diff --git a/learners/setup.md b/learners/setup.md index c7ef27b..ff8fa44 100644 --- a/learners/setup.md +++ b/learners/setup.md @@ -2,16 +2,14 @@ title: Setup --- -- Install R, RStudio and packages (see below). - ### R and RStudio -- R and RStudio are separate downloads and installations. R is a programming language and collection of software that implements that language. RStudio is a graphical integrated development environment +R and RStudio are separate downloads and installations. R is a programming language and collection of software that implements that language. RStudio is a graphical integrated development environment (IDE) that makes using R easier and more interactive. You need to install R before you install RStudio. After installing both programs, you will need to install some R libraries from within RStudio. If you need to install R and/or RStudio, there are platform-specific installation instructions in the [Introduction to Bioconductor module](https://carpentries-incubator.github.io/bioc-intro/). -### For everyone +### Package installation After installing R and RStudio, you need to install some packages that will be used during the workshop. We will also learn about package installation during @@ -29,11 +27,5 @@ BiocManager::install(c("AUCell", "batchelor", "BiocStyle", Ncpus = 4) ``` - - - +You can adjust `Ncpus` as needed for your machine.