated in
// 6/2011. We keep it around purely for informational purposes when
// displaying MANIFEST contents.
ObsoletePrevLogNum uint64
// The next file number. A single counter is used to assign file numbers
// for the WAL, MANIFEST, sstable, and OPTIONS files.
NextFileNum base.FileNum
// LastSeqNum is an upper bound on the sequence numbers that have been
// assigned in flushed WALs. Unflushed WALs (that will be replayed during
// recovery) may contain sequence numbers greater than this value.
LastSeqNum uint64
// A file num may be present in both deleted files and new files when it
// is moved from a lower level to a higher level (when the compaction
// found that there was no overlapping file at the higher level).
DeletedFiles map[DeletedFileEntry]*FileMetadata
NewFiles []NewFileEntry
}
// Decode decodes an edit from the specified reader.
func (v *VersionEdit) Decode(r io.Reader) error {
br, ok := r.(byteReader)
if !ok {
br = bufio.NewReader(r)
}
d := versionEditDecoder{br}
for {
tag, err := binary.ReadUvarint(br)
if err == io.EOF {
break
}
if err != nil {
return err
}
switch tag {
case tagComparator:
s, err := d.readBytes()
if err != nil {
return err
}
v.ComparerName = string(s)
case tagLogNumber:
n, err := d.readFileNum()
if err != nil {
return err
}
v.MinUnflushedLogNum = n
case tagNextFileNumber:
n, err := d.readFileNum()
if err != nil {
return err
}
v.NextFileNum = n
case tagLastSequence:
n, err := d.readUvarint()
if err != nil {
return err
}
v.LastSeqNum = n
case tagCompactPointer:
if _, err := d.readLevel(); err != nil {
return err
}
if _, err := d.readBytes(); err != nil {
return err
}
// NB: RocksDB does not use compaction pointers anymore.
case tagDeletedFile:
level, err := d.readLevel()
if err != nil {
return err
}
fileNum, err := d.readFileNum()
if err != nil {
return err
}
if v.DeletedFiles == nil {
v.DeletedFiles = make(map[DeletedFileEntry]*FileMetadata)
}
v.DeletedFiles[DeletedFileEntry{level, fileNum}] = nil
case tagNewFile, tagNewFile2, tagNewFile3, tagNewFile4, tagNewFile4RangeKeys:
level, err := d.readLevel()
if err != nil {
return err
}
fileNum, err := d.readFileNum()
if err != nil {
return err
}
if tag == tagNewFile3 {
// The pathID field appears unused in RocksDB.
_ /* pathID */, err := d.readUvarint()
if err != nil {
return err
}
}
size, err := d.readUvarint()
if err != nil {
return err
}
// We read the smallest / largest key bounds differently depending on
// whether we have point, range or both types of keys present in the
// table.
var (
smallestPointKey, largestPointKey []byte
smallestRangeKey, largestRangeKey []byte
parsedPointBounds bool
boundsMarker byte
)
if tag != tagNewFile4RangeKeys {
// Range keys not present in the table. Parse the point key bounds.
smallestPointKey, err = d.readBytes()
if err != nil {
return err
}
largestPointKey, err = d.readBytes()
if err != nil {
return err
}
} else {
// Range keys are present in the table. Determine whether we have point
// keys to parse, in addition to the bounds.
boundsMarker, err = d.ReadByte()
if err != nil {
return err
}
// Parse point key bounds, if present.
if boundsMarker&maskContainsPointKeys > 0 {
smallestPointKey, err = d.readBytes()
if err != nil {
return err
}
largestPointKey, err = d.readBytes()
if err != nil {
return err
}
parsedPointBounds = true
} else {
// The table does not have point keys.
// Sanity check: the bounds must be range keys.
if boundsMarker&maskSmallest != 0 || boundsMarker&maskLargest != 0 {
return base.CorruptionErrorf(
"new-file-4-range-keys: table without point keys has point key bounds: marker=%x",
boundsMarker,
)
}
}
// Parse range key bounds.
