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Issues list

HiFiasm --ont and ONT corrected reads
#742 opened Dec 13, 2024 by colindaven
4
Wanted to ask in relation to this issue and @chhylp123 's question, how should be generate the parental assemblies. Should it be trio-bin mode for the offspring and regular mode for parents?
#741 opened Dec 11, 2024 by jinhua2024
Genome assembly twice the expected size
#740 opened Dec 10, 2024 by vaillan6
1
About the hifiasm version choice
#739 opened Dec 6, 2024 by jiangxiuhan0310
2
Optimization of HiFiasm
#738 opened Dec 6, 2024 by DLCrawford
1
Linked-read data?
#737 opened Dec 5, 2024 by cjfields
Segfault from latest version
#735 opened Dec 4, 2024 by jetrz
8
Hifiasm-0.21.0-r686 about ONT assembly
#734 opened Dec 4, 2024 by dazhuang420
1
Distinguish for the Paternal and maternal haploids?
#733 opened Dec 4, 2024 by yuan102379
Trio binning for triploid
#732 opened Nov 30, 2024 by gunjanpandey
genome size larger than estimate genome size
#731 opened Nov 29, 2024 by yaradua
1
Hifiasm gets stucks
#730 opened Nov 28, 2024 by DrPaulFrank
which value for --s-base
#729 opened Nov 26, 2024 by AlcaArctica
Hap1 is smaller in size and has a low contig N50, while Hap2 is larger and has a higher contig N50.
#728 opened Nov 25, 2024 by afiyachida
3
Although I specified the value of hum-cov, the log shows that the peak_hom for subsequent analysis is not 26
#727 opened Nov 18, 2024 by Tolernabio
Hom_cov, Kmers, yeiled two haplodoid of different size and much duplication
#726 opened Nov 12, 2024 by DLCrawford
contig names with nhap > 2
#725 opened Nov 12, 2024 by chklopp
building two haplotypes even after specifying --n-hap 1
#724 opened Nov 12, 2024 by amara86
Genome typing using both parental short reads and Hic reads
#723 opened Nov 6, 2024 by heziqing
Problems with a duplicated region
#722 opened Nov 5, 2024 by LauraSkak
Illegal instruction (core dumped)
#721 opened Nov 4, 2024 by paulkim194
max length seems too long
#719 opened Nov 2, 2024 by Xoey0314
2
hifiasm using about gametophyte of fern
#718 opened Nov 2, 2024 by guoshanf
2
Hifiasm with Ultralong_ONT
#716 opened Oct 24, 2024 by handesome
1
Trio binning with long reads parents
#714 opened Oct 14, 2024 by jeffchen2000
1
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