From a6c5d4a78f18f55d3f9b5b8b2f7fafe5c41d4599 Mon Sep 17 00:00:00 2001 From: Mary Llewellyn Date: Tue, 26 Mar 2024 09:10:24 +0000 Subject: [PATCH] alan fill data page Co-authored-by: Alan O'Callaghan --- _extras/data.md | 16 ++++++++-------- 1 file changed, 8 insertions(+), 8 deletions(-) diff --git a/_extras/data.md b/_extras/data.md index 708ebb7b..c725628f 100644 --- a/_extras/data.md +++ b/_extras/data.md @@ -73,15 +73,15 @@ Gene expression measurements for over 9000 genes in over 3000 mouse cortex and h - colData(data): individual cell-level information - tissue: tissue type - group #: group number - - total mRNA mol: - - well: - - sex: sex - - age: age - - diameter: + - total mRNA mol: total number of observed mRNA molecules corresponding to this cell's unique barcode identifier + - well: the well that this cell's cDNA was stored in during processing + - sex: sex of the donor animal + - age: age of the donor animal + - diameter: estimated cell diameter - cell_id: cell identifier - - level1class: - - level2class: - - sizeFactor: + - level1class: a cluster label identified using a mix of computational techniques and manual annotation + - level2class: a cluster label identified using a mix of computational techniques and manual annotation + - sizeFactor: estimate size factor calculated for scaling normalisation using (e.g., **`scran`**). {% include links.md %}