smallestRangeKey, err = d.readBytes()
if err != nil {
return err
}
largestRangeKey, err = d.readBytes()
if err != nil {
return err
}
}
var smallestSeqNum uint64
var largestSeqNum uint64
if tag != tagNewFile {
smallestSeqNum, err = d.readUvarint()
if err != nil {
return err
}
largestSeqNum, err = d.readUvarint()
if err != nil {
return err
}
}
var markedForCompaction bool
var creationTime uint64
if tag == tagNewFile4 || tag == tagNewFile4RangeKeys {
for {
customTag, err := d.readUvarint()
if err != nil {
return err
}
if customTag == customTagTerminate {
break
}
field, err := d.readBytes()
if err != nil {
return err
}
switch customTag {
case customTagNeedsCompaction:
if len(field) != 1 {
return base.CorruptionErrorf("new-file4: need-compaction field wrong size")
}
markedForCompaction = (field[0] == 1)
case customTagCreationTime:
var n int
creationTime, n = binary.Uvarint(field)
if n != len(field) {
return base.CorruptionErrorf("new-file4: invalid file creation time")
}
case customTagPathID:
return base.CorruptionErrorf("new-file4: path-id field not supported")
default:
if (customTag & customTagNonSafeIgnoreMask) != 0 {
return base.CorruptionErrorf("new-file4: custom field not supported: %d", customTag)
}
}
}
}
m := &FileMetadata{
FileNum: fileNum,
Size: size,
CreationTime: int64(creationTime),
SmallestSeqNum: smallestSeqNum,
LargestSeqNum: largestSeqNum,
MarkedForCompaction: markedForCompaction,
}
if tag != tagNewFile4RangeKeys { // no range keys present
m.SmallestPointKey = base.DecodeInternalKey(smallestPointKey)
m.LargestPointKey = base.DecodeInternalKey(largestPointKey)
m.HasPointKeys = true
m.Smallest, m.Largest = m.SmallestPointKey, m.LargestPointKey
m.boundTypeSmallest, m.boundTypeLargest = boundTypePointKey, boundTypePointKey
} else { // range keys present
// Set point key bounds, if parsed.
if parsedPointBounds {
m.SmallestPointKey = base.DecodeInternalKey(smallestPointKey)
m.LargestPointKey = base.DecodeInternalKey(largestPointKey)
m.HasPointKeys = true
}
// Set range key bounds.
m.SmallestRangeKey = base.DecodeInternalKey(smallestRangeKey)
m.LargestRangeKey = base.DecodeInternalKey(largestRangeKey)
m.HasRangeKeys = true
// Set overall bounds (by default assume range keys).
m.Smallest, m.Largest = m.SmallestRangeKey, m.LargestRangeKey
m.boundTypeSmallest, m.boundTypeLargest = boundTypeRangeKey, boundTypeRangeKey
if boundsMarker&maskSmallest == maskSmallest {
m.Smallest = m.SmallestPointKey
m.boundTypeSmallest = boundTypePointKey
}
if boundsMarker&maskLargest == maskLargest {
m.Largest = m.LargestPointKey
m.boundTypeLargest = boundTypePointKey
}
}
m.boundsSet = true
v.NewFiles = append(v.NewFiles, NewFileEntry{
Level: level,
Meta: m,
})
case tagPrevLogNumber:
n, err := d.readUvarint()
if err != nil {
return err
}
v.ObsoletePrevLogNum = n
case tagColumnFamily, tagColumnFamilyAdd, tagColumnFamilyDrop, tagMaxColumnFamily:
return base.CorruptionErrorf("column families are not supported")
default:
return errCorruptManifest
}
}
return nil
}
// Encode encodes an edit to the specified writer.
func (v *VersionEdit) Encode(w io.Writer) error {
e := versionEditEncoder{new(bytes.Buffer)}
if v.ComparerName != "" {
e.writeUvarint(tagComparator)
e.writeString(v.ComparerName)
}
if v.MinUnflushedLogNum != 0 {
e.writeUvarint(tagLogNumber)
e.writeUvarint(uint64(v.MinUnflushedLogNum))
}
if v.ObsoletePrevLogNum != 0 {
e.writeUvarint(tagPrevLogNumber)
e.writeUvarint(v.ObsoletePrevLogNum)
}
if v.NextFileNum != 0 {
e.writeUvarint(tagNextFileNumber)
e.writeUvarint(uint64(v.NextFileNum))
}
// RocksDB requires LastSeqNum to be encoded for the first MANIFEST entry,
// even though its value is zero. We detect this by encoding LastSeqNum when
// ComparerName is set.
