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Full output #13

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lkursell opened this issue Mar 22, 2016 · 3 comments
Closed

Full output #13

lkursell opened this issue Mar 22, 2016 · 3 comments

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@lkursell
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Include the full output of the average count of each bug from each source in the sink sample
@wdwvt1
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wdwvt1 commented Apr 17, 2016

The QIIME forum recently had a request by a user for full output. Evidence that we need to find a way to get this working

@lkursell
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@wdwvt1 Yes, I think a full out put will be necessary. At the moment we can't track which OTUs are the most important for providing contribution density to sinks. I think the best way to return this would be a dataframe of features X sinks. If I remember correctly, the SourceTracker1 returned the full output, but it didn't specify the observation ID - they got renumbered to V1, V2,..., Vn. Therefore lets make sure that the observation IDs get reported.

@wdwvt1
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wdwvt1 commented Jul 15, 2016

Resolved in PR #51.

@wdwvt1 wdwvt1 closed this as completed Aug 11, 2016
@wdwvt1 wdwvt1 mentioned this issue Aug 18, 2016
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@wdwvt1 @lkursell