From 95ea63f00fc11f0b42695bcbbf0298adf6a79b61 Mon Sep 17 00:00:00 2001
From: GitHub Actions <actions@github.com>
Date: Wed, 4 Oct 2023 10:27:08 +0000
Subject: [PATCH] site deploy

Auto-generated via {sandpaper}
Source  : 96d531b41b3e781ce2fdd1efdc7c503fcce43994
Branch  : md-outputs
Author  : GitHub Actions <actions@github.com>
Time    : 2023-10-04 10:26:54 +0000
Message : markdown source builds

Auto-generated via {sandpaper}
Source  : eb0f837ec41c06bf9a1e7a67ae920b2e7db608a1
Branch  : main
Author  : Aleksandra Nenadic <a.nenadic@manchester.ac.uk>
Time    : 2023-10-04 10:25:40 +0000
Message : Update 02-tools.md
---
 02-tools.html            | 35 ++++++++++++++++++++++++++---------
 aio.html                 | 28 +++++++++++++++++++++++++---
 instructor/02-tools.html | 35 ++++++++++++++++++++++++++---------
 instructor/aio.html      | 28 +++++++++++++++++++++++++---
 md5sum.txt               |  2 +-
 5 files changed, 103 insertions(+), 25 deletions(-)

diff --git a/02-tools.html b/02-tools.html
index d1ac145b..8c2d4ec1 100644
--- a/02-tools.html
+++ b/02-tools.html
@@ -156,13 +156,21 @@ <h2 class="accordion-header chapters" id="flush-headingEleven">
 <div class="accordion accordion-flush" id="accordionFlushcurrent">
   <div class="accordion-item">
     <div class="accordion-header" id="flush-headingcurrent">
+      <button class="accordion-button" type="button" data-bs-toggle="collapse" data-bs-target="#flush-collapsecurrent" aria-expanded="true" aria-controls="flush-collapsecurrent">
         <span class="visually-hidden">Current Chapter</span>
         <span class="current-chapter">
         2. Tools and practices for research software development
         </span>
-      
+      </button>
     </div><!--/div.accordion-header-->
         
+    <div id="flush-collapsecurrent" class="accordion-collapse collapse show" aria-labelledby="flush-headingcurrent" data-bs-parent="#accordionFlushcurrent">
+      <div class="accordion-body">
+        <ul><li><a href="#acknowledgements">Acknowledgements</a></li>
+<li><a href="#furhter-reading">Furhter reading</a></li>
+        </ul></div><!--/div.accordion-body-->
+    </div><!--/div.accordion-collapse-->
+        
   </div><!--/div.accordion-item-->
 </div><!--/div.accordion-flush-->
 
@@ -287,7 +295,7 @@ <h2 class="accordion-header" id="flush-headingTwelve">
       </div>
       <hr></nav><main id="main-content" class="main-content"><div class="container lesson-content">
         <h1>Tools and practices for research software development</h1>
-        <p> Last updated on 2023-10-03 | 
+        <p> Last updated on 2023-10-04 | 
         
         <a href="https://github.com/softwaresaved/fair-research-software/edit/main/episodes/02-tools.md" class="external-link">Edit this page <i aria-hidden="true" data-feather="edit"></i></a></p>
         
