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metagenomics-Ubuntu22.yml
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metagenomics-Ubuntu22.yml
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name: metagenomics
channels:
- bioconda
- conda-forge
- defaults
dependencies:
- _libgcc_mutex=0.1=conda_forge
- _openmp_mutex=4.5=2_gnu
- _r-mutex=1.0.1=anacondar_1
- _sysroot_linux-64_curr_repodata_hack=3=h5bd9786_13
- alsa-lib=1.2.7.2=h166bdaf_0
- binutils_impl_linux-64=2.36.1=h193b22a_2
- biom-format=2.1.12=py38h71d37f0_1
- blast=2.13.0=hf3cf87c_0
- bowtie2=2.2.5=py38h8c62d01_8
- brotli=1.0.9=h166bdaf_7
- brotli-bin=1.0.9=h166bdaf_7
- bwidget=1.9.14=ha770c72_1
- bzip2=1.0.8=h7f98852_4
- c-ares=1.18.1=h7f98852_0
- ca-certificates=2022.6.15.2=ha878542_0
- cached-property=1.5.2=hd8ed1ab_1
- cached_property=1.5.2=pyha770c72_1
- cairo=1.16.0=ha61ee94_1013
- certifi=2022.6.15.2=pyhd8ed1ab_0
- checkm-genome=1.2.1=pyhdfd78af_0
- click=8.1.3=py38h578d9bd_0
- curl=7.83.1=h7bff187_0
- cycler=0.11.0=pyhd8ed1ab_0
- dendropy=4.5.2=pyh3252c3a_0
- entrez-direct=16.2=he881be0_1
- expat=2.4.8=h27087fc_0
- fastqc=0.11.9=hdfd78af_1
- font-ttf-dejavu-sans-mono=2.37=hab24e00_0
- font-ttf-inconsolata=3.000=h77eed37_0
- font-ttf-source-code-pro=2.038=h77eed37_0
- font-ttf-ubuntu=0.83=hab24e00_0
- fontconfig=2.14.0=hc2a2eb6_1
- fonts-conda-ecosystem=1=0
- fonts-conda-forge=1=0
- fonttools=4.37.1=py38h0a891b7_0
- fraggenescan=1.31=hec16e2b_4
- freetype=2.12.1=hca18f0e_0
- fribidi=1.0.10=h36c2ea0_0
- future=0.18.2=py38h578d9bd_5
- gcc_impl_linux-64=12.1.0=hea43390_16
- gettext=0.19.8.1=h73d1719_1008
- gfortran_impl_linux-64=12.1.0=h1db8e46_16
- giflib=5.2.1=h36c2ea0_2
- graphite2=1.3.13=h58526e2_1001
- gsl=2.7=he838d99_0
- gxx_impl_linux-64=12.1.0=hea43390_16
- h5py=3.7.0=nompi_py38h045baee_101
- harfbuzz=5.1.0=hf9f4e7c_0
- hdf5=1.12.2=nompi_h2386368_100
- hmmer=3.3.2=h87f3376_2
- icu=70.1=h27087fc_0
- idba=1.1.3=1
- jpeg=9e=h166bdaf_2
- kernel-headers_linux-64=2.6.32=he073ed8_15
- keyutils=1.6.1=h166bdaf_0
- kiwisolver=1.4.4=py38h43d8883_0
- kraken-biom=1.2.0=pyh5e36f6f_0
- kraken2=2.1.2=pl5321h9f5acd7_2
- krb5=1.19.3=h3790be6_0
- krona=2.8.1=pl5321hdfd78af_1
- lcms2=2.12=hddcbb42_0
- ld_impl_linux-64=2.36.1=hea4e1c9_2
- lerc=3.0=h9c3ff4c_0
- libblas=3.9.0=16_linux64_openblas
- libbrotlicommon=1.0.9=h166bdaf_7
- libbrotlidec=1.0.9=h166bdaf_7
- libbrotlienc=1.0.9=h166bdaf_7
- libcblas=3.9.0=16_linux64_openblas
- libcups=2.3.3=h3e49a29_2
- libcurl=7.83.1=h7bff187_0
- libdeflate=1.10=h7f98852_0
- libedit=3.1.20191231=he28a2e2_2
- libev=4.33=h516909a_1
- libffi=3.4.2=h7f98852_5
