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Error in 01 Build and Deploy Site due to installation failure of 'S4Vectors' #132

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kozo2 opened this issue Aug 22, 2024 · 0 comments
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@kozo2
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kozo2 commented Aug 22, 2024

This repo's GitHub Actions 01 Build and Deploy Site fails to install S4Vectors Bioconductor package like in
https://github.com/carpentries-incubator/bioc-intro/actions/runs/10463180742/job/28974769280#step:6:1448
(and fails to automate the build of the website).

It seems that whatever is installing the package in the action (renv?) is pulling the wrong version of S4Vectors, leading to regressions and errors:
https://github.com/carpentries-incubator/bioc-intro/actions/runs/10463180742/job/28974769280#step:6:1467

What we want to install in this environment is S4Vectors 0.42.1, not 0.38.2.

@froggleston , do you know what to write in https://github.com/carpentries-incubator/bioc-intro/blob/main/.github/workflows/sandpaper-main.yaml to control that installation?

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