@@ -320,8 +328,20 @@ <h3 class="card-title">Objectives</h3>
 </div>
 </div>
 </div>
-<p>Content goes here.</p>
-<div id="keypoints1" class="callout keypoints">
+<p>Content of the episode goes here.</p>
+<section id="acknowledgements"><h2 class="section-heading">Acknowledgements<a class="anchor" aria-label="anchor" href="#acknowledgements"></a>
+</h2>
+<hr class="half-width"><p>The content of this episode was inspired / heavily borrowed from the
+following resources:</p>
+<ul><li>…</li>
+<li>…</li>
+</ul></section><section id="furhter-reading"><h2 class="section-heading">Furhter reading<a class="anchor" aria-label="anchor" href="#furhter-reading"></a>
+</h2>
+<hr class="half-width"><p>We recommend the following resources for some additional reading on
+the topic of this episode:</p>
+<ul><li>…</li>
+<li>…</li>
+</ul><div id="keypoints1" class="callout keypoints">
 <div class="callout-square">
 <i class="callout-icon" data-feather="key"></i>
 </div>
@@ -337,10 +357,7 @@ <h3 class="callout-title">Keypoints<a class="anchor" aria-label="anchor" href="#
 Place links that you need to refer to multiple times across pages here. Delete
 any links that you are not going to use. 
  -->
-
-
-
-      </div> <!-- / div.lesson-content -->
+</section></div> <!-- / div.lesson-content -->
     </main><!-- / main#main-content.main-content --><nav class="bottom-pagination mx-md-4" aria-label="Previous and Next Chapter"><div class="d-block d-sm-block d-md-none">
         <a class="chapter-link" href="01-introduction.html"><i aria-hidden="true" class="small-arrow" data-feather="arrow-left"></i>Previous</a>
         <a class="chapter-link float-end" href="03-version-control.html">Next<i aria-hidden="true" class="small-arrow" data-feather="arrow-right"></i></a>
@@ -399,7 +416,7 @@ <h3 class="callout-title">Keypoints<a class="anchor" aria-label="anchor" href="#
   "url": "https://softwaresaved.github.io/fair-research-software/02-tools.html",
   "identifier": "https://softwaresaved.github.io/fair-research-software/02-tools.html",
   "dateCreated": "2023-10-03",
-  "dateModified": "2023-10-03",
+  "dateModified": "2023-10-04",
   "datePublished": "2023-10-04"
 }
 
diff --git a/aio.html b/aio.html
index 0858311f..d46c411e 100644
--- a/aio.html
+++ b/aio.html
@@ -414,7 +414,7 @@ <h3 class="callout-title">Keypoints<a class="anchor" aria-label="anchor" href="#
  -->
 </section></section><section id="aio-02-tools"><p>Content from <a href="02-tools.html">Tools and practices for research software development</a></p>
 <hr>
-<p> Last updated on 2023-10-03 | 
+<p> Last updated on 2023-10-04 | 
         
         <a href="https://github.com/softwaresaved/fair-research-software/edit/main/episodes/02-tools.md" class="external-link">Edit this page <i aria-hidden="true" data-feather="edit"></i></a></p>
 <div class="text-end">
@@ -445,7 +445,24 @@ <h3 class="card-title">Objectives</h3>
 </div>
 </div>
 </div>
-<p>Content goes here.</p>
+<p>Content of the episode goes here.</p>
+<section id="acknowledgements"><h2 class="section-heading">Acknowledgements<a class="anchor" aria-label="anchor" href="#acknowledgements"></a>
+</h2>
+<hr class="half-width">
+<p>The content of this episode was inspired / heavily borrowed from the
+following resources:</p>
+<ul>
+<li>…</li>
+<li>…</li>
+</ul></section><section id="furhter-reading"><h2 class="section-heading">Furhter reading<a class="anchor" aria-label="anchor" href="#furhter-reading"></a>
+</h2>
+<hr class="half-width">
+<p>We recommend the following resources for some additional reading on
+the topic of this episode:</p>
+<ul>
+<li>…</li>
+<li>…</li>
+</ul>
 <div id="keypoints1" class="callout keypoints">
 <div class="callout-square">
 <i class="callout-icon" data-feather="key"></i>
@@ -459,7 +476,12 @@ <h3 class="callout-title">Keypoints<a class="anchor" aria-label="anchor" href="#
 </ul>
 </div>
 </div>
-</div></section><section id="aio-03-version-control"><p>Content from <a href="03-version-control.html">Version control</a></p>
+</div>
+<!-- 
+Place links that you need to refer to multiple times across pages here. Delete
+any links that you are not going to use. 
+ -->
+</section></section><section id="aio-03-version-control"><p>Content from <a href="03-version-control.html">Version control</a></p>
 <hr>
 <p> Last updated on 2023-10-03 | 
         