if v.LastSeqNum != 0 || v.ComparerName != "" {
e.writeUvarint(tagLastSequence)
e.writeUvarint(v.LastSeqNum)
}
for x := range v.DeletedFiles {
e.writeUvarint(tagDeletedFile)
e.writeUvarint(uint64(x.Level))
e.writeUvarint(uint64(x.FileNum))
}
for _, x := range v.NewFiles {
customFields := x.Meta.MarkedForCompaction || x.Meta.CreationTime != 0
var tag uint64
switch {
case x.Meta.HasRangeKeys:
tag = tagNewFile4RangeKeys
case customFields:
tag = tagNewFile4
default:
tag = tagNewFile2
}
e.writeUvarint(tag)
e.writeUvarint(uint64(x.Level))
e.writeUvarint(uint64(x.Meta.FileNum))
e.writeUvarint(x.Meta.Size)
if !x.Meta.HasRangeKeys {
// If we have no range keys, preserve the original format and write the
// smallest and largest point keys.
e.writeKey(x.Meta.SmallestPointKey)
e.writeKey(x.Meta.LargestPointKey)
} else {
// When range keys are present, we first write a marker byte that
// indicates if the table also contains point keys, in addition to how the
// overall bounds for the table should be reconstructed. This byte is
// followed by the keys themselves.
b, err := x.Meta.boundsMarker()
if err != nil {
return err
}
if err = e.WriteByte(b); err != nil {
return err
}
// Write point key bounds (if present).
if x.Meta.HasPointKeys {
e.writeKey(x.Meta.SmallestPointKey)
e.writeKey(x.Meta.LargestPointKey)
}
// Write range key bounds.
e.writeKey(x.Meta.SmallestRangeKey)
e.writeKey(x.Meta.LargestRangeKey)
}
e.writeUvarint(x.Meta.SmallestSeqNum)
e.writeUvarint(x.Meta.LargestSeqNum)
if customFields {
if x.Meta.CreationTime != 0 {
e.writeUvarint(customTagCreationTime)
var buf [binary.MaxVarintLen64]byte
n := binary.PutUvarint(buf[:], uint64(x.Meta.CreationTime))
e.writeBytes(buf[:n])
}
if x.Meta.MarkedForCompaction {
e.writeUvarint(customTagNeedsCompaction)
e.writeBytes([]byte{1})
}
e.writeUvarint(customTagTerminate)
}
}
_, err := w.Write(e.Bytes())
return err
}
type versionEditDecoder struct {
byteReader
}
func (d versionEditDecoder) readBytes() ([]byte, error) {
n, err := d.readUvarint()
if err != nil {
return nil, err
}
s := make([]byte, n)
_, err = io.ReadFull(d, s)
if err != nil {
if err == io.ErrUnexpectedEOF {
return nil, errCorruptManifest
}
return nil, err
}
return s, nil
}
func (d versionEditDecoder) readLevel() (int, error) {
u, err := d.readUvarint()
if err != nil {
return 0, err
}
if u >= NumLevels {
return 0, errCorruptManifest
}
return int(u), nil
}
func (d versionEditDecoder) readFileNum() (base.FileNum, error) {
u, err := d.readUvarint()
if err != nil {
return 0, err
}
return base.FileNum(u), nil
}
func (d versionEditDecoder) readUvarint() (uint64, error) {
u, err := binary.ReadUvarint(d)
if err != nil {
if err == io.EOF {
return 0, errCorruptManifest
}
return 0, err
}
return u, nil
}
type versionEditEncoder struct {
*bytes.Buffer
}
func (e versionEditEncoder) writeBytes(p []byte) {
e.writeUvarint(uint64(len(p)))
e.Write(p)
}
func (e versionEditEncoder) writeKey(k InternalKey) {
e.writeUvarint(uint64(k.Size()))
e.Write(k.UserKey)
buf := k.EncodeTrailer()
e.Write(buf[:])
}
func (e versionEditEncoder) writeString(s string) {
e.writeUvarint(uint64(len(s)))
e.WriteString(s)
}
func (e versionEditEncoder) writeUvarint(u uint64) {
var buf [binary.MaxVarintLen64]byte
n := binary.PutUvarint(buf[:], u)
e.Write(buf[:n])
}
// BulkVersionEdit summarizes the files added and deleted from a set of version
// edits.
type BulkVersionEdit struct {
Added [NumLevels][]*FileMetadata
Deleted [NumLevels]map[base.FileNum]*FileMetadata
// AddedByFileNum maps file number to file metadata for all added files
// from accumulated version edits. AddedByFileNum is only populated if set
// to non-nil by a caller. It must be set to non-nil when replaying
// version edits read from a MANIFEST (as opposed to VersionEdits
// constructed in-memory). While replaying a MANIFEST file,
// VersionEdit.DeletedFiles map entries have nil values, because the
// on-disk deletion record encodes only the file number. Accumulate
// uses AddedByFileNum to correctly populate the BulkVersionEdit's Deleted
// field with non-nil *FileMetadata.