- libgcc=7.2.0=h69d50b8_2
- libgcc-devel_linux-64=12.1.0=h1ec3361_16
- libgcc-ng=12.1.0=h8d9b700_16
- libgfortran-ng=12.1.0=h69a702a_16
- libgfortran5=12.1.0=hdcd56e2_16
- libglib=2.72.1=h2d90d5f_0
- libgomp=12.1.0=h8d9b700_16
- libiconv=1.16=h516909a_0
- libidn2=2.3.3=h166bdaf_0
- liblapack=3.9.0=16_linux64_openblas
- libnghttp2=1.47.0=hdcd2b5c_1
- libnsl=2.0.0=h7f98852_0
- libopenblas=0.3.21=pthreads_h78a6416_3
- libpng=1.6.37=h753d276_4
- libsanitizer=12.1.0=ha89aaad_16
- libsqlite=3.39.3=h753d276_0
- libssh2=1.10.0=haa6b8db_3
- libstdcxx-devel_linux-64=12.1.0=h1ec3361_16
- libstdcxx-ng=12.1.0=ha89aaad_16
- libtiff=4.4.0=h0fcbabc_0
- libunistring=0.9.10=h7f98852_0
- libuuid=2.32.1=h7f98852_1000
- libwebp-base=1.2.4=h166bdaf_0
- libxcb=1.13=h7f98852_1004
- libxml2=2.9.14=h22db469_4
- libzlib=1.2.12=h166bdaf_3
- llvm-openmp=8.0.1=hc9558a2_0
- lz4-c=1.9.3=h9c3ff4c_1
- make=4.3=hd18ef5c_1
- matplotlib-base=3.5.3=py38h38b5ce0_2
- maxbin2=2.2.7=he1b5a44_1
- munkres=1.1.4=pyh9f0ad1d_0
- ncurses=6.3=h27087fc_1
- numpy=1.23.3=py38h3a7f9d9_0
- openjdk=17.0.3=h85293d2_2
- openjpeg=2.5.0=h7d73246_1
- openmp=8.0.1=0
- openssl=1.1.1q=h166bdaf_0
- packaging=21.3=pyhd8ed1ab_0
- pandas=1.4.4=py38h47df419_0
- pango=1.50.9=hc4f8a73_0
- pcre=8.45=h9c3ff4c_0
- pcre2=10.37=hc3806b6_1
- perl=5.32.1=2_h7f98852_perl5
- perl-archive-tar=2.40=pl5321hdfd78af_0
- perl-base=2.23=pl5321hdfd78af_2
- perl-business-isbn=3.007=pl5321hdfd78af_0
- perl-business-isbn-data=20210112.006=pl5321hd8ed1ab_0
- perl-carp=1.50=pl5321hd8ed1ab_0
- perl-common-sense=3.75=pl5321hd8ed1ab_0
- perl-compress-raw-bzip2=2.201=pl5321h166bdaf_0
- perl-compress-raw-zlib=2.202=pl5321h166bdaf_0
- perl-constant=1.33=pl5321hd8ed1ab_0
- perl-data-dumper=2.183=pl5321h166bdaf_0
- perl-digest-hmac=1.04=pl5321hdfd78af_0
- perl-digest-md5=2.58=pl5321hec16e2b_1
- perl-encode=3.19=pl5321hec16e2b_1
- perl-encode-locale=1.05=pl5321hdfd78af_7
- perl-exporter=5.74=pl5321hd8ed1ab_0
- perl-exporter-tiny=1.002002=pl5321hd8ed1ab_0
- perl-extutils-makemaker=7.64=pl5321hd8ed1ab_0
- perl-file-listing=6.15=pl5321hdfd78af_0
- perl-file-spec=3.48_01=pl5321hdfd78af_2
- perl-html-parser=3.78=pl5321h9f5acd7_0
- perl-html-tagset=3.20=pl5321hdfd78af_4
- perl-http-cookies=6.10=pl5321hdfd78af_0
- perl-http-daemon=6.14=pl5321hdfd78af_0
- perl-http-date=6.05=pl5321hdfd78af_0
- perl-http-message=6.36=pl5321hdfd78af_0
- perl-http-negotiate=6.01=pl5321hdfd78af_4
- perl-io-compress=2.201=pl5321h87f3376_0
- perl-io-html=1.004=pl5321hdfd78af_0
- perl-io-socket-ssl=2.075=pl5321hd8ed1ab_0
- perl-io-zlib=1.11=pl5321hdfd78af_0
- perl-json=4.09=pl5321hdfd78af_0