diff --git a/instructor/02-tools.html b/instructor/02-tools.html
index 488a8e45..ea5d923c 100644
--- a/instructor/02-tools.html
+++ b/instructor/02-tools.html
@@ -155,13 +155,21 @@ <h2 class="accordion-header chapters" id="flush-headingEleven">
 <div class="accordion accordion-flush" id="accordionFlushcurrent">
   <div class="accordion-item">
     <div class="accordion-header" id="flush-headingcurrent">
+      <button class="accordion-button" type="button" data-bs-toggle="collapse" data-bs-target="#flush-collapsecurrent" aria-expanded="true" aria-controls="flush-collapsecurrent">
         <span class="visually-hidden">Current Chapter</span>
         <span class="current-chapter">
         2. Tools and practices for research software development
         </span>
-      
+      </button>
     </div><!--/div.accordion-header-->
         
+    <div id="flush-collapsecurrent" class="accordion-collapse collapse show" aria-labelledby="flush-headingcurrent" data-bs-parent="#accordionFlushcurrent">
+      <div class="accordion-body">
+        <ul><li><a href="#acknowledgements">Acknowledgements</a></li>
+<li><a href="#furhter-reading">Furhter reading</a></li>
+        </ul></div><!--/div.accordion-body-->
+    </div><!--/div.accordion-collapse-->
+        
   </div><!--/div.accordion-item-->
 </div><!--/div.accordion-flush-->
 
@@ -286,7 +294,7 @@ <h2 class="accordion-header" id="flush-headingTwelve">
       </div>
       <hr></nav><main id="main-content" class="main-content"><div class="container lesson-content">
         <h1>Tools and practices for research software development</h1>
-        <p> Last updated on 2023-10-03 | 
+        <p> Last updated on 2023-10-04 | 
         
         <a href="https://github.com/softwaresaved/fair-research-software/edit/main/episodes/02-tools.md" class="external-link">Edit this page <i aria-hidden="true" data-feather="edit"></i></a></p>
         
@@ -321,8 +329,20 @@ <h3 class="card-title">Objectives</h3>
 </div>
 </div>
 </div>
-<p>Content goes here.</p>
-<div id="keypoints1" class="callout keypoints">
+<p>Content of the episode goes here.</p>
+<section id="acknowledgements"><h2 class="section-heading">Acknowledgements<a class="anchor" aria-label="anchor" href="#acknowledgements"></a>
+</h2>
+<hr class="half-width"><p>The content of this episode was inspired / heavily borrowed from the
+following resources:</p>
+<ul><li>…</li>
+<li>…</li>
+</ul></section><section id="furhter-reading"><h2 class="section-heading">Furhter reading<a class="anchor" aria-label="anchor" href="#furhter-reading"></a>
+</h2>
+<hr class="half-width"><p>We recommend the following resources for some additional reading on
+the topic of this episode:</p>
+<ul><li>…</li>
+<li>…</li>
+</ul><div id="keypoints1" class="callout keypoints">
 <div class="callout-square">
 <i class="callout-icon" data-feather="key"></i>
 </div>
@@ -338,10 +358,7 @@ <h3 class="callout-title">Keypoints<a class="anchor" aria-label="anchor" href="#
 Place links that you need to refer to multiple times across pages here. Delete
 any links that you are not going to use. 
  -->
-
-
-
-      </div> <!-- / div.lesson-content -->
+</section></div> <!-- / div.lesson-content -->
     </main><!-- / main#main-content.main-content --><nav class="bottom-pagination mx-md-4" aria-label="Previous and Next Chapter"><div class="d-block d-sm-block d-md-none">
         <a class="chapter-link" href="../instructor/01-introduction.html"><i aria-hidden="true" class="small-arrow" data-feather="arrow-left"></i>Previous</a>
         <a class="chapter-link float-end" href="../instructor/03-version-control.html">Next<i aria-hidden="true" class="small-arrow" data-feather="arrow-right"></i></a>
@@ -400,7 +417,7 @@ <h3 class="callout-title">Keypoints<a class="anchor" aria-label="anchor" href="#
   "url": "https://softwaresaved.github.io/fair-research-software/instructor/02-tools.html",
   "identifier": "https://softwaresaved.github.io/fair-research-software/instructor/02-tools.html",
   "dateCreated": "2023-10-03",
-  "dateModified": "2023-10-03",
+  "dateModified": "2023-10-04",
   "datePublished": "2023-10-04"
 }
 