AddedByFileNum map[base.FileNum]*FileMetadata
// MarkedForCompactionCountDiff holds the aggregated count of files
// marked for compaction added or removed.
MarkedForCompactionCountDiff int
}
// Accumulate adds the file addition and deletions in the specified version
// edit to the bulk edit's internal state.
func (b *BulkVersionEdit) Accumulate(ve *VersionEdit) error {
for df, m := range ve.DeletedFiles {
dmap := b.Deleted[df.Level]
if dmap == nil {
dmap = make(map[base.FileNum]*FileMetadata)
b.Deleted[df.Level] = dmap
}
if m == nil {
// m is nil only when replaying a MANIFEST.
if b.AddedByFileNum == nil {
return errors.Errorf("deleted file L%d.%s's metadata is absent and bve.AddedByFileNum is nil", df.Level, df.FileNum)
}
m = b.AddedByFileNum[df.FileNum]
if m == nil {
return base.CorruptionErrorf("pebble: file deleted L%d.%s before it was inserted", df.Level, df.FileNum)
}
}
if m.MarkedForCompaction {
b.MarkedForCompactionCountDiff--
}
dmap[df.FileNum] = m
}
for _, nf := range ve.NewFiles {
// A new file should not have been deleted in this or a preceding
// VersionEdit at the same level (though files can move across levels).
if dmap := b.Deleted[nf.Level]; dmap != nil {
if _, ok := dmap[nf.Meta.FileNum]; ok {
return base.CorruptionErrorf("pebble: file deleted L%d.%s before it was inserted", nf.Level, nf.Meta.FileNum)
}
}
b.Added[nf.Level] = append(b.Added[nf.Level], nf.Meta)
if b.AddedByFileNum != nil {
b.AddedByFileNum[nf.Meta.FileNum] = nf.Meta
}
if nf.Meta.MarkedForCompaction {
b.MarkedForCompactionCountDiff++
}
}
return nil
}
// Apply applies the delta b to the current version to produce a new
// version. The new version is consistent with respect to the comparer cmp.
//
// curr may be nil, which is equivalent to a pointer to a zero version.
//
// On success, a map of zombie files containing the file numbers and sizes of
// deleted files is returned. These files are considered zombies because they
// are no longer referenced by the returned Version, but cannot be deleted from
// disk as they are still in use by the incoming Version.
func (b *BulkVersionEdit) Apply(
curr *Version,
cmp Compare,
formatKey base.FormatKey,
flushSplitBytes int64,
readCompactionRate int64,
) (_ *Version, zombies map[base.FileNum]uint64, _ error) {
addZombie := func(fileNum base.FileNum, size uint64) {
if zombies == nil {
zombies = make(map[base.FileNum]uint64)
}
zombies[fileNum] = size
}
// The remove zombie function is used to handle tables that are moved from
// one level to another during a version edit (i.e. a "move" compaction).
removeZombie := func(fileNum base.FileNum) {
if zombies != nil {
delete(zombies, fileNum)
}
}
v := new(Version)
// Adjust the count of files marked for compaction.
if curr != nil {
v.Stats.MarkedForCompaction = curr.Stats.MarkedForCompaction
}
v.Stats.MarkedForCompaction += b.MarkedForCompactionCountDiff
if v.Stats.MarkedForCompaction < 0 {
return nil, nil, base.CorruptionErrorf("pebble: version marked for compaction count negative")
}
for level := range v.Levels {
if curr == nil || curr.Levels[level].tree.root == nil {
v.Levels[level] = makeLevelMetadata(cmp, level, nil /* files */)
} else {
v.Levels[level] = curr.Levels[level].clone()
}
if len(b.Added[level]) == 0 && len(b.Deleted[level]) == 0 {
// There are no edits on this level.
if level == 0 {
// Initialize L0Sublevels.
if curr == nil || curr.L0Sublevels == nil {
if err := v.InitL0Sublevels(cmp, formatKey, flushSplitBytes); err != nil {
return nil, nil, errors.Wrap(err, "pebble: internal error")
}
} else {
v.L0Sublevels = curr.L0Sublevels
v.L0SublevelFiles = v.L0Sublevels.Levels
}
}
continue
}
// Some edits on this level.
lm := &v.Levels[level]
addedFiles := b.Added[level]
deletedMap := b.Deleted[level]
if n := v.Levels[level].Len() + len(addedFiles); n == 0 {
return nil, nil, base.CorruptionErrorf(
"pebble: internal error: No current or added files but have deleted files: %d",
errors.Safe(len(deletedMap)))
}
// NB: addedFiles may be empty and it also is not necessarily
// internally consistent: it does not reflect deletions in deletedMap.
for _, f := range deletedMap {
addZombie(f.FileNum, f.Size)
if obsolete := v.Levels[level].tree.delete(f); obsolete {
// Deleting a file from the B-Tree may decrement its
// reference count. However, because we cloned the
// previous level's B-Tree, this should never result in a
// file's reference count dropping to zero.
err := errors.Errorf("pebble: internal error: file L%d.%s obsolete during B-Tree removal", level, f.FileNum)
return nil, nil, err
}
}
var sm, la *FileMetadata
for _, f := range addedFiles {
if _, ok := deletedMap[f.FileNum]; ok {
// Already called addZombie on this file in the preceding
// loop, so we don't need to do it here.
continue
}
// NB: allowedSeeks is used for read triggered compactions. It is set using
// Options.Experimental.ReadCompactionRate which defaults to 32KB.
var allowedSeeks int64
if readCompactionRate != 0 {
allowedSeeks = int64(f.Size) / readCompactionRate
}
if allowedSeeks < 100 {
allowedSeeks = 100
}
atomic.StoreInt64(&f.Atomic.AllowedSeeks, allowedSeeks)
f.InitAllowedSeeks = allowedSeeks
err := lm.tree.insert(f)
if err != nil {
return nil, nil, errors.Wrap(err, "pebble")
}
removeZombie(f.FileNum)
// Track the keys with the smallest and largest keys, so that we can
// check consistency of the modified span.
if sm == nil || base.InternalCompare(cmp, sm.Smallest, f.Smallest) > 0 {
sm = f
}
if la == nil || base.InternalCompare(cmp, la.Largest, f.Largest) < 0 {
la = f
}
}
if level == 0 {
if curr != nil && curr.L0Sublevels != nil && len(deletedMap) == 0 {
// Flushes and ingestions that do not delete any L0 files do not require
// a regeneration of L0Sublevels from scratch. We can instead generate
// it incrementally.
var err error
// AddL0Files requires addedFiles to be sorted in seqnum order.
addedFiles = append([]*FileMetadata(nil), addedFiles...)
SortBySeqNum(addedFiles)
v.L0Sublevels, err = curr.L0Sublevels.AddL0Files(addedFiles, flushSplitBytes, &v.Levels[0])
if errors.Is(err, errInvalidL0SublevelsOpt) {
err = v.InitL0Sublevels(cmp, formatKey, flushSplitBytes)
}
if err != nil {
return nil, nil, errors.Wrap(err, "pebble: internal error")
}
v.L0SublevelFiles = v.L0Sublevels.Levels
} else if err := v.InitL0Sublevels(cmp, formatKey, flushSplitBytes); err != nil {
return nil, nil, errors.Wrap(err, "pebble: internal error")
}
if err := CheckOrdering(cmp, formatKey, Level(0), v.Levels[level].Iter()); err != nil {
return nil, nil, errors.Wrap(err, "pebble: internal error")
}
continue
}
// Check consistency of the level in the vicinity of our edits.
if sm != nil && la != nil {
overlap := overlaps(v.Levels[level].Iter(), cmp, sm.Smallest.UserKey,
la.Largest.UserKey, la.Largest.IsExclusiveSentinel())
// overlap contains all of the added files. We want to ensure that
// the added files are consistent with neighboring existing files
// too, so reslice the overlap to pull in a neighbor on each side.
check := overlap.Reslice(func(start, end *LevelIterator) {
if m := start.Prev(); m == nil {
start.Next()
}
if m := end.Next(); m == nil {
end.Prev()
}
})
if err := CheckOrdering(cmp, formatKey, Level(level), check.Iter()); err != nil {
return nil, nil, errors.Wrap(err, "pebble: internal error")
}
}
}
return v, zombies, nil
}