- perl-json-xs=2.34=pl5321h9f5acd7_5
- perl-libwww-perl=6.39=pl5321hdfd78af_1
- perl-list-moreutils=0.430=pl5321hdfd78af_0
- perl-list-moreutils-xs=0.430=pl5321hec16e2b_1
- perl-lwp-mediatypes=6.04=pl5321hdfd78af_1
- perl-lwp-simple=6.39=pl5321h9ee0642_5
- perl-mime-base64=3.16=pl5321h166bdaf_0
- perl-net-http=6.22=pl5321hdfd78af_0
- perl-net-ssleay=1.92=pl5321haa6b8db_1
- perl-ntlm=1.09=pl5321hdfd78af_5
- perl-parent=0.238=pl5321hd8ed1ab_0
- perl-pathtools=3.75=pl5321h166bdaf_0
- perl-scalar-list-utils=1.63=pl5321h166bdaf_0
- perl-socket=2.027=pl5321hec16e2b_3
- perl-time-local=1.30=pl5321hdfd78af_0
- perl-timedate=2.33=pl5321hdfd78af_2
- perl-try-tiny=0.31=pl5321ha770c72_0
- perl-types-serialiser=1.01=pl5321hdfd78af_0
- perl-uri=5.12=pl5321hdfd78af_0
- perl-url-encode=0.03=pl5321h9ee0642_0
- perl-www-robotrules=6.02=pl5321hdfd78af_4
- pillow=9.2.0=py38ha3b2c9c_2
- pip=22.2.2=pyhd8ed1ab_0
- pixman=0.40.0=h36c2ea0_0
- popt=1.16=h0b475e3_2002
- pplacer=1.1.alpha19=h9ee0642_2
- prodigal=2.6.3=hec16e2b_4
- pthread-stubs=0.4=h36c2ea0_1001
- pyparsing=3.0.9=pyhd8ed1ab_0
- pysam=0.19.1=py38h8bf8b8d_0
- python=3.8.13=h582c2e5_0_cpython
- python-dateutil=2.8.2=pyhd8ed1ab_0
- python_abi=3.8=2_cp38
- pytz=2022.2.1=pyhd8ed1ab_0
- r-base=4.1.3=ha8c3e7c_2
- r-bitops=1.0_7=r41h06615bd_0
- r-catools=1.18.2=r41h7525677_0
- r-gplots=3.1.3=r41hc72bb7e_0
- r-gtools=3.9.3=r41h06615bd_0
- r-kernsmooth=2.23_20=r41h742201e_0
- readline=8.1.2=h0f457ee_0
- rsync=3.2.3=hfa40b15_4
- scipy=1.9.1=py38hea3f02b_0
- sed=4.8=he412f7d_0
- setuptools=65.3.0=pyhd8ed1ab_1
- six=1.16.0=pyh6c4a22f_0
- spades=3.14.1=h95f258a_2
- sqlite=3.39.3=h4ff8645_0
- sysroot_linux-64=2.12=he073ed8_15
- tar=1.34=ha1f6473_0
- tk=8.6.12=h27826a3_0
- tktable=2.10=hb7b940f_3
- trimmomatic=0.39=hdfd78af_2
- unicodedata2=14.0.0=py38h0a891b7_1
- wget=1.20.3=ha56f1ee_1
- wheel=0.37.1=pyhd8ed1ab_0
- xorg-fixesproto=5.0=h7f98852_1002
- xorg-inputproto=2.3.2=h7f98852_1002
- xorg-kbproto=1.0.7=h7f98852_1002
- xorg-libice=1.0.10=h7f98852_0
- xorg-libsm=1.2.3=hd9c2040_1000
- xorg-libx11=1.7.2=h7f98852_0
- xorg-libxau=1.0.9=h7f98852_0
- xorg-libxdmcp=1.1.3=h7f98852_0
- xorg-libxext=1.3.4=h7f98852_1
- xorg-libxfixes=5.0.3=h7f98852_1004
- xorg-libxi=1.7.10=h7f98852_0
- xorg-libxrender=0.9.10=h7f98852_1003
- xorg-libxt=1.2.1=h7f98852_2
- xorg-libxtst=1.2.3=h7f98852_1002
- xorg-recordproto=1.14.2=h7f98852_1002
- xorg-renderproto=0.11.1=h7f98852_1002
- xorg-xextproto=7.3.0=h7f98852_1002
- xorg-xproto=7.0.31=h7f98852_1007
- xxhash=0.8.0=h7f98852_3
- xz=5.2.6=h166bdaf_0
- zlib=1.2.12=h166bdaf_3
- zstd=1.5.2=h6239696_4