diff --git a/instructor/aio.html b/instructor/aio.html
index e4380980..791f8894 100644
--- a/instructor/aio.html
+++ b/instructor/aio.html
@@ -413,7 +413,7 @@ <h3 class="callout-title">Keypoints<a class="anchor" aria-label="anchor" href="#
  -->
 </section></section><section id="aio-02-tools"><p>Content from <a href="02-tools.html">Tools and practices for research software development</a></p>
 <hr>
-<p> Last updated on 2023-10-03 | 
+<p> Last updated on 2023-10-04 | 
         
         <a href="https://github.com/softwaresaved/fair-research-software/edit/main/episodes/02-tools.md" class="external-link">Edit this page <i aria-hidden="true" data-feather="edit"></i></a></p>
 <p>Estimated time <i aria-hidden="true" data-feather="clock"></i> 90 minutes </p>
@@ -445,7 +445,24 @@ <h3 class="card-title">Objectives</h3>
 </div>
 </div>
 </div>
-<p>Content goes here.</p>
+<p>Content of the episode goes here.</p>
+<section id="acknowledgements"><h2 class="section-heading">Acknowledgements<a class="anchor" aria-label="anchor" href="#acknowledgements"></a>
+</h2>
+<hr class="half-width">
+<p>The content of this episode was inspired / heavily borrowed from the
+following resources:</p>
+<ul>
+<li>…</li>
+<li>…</li>
+</ul></section><section id="furhter-reading"><h2 class="section-heading">Furhter reading<a class="anchor" aria-label="anchor" href="#furhter-reading"></a>
+</h2>
+<hr class="half-width">
+<p>We recommend the following resources for some additional reading on
+the topic of this episode:</p>
+<ul>
+<li>…</li>
+<li>…</li>
+</ul>
 <div id="keypoints1" class="callout keypoints">
 <div class="callout-square">
 <i class="callout-icon" data-feather="key"></i>
@@ -459,7 +476,12 @@ <h3 class="callout-title">Keypoints<a class="anchor" aria-label="anchor" href="#
 </ul>
 </div>
 </div>
-</div></section><section id="aio-03-version-control"><p>Content from <a href="03-version-control.html">Version control</a></p>
+</div>
+<!-- 
+Place links that you need to refer to multiple times across pages here. Delete
+any links that you are not going to use. 
+ -->
+</section></section><section id="aio-03-version-control"><p>Content from <a href="03-version-control.html">Version control</a></p>
 <hr>
 <p> Last updated on 2023-10-03 | 
         
diff --git a/md5sum.txt b/md5sum.txt
index 651e2725..b83c9a5b 100644
--- a/md5sum.txt
+++ b/md5sum.txt
@@ -6,7 +6,7 @@
 "index.md" "adbc83202e65d6f430a3efc6f067b003" "site/built/index.md" "2023-10-03"
 "links.md" "7a355efc63aadccc942bfc450478d2c5" "site/built/links.md" "2023-10-03"
 "episodes/01-introduction.md" "8f4ee2c373c56d46acfd0d9fba718788" "site/built/01-introduction.md" "2023-10-04"
-"episodes/02-tools.md" "13988053943091a3357ba8878d8e7d76" "site/built/02-tools.md" "2023-10-03"
+"episodes/02-tools.md" "2f6c9e51ea301ba4062f01602f659d7f" "site/built/02-tools.md" "2023-10-04"
 "episodes/03-version-control.md" "bb16c3c7b6d1a969013fb76726d0ce0a" "site/built/03-version-control.md" "2023-10-03"
 "episodes/04-code-readability.md" "95a7631165f92353a8094b35b9f9ee29" "site/built/04-code-readability.md" "2023-10-03"
 "episodes/05-code-testing.md" "f3e91c3995a5a63db7e80fd529017850" "site/built/05-code-testing.md" "2023-